F324396

General Info

Members Datasets Scaffolds Average Seq Length
213 167 426 330

Family's Representative Sequence

Representative Sequence 3300046507|Ga0495606_0000767|Ga0495606_0000767_9465_10538
Length 357
Sequence VVAHPPVICGKMRTFQNDGSDKSAEAPMYIVVTGAAGLIGSNIVKALNERGITNIIAVDNLTRGDKFKNLVDCEIHDYVDKHEFLARIRTHAYDRRIKAIFHEGACSDTMEHNGKYMMENNYQYSLELLEFCKEQHAQFLYASSAAVYGGGTIFKEEREYEDPLNVYGYSKFLFDQVVRQKKGEMTAQVVGFRYFNVYGPREGHKGRMASVAFHHFNQYRESGKVKLFEGRDGYENGGQLRDFVSVKDVAKVNLWFFDHPEVSGIFNLGTGRAQPFNDVATAVVNAMREMEGKGAMTTAEMVEAGIIEYVPFPEALIGKYQSFTQADMTKMRAAGYSESFQSVEDGVRDYLVSWLFK

Samples

Sample ID Description Type Environment
1 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
7 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
8 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
9 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
10 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
54 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
55 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
61 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
62 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
64 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
90 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
91 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
92 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
93 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
94 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
95 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
96 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
97 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
98 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
100 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
101 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
102 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
103 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
104 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
105 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
106 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
107 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
108 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
109 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
114 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
115 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
116 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
117 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
118 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
119 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
120 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
121 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
122 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
123 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
124 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
125 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
126 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
129 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
130 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
131 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
132 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
135 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
136 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
