F324053

General Info

Members Datasets Scaffolds Average Seq Length
213 105 426 892

Family's Representative Sequence

Representative Sequence 3300013296|Ga0157374_10015830|Ga0157374_100158302
Length 1007
Sequence MKHLILIFSLSFFAVVAAHAQTTHEVDGTVTDSAKSHITEAALKLISDRDSVVVVTDTAGKFVFPAVKSNKFTITILARGYQPKARRYALDTTNKTAILDPIILIRSAAGLAPIAARSQDGRELKVTLPGATVKLVSDKGDSTVTVTDGNGKFAFPAIKSNKFTLTVSSLGYQTIKRRFGLDTSNKTAILDPIVLKSDAKLLTGVTITAVIPVTVKEDTVEYKASAYKVRENAPVEDLIKKLPGVDVDVNGNITTQGKQVTKVRINGKDFMGGDVQSATKNLPADIVENIQMIDDYGDQANLTGIKTGEPDKIMNITIRKDRNYGYSLQATAGDGEDALPASQGIPDQNRYLGSLNYFHFSGDQQIAVLGSINNTQNGITDAHSLGANFRDQWGKYLSVYGSYSFADNTTSTNTINQQQNLNPVNPSVQNQHSNEIDRTTNHRFTWNMEYKPDTVNYLKITPTFSYAGTNTSDNERDSKIGRDSLIYNSLSTGHSQAPAFGMIALYNRRLGHRRNLSFNVNFNSTTSNQFQNPTYDYIKGLPTSPTYQLINTHSRTNTISTNVSYIEPLGKTTYLEFTYAFSHAITVNNKSTDTSTFFVDTNGPLTTPLFDDSLSTDFNYTFTTHRIGLNFREVQKKYNFTVGVAALPAYLDGYSPLTGLSTHESNFNVIPTARFVYNFSRSQLFSVNYNGSSSSPSFTQLQPTTDFSNALYPVQGNKDLKPQFTNNFSIRYNNFSFTTGDVFFVNASFQQINNQVVTNTITFPRRFPRDTSFNNTILTRYLNADGYYTINGGLTYGKPFDNRKFTLYLRGNVAYSNNVGYLTSIDSSTFAENTQKNIAKNLVFTPQVQFRIDITDVMDAQVMTNYAINHTSNTVNNPLTNGTANIRTWNVGLNGKQYIMKDWTFSYDYTKSTNYGYSAGVPVTNPNLLNVYLERRFLKHNAATIRFGVFDVFNQNTGFSATPSASSFTETQTNRLSRYYLATFTLRLQKFAGKAPTQNFDNGPSGD

