F324164

General Info

Members Datasets Scaffolds Average Seq Length
213 141 198 377

Family's Representative Sequence

Representative Sequence 3300026116|Ga0207674_10135471|Ga0207674_101354712
Length 408
Sequence LTKYVATLIKILILPPRKNRHILIMNYPNAITSKLPNVGTTIFTVMSKMAADNNAINLSQGFPDFDSNEELIGLVTKYMKAGKNQYAPMAGLMELREVIAQKTEYLYSAKYHPETEITITAGATQAIYTAISAIVREDDEVIVFDPAYDSYQPAIELNGGKAIHVKLKAPNYSINWEDVKKVVSRRTKMIIINTPHNPTGSIMTADDMAKLERITKGTDIIIVSDEVYEHIIFDGYEHQSVARFPKLAERSFIVSSFGKTFHATGWKIGYCTAPENLMAEFRKAHQFIVFCVNAPIQYALADFLKTKENYLGLGSFYQKKRDLFIQSIKGSNFEFEPSCGTYFQLLRYKKISSEKDTDFAVRLTKEFGVASIPVSVFYNNKNDDKVLRFCFAKREETIEKAAAILKKI

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
3 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
4 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
5 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
6 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
7 2891633521 Azoarcus rhizosphaerae CC-YHH848 Isolate Rhizosphere
8 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
9 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
10 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
11 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
12 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
13 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
14 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
15 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
16 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
17 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
18 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
19 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
20 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
21 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
22 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
23 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
24 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
25 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
26 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
27 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
28 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
29 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
30 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
31 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
32 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
33 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
34 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
35 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
38 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
39 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
40 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
41 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
42 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
46 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
49 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
50 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
70 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
71 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
72 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
97 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
98 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
99 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
100 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
101 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
102 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
103 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
104 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
109 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
110 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
114 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
115 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
116 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
117 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
118 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
119 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
120 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
121 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
124 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
125 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
126 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
127 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
128 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
129 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
130 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
131 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
132 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
133 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
136 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
137 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