137 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
138 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
139 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
140 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
141 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
151 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
152 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
153 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
154 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
155 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
156 3300049680 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_B_3_drought Metagenome Rhizosphere
157 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
158 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
161 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
162 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
163 3300059630 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 165R_SD_T3_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
164 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
165 2836160341 Unclassified Planctomycetes Bin 134 Isolate Unclassified
166 2998344455 Vogesella urethralis SLBN-145 Isolate Rhizosphere
167 8057160832 Larsenimonas rhizosphaerae GH2-1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.31
Metatranscriptomes 2.82
Isolates 1.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.68
Nodule 0
Rhizoplane 0.47
Rhizosphere 84.98
Stem 0
Stem Tuber 0
Unclassified 0.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495606_0000767 3300046507 Bacteria 49266
2 JGI25162J39368_1000032 3300002737 Bacteria 195871
3 JGI25164J39214_1002262 3300002772 Unclassified 3132
4 JGI25165J46597_1000067 3300003214 Bacteria 196411
5 rootL2_10002157 3300003322 Bacteria 12658
6 Ga0055538_1000033 3300003751 Bacteria 195914
7 Ga0055539_1000045 3300003752 Bacteria 195316
8 Ga0055533_1000054 3300003756 Bacteria 195914
9 Ga0055525_1000065 3300003759 Bacteria 195779
10 Ga0055541_1000031 3300003841 Bacteria 195914
11 Ga0070658_10077683 3300005327 Bacteria 2724
12 Ga0070683_100061950 3300005329 Bacteria 3478
13 Ga0070670_100075360 3300005331 Bacteria 2899
14 Ga0070661_100003099 3300005344 Bacteria 11440
15 Ga0070674_100071635 3300005356 Bacteria 2452
16 Ga0070678_100182866 3300005456 Bacteria 1717
17 Ga0070681_10005398 3300005458 Bacteria 12344
18 Ga0068867_100090602 3300005459 Bacteria 2320
19 Ga0070706_100004726 3300005467 Bacteria 13056
20 Ga0070707_100209558 3300005468 Bacteria 1900
21 Ga0070679_100035077 3300005530 Bacteria 4976
22 Ga0070684_100192428 3300005535 Bacteria 1857
23 Ga0070672_100081945 3300005543 Bacteria 2588
24 Ga0070665_100219964 3300005548 Bacteria 1899
25 Ga0070704_100324489 3300005549 Bacteria 1291
26 Ga0068855_100086433 3300005563 Bacteria 3626
27 Ga0068855_100594341 3300005563 Bacteria 1194
28 Ga0070664_100004826 3300005564 Bacteria 10800
29 Ga0070664_100092111 3300005564 Bacteria 2624
30 Ga0068854_100000125 3300005578 Bacteria 52611
31 Ga0068854_100014661 3300005578 Bacteria 5170
32 Ga0068856_100005833 3300005614 Bacteria 12138
33 Ga0068852_100007364 3300005616 Bacteria 8028
34 Ga0068852_100011882 3300005616 Bacteria 6583
35 Ga0068852_100244030 3300005616 Bacteria 1718
36 Ga0068851_10011941 3300005834 Bacteria 4084
37 Ga0068862_100316250 3300005844 Bacteria 1440
