F323779

General Info

Members Datasets Scaffolds Average Seq Length
213 126 426 404

Family's Representative Sequence

Representative Sequence 3300005459|Ga0068867_100174434|Ga0068867_1001744342
Length 432
Sequence VSVNVPIRSSRKSKTETASSAADKPAKKPFLPYGRQLIDEDDIAAVSSALRGDLLTTGPLVEKFERLLARTVGARDAVACSNGTAALYIAARALGIGPGHTVVVPSITFLATASAPHLAGAEIVFADVDPESGLMRTQDLEAALGRAPQKRADAVFPVHYAGQSCDMGAIAEIARAKNMKIVEDAAHALGTVWRETDGAVQSVGANEFSDLTIFSFHPVKTVAMGEGGAISTNDPELLRRLKQARNHGITREPLEFKRVDASFDSGGTVNPWYYELEAPGFNWRISDINCALGLSQLSKLQRFINARRVLAECYDELLAHLAPLVRPLKRDPHSLTAWHIYPVRIDFEEAGVERAEVMRGLAADGIGTQVHYIGVQPLPGADSYYASTLTLPLYPAMSEADVVRVVVALKKQLLGLKKKPPARSDITSRTTS

Samples

Sample ID Description Type Environment
1 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
18 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
19 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
20 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
21 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
23 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
24 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
33 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
34 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
57 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
60 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
61 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
62 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
63 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
64 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
65 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
66 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
67 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
70 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
71 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
72 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
76 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
77 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
78 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
79 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
80 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
81 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
82 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
83 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
84 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
85 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
86 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
87 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
88 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
101 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
102 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
103 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
104 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
105 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
106 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
107 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
108 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
109 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
110 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
111 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
112 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
114 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
115 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
116 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
117 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
118 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
119 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
120 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
121 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
122 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