138 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
139 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
140 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
141 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.49
Metatranscriptomes 0
Isolates 7.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.98
Nodule 0
Rhizoplane 0.47
Rhizosphere 81.69
Stem 0
Stem Tuber 0
Unclassified 9.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10000062 3300001989 Bacteria 29944
2 JGI24739J22299_10016377 3300001989 Bacteria 2683
3 JGI24737J22298_10000564 3300001990 Bacteria 12998
4 JGI24735J21928_10000002 3300002067 Bacteria 624895
5 JGI25162J39368_1000283 3300002737 Bacteria 47953
6 JGI25164J39214_1001420 3300002772 Bacteria 5650
7 JGI25165J46597_1002335 3300003214 Bacteria 6393
8 rootH1_10015783 3300003316 Bacteria 13207
9 rootH1_10015783 3300003323 Bacteria 28436
10 rootH1_10046151 3300003316 Bacteria 4807
11 rootH2_10121725 3300003320 Bacteria 6621
12 rootH2_10135544 3300003320 Bacteria 6928
13 rootL2_10027551 3300003322 Bacteria 8632
14 rootL2_10132494 3300003322 Bacteria 5484
15 rootL2_10232185 3300003322 Bacteria 3378
16 rootH1_10006785 3300003323 Bacteria 51850
17 rootH1_10044529 3300003323 Bacteria 12446
18 rootH1_10219122 3300003323 Bacteria 2546
19 Ga0065714_10073426 3300005288 Bacteria 3189
20 Ga0070658_10000019 3300005327 Bacteria 194742
21 Ga0070658_10055013 3300005327 Bacteria 3232
22 Ga0070658_10222911 3300005327 Unclassified 1595
23 Ga0070676_10045021 3300005328 Bacteria 2569
24 Ga0070683_100075233 3300005329 Bacteria 3155
25 Ga0068869_100105822 3300005334 Unclassified 2134
26 Ga0070660_100009183 3300005339 Bacteria 6944
27 Ga0070660_100040655 3300005339 Bacteria 3540
28 Ga0070689_100121864 3300005340 Bacteria 2083
29 Ga0070671_100036511 3300005355 Bacteria 4075
30 Ga0070671_100036644 3300005355 Bacteria 4068
31 Ga0070659_100001374 3300005366 Bacteria 17526
32 Ga0070667_100104416 3300005367 Unclassified 2451
33 Ga0070663_100007521 3300005455 Bacteria 6636
34 Ga0070685_10033199 3300005466 Bacteria 2897
35 Ga0070679_100141586 3300005530 Bacteria 2384
36 Ga0068853_100007176 3300005539 Bacteria 8919
37 Ga0070672_100074235 3300005543 Bacteria 2712
38 Ga0070686_100018521 3300005544 Bacteria 4089
39 Ga0070665_100000003 3300005548 Bacteria 811857
40 Ga0068855_100000196 3300005563 Bacteria 78135
41 Ga0068855_100000519 3300005563 Bacteria 47297
42 Ga0068855_100082427 3300005563 Bacteria 3728
43 Ga0068855_100128120 3300005563 Bacteria 2901
44 Ga0068855_100146189 3300005563 Bacteria 2691
45 Ga0068855_100207364 3300005563 Bacteria 2204
46 Ga0070664_100019975 3300005564 Bacteria 5515
47 Ga0068854_100128949 3300005578 Bacteria 1929
48 Ga0068856_100000249 3300005614 Bacteria 58494
49 Ga0068856_100007156 3300005614 Bacteria 10880
50 Ga0068856_100062982 3300005614 Bacteria 3663
51 Ga0070702_100032943 3300005615 Bacteria 2847
52 Ga0068852_100062502 3300005616 Unclassified 3239
53 Ga0068858_100316025 3300005842 Bacteria 1492
54 Ga0075366_10002042 3300006195 Bacteria 10244
55 Ga0075366_10021867 3300006195 Bacteria 3719
56 Ga0075366_10105717 3300006195 Bacteria 1692
57 Ga0068871_100196696 3300006358 Bacteria 1739
58 Ga0075428_100215944 3300006844 Bacteria 2072
59 Ga0105240_10227211 3300009093 Bacteria 2171
60 Ga0105240_10294311 3300009093 Bacteria 1860
61 Ga0105240_10460198 3300009093 Bacteria 1422
62 Ga0111539_10036397 3300009094 Bacteria 5952
63 Ga0105242_10158860 3300009176 Bacteria 1977
64 Ga0105237_10006792 3300009545 Bacteria 12620
65 Ga0105237_10007478 3300009545 Bacteria 11951
66 Ga0105239_10000002 3300010375 Bacteria 610298
67 Ga0105239_10000440 3300010375 Bacteria 60691
68 Ga0105239_10001688 3300010375 Bacteria 29112
69 Ga0105239_10003983 3300010375 Bacteria 17892
70 Ga0157373_10000265 3300013100 Bacteria 42223
71 Ga0157371_10004387 3300013102 Bacteria 12335
72 Ga0157371_10021644 3300013102 Bacteria 4718
73 Ga0157371_10189340 3300013102 Unclassified 1473
74 Ga0157371_10201580 3300013102 Bacteria 1426
75 Ga0157370_10066971 3300013104 Bacteria 3395
76 Ga0157374_10002569 3300013296 Bacteria 15302
77 Ga0157378_10002939 3300013297 Bacteria 15154
78 Ga0157378_10005545 3300013297 Bacteria 11049
79 Ga0163162_10000058 3300013306 Bacteria 108298
80 Ga0163162_10003224 3300013306 Bacteria 15611
81 Ga0163162_10008685 3300013306 Bacteria 9887
82 Ga0163162_10313834 3300013306 Bacteria 1700
83 Ga0157372_10000001 3300013307 Bacteria 791349
84 Ga0157372_10000247 3300013307 Bacteria 59833
85 Ga0157372_10002637 3300013307 Bacteria 19415
86 Ga0157372_10005486 3300013307 Bacteria 13478
87 Ga0157375_10054491 3300013308 Bacteria 3939
88 Ga0157380_10000008 3300014326 Bacteria 154993
89 Ga0207427_100171 3300025231 Bacteria 71988
90 Ga0209437_100024 3300025233 Bacteria 592878
91 Ga0209437_100052 3300025233 Bacteria 380548
92 Ga0209129_1006781 3300025258 Bacteria 3597
93 Ga0209233_1000067 3300025261 Bacteria 380554
94 Ga0207645_10019421 3300025907 Bacteria 4454
95 Ga0207705_10000069 3300025909 Bacteria 133094