Samples

Sample ID Description Type Environment
1 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
6 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
43 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
44 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
45 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
46 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
64 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
65 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
66 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
67 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
68 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
69 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
70 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
71 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
72 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
77 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
78 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
79 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
80 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
81 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
82 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
83 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
84 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
85 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
86 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
87 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
88 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
89 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
90 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
91 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
92 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
93 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
94 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
95 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
96 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
97 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
98 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
99 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
100 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
101 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
102 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
103 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
104 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
105 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.31
Metatranscriptomes 0
Isolates 4.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.92
Nodule 0
Rhizoplane 0.47
Rhizosphere 78.87
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157374_10015830 3300013296 Bacteria 6626
2 JGI24737J22298_10000928 3300001990 Bacteria 10406
3 JGI24737J22298_10004092 3300001990 Bacteria 5095
4 JGI24735J21928_10000093 3300002067 Bacteria 33623
5 JGI24735J21928_10001407 3300002067 Bacteria 8496
6 JGI25162J39368_1000056 3300002737 Bacteria 146755
7 JGI25162J39368_1000121 3300002737 Bacteria 85899
8 JGI25162J39368_1000949 3300002737 Bacteria 18576
9 JGI25164J39214_1001096 3300002772 Bacteria 7809
10 JGI25165J46597_1000802 3300003214 Bacteria 23746
11 rootH1_10004798 3300003316 Bacteria 24370
12 rootH1_10058571 3300003316 Bacteria 8852
13 rootH2_10000579 3300003320 Bacteria 178428
14 rootH2_10009034 3300003320 Bacteria 9569
15 rootH2_10035752 3300003320 Bacteria 3467
16 rootL2_10116735 3300003322 Bacteria 3896
17 rootH1_10013902 3300003323 Bacteria 30115
18 rootH1_10015111 3300003323 Bacteria 6828
19 rootH1_10105518 3300003323 Bacteria 12397
20 rootH1_10153477 3300003323 Bacteria 3377
21 rootH1_10174854 3300003323 Bacteria 3139
22 Ga0065714_10065704 3300005288 Bacteria 8799
23 Ga0070658_10000032 3300005327 Bacteria 147726
24 Ga0070676_10000138 3300005328 Bacteria 28188
25 Ga0070660_100012437 3300005339 Bacteria 6077
26 Ga0070673_100001614 3300005364 Bacteria 13328
27 Ga0070659_100000076 3300005366 Bacteria 77320
28 Ga0070659_100000407 3300005366 Bacteria 32639
29 Ga0070663_100004121 3300005455 Bacteria 8492
30 Ga0070662_100000033 3300005457 Bacteria 78191
31 Ga0070681_10001717 3300005458 Bacteria 19598
32 Ga0068867_100001746 3300005459 Bacteria 15135
33 Ga0070679_100007680 3300005530 Bacteria 10095
34 Ga0070665_100000017 3300005548 Bacteria 448013
35 Ga0070665_100000020 3300005548 Bacteria 389687