123 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
124 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
125 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
126 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.1
Nodule 0
Rhizoplane 0
Rhizosphere 90.61
Stem 0
Stem Tuber 0
Unclassified 4.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068867_100174434 3300005459 Bacteria 1705
2 rootH2_10003154 3300003320 Bacteria 36753
3 rootH2_10178736 3300003320 Bacteria 2247
4 Ga0070658_10006353 3300005327 Bacteria 9578
5 Ga0070658_10026350 3300005327 Bacteria 4664
6 Ga0070680_100000317 3300005336 Bacteria 32367
7 Ga0070660_100001001 3300005339 Bacteria 18970
8 Ga0070661_100002865 3300005344 Bacteria 11851
9 Ga0070659_100006248 3300005366 Bacteria 8610
10 Ga0070678_100158497 3300005456 Bacteria 1831
11 Ga0070681_10000002 3300005458 Bacteria 821814
12 Ga0070681_10026455 3300005458 Bacteria 5830
13 Ga0070681_10041528 3300005458 Bacteria 4610
14 Ga0070699_100148376 3300005518 Bacteria 2073
15 Ga0070679_100008010 3300005530 Bacteria 9922
16 Ga0070679_100012258 3300005530 Bacteria 8190
17 Ga0070679_100065929 3300005530 Bacteria 3609
18 Ga0070679_100230131 3300005530 Bacteria 1813
19 Ga0068853_100000169 3300005539 Bacteria 45200
20 Ga0068853_100035751 3300005539 Bacteria 4221
21 Ga0068853_100157445 3300005539 Bacteria 2047
22 Ga0070665_100039691 3300005548 Bacteria 4733
23 Ga0070665_100057805 3300005548 Bacteria 3888
24 Ga0068855_100000069 3300005563 Bacteria 124154
25 Ga0068855_100024217 3300005563 Bacteria 7266
26 Ga0068854_100039069 3300005578 Bacteria 3341
27 Ga0068852_100028922 3300005616 Bacteria 4544
28 Ga0075367_10126411 3300006178 Unclassified 1578
29 Ga0068871_100395660 3300006358 Bacteria 1230
30 Ga0068865_100099995 3300006881 Unclassified 2121
31 Ga0105240_10000055 3300009093 Bacteria 225380
32 Ga0105240_10019469 3300009093 Bacteria 9067
33 Ga0105240_10039858 3300009093 Bacteria 6011
34 Ga0105240_10056747 3300009093 Bacteria 4898
35 Ga0105240_10073178 3300009093 Bacteria 4232
36 Ga0105240_10206646 3300009093 Bacteria 2298
37 Ga0105240_10237314 3300009093 Bacteria 2115
38 Ga0114129_10453508 3300009147 Unclassified 1681
39 Ga0105241_10119329 3300009174 Bacteria 2122
40 Ga0105242_10412212 3300009176 Bacteria 1264
41 Ga0105248_10000001 3300009177 Bacteria 1881304
42 Ga0105237_10069771 3300009545 Bacteria 3509
43 Ga0105238_10147671 3300009551 Bacteria 2327
44 Ga0105239_10008712 3300010375 Bacteria 11482
45 Ga0105239_10016613 3300010375 Bacteria 8136
46 Ga0105239_10065274 3300010375 Bacteria 3997
47 Ga0105239_10245592 3300010375 Bacteria 2010
48 Ga0105239_10345540 3300010375 Bacteria 1679
49 Ga0157370_10008199 3300013104 Bacteria 11287
50 Ga0157369_10011263 3300013105 Bacteria 10160
51 Ga0157378_10172830 3300013297 Bacteria 2027
52 Ga0157372_10006121 3300013307 Bacteria 12785
53 Ga0157379_10032646 3300014968 Bacteria 4642
54 Ga0157376_10031127 3300014969 Unclassified 4269
55 Ga0213874_10000920 3300021377 Bacteria 5999
56 Ga0213876_10000405 3300021384 Bacteria 36218
57 Ga0207705_10000058 3300025909 Bacteria 155967
58 Ga0207654_10056721 3300025911 Bacteria 2273
59 Ga0207707_10000002 3300025912 Bacteria 1142054
60 Ga0207707_10000263 3300025912 Bacteria 56613
61 Ga0207695_10000012 3300025913 Bacteria 840961
62 Ga0207695_10026933 3300025913 Bacteria 6408
63 Ga0207695_10068831 3300025913 Bacteria 3625
64 Ga0207695_10117720 3300025913 Bacteria 2629
65 Ga0207671_10060350 3300025914 Bacteria 2813
66 Ga0207660_10000358 3300025917 Bacteria 29719
67 Ga0207660_10000598 3300025917 Bacteria 24324
68 Ga0207657_10000305 3300025919 Bacteria 51999
69 Ga0207649_10000026 3300025920 Bacteria 177395
70 Ga0207652_10000505 3300025921 Bacteria 39729
71 Ga0207652_10000679 3300025921 Bacteria 33231
72 Ga0207694_10000006 3300025924 Bacteria 631109
73 Ga0207690_10010118 3300025932 Bacteria 5602