96 Ga0207705_10126236 3300025909 Bacteria 1902
97 Ga0207705_10170796 3300025909 Unclassified 1637
98 Ga0207695_10036280 3300025913 Bacteria 5331
99 Ga0207695_10098568 3300025913 Bacteria 2922
100 Ga0207695_10159957 3300025913 Bacteria 2184
101 Ga0207671_10004840 3300025914 Bacteria 12682
102 Ga0207671_10032965 3300025914 Bacteria 3855
103 Ga0207662_10013013 3300025918 Bacteria 4647
104 Ga0207657_10162835 3300025919 Bacteria 1811
105 Ga0207652_10020882 3300025921 Bacteria 5399
106 Ga0207644_10002257 3300025931 Bacteria 12501
107 Ga0207690_10002302 3300025932 Bacteria 11641
108 Ga0207669_10120487 3300025937 Bacteria 1780
109 Ga0207691_10091225 3300025940 Bacteria 2730
110 Ga0207689_10178558 3300025942 Unclassified 1751
111 Ga0207661_10183759 3300025944 Bacteria 1828
112 Ga0207667_10000037 3300025949 Bacteria 297252
113 Ga0207667_10001611 3300025949 Bacteria 28382
114 Ga0207667_10062194 3300025949 Bacteria 3904
115 Ga0207667_10106866 3300025949 Bacteria 2887
116 Ga0207667_10114051 3300025949 Bacteria 2786
117 Ga0207651_10085115 3300025960 Bacteria 2293
118 Ga0207640_10109732 3300025981 Bacteria 1953
119 Ga0207703_10106154 3300026035 Bacteria 2388
120 Ga0207639_10030054 3300026041 Bacteria 3983
121 Ga0207639_10082016 3300026041 Bacteria 2556
122 Ga0207702_10003179 3300026078 Bacteria 15198
123 Ga0207702_10033619 3300026078 Bacteria 4284
124 Ga0207702_10090542 3300026078 Bacteria 2677
125 Ga0207648_10178132 3300026089 Bacteria 1881
126 Ga0207674_10135471 3300026116 Bacteria 2425
127 Ga0207698_10047364 3300026142 Unclassified 3256
128 Ga0207698_10151508 3300026142 Bacteria 2013
129 Ga0268266_10000078 3300028379 Bacteria 213632
130 Ga0307515_10000778 3300028794 Bacteria 73451
131 Ga0307515_10003029 3300028794 Bacteria 35637
132 Ga0316177_1191725 3300030731 Bacteria 8459
133 Ga0316176_1203768 3300030732 Bacteria 5201
134 Ga0265327_10000288 3300031251 Bacteria 99230
135 Ga0307509_10037891 3300031507 Bacteria 5266
136 Ga0307409_100075140 3300031995 Bacteria 2704
137 Ga0307414_10015441 3300032004 Bacteria 4609
138 Ga0307411_10001491 3300032005 Bacteria 9616
139 Ga0307507_10000010 3300033179 Bacteria 265208
140 Ga0395899_0000001 3300037312 Bacteria 1750322
141 Ga0395900_0020202 3300037418 Bacteria 6796
142 Ga0395900_0101915 3300037418 Bacteria 2949
143 Ga0395905_0000001 3300037471 Bacteria 2037079
144 Ga0395901_0025850 3300038443 Bacteria 6029
145 Ga0451577_0005243 3300042876 Bacteria 13333
146 Ga0451577_0044832 3300042876 Bacteria 3958
147 Ga0453683_0068699 3300044673 Bacteria 2215
148 Ga0466966_0034143 3300044684 Bacteria 3291
149 Ga0453684_0000401 3300044712 Bacteria 178536
150 Ga0453684_0002831 3300044712 Bacteria 40897
151 Ga0453684_0017877 3300044712 Bacteria 10941
152 Ga0453684_0239745 3300044712 Bacteria 2088
153 Ga0451576_0006049 3300045051 Bacteria 14937
154 Ga0451576_0009203 3300045051 Bacteria 11478
155 Ga0451576_0013394 3300045051 Bacteria 9176
156 Ga0495592_0032623 3300046454 Bacteria 3928
157 Ga0495638_0079308 3300046460 Bacteria 1997
158 Ga0495650_0000014 3300046471 Bacteria 581606
159 Ga0495650_0037689 3300046471 Bacteria 2102
160 Ga0495585_0000158 3300046492 Bacteria 72351
161 Ga0495585_0000902 3300046492 Bacteria 25158
162 Ga0495583_0008254 3300046506 Bacteria 6386
163 Ga0495606_0000096 3300046507 Bacteria 151500
164 Ga0495610_0009957 3300046512 Bacteria 5945
165 Ga0495616_0012273 3300046513 Bacteria 4869
166 Ga0495616_0022190 3300046513 Bacteria 3429
167 Ga0495644_0002785 3300046523 Bacteria 6928
168 Ga0495648_0022480 3300046524 Bacteria 4340
169 Ga0495609_0059525 3300046538 Bacteria 1689
170 Ga0495633_0000193 3300046558 Bacteria 77938
171 Ga0495633_0008350 3300046558 Bacteria 5846
172 Ga0495668_0000003 3300046616 Bacteria 695023
173 Ga0495634_0126591 3300046642 Bacteria 1632
174 Ga0495625_0000003 3300046660 Bacteria 686847
175 Ga0495625_0000846 3300046660 Bacteria 41815
176 Ga0495625_0001822 3300046660 Bacteria 24395
177 Ga0495625_0014208 3300046660 Bacteria 6367
178 Ga0495625_0019366 3300046660 Bacteria 5281
179 Ga0495625_0068865 3300046660 Bacteria 2487
180 Ga0495661_0004777 3300046665 Bacteria 9718
181 Ga0495661_0060896 3300046665 Bacteria 2241
182 Ga0495649_0000002 3300046694 Bacteria 1093458
183 Ga0495660_0006252 3300046810 Bacteria 7066
184 Ga0495687_001250 3300047443 Bacteria 24174
185 Ga0495686_0000367 3300047472 Bacteria 73112
186 Ga0495686_0017732 3300047472 Bacteria 4792
187 Ga0495686_0055723 3300047472 Bacteria 2471
188 Ga0495686_0097917 3300047472 Bacteria 1773
189 Ga0495678_005847 3300049459 Bacteria 6666
190 Ga0501044_0061581 3300049823 Bacteria 3839
191 nmdc:mga0k408_41_c1 3300050493 Bacteria 56836
192 nmdc:mga0k408_853_c1 3300050493 Bacteria 16768
193 nmdc:mga08y16_135068_c1 3300050511 Bacteria 2564
194 Ga0500618_000004 3300053125 Bacteria 293180
195 Ga0500642_0009699 3300053130 Bacteria 3358
196 Ga0500622_0003583 3300053156 Bacteria 10247
197 Ga0500624_001145 3300053157 Bacteria 4860
198 Ga0590075_008185 3300059424 Bacteria 2493