36 Ga0068855_100000162 3300005563 Bacteria 85736
37 Ga0068855_100002852 3300005563 Bacteria 21248
38 Ga0068855_100013589 3300005563 Bacteria 9817
39 Ga0068855_100013726 3300005563 Bacteria 9766
40 Ga0068854_100010332 3300005578 Bacteria 6049
41 Ga0068854_100030843 3300005578 Bacteria 3721
42 Ga0068856_100000764 3300005614 Bacteria 34928
43 Ga0068856_100001362 3300005614 Bacteria 25687
44 Ga0068852_100000757 3300005616 Bacteria 21263
45 Ga0075366_10000174 3300006195 Bacteria 27797
46 Ga0097621_100000766 3300006237 Bacteria 22510
47 Ga0068871_100001132 3300006358 Bacteria 17876
48 Ga0068865_100000584 3300006881 Bacteria 20457
49 Ga0105240_10000083 3300009093 Bacteria 192934
50 Ga0105240_10000726 3300009093 Bacteria 60233
51 Ga0105240_10006237 3300009093 Bacteria 17541
52 Ga0105240_10015150 3300009093 Bacteria 10493
53 Ga0105241_10000284 3300009174 Bacteria 37721
54 Ga0105241_10011596 3300009174 Bacteria 6462
55 Ga0105241_10015752 3300009174 Bacteria 5539
56 Ga0105237_10000138 3300009545 Bacteria 102411
57 Ga0105237_10001225 3300009545 Bacteria 34194
58 Ga0105237_10001513 3300009545 Bacteria 30535
59 Ga0105237_10002427 3300009545 Bacteria 23144
60 Ga0105237_10004486 3300009545 Bacteria 16132
61 Ga0105237_10005253 3300009545 Bacteria 14656
62 Ga0105237_10005979 3300009545 Bacteria 13634
63 Ga0105237_10012177 3300009545 Bacteria 9072
64 Ga0105237_10013491 3300009545 Bacteria 8565
65 Ga0105237_10026943 3300009545 Bacteria 5871
66 Ga0105237_10037819 3300009545 Bacteria 4876
67 Ga0105237_10045491 3300009545 Bacteria 4416
68 Ga0105238_10040163 3300009551 Bacteria 4741
69 Ga0105238_10043390 3300009551 Bacteria 4551
70 Ga0105239_10000008 3300010375 Bacteria 376925
71 Ga0105239_10000017 3300010375 Bacteria 290760
72 Ga0105239_10000021 3300010375 Bacteria 259369
73 Ga0105239_10000130 3300010375 Bacteria 105894
74 Ga0105239_10000132 3300010375 Bacteria 105380
75 Ga0105239_10000355 3300010375 Bacteria 67024
76 Ga0105239_10001688 3300010375 Bacteria 29112
77 Ga0105239_10002873 3300010375 Bacteria 21542
78 Ga0105239_10008850 3300010375 Bacteria 11398
79 Ga0105239_10015309 3300010375 Bacteria 8499
80 Ga0105239_10018348 3300010375 Bacteria 7735
81 Ga0105239_10066798 3300010375 Bacteria 3950
82 Ga0157373_10000063 3300013100 Bacteria 95201
83 Ga0157373_10000545 3300013100 Bacteria 29511
84 Ga0157373_10004809 3300013100 Bacteria 10161
85 Ga0157371_10000155 3300013102 Bacteria 100230
86 Ga0157371_10002781 3300013102 Bacteria 16416
87 Ga0157369_10000301 3300013105 Bacteria 66010
88 Ga0157374_10000122 3300013296 Bacteria 70398
89 Ga0157374_10001528 3300013296 Bacteria 19476
90 Ga0163162_10000032 3300013306 Bacteria 156609
91 Ga0163162_10000071 3300013306 Bacteria 94831
92 Ga0163162_10002519 3300013306 Bacteria 17321
93 Ga0157372_10000037 3300013307 Bacteria 172444
94 Ga0157372_10000249 3300013307 Bacteria 59656
95 Ga0157375_10032068 3300013308 Bacteria 4979
96 Ga0207427_100071 3300025231 Bacteria 159974
97 Ga0207427_100125 3300025231 Bacteria 96142
98 Ga0209437_100008 3300025233 Bacteria 921142
99 Ga0209437_100017 3300025233 Bacteria 694471
100 Ga0209437_100021 3300025233 Bacteria 646400
101 Ga0209437_100124 3300025233 Bacteria 199789
102 Ga0209026_1000377 3300025250 Bacteria 40941
103 Ga0209026_1000472 3300025250 Bacteria 30801
104 Ga0209233_1000024 3300025261 Bacteria 695418
105 Ga0209233_1000035 3300025261 Bacteria 568478
106 Ga0209233_1001254 3300025261 Bacteria 10199
107 Ga0207647_10000135 3300025904 Bacteria 58247
108 Ga0207647_10000146 3300025904 Bacteria 56177
109 Ga0207647_10000159 3300025904 Bacteria 53276
110 Ga0207645_10000502 3300025907 Bacteria 32417
111 Ga0207705_10000032 3300025909 Bacteria 224376
112 Ga0207654_10012026 3300025911 Bacteria 4426
113 Ga0207695_10000127 3300025913 Bacteria 227338
114 Ga0207695_10004253 3300025913 Bacteria 19665
115 Ga0207671_10001040 3300025914 Bacteria 33728
116 Ga0207671_10001238 3300025914 Bacteria 30144
117 Ga0207671_10002013 3300025914 Bacteria 22350
118 Ga0207671_10002129 3300025914 Bacteria 21612
119 Ga0207671_10006168 3300025914 Bacteria 10771
120 Ga0207671_10008133 3300025914 Bacteria 8951
121 Ga0207671_10008653 3300025914 Bacteria 8593
122 Ga0207671_10012720 3300025914 Bacteria 6750
123 Ga0207671_10014812 3300025914 Bacteria 6143
124 Ga0207671_10022787 3300025914 Bacteria 4731
125 Ga0207657_10049480 3300025919 Bacteria 3662
126 Ga0207694_10050050 3300025924 Bacteria 3235
127 Ga0207690_10000049 3300025932 Bacteria 113589