38 Ga0075368_10016319 3300006042 Bacteria 2767
39 Ga0075364_10000410 3300006051 Bacteria 21408
40 Ga0070716_100140975 3300006173 Bacteria 1537
41 Ga0075367_10006368 3300006178 Bacteria 5957
42 Ga0075366_10002502 3300006195 Bacteria 9436
43 Ga0075366_10013259 3300006195 Bacteria 4688
44 Ga0097621_100258562 3300006237 Bacteria 1527
45 Ga0075370_10034302 3300006353 Bacteria 2845
46 Ga0068871_100019560 3300006358 Bacteria 5172
47 Ga0075428_100018112 3300006844 Bacteria 7782
48 Ga0075429_100005882 3300006880 Bacteria 10587
49 Ga0105240_10002234 3300009093 Bacteria 31502
50 Ga0105245_10610396 3300009098 Bacteria 1118
51 Ga0105239_10203926 3300010375 Bacteria 2216
52 Ga0157370_10158126 3300013104 Bacteria 2108
53 Ga0157369_10000896 3300013105 Bacteria 38031
54 Ga0157374_10031736 3300013296 Bacteria 4805
55 Ga0157372_10020389 3300013307 Bacteria 7151
56 Ga0157372_10055413 3300013307 Bacteria 4428
57 Ga0206349_1622967 3300020075 Bacteria 3490
58 Ga0206351_10189037 3300020077 Bacteria 31186
59 Ga0206350_10835322 3300020080 Bacteria 3507
60 Ga0154015_1384786 3300020610 Bacteria 30627
61 Ga0213872_10000346 3300021361 Bacteria 39111
62 Ga0213872_10044215 3300021361 Bacteria 2027
63 Ga0213872_10063394 3300021361 Bacteria 1670
64 Ga0224712_10014289 3300022467 Bacteria 2552
65 Ga0209784_100048 3300025224 Bacteria 198885
66 Ga0209566_100060 3300025225 Bacteria 198885
67 Ga0209674_100082 3300025226 Bacteria 198885
68 Ga0209563_100082 3300025230 Bacteria 198750
69 Ga0209563_101397 3300025230 Bacteria 6457
70 Ga0207427_100653 3300025231 Bacteria 16818
71 Ga0209437_100125 3300025233 Bacteria 198146
72 Ga0209677_100046 3300025253 Bacteria 198287
73 Ga0209233_1000138 3300025261 Bacteria 198287
74 Ga0207656_10003930 3300025321 Bacteria 5144
75 Ga0207705_10042610 3300025909 Bacteria 3259
76 Ga0207684_10006791 3300025910 Bacteria 10377
77 Ga0207707_10043787 3300025912 Bacteria 3903
78 Ga0207695_10000301 3300025913 Bacteria 121221
79 Ga0207660_10014939 3300025917 Bacteria 5118
80 Ga0207649_10016691 3300025920 Bacteria 4148
81 Ga0207652_10028639 3300025921 Bacteria 4650
82 Ga0207646_10146427 3300025922 Bacteria 2128
83 Ga0207650_10056495 3300025925 Bacteria 2916
84 Ga0207706_10146610 3300025933 Bacteria 2076
85 Ga0207669_10186916 3300025937 Bacteria 1491
86 Ga0207665_10084148 3300025939 Bacteria 2195
87 Ga0207691_10109414 3300025940 Bacteria 2458
88 Ga0207679_10037955 3300025945 Bacteria 3429
89 Ga0207667_10119929 3300025949 Bacteria 2710
90 Ga0207667_10535656 3300025949 Bacteria 1185
91 Ga0207640_10000062 3300025981 Bacteria 88964
92 Ga0207678_10193134 3300026067 Bacteria 1740
93 Ga0207708_10089087 3300026075 Bacteria 2378
94 Ga0207708_10198638 3300026075 Bacteria 1599
95 Ga0207702_10011891 3300026078 Bacteria 7246
96 Ga0207648_10123025 3300026089 Bacteria 2281
97 Ga0207675_100147979 3300026118 Bacteria 2234
98 Ga0207683_10094172 3300026121 Bacteria 2669
99 Ga0207698_10010795 3300026142 Bacteria 5891
100 Ga0207698_10028334 3300026142 Bacteria 3992
101 Ga0268266_10117178 3300028379 Bacteria 2366
102 Ga0268266_10275078 3300028379 Bacteria 1564
103 Ga0265324_10000118 3300029957 Bacteria 62790
104 Ga0265324_10045178 3300029957 Bacteria 1517
105 Ga0265325_10011547 3300031241 Bacteria 5073
106 Ga0265316_10016746 3300031344 Bacteria 6350
107 Ga0265316_10021836 3300031344 Bacteria 5411
108 Ga0265314_10000401 3300031711 Bacteria 58807
109 Ga0265314_10066733 3300031711 Bacteria 2426