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300038443 Ga0395901_0025850 Ga0395901_0025850_5014_6006 330
2 3300046665 Ga0495661_0060896 Ga0495661_0060896_54_1046 330
3 3300003323 rootH1_10044529 rootH1_100445296 333
4 3300009093 Ga0105240_10460198 Ga0105240_104601982 339
5 3300010375 Ga0105239_10000002 Ga0105239_10000002458 341
6 3300005563 Ga0068855_100000196 Ga0068855_10000019661 349
7 3300025949 Ga0207667_10000037 Ga0207667_1000003760 349
8 3300005328 Ga0070676_10045021 Ga0070676_100450213 352
9 3300005340 Ga0070689_100121864 Ga0070689_1001218642 352
10 3300005367 Ga0070667_100104416 Ga0070667_1001044162 352
11 3300005466 Ga0070685_10033199 Ga0070685_100331992 352
12 3300005615 Ga0070702_100032943 Ga0070702_1000329433 352
13 3300025914 Ga0207671_10004840 Ga0207671_100048407 352
14 iso_pu_bacteria 2852627209 2852631327 359
15 3300009094 Ga0111539_10036397 Ga0111539_100363973 360
16 3300014326 Ga0157380_10000008 Ga0157380_1000000896 361
17 3300005288 Ga0065714_10073426 Ga0065714_100734262 363
18 3300005563 Ga0068855_100000519 Ga0068855_10000051916 363
19 3300009093 Ga0105240_10294311 Ga0105240_102943112 363
20 3300013100 Ga0157373_10000265 Ga0157373_100002657 363
21 3300013102 Ga0157371_10189340 Ga0157371_101893402 363
22 3300013306 Ga0163162_10008685 Ga0163162_100086859 363
23 3300025949 Ga0207667_10001611 Ga0207667_1000161115 363
24 3300025949 Ga0207667_10114051 Ga0207667_101140512 363
25 3300028794 Ga0307515_10003029 Ga0307515_100030292 363
26 3300032005 Ga0307411_10001491 Ga0307411_100014912 363
27 3300037312 Ga0395899_0000001 Ga0395899_0000001_1482869_1483960 363
28 3300037418 Ga0395900_0020202 Ga0395900_0020202_2280_3371 363
29 3300047472 Ga0495686_0017732 Ga0495686_0017732_2285_3382 363
30 3300053130 Ga0500642_0009699 Ga0500642_0009699_2251_3342 363
31 3300053156 Ga0500622_0003583 Ga0500622_0003583_5561_6652 363
32 3300010375 Ga0105239_10001688 Ga0105239_1000168816 366
33 3300025913 Ga0207695_10098568 Ga0207695_100985682 366
34 3300003322 rootL2_10232185 rootL2_102321852 367
35 3300005355 Ga0070671_100036511 Ga0070671_1000365113 367
36 3300005543 Ga0070672_100074235 Ga0070672_1000742352 367
37 3300005544 Ga0070686_100018521 Ga0070686_1000185213 367
38 3300005564 Ga0070664_100019975 Ga0070664_1000199752 367
39 3300005578 Ga0068854_100128949 Ga0068854_1001289491 367
40 3300005842 Ga0068858_100316025 Ga0068858_1003160252 367
41 3300006358 Ga0068871_100196696 Ga0068871_1001966962 367
42 3300009545 Ga0105237_10007478 Ga0105237_100074787 367
43 3300013102 Ga0157371_10021644 Ga0157371_100216443 367
44 3300013297 Ga0157378_10002939 Ga0157378_1000293915 367
45 3300013306 Ga0163162_10313834 Ga0163162_103138342 367
46 3300025907 Ga0207645_10019421 Ga0207645_100194214 367
47 3300025918 Ga0207662_10013013 Ga0207662_100130136 367
48 3300025937 Ga0207669_10120487 Ga0207669_101204872 367
49 3300025940 Ga0207691_10091225 Ga0207691_100912253 367
50 3300025960 Ga0207651_10085115 Ga0207651_100851152 367
51 3300025981 Ga0207640_10109732 Ga0207640_101097322 367
52 3300026035 Ga0207703_10106154 Ga0207703_101061542 367
53 3300026089 Ga0207648_10178132 Ga0207648_101781322 367
54 3300026142 Ga0207698_10151508 Ga0207698_101515082 367