74 Ga0207706_10233291 3300025933 Bacteria 1609
75 Ga0207686_10003896 3300025934 Bacteria 8001
76 Ga0207704_10181611 3300025938 Bacteria 1521
77 Ga0207711_10000001 3300025941 Bacteria 1325674
78 Ga0207667_10000026 3300025949 Bacteria 343713
79 Ga0207667_10027308 3300025949 Bacteria 6215
80 Ga0207639_10000177 3300026041 Bacteria 49899
81 Ga0207639_10019289 3300026041 Bacteria 4862
82 Ga0207639_10078177 3300026041 Bacteria 2611
83 Ga0207674_10038757 3300026116 Bacteria 4943
84 Ga0207698_10003225 3300026142 Bacteria 9797
85 Ga0207698_10108388 3300026142 Bacteria 2321
86 Ga0268266_10012171 3300028379 Bacteria 7445
87 Ga0268266_10149014 3300028379 Bacteria 2107
88 Ga0268266_10227648 3300028379 Bacteria 1716
89 Ga0265334_10007776 3300028573 Bacteria 4590
90 Ga0265318_10000457 3300028577 Bacteria 30611
91 Ga0265338_10000011 3300028800 Bacteria 433370
92 Ga0265330_10028579 3300031235 Bacteria 2511
93 Ga0265332_10013265 3300031238 Bacteria 3655
94 Ga0265320_10002082 3300031240 Bacteria 14091
95 Ga0265325_10000002 3300031241 Bacteria 396758
96 Ga0265325_10000163 3300031241 Bacteria 47195
97 Ga0265325_10051845 3300031241 Bacteria 2108
98 Ga0265329_10022034 3300031242 Bacteria 2135
99 Ga0265340_10000016 3300031247 Bacteria 94019
100 Ga0265340_10000602 3300031247 Bacteria 20076
101 Ga0265340_10002201 3300031247 Bacteria 11159
102 Ga0265340_10021102 3300031247 Bacteria 3341
103 Ga0265339_10000709 3300031249 Bacteria 25841
104 Ga0265339_10004498 3300031249 Bacteria 9501
105 Ga0265339_10011712 3300031249 Bacteria 5385
106 Ga0265331_10000008 3300031250 Bacteria 324311
107 Ga0265331_10000009 3300031250 Bacteria 314950
108 Ga0265331_10028664 3300031250 Bacteria 2783
109 Ga0265327_10000036 3300031251 Bacteria 312827
110 Ga0265327_10064808 3300031251 Bacteria 1850
111 Ga0265316_10003589 3300031344 Bacteria 15641
112 Ga0265316_10179385 3300031344 Bacteria 1577
113 Ga0265313_10000280 3300031595 Bacteria 55923
114 Ga0265313_10002567 3300031595 Bacteria 15507
115 Ga0265313_10008988 3300031595 Bacteria 6553
116 Ga0265313_10071713 3300031595 Unclassified 1594
117 Ga0265314_10003469 3300031711 Bacteria 15229
118 Ga0265314_10007289 3300031711 Bacteria 9608
119 Ga0265314_10010133 3300031711 Bacteria 7897
120 Ga0265314_10030830 3300031711 Bacteria 3965
121 Ga0265314_10047475 3300031711 Bacteria 3021
122 Ga0265314_10056519 3300031711 Bacteria 2701
123 Ga0265314_10091547 3300031711 Bacteria 1979
124 Ga0265314_10103814 3300031711 Unclassified 1821
125 Ga0265314_10114069 3300031711 Bacteria 1712
126 Ga0265342_10010705 3300031712 Bacteria 6336
127 Ga0265342_10066935 3300031712 Bacteria 2103
128 Ga0307516_10013810 3300031730 Bacteria 8576
129 Ga0395900_0102445 3300037418 Bacteria 2941
130 Ga0395898_0046436 3300037466 Bacteria 4266
131 Ga0436365_1513507 3300039437 Bacteria 68714
132 Ga0436363_1369660 3300039450 Bacteria 6765
133 Ga0451577_0041216 3300042876 Bacteria 4145
134 Ga0453684_0000015 3300044712 Bacteria 969198
135 Ga0453684_0023296 3300044712 Bacteria 9132
136 Ga0495630_0079582 3300046517 Bacteria 2472
137 Ga0495643_0017723 3300046522 Bacteria 4156
138 Ga0495587_0036391 3300046536 Bacteria 2961
139 Ga0495645_0018634 3300046543 Bacteria 4988
140 Ga0495622_0078896 3300046557 Unclassified 1516
141 Ga0495668_0001232 3300046616 Bacteria 25728
142 Ga0495658_0083605 3300046683 Bacteria 1878
143 Ga0495589_0094793 3300046794 Bacteria 1448
144 Ga0495672_0000485 3300047320 Bacteria 46894
145 Ga0501031_0018153 3300049568 Bacteria 4577
146 Ga0501032_0019955 3300049569 Bacteria 4678
147 Ga0501033_0004753 3300049570 Bacteria 10866
148 Ga0501033_0073148 3300049570 Bacteria 2516
149 Ga0501034_0010185 3300049571 Bacteria 9808
150 Ga0501034_0164638 3300049571 Bacteria 2187
151 Ga0501036_0014693 3300049572 Bacteria 6527
152 Ga0501036_0033016 3300049572 Bacteria 4376
153 Ga0501037_0055772 3300049573 Bacteria 2889