128 Ga0207706_10000007 3300025933 Bacteria 211081
129 Ga0207704_10000138 3300025938 Bacteria 39263
130 Ga0207667_10000356 3300025949 Bacteria 62183
131 Ga0207667_10000426 3300025949 Bacteria 56781
132 Ga0207667_10001209 3300025949 Bacteria 32290
133 Ga0207667_10023949 3300025949 Bacteria 6716
134 Ga0207667_10031301 3300025949 Bacteria 5744
135 Ga0207640_10014441 3300025981 Bacteria 4549
136 Ga0207702_10000042 3300026078 Bacteria 150673
137 Ga0207702_10001767 3300026078 Bacteria 21263
138 Ga0207648_10000495 3300026089 Bacteria 43912
139 Ga0207648_10005803 3300026089 Bacteria 12367
140 Ga0207683_10001591 3300026121 Bacteria 20448
141 Ga0268266_10000018 3300028379 Bacteria 569141
142 Ga0268266_10000195 3300028379 Bacteria 105788
143 Ga0307517_10000335 3300028786 Bacteria 81908
144 Ga0307515_10000144 3300028794 Bacteria 170910
145 Ga0307515_10000235 3300028794 Bacteria 136714
146 Ga0307515_10002585 3300028794 Bacteria 39041
147 Ga0307515_10005522 3300028794 Bacteria 25593
148 Ga0316177_1116921 3300030731 Bacteria 31477
149 Ga0316176_1123546 3300030732 Bacteria 6269
150 Ga0316183_1054866 3300030742 Bacteria 36207
151 Ga0316181_1126086 3300030744 Bacteria 12112
152 Ga0265327_10000142 3300031251 Bacteria 157436
153 Ga0307507_10000097 3300033179 Bacteria 139761
154 Ga0307507_10000217 3300033179 Bacteria 109884
155 Ga0307510_10000510 3300033180 Bacteria 38591
156 Ga0395899_0000011 3300037312 Bacteria 521331
157 Ga0395899_0000027 3300037312 Bacteria 337387
158 Ga0395899_0000280 3300037312 Bacteria 66580
159 Ga0395900_0000288 3300037418 Bacteria 75715
160 Ga0395900_0059729 3300037418 Bacteria 3925
161 Ga0395905_0000986 3300037471 Bacteria 36496
162 Ga0395905_0000987 3300037471 Bacteria 36490
163 Ga0395901_0065677 3300038443 Bacteria 3778
164 Ga0395901_0093230 3300038443 Bacteria 3153
165 Ga0466966_0004379 3300044684 Bacteria 9312
166 Ga0495650_0000268 3300046471 Bacteria 99891
167 Ga0495585_0000034 3300046492 Bacteria 143120
168 Ga0495585_0000604 3300046492 Bacteria 33594
169 Ga0495585_0001059 3300046492 Bacteria 22684
170 Ga0495583_0027651 3300046506 Bacteria 2797
171 Ga0495606_0000009 3300046507 Bacteria 306313
172 Ga0495606_0008022 3300046507 Bacteria 9276
173 Ga0495606_0014478 3300046507 Bacteria 6151
174 Ga0495606_0024364 3300046507 Bacteria 4362
175 Ga0495610_0001196 3300046512 Bacteria 23476
176 Ga0495616_0003783 3300046513 Bacteria 9650
177 Ga0495648_0001819 3300046524 Bacteria 20533
178 Ga0495648_0009691 3300046524 Bacteria 7424
179 Ga0495633_0000004 3300046558 Bacteria 370781
180 Ga0495633_0000029 3300046558 Bacteria 200381
181 Ga0495633_0003657 3300046558 Bacteria 10154
182 Ga0495668_0000011 3300046616 Bacteria 472186
183 Ga0495668_0000012 3300046616 Bacteria 458817
184 Ga0495625_0000007 3300046660 Bacteria 565749
185 Ga0495625_0001539 3300046660 Bacteria 27555
186 Ga0495625_0010308 3300046660 Bacteria 7748
187 Ga0495661_0007999 3300046665 Bacteria 7341
188 Ga0495649_0000007 3300046694 Bacteria 518037
189 Ga0495660_0003234 3300046810 Bacteria 10123
190 Ga0495660_0015241 3300046810 Bacteria 4442
191 Ga0495687_000354 3300047443 Bacteria 58314
192 Ga0495687_017835 3300047443 Bacteria 3525
193 Ga0495686_0001050 3300047472 Bacteria 33105
194 Ga0495686_0001146 3300047472 Bacteria 31183
195 Ga0495686_0001562 3300047472 Bacteria 24407
196 Ga0495686_0023523 3300047472 Bacteria 4063
197 Ga0495686_0027748 3300047472 Bacteria 3694
198 Ga0495686_0028443 3300047472 Bacteria 3641
199 Ga0495682_0007654 3300049460 Bacteria 4287
200 nmdc:mga0k408_123_c1 3300050493 Bacteria 38185
201 Ga0500608_001440 3300053122 Bacteria 8514
202 Ga0500618_000251 3300053125 Bacteria 42567
203 Ga0500622_0001995 3300053156 Bacteria 15284
204 2599480772 2599185184 Bacteria 6430550
205 2842905362 2842903701 Bacteria 6986368
206 2852626399 2852623160 Bacteria 4376875
207 2884934851 2884933994 Bacteria 4535041
208 2919439924 2919437846 Bacteria 6199444
209 2919442637 2919437846 Bacteria 6199444
210 2928081664 2928078545 Bacteria 6534839
211 2928150308 2928147474 Bacteria 6512076
212 2932085132 2932082852 Bacteria 6563563
213 2977234628 2977232053 Bacteria 5485925
214 Ga0157374_10015830
215 JGI24737J22298_10000928
216 JGI24737J22298_10004092
217 JGI24735J21928_10000093
218 JGI24735J21928_10001407
219 JGI25162J39368_1000056
220 JGI25162J39368_1000121
221 JGI25162J39368_1000949
222 JGI25164J39214_1001096
223 JGI25165J46597_1000802
224 rootH1_10004798
225 rootH1_10058571
226 rootH2_10000579
227 rootH2_10009034