55 3300003323 rootH1_10219122 rootH1_102191223 371
56 iso_pu_bacteria 2929177148 2929177760 374
57 iso_pu_bacteria 2977232053 2977232721 376
58 3300003322 rootL2_10027551 rootL2_100275516 377
59 3300013104 Ga0157370_10066971 Ga0157370_100669712 377
60 3300031251 Ga0265327_10000288 Ga0265327_1000028844 377
61 3300046660 Ga0495625_0068865 Ga0495625_0068865_544_1683 377
62 iso_pu_bacteria 2599185184 2599478530 377
63 iso_pu_bacteria 2840677318 2840677438 377
64 iso_pu_bacteria 2842903701 2842907700 377
65 iso_pu_bacteria 2852623160 2852623564 377
66 iso_pu_bacteria 2884933994 2884937534 377
67 iso_pu_bacteria 2896085136 2896085256 377
68 iso_pu_bacteria 2919186247 2919187232 377
69 iso_pu_bacteria 2919437846 2919441638 377
70 iso_pu_bacteria 2928078545 2928080417 377
71 iso_pu_bacteria 2928147474 2928149411 377
72 iso_pu_bacteria 2932082852 2932083241 377
73 iso_pu_bacteria 2939664404 2939665499 377
74 3300001989 JGI24739J22299_10000062 JGI24739J22299_100000627 378
75 3300001989 JGI24739J22299_10016377 JGI24739J22299_100163771 378
76 3300001990 JGI24737J22298_10000564 JGI24737J22298_100005645 378
77 3300002067 JGI24735J21928_10000002 JGI24735J21928_10000002422 378
78 3300002737 JGI25162J39368_1000283 JGI25162J39368_10002835 378
79 3300002772 JGI25164J39214_1001420 JGI25164J39214_10014203 378
80 3300003214 JGI25165J46597_1002335 JGI25165J46597_10023352 378
81 3300003316 rootH1_10015783 rootH1_100157834 378
82 3300003316 rootH1_10046151 rootH1_100461513 378
83 3300003320 rootH2_10121725 rootH2_101217253 378
84 3300003320 rootH2_10135544 rootH2_101355442 378
85 3300003322 rootL2_10132494 rootL2_101324946 378
86 3300003323 rootH1_10006785 rootH1_100067858 378
87 3300005327 Ga0070658_10000019 Ga0070658_1000001995 378
88 3300005327 Ga0070658_10055013 Ga0070658_100550132 378
89 3300005327 Ga0070658_10222911 Ga0070658_102229111 378
90 3300005329 Ga0070683_100075233 Ga0070683_1000752333 378
91 3300005334 Ga0068869_100105822 Ga0068869_1001058222 378
92 3300005339 Ga0070660_100009183 Ga0070660_1000091832 378
93 3300005339 Ga0070660_100040655 Ga0070660_1000406552 378
94 3300005355 Ga0070671_100036644 Ga0070671_1000366444 378
95 3300005366 Ga0070659_100001374 Ga0070659_1000013745 378
96 3300005455 Ga0070663_100007521 Ga0070663_1000075211 378
97 3300005530 Ga0070679_100141586 Ga0070679_1001415862 378
98 3300005539 Ga0068853_100007176 Ga0068853_1000071767 378
99 3300005548 Ga0070665_100000003 Ga0070665_100000003355 378
100 3300005563 Ga0068855_100082427 Ga0068855_1000824274 378
101 3300005563 Ga0068855_100128120 Ga0068855_1001281202 378
102 3300005563 Ga0068855_100146189 Ga0068855_1001461892 378
103 3300005563 Ga0068855_100207364 Ga0068855_1002073642 378
104 3300005614 Ga0068856_100000249 Ga0068856_10000024940 378
105 3300005614 Ga0068856_100007156 Ga0068856_1000071563 378
106 3300005614 Ga0068856_100062982 Ga0068856_1000629823 378
107 3300005616 Ga0068852_100062502 Ga0068852_1000625024 378
108 3300006195 Ga0075366_10002042 Ga0075366_100020427 378
109 3300006195 Ga0075366_10021867 Ga0075366_100218673 378
110 3300006195 Ga0075366_10105717 Ga0075366_101057172 378
111 3300006844 Ga0075428_100215944 Ga0075428_1002159442 378