154 Ga0501038_0008049 3300049574 Bacteria 9703
155 Ga0501038_0038755 3300049574 Bacteria 4171
156 Ga0501039_0029535 3300049575 Bacteria 4223
157 Ga0501040_0023978 3300049576 Bacteria 4093
158 Ga0501046_0005626 3300049580 Bacteria 11184
159 Ga0501047_0049524 3300049581 Bacteria 4057
160 Ga0501047_0120438 3300049581 Bacteria 2506
161 Ga0501047_0159373 3300049581 Bacteria 2129
162 Ga0501048_0072976 3300049582 Bacteria 2422
163 Ga0501067_0000181 3300049583 Bacteria 35717
164 Ga0501067_0001299 3300049583 Bacteria 13547
165 Ga0501068_0038279 3300049584 Bacteria 2873
166 Ga0501068_0094606 3300049584 Unclassified 1847
167 Ga0501069_0011912 3300049585 Bacteria 4614
168 Ga0501069_0153441 3300049585 Bacteria 1324
169 Ga0501070_0000017 3300049586 Bacteria 173127
170 Ga0501070_0031785 3300049586 Bacteria 4422
171 Ga0501071_0078605 3300049587 Bacteria 2411
172 Ga0501074_0046954 3300049590 Bacteria 3122
173 Ga0501074_0055830 3300049590 Unclassified 2846
174 Ga0501076_0008354 3300049592 Bacteria 7587
175 Ga0501076_0137896 3300049592 Bacteria 1981
176 Ga0501077_0026546 3300049593 Bacteria 3675
177 Ga0501079_0006832 3300049741 Bacteria 8590
178 Ga0501079_0042808 3300049741 Bacteria 3496
179 Ga0501079_0092346 3300049741 Bacteria 2345
180 Ga0501079_0105932 3300049741 Bacteria 2182
181 Ga0501079_0185519 3300049741 Bacteria 1624
182 Ga0501080_0003605 3300049742 Bacteria 13635
183 Ga0501080_0008474 3300049742 Bacteria 9317
184 Ga0501080_0068763 3300049742 Bacteria 3294
185 Ga0501080_0123257 3300049742 Bacteria 2401
186 Ga0501080_0220308 3300049742 Bacteria 1737
187 Ga0501081_0011418 3300049743 Bacteria 5811
188 Ga0501083_0163465 3300049744 Bacteria 1456
189 Ga0501035_0019831 3300049822 Bacteria 6177
190 Ga0501035_0061183 3300049822 Bacteria 3351
191 Ga0501035_0143982 3300049822 Bacteria 2071
192 Ga0501044_0002656 3300049823 Bacteria 20336
193 Ga0501044_0003942 3300049823 Bacteria 16632
194 Ga0501044_0010021 3300049823 Bacteria 10296
195 nmdc:mga08y16_67890_c1 3300050511 Bacteria 3719
196 Ga0500635_0000084 3300053080 Bacteria 61861
197 Ga0500635_0012816 3300053080 Bacteria 2419
198 Ga0500595_010554 3300053119 Bacteria 3664
199 Ga0500614_000898 3300053123 Bacteria 7498
200 Ga0500655_003432 3300053133 Bacteria 2863
201 Ga0500559_0007612 3300053136 Bacteria 4781
202 Ga0500559_0010384 3300053136 Bacteria 4000
203 Ga0500636_0104763 3300053177 Bacteria 1604
204 Ga0500637_0002953 3300053178 Bacteria 7699
205 Ga0500645_036702 3300053730 Bacteria 1458
206 Ga0500596_006116 3300053735 Bacteria 2062
207 Ga0500601_003486 3300053737 Bacteria 1706
208 Ga0501084_0004285 3300054114 Bacteria 11616
209 Ga0501084_0034262 3300054114 Bacteria 4246
210 Ga0501084_0078044 3300054114 Bacteria 2776
211 Ga0501084_0246290 3300054114 Bacteria 1509
212 Ga0501082_0061446 3300060353 Bacteria 3234
213 Ga0501082_0122142 3300060353 Bacteria 2258
214 Ga0068867_100174434
215 rootH2_10003154
216 rootH2_10178736
217 Ga0070658_10006353
218 Ga0070658_10026350
219 Ga0070680_100000317
220 Ga0070660_100001001
221 Ga0070661_100002865
222 Ga0070659_100006248
223 Ga0070678_100158497
224 Ga0070681_10000002
225 Ga0070681_10026455
226 Ga0070681_10041528
227 Ga0070699_100148376
228 Ga0070679_100008010
229 Ga0070679_100012258
230 Ga0070679_100065929
231 Ga0070679_100230131
232 Ga0068853_100000169
233 Ga0068853_100035751
234 Ga0068853_100157445
235 Ga0070665_100039691
236 Ga0070665_100057805
237 Ga0068855_100000069
238 Ga0068855_100024217
239 Ga0068854_100039069
240 Ga0068852_100028922
241 Ga0075367_10126411
242 Ga0068871_100395660
243 Ga0068865_100099995
244 Ga0105240_10000055
245 Ga0105240_10019469
246 Ga0105240_10039858
247 Ga0105240_10056747
248 Ga0105240_10073178
249 Ga0105240_10206646
250 Ga0105240_10237314
251 Ga0114129_10453508
252 Ga0105241_10119329
253 Ga0105242_10412212
254 Ga0105248_10000001
255 Ga0105237_10069771