228 rootH2_10035752
229 rootL2_10116735
230 rootH1_10013902
231 rootH1_10015111
232 rootH1_10105518
233 rootH1_10153477
234 rootH1_10174854
235 Ga0065714_10065704
236 Ga0070658_10000032
237 Ga0070676_10000138
238 Ga0070660_100012437
239 Ga0070673_100001614
240 Ga0070659_100000076
241 Ga0070659_100000407
242 Ga0070663_100004121
243 Ga0070662_100000033
244 Ga0070681_10001717
245 Ga0068867_100001746
246 Ga0070679_100007680
247 Ga0070665_100000017
248 Ga0070665_100000020
249 Ga0068855_100000162
250 Ga0068855_100002852
251 Ga0068855_100013589
252 Ga0068855_100013726
253 Ga0068854_100010332
254 Ga0068854_100030843
255 Ga0068856_100000764
256 Ga0068856_100001362
257 Ga0068852_100000757
258 Ga0075366_10000174
259 Ga0097621_100000766
260 Ga0068871_100001132
261 Ga0068865_100000584
262 Ga0105240_10000083
263 Ga0105240_10000726
264 Ga0105240_10006237
265 Ga0105240_10015150
266 Ga0105241_10000284
267 Ga0105241_10011596
268 Ga0105241_10015752
269 Ga0105237_10000138
270 Ga0105237_10001225
271 Ga0105237_10001513
272 Ga0105237_10002427
273 Ga0105237_10004486
274 Ga0105237_10005253
275 Ga0105237_10005979
276 Ga0105237_10012177
277 Ga0105237_10013491
278 Ga0105237_10026943
279 Ga0105237_10037819
280 Ga0105237_10045491
281 Ga0105238_10040163
282 Ga0105238_10043390
283 Ga0105239_10000008
284 Ga0105239_10000017
285 Ga0105239_10000021
286 Ga0105239_10000130
287 Ga0105239_10000132
288 Ga0105239_10000355
289 Ga0105239_10001688
290 Ga0105239_10002873
291 Ga0105239_10008850
292 Ga0105239_10015309
293 Ga0105239_10018348
294 Ga0105239_10066798
295 Ga0157373_10000063
296 Ga0157373_10000545
297 Ga0157373_10004809
298 Ga0157371_10000155
299 Ga0157371_10002781
300 Ga0157369_10000301
301 Ga0157374_10000122
302 Ga0157374_10001528
303 Ga0163162_10000032
304 Ga0163162_10000071
305 Ga0163162_10002519
306 Ga0157372_10000037
307 Ga0157372_10000249
308 Ga0157375_10032068
309 Ga0207427_100071
310 Ga0207427_100125
311 Ga0209437_100008
312 Ga0209437_100017
313 Ga0209437_100021
314 Ga0209437_100124
315 Ga0209026_1000377
316 Ga0209026_1000472
317 Ga0209233_1000024
318 Ga0209233_1000035
319 Ga0209233_1001254
320 Ga0207647_10000135
321 Ga0207647_10000146
322 Ga0207647_10000159
323 Ga0207645_10000502
324 Ga0207705_10000032
325 Ga0207654_10012026
326 Ga0207695_10000127
327 Ga0207695_10004253
328 Ga0207671_10001040
329 Ga0207671_10001238
330 Ga0207671_10002013
331 Ga0207671_10002129
332 Ga0207671_10006168
333 Ga0207671_10008133
334 Ga0207671_10008653
335 Ga0207671_10012720
336 Ga0207671_10014812
337 Ga0207671_10022787
338 Ga0207657_10049480
339 Ga0207694_10050050
340 Ga0207690_10000049
341 Ga0207706_10000007
342 Ga0207704_10000138
343 Ga0207667_10000356
344 Ga0207667_10000426
345 Ga0207667_10001209
346 Ga0207667_10023949
347 Ga0207667_10031301
348 Ga0207640_10014441
349 Ga0207702_10000042
350 Ga0207702_10001767
351 Ga0207648_10000495
352 Ga0207648_10005803
353 Ga0207683_10001591
354 Ga0268266_10000018
355 Ga0268266_10000195
356 Ga0307517_10000335
357 Ga0307515_10000144
358 Ga0307515_10000235
359 Ga0307515_10002585
360 Ga0307515_10005522
361 Ga0316177_1116921
362 Ga0316176_1123546
363 Ga0316183_1054866
364 Ga0316181_1126086
365 Ga0265327_10000142
366 Ga0307507_10000097
367 Ga0307507_10000217
368 Ga0307510_10000510
369 Ga0395899_0000011
370 Ga0395899_0000027
371 Ga0395899_0000280
372 Ga0395900_0000288
373 Ga0395900_0059729
374 Ga0395905_0000986
375 Ga0395905_0000987
376 Ga0395901_0065677
377 Ga0395901_0093230
378 Ga0466966_0004379
379 Ga0495650_0000268
380 Ga0495585_0000034
381 Ga0495585_0000604
382 Ga0495585_0001059
383 Ga0495583_0027651
384 Ga0495606_0000009
385 Ga0495606_0008022
386 Ga0495606_0014478
387 Ga0495606_0024364
388 Ga0495610_0001196
389 Ga0495616_0003783
390 Ga0495648_0001819
391 Ga0495648_0009691
392 Ga0495633_0000004
393 Ga0495633_0000029
394 Ga0495633_0003657
395 Ga0495668_0000011
396 Ga0495668_0000012
397 Ga0495625_0000007
398 Ga0495625_0001539
399 Ga0495625_0010308
400 Ga0495661_0007999
401 Ga0495649_0000007
402 Ga0495660_0003234
403 Ga0495660_0015241
404 Ga0495687_000354
405 Ga0495687_017835
406 Ga0495686_0001050
407 Ga0495686_0001146
408 Ga0495686_0001562
409 Ga0495686_0023523
410 Ga0495686_0027748
411 Ga0495686_0028443
412 Ga0495682_0007654
413 nmdc:mga0k408_123_c1
414 Ga0500608_001440
415 Ga0500618_000251
416 Ga0500622_0001995
417 2599480772
418 2842905362
419 2852626399
420 2884934851
421 2919439924
422 2919442637
423 2928081664
424 2928150308
425 2932085132
426 2977234628