112 3300009093 Ga0105240_10227211 Ga0105240_102272112 378
113 3300009176 Ga0105242_10158860 Ga0105242_101588602 378
114 3300009545 Ga0105237_10006792 Ga0105237_100067928 378
115 3300010375 Ga0105239_10000440 Ga0105239_1000044014 378
116 3300010375 Ga0105239_10003983 Ga0105239_1000398310 378
117 3300013102 Ga0157371_10004387 Ga0157371_100043877 378
118 3300013102 Ga0157371_10201580 Ga0157371_102015801 378
119 3300013296 Ga0157374_10002569 Ga0157374_100025696 378
120 3300013297 Ga0157378_10005545 Ga0157378_100055455 378
121 3300013306 Ga0163162_10000058 Ga0163162_1000005891 378
122 3300013306 Ga0163162_10003224 Ga0163162_100032243 378
123 3300013307 Ga0157372_10000001 Ga0157372_10000001161 378
124 3300013307 Ga0157372_10000247 Ga0157372_1000024720 378
125 3300013307 Ga0157372_10002637 Ga0157372_1000263715 378
126 3300013307 Ga0157372_10005486 Ga0157372_100054867 378
127 3300013308 Ga0157375_10054491 Ga0157375_100544914 378
128 3300025231 Ga0207427_100171 Ga0207427_10017116 378
129 3300025233 Ga0209437_100024 Ga0209437_100024532 378
130 3300025233 Ga0209437_100052 Ga0209437_10005289 378
131 3300025258 Ga0209129_1006781 Ga0209129_10067813 378
132 3300025261 Ga0209233_1000067 Ga0209233_100006789 378
133 3300025909 Ga0207705_10000069 Ga0207705_1000006997 378
134 3300025909 Ga0207705_10126236 Ga0207705_101262361 378
135 3300025909 Ga0207705_10170796 Ga0207705_101707962 378
136 3300025913 Ga0207695_10036280 Ga0207695_100362802 378
137 3300025913 Ga0207695_10159957 Ga0207695_101599572 378
138 3300025914 Ga0207671_10032965 Ga0207671_100329652 378
139 3300025919 Ga0207657_10162835 Ga0207657_101628352 378
140 3300025921 Ga0207652_10020882 Ga0207652_100208825 378
141 3300025931 Ga0207644_10002257 Ga0207644_100022577 378
142 3300025932 Ga0207690_10002302 Ga0207690_100023023 378
143 3300025942 Ga0207689_10178558 Ga0207689_101785582 378
144 3300025944 Ga0207661_10183759 Ga0207661_101837592 378
145 3300025949 Ga0207667_10062194 Ga0207667_100621944 378
146 3300025949 Ga0207667_10106866 Ga0207667_101068661 378
147 3300026041 Ga0207639_10030054 Ga0207639_100300541 378
148 3300026041 Ga0207639_10082016 Ga0207639_100820162 378
149 3300026078 Ga0207702_10003179 Ga0207702_1000317914 378
150 3300026078 Ga0207702_10033619 Ga0207702_100336194 378
151 3300026078 Ga0207702_10090542 Ga0207702_100905423 378
152 3300026116 Ga0207674_10135471 Ga0207674_101354712 378
153 3300026142 Ga0207698_10047364 Ga0207698_100473644 378
154 3300028379 Ga0268266_10000078 Ga0268266_10000078145 378
155 3300028794 Ga0307515_10000778 Ga0307515_1000077818 378
156 3300030731 Ga0316177_1191725 Ga0316177_11917258 378
157 3300030732 Ga0316176_1203768 Ga0316176_12037684 378
158 3300031507 Ga0307509_10037891 Ga0307509_100378912 378
159 3300031995 Ga0307409_100075140 Ga0307409_1000751403 378
160 3300032004 Ga0307414_10015441 Ga0307414_100154414 378
161 3300033179 Ga0307507_10000010 Ga0307507_1000001036 378
162 3300037418 Ga0395900_0101915 Ga0395900_0101915_1136_2281 378
163 3300037471 Ga0395905_0000001 Ga0395905_0000001_1800660_1801817 378
164 3300042876 Ga0451577_0005243 Ga0451577_0005243_5438_6592 378
165 3300042876 Ga0451577_0044832 Ga0451577_0044832_907_2067 378