110 Ga0316578_10027152 3300031728 Bacteria 3234
111 Ga0373928_0012635 3300035084 Bacteria 1687
112 Ga0373947_0217278 3300035725 Bacteria 1256
113 Ga0316582_0001285 3300036647 Bacteria 10853
114 Ga0316584_0014912 3300036712 Bacteria 5550
115 Ga0373925_0118880 3300037068 Bacteria 2050
116 Ga0395899_0105545 3300037312 Bacteria 2029
117 Ga0395900_0092128 3300037418 Bacteria 3114
118 Ga0395898_0036592 3300037466 Bacteria 4874
119 Ga0436360_0024159 3300039438 Bacteria 1099
120 Ga0436361_0055087 3300039447 Bacteria 3064
121 Ga0436361_0576920 3300039447 Bacteria 94641
122 Ga0436361_0638104 3300039447 Bacteria 1900
123 Ga0436361_0649459 3300039447 Bacteria 54210
124 Ga0436361_0777511 3300039447 Bacteria 5381
125 Ga0436361_1186452 3300039447 Bacteria 3475
126 Ga0451577_0004210 3300042876 Bacteria 15345
127 Ga0451577_0049104 3300042876 Bacteria 3768
128 Ga0466969_0004181 3300044656 Bacteria 7661
129 Ga0466977_0009945 3300044666 Bacteria 5386
130 Ga0466965_0017497 3300044683 Bacteria 3427
131 Ga0466966_0020926 3300044684 Bacteria 4300
132 Ga0466961_0000408 3300044693 Bacteria 27615
133 Ga0453684_0000005 3300044712 Bacteria 1431632
134 Ga0453684_0000471 3300044712 Bacteria 159987
135 Ga0453684_0001481 3300044712 Bacteria 66267
136 Ga0453684_0002079 3300044712 Bacteria 50825
137 Ga0453684_0003697 3300044712 Bacteria 33898
138 Ga0453684_0006506 3300044712 Bacteria 22148
139 Ga0453684_0007776 3300044712 Bacteria 19557
140 Ga0453684_0022073 3300044712 Bacteria 9467
141 Ga0453684_0106717 3300044712 Bacteria 3412
142 Ga0453684_0318222 3300044712 Bacteria 1763
143 Ga0466959_0001444 3300045049 Bacteria 14556
144 Ga0451576_0002462 3300045051 Bacteria 27558
145 Ga0451576_0026399 3300045051 Bacteria 6248
146 Ga0451576_0065203 3300045051 Bacteria 3792
147 Ga0451576_0095644 3300045051 Bacteria 3090
148 Ga0451576_0129924 3300045051 Bacteria 2625
149 Ga0451576_0265494 3300045051 Bacteria 1794
150 Ga0495603_0046330 3300046455 Bacteria 2591
151 Ga0495629_0005869 3300046459 Bacteria 9154
152 Ga0495580_0098444 3300046472 Bacteria 2034
153 Ga0495584_0011723 3300046491 Bacteria 4483
154 Ga0495585_0056228 3300046492 Bacteria 2174
155 Ga0495594_0016943 3300046499 Bacteria 3844
156 Ga0495594_0216137 3300046499 Bacteria 1093
157 Ga0495616_0095409 3300046513 Bacteria 1402
158 Ga0495630_0038584 3300046517 Bacteria 3573
159 Ga0495631_0023984 3300046518 Bacteria 2822
160 Ga0495586_0033837 3300046535 Bacteria 2743
161 Ga0495587_0036161 3300046536 Bacteria 2971
162 Ga0495598_0027552 3300046537 Bacteria 1569
163 Ga0495609_0115693 3300046538 Bacteria 1155
164 Ga0495597_0000606 3300046542 Bacteria 29399
165 Ga0495597_0020831 3300046542 Bacteria 3050
166 Ga0495668_0069287 3300046616 Bacteria 1940
167 Ga0495611_0013712 3300046648 Bacteria 3454
168 Ga0495625_0014039 3300046660 Bacteria 6412
169 Ga0495613_0131755 3300046689 Bacteria 1790
170 Ga0495670_0108125 3300046691 Bacteria 1437
171 Ga0495581_0021527 3300047315 Bacteria 3736
172 Ga0495604_0275544 3300047317 Bacteria 1138
173 Ga0495674_0007652 3300047319 Bacteria 10317
174 Ga0495676_0017739 3300047321 Bacteria 6287
175 Ga0495675_0011961 3300047444 Bacteria 5454
176 Ga0495593_0001476 3300047673 Bacteria 13811
177 Ga0495593_0012099 3300047673 Bacteria 4940
178 Ga0495602_0066394 3300048088 Bacteria 3108
179 Ga0495626_0046502 3300048091 Bacteria 2021
180 Ga0496115_0001946 3300048918 Bacteria 14732