256 Ga0105238_10147671
257 Ga0105239_10008712
258 Ga0105239_10016613
259 Ga0105239_10065274
260 Ga0105239_10245592
261 Ga0105239_10345540
262 Ga0157370_10008199
263 Ga0157369_10011263
264 Ga0157378_10172830
265 Ga0157372_10006121
266 Ga0157379_10032646
267 Ga0157376_10031127
268 Ga0213874_10000920
269 Ga0213876_10000405
270 Ga0207705_10000058
271 Ga0207654_10056721
272 Ga0207707_10000002
273 Ga0207707_10000263
274 Ga0207695_10000012
275 Ga0207695_10026933
276 Ga0207695_10068831
277 Ga0207695_10117720
278 Ga0207671_10060350
279 Ga0207660_10000358
280 Ga0207660_10000598
281 Ga0207657_10000305
282 Ga0207649_10000026
283 Ga0207652_10000505
284 Ga0207652_10000679
285 Ga0207694_10000006
286 Ga0207690_10010118
287 Ga0207706_10233291
288 Ga0207686_10003896
289 Ga0207704_10181611
290 Ga0207711_10000001
291 Ga0207667_10000026
292 Ga0207667_10027308
293 Ga0207639_10000177
294 Ga0207639_10019289
295 Ga0207639_10078177
296 Ga0207674_10038757
297 Ga0207698_10003225
298 Ga0207698_10108388
299 Ga0268266_10012171
300 Ga0268266_10149014
301 Ga0268266_10227648
302 Ga0265334_10007776
303 Ga0265318_10000457
304 Ga0265338_10000011
305 Ga0265330_10028579
306 Ga0265332_10013265
307 Ga0265320_10002082
308 Ga0265325_10000002
309 Ga0265325_10000163
310 Ga0265325_10051845
311 Ga0265329_10022034
312 Ga0265340_10000016
313 Ga0265340_10000602
314 Ga0265340_10002201
315 Ga0265340_10021102
316 Ga0265339_10000709
317 Ga0265339_10004498
318 Ga0265339_10011712
319 Ga0265331_10000008
320 Ga0265331_10000009
321 Ga0265331_10028664
322 Ga0265327_10000036
323 Ga0265327_10064808
324 Ga0265316_10003589
325 Ga0265316_10179385
326 Ga0265313_10000280
327 Ga0265313_10002567
328 Ga0265313_10008988
329 Ga0265313_10071713
330 Ga0265314_10003469
331 Ga0265314_10007289
332 Ga0265314_10010133
333 Ga0265314_10030830
334 Ga0265314_10047475
335 Ga0265314_10056519
336 Ga0265314_10091547
337 Ga0265314_10103814
338 Ga0265314_10114069
339 Ga0265342_10010705
340 Ga0265342_10066935
341 Ga0307516_10013810
342 Ga0395900_0102445
343 Ga0395898_0046436
344 Ga0436365_1513507
345 Ga0436363_1369660
346 Ga0451577_0041216
347 Ga0453684_0000015
348 Ga0453684_0023296
349 Ga0495630_0079582
350 Ga0495643_0017723
351 Ga0495587_0036391
352 Ga0495645_0018634
353 Ga0495622_0078896
354 Ga0495668_0001232
355 Ga0495658_0083605
356 Ga0495589_0094793
357 Ga0495672_0000485
358 Ga0501031_0018153
359 Ga0501032_0019955
360 Ga0501033_0004753
361 Ga0501033_0073148
362 Ga0501034_0010185
363 Ga0501034_0164638
364 Ga0501036_0014693
365 Ga0501036_0033016
366 Ga0501037_0055772
367 Ga0501038_0008049
368 Ga0501038_0038755
369 Ga0501039_0029535
370 Ga0501040_0023978
371 Ga0501046_0005626
372 Ga0501047_0049524
373 Ga0501047_0120438
374 Ga0501047_0159373
375 Ga0501048_0072976
376 Ga0501067_0000181
377 Ga0501067_0001299
378 Ga0501068_0038279
379 Ga0501068_0094606
380 Ga0501069_0011912
381 Ga0501069_0153441
382 Ga0501070_0000017
383 Ga0501070_0031785
384 Ga0501071_0078605
385 Ga0501074_0046954
386 Ga0501074_0055830
387 Ga0501076_0008354
388 Ga0501076_0137896
389 Ga0501077_0026546
390 Ga0501079_0006832
391 Ga0501079_0042808
392 Ga0501079_0092346
393 Ga0501079_0105932
394 Ga0501079_0185519
395 Ga0501080_0003605
396 Ga0501080_0008474
397 Ga0501080_0068763
398 Ga0501080_0123257
399 Ga0501080_0220308
400 Ga0501081_0011418
401 Ga0501083_0163465
402 Ga0501035_0019831
403 Ga0501035_0061183
404 Ga0501035_0143982
405 Ga0501044_0002656
406 Ga0501044_0003942
407 Ga0501044_0010021
408 nmdc:mga08y16_67890_c1
409 Ga0500635_0000084
410 Ga0500635_0012816
411 Ga0500595_010554
412 Ga0500614_000898
413 Ga0500655_003432
414 Ga0500559_0007612
415 Ga0500559_0010384
416 Ga0500636_0104763
417 Ga0500637_0002953
418 Ga0500645_036702
419 Ga0500596_006116
420 Ga0500601_003486
421 Ga0501084_0004285
422 Ga0501084_0034262
423 Ga0501084_0078044
424 Ga0501084_0246290
425 Ga0501082_0061446
426 Ga0501082_0122142