166 3300044673 Ga0453683_0068699 Ga0453683_0068699_989_2131 378
167 3300044684 Ga0466966_0034143 Ga0466966_0034143_1854_2999 378
168 3300044712 Ga0453684_0000401 Ga0453684_0000401_40599_41759 378
169 3300044712 Ga0453684_0002831 Ga0453684_0002831_31848_33002 378
170 3300044712 Ga0453684_0017877 Ga0453684_0017877_5629_6783 378
171 3300044712 Ga0453684_0239745 Ga0453684_0239745_904_2061 378
172 3300045051 Ga0451576_0006049 Ga0451576_0006049_4298_5452 378
173 3300045051 Ga0451576_0009203 Ga0451576_0009203_1763_2923 378
174 3300045051 Ga0451576_0013394 Ga0451576_0013394_6273_7415 378
175 3300046454 Ga0495592_0032623 Ga0495592_0032623_310_1464 378
176 3300046460 Ga0495638_0079308 Ga0495638_0079308_20_1165 378
177 3300046471 Ga0495650_0000014 Ga0495650_0000014_90715_91860 378
178 3300046471 Ga0495650_0037689 Ga0495650_0037689_262_1407 378
179 3300046492 Ga0495585_0000158 Ga0495585_0000158_51972_53117 378
180 3300046492 Ga0495585_0000902 Ga0495585_0000902_10443_11588 378
181 3300046506 Ga0495583_0008254 Ga0495583_0008254_856_2001 378
182 3300046507 Ga0495606_0000096 Ga0495606_0000096_139336_140481 378
183 3300046512 Ga0495610_0009957 Ga0495610_0009957_2625_3770 378
184 3300046513 Ga0495616_0012273 Ga0495616_0012273_3235_4380 378
185 3300046513 Ga0495616_0022190 Ga0495616_0022190_218_1363 378
186 3300046523 Ga0495644_0002785 Ga0495644_0002785_4759_5904 378
187 3300046524 Ga0495648_0022480 Ga0495648_0022480_300_1445 378
188 3300046538 Ga0495609_0059525 Ga0495609_0059525_479_1624 378
189 3300046558 Ga0495633_0000193 Ga0495633_0000193_1361_2506 378
190 3300046558 Ga0495633_0008350 Ga0495633_0008350_3573_4718 378
191 3300046616 Ga0495668_0000003 Ga0495668_0000003_652025_653170 378
192 3300046642 Ga0495634_0126591 Ga0495634_0126591_123_1277 378
193 3300046660 Ga0495625_0000003 Ga0495625_0000003_144031_145176 378
194 3300046660 Ga0495625_0000846 Ga0495625_0000846_4618_5763 378
195 3300046660 Ga0495625_0001822 Ga0495625_0001822_7014_8159 378
196 3300046660 Ga0495625_0014208 Ga0495625_0014208_1923_3068 378
197 3300046660 Ga0495625_0019366 Ga0495625_0019366_3096_4241 378
198 3300046665 Ga0495661_0004777 Ga0495661_0004777_3111_4256 378
199 3300046694 Ga0495649_0000002 Ga0495649_0000002_861811_862956 378
200 3300046810 Ga0495660_0006252 Ga0495660_0006252_2785_3930 378
201 3300047443 Ga0495687_001250 Ga0495687_001250_436_1581 378
202 3300047472 Ga0495686_0000367 Ga0495686_0000367_13351_14496 378
203 3300047472 Ga0495686_0055723 Ga0495686_0055723_110_1255 378
204 3300047472 Ga0495686_0097917 Ga0495686_0097917_607_1752 378
205 3300049459 Ga0495678_005847 Ga0495678_005847_4656_5801 378
206 3300049823 Ga0501044_0061581 Ga0501044_0061581_1368_2531 378
207 3300050493 nmdc:mga0k408_41_c1 nmdc:mga0k408_41_c1_54110_55255 378
208 3300050493 nmdc:mga0k408_853_c1 nmdc:mga0k408_853_c1_1057_2202 378
209 3300050511 nmdc:mga08y16_135068_c1 nmdc:mga08y16_135068_c1_1334_2476 378
210 3300053125 Ga0500618_000004 Ga0500618_000004_2329_3474 378
211 3300053157 Ga0500624_001145 Ga0500624_001145_724_1869 378
212 3300059424 Ga0590075_008185 Ga0590075_008185_451_1596 378
213 iso_pu_bacteria 2891633521 2891637453 378