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13620

CarboxypepD_reg

Carboxypeptidase regulatory-like domain

122

196

0.88

PF14905

OMP_b-brl_3

Outer membrane protein beta-barrel family

508

830

0.81

PF13715

CarbopepD_reg_2

CarboxypepD_reg-like domain

122

207

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
4v4c-assembly3.cif.gz_F crystal structure of pyrogallol-phloroglucinol transhydroxylase from pelobacter acidigallici 0.8422 24 105
4u3s-assembly1.cif.gz_B crystal structure of coh3scab-xdoc_m1scaa complex: a n-terminal interface mutant of type ii cohesin-x-dockerin complex from acetivibrio cellulolyticus 0.7642 23 107
7bvx-assembly1.cif.gz_A crystal structure of c-terminal fragment of pilus adhesin spac from lactobacillus rhamnosus gg-iodide soaked 0.698 22 111
4fl4-assembly4.cif.gz_L scaffoldin conformation and dynamics revealed by a ternary complex from the clostridium thermocellum cellulosome 0.6865 17 107
2pcd-assembly1.cif.gz_N-2 structure of protocatechuate 3,4-dioxygenase from pseudomonas aeruginosa at 2.15 angstroms resolution 0.673 15 105
ID Description Score Start End Superfamily
af_F1RAC0_1040_1118_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8707 26 108 2.60.40.1120
af_P42787_763_851_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8574 26 108 2.60.40.1120
af_F1RAC0_1040_1118_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8509 26 108 2.60.40.1120
af_E7FFQ7_1118_1203_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8472 27 112 2.60.40.1120
af_Q92376_420_824_3.40.850.10 Alpha Beta;3-Layer(aba) Sandwich;Kinesin;Kinesin motor domain 0.8424 549 575 3.40.850.10
ID Description Score Start End GO Terms
AF-A0A498E953-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.8321 17 113 GO:0004180
AF-A0A6I3N2F1-F1-model_v4 OmpA family protein 0.8254 21 110 GO:0009279
AF-A0A7C6D3I1-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.8186 24 121 GO:0004180
GO:0016020
GO:0030246
AF-A0A2N5YMZ0-F1-model_v4 OmpA-like domain-containing protein 0.8119 18 107 GO:0009279
AF-A0A537JQE4-F1-model_v4 Outer membrane protein beta-barrel domain-containing protein 0.7964 460 896

Map