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

36

410

0.92

PF00155

Aminotran_1_2

Aminotransferase class I and II

39

255

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
8su6-assembly1.cif.gz_B crystal structure of arnb transferase from klebsiella aerogenes (lattice translocation disorder, p1 form2) 0.968 17 408
3dr4-assembly1.cif.gz_A gdp-perosamine synthase k186a mutant from caulobacter crescentus with bound sugar ligand 0.9676 20 410
1mdo-assembly1.cif.gz_A crystal structure of arnb aminotransferase with pyridomine 5' phosphate 0.9641 17 411
8snj-assembly3.cif.gz_E crystal structure of arnb transferase from klebsiella aerogenes (lattice translocation disorder, p1 form) 0.9619 17 409
1mdx-assembly1.cif.gz_A crystal structure of arnb transferase with pyridoxal 5' phosphate 0.9617 17 411
ID Description Score Start End Superfamily
1mdxA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.948 17 284 3.40.640.10
4lc3B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9436 17 283 3.40.640.10
2fn6A01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9407 11 284 3.40.640.10
1mdxA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9403 17 284 3.40.640.10
2fn6A01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.937 11 284 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A833GD03-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9859 17 141 GO:0000271
GO:0008483
GO:0030170
AF-A0A2E2E2Y0-F1-model_v4 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.982 16 410 GO:0000271
GO:0008483
GO:0030170
AF-A0A2D8LZ36-F1-model_v4 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.9804 18 411 GO:0000271
GO:0008483
GO:0030170
AF-A0A2D8LZ36-F1-model_v4 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.9753 18 411 GO:0000271
GO:0008483
GO:0030170
AF-A0A7V2SZM0-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9724 16 369 GO:0000271
GO:0008483
GO:0030170

Map