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

53

405

0.93

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

106

255

0.87

PF01053

Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

65

233

0.87

PF00266

Aminotran_5

Aminotransferase class-V

74

231

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
1u08-assembly1.cif.gz_A crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.9833 1 377
1u08-assembly1.cif.gz_A crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.9807 1 377
1u08-assembly1.cif.gz_B crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.9764 1 377
1u08-assembly1.cif.gz_B crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.9687 1 377
2o0r-assembly1.cif.gz_B the three-dimensional structure of n-succinyldiaminopimelate aminotransferase from mycobacterium tuberculosis 0.9571 1 376
ID Description Score Start End Superfamily
af_P77806_47_284_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9884 41 275 3.40.640.10
af_A0A1D6I5Q5_168_402_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9849 39 271 3.40.640.10
af_P77806_286_386_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9787 278 377 3.90.1150.10
af_P77806_47_284_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.972 41 275 3.40.640.10
af_Q7XDA3_47_275_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9717 44 273 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A5C6M309-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9982 1 377 GO:0005737
GO:0009058
GO:0016212
GO:0030170
AF-A0A5C6M309-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9955 1 377 GO:0005737
GO:0009058
GO:0016212
GO:0030170
AF-A0A1E5T4N5-F1-model_v4 Aminotransferase 0.9929 1 377 GO:0005737
GO:0009058
GO:0016212
GO:0030170
AF-A0A5E4VSW7-F1-model_v4 Aminotransferase 0.9916 1 377 GO:0005737
GO:0009058
GO:0016212
GO:0030170
AF-A0A523Q4S0-F1-model_v4 Methionine aminotransferase 0.9908 1 377 GO:0005737
GO:0009058
GO:0016212
GO:0030170

Feature Viewer

pLDDT pTM Quality
96.27 0.93 High
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Predicted Structure (AlphaFold2)

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