181 Ga0496126_0082944 3300048929 Bacteria 2830
182 Ga0501032_0015778 3300049569 Bacteria 5327
183 Ga0501034_0000519 3300049571 Bacteria 61966
184 Ga0501034_0084401 3300049571 Bacteria 3178
185 Ga0501037_0016239 3300049573 Bacteria 5479
186 Ga0501037_0049743 3300049573 Bacteria 3069
187 Ga0501038_0002678 3300049574 Bacteria 16633
188 Ga0501039_0075888 3300049575 Bacteria 2613
189 Ga0501043_0032592 3300049579 Bacteria 4097
190 Ga0501046_0004626 3300049580 Bacteria 12432
191 Ga0501047_0075904 3300049581 Bacteria 3235
192 Ga0501069_0096829 3300049585 Bacteria 1672
193 Ga0501070_0006951 3300049586 Bacteria 9627
194 Ga0501070_0033421 3300049586 Bacteria 4304
195 Ga0501070_0047129 3300049586 Bacteria 3583
196 Ga0501070_0102005 3300049586 Bacteria 2373
197 Ga0501072_0018947 3300049588 Bacteria 5312
198 Ga0501073_0123057 3300049589 Bacteria 1798
199 Ga0501074_0007235 3300049590 Bacteria 8018
200 Ga0501209_019924 3300049656 Bacteria 1573
201 Ga0501250_008323 3300049680 Bacteria 1142
202 Ga0501079_0073426 3300049741 Bacteria 2644
203 Ga0501080_0006331 3300049742 Bacteria 10625
204 Ga0501035_0234851 3300049822 Bacteria 1562
205 nmdc:mga00v17_533_c1 3300050491 Bacteria 21376
206 nmdc:mga0k408_2174_c1 3300050493 Bacteria 10521
207 nmdc:mga0k408_32491_c1 3300050493 Bacteria 2982
208 nmdc:mga0sz30_48492_c1 3300050516 Bacteria 1797
209 Ga0587128_004600 3300059630 Bacteria 1611
210 2547375903 2547132103 Bacteria 5115736
211 2836165293 2836160341 Unclassified 5867367
212 2998347943 2998344455 Bacteria 4222996
213 8057162244 8057160832 Bacteria 3268302
214 Ga0495606_0000767
215 JGI25162J39368_1000032
216 JGI25164J39214_1002262
217 JGI25165J46597_1000067
218 rootL2_10002157
219 Ga0055538_1000033
220 Ga0055539_1000045
221 Ga0055533_1000054
222 Ga0055525_1000065
223 Ga0055541_1000031
224 Ga0070658_10077683
225 Ga0070683_100061950
226 Ga0070670_100075360
227 Ga0070661_100003099
228 Ga0070674_100071635
229 Ga0070678_100182866
230 Ga0070681_10005398
231 Ga0068867_100090602
232 Ga0070706_100004726
233 Ga0070707_100209558
234 Ga0070679_100035077
235 Ga0070684_100192428
236 Ga0070672_100081945
237 Ga0070665_100219964
238 Ga0070704_100324489
239 Ga0068855_100086433
240 Ga0068855_100594341
241 Ga0070664_100004826
242 Ga0070664_100092111
243 Ga0068854_100000125
244 Ga0068854_100014661
245 Ga0068856_100005833
246 Ga0068852_100007364
247 Ga0068852_100011882
248 Ga0068852_100244030
249 Ga0068851_10011941
250 Ga0068862_100316250
251 Ga0075368_10016319
252 Ga0075364_10000410
253 Ga0070716_100140975
254 Ga0075367_10006368
255 Ga0075366_10002502
256 Ga0075366_10013259
257 Ga0097621_100258562
258 Ga0075370_10034302
259 Ga0068871_100019560
260 Ga0075428_100018112
261 Ga0075429_100005882
262 Ga0105240_10002234
263 Ga0105245_10610396
264 Ga0105239_10203926
265 Ga0157370_10158126
266 Ga0157369_10000896
267 Ga0157374_10031736
268 Ga0157372_10020389
269 Ga0157372_10055413
270 Ga0206349_1622967
271 Ga0206351_10189037
272 Ga0206350_10835322
273 Ga0154015_1384786
274 Ga0213872_10000346
275 Ga0213872_10044215
276 Ga0213872_10063394
277 Ga0224712_10014289
278 Ga0209784_100048
279 Ga0209566_100060
280 Ga0209674_100082
281 Ga0209563_100082
282 Ga0209563_101397
283 Ga0207427_100653
284 Ga0209437_100125
285 Ga0209677_100046
286 Ga0209233_1000138
287 Ga0207656_10003930
288 Ga0207705_10042610
289 Ga0207684_10006791
290 Ga0207707_10043787
291 Ga0207695_10000301
292 Ga0207660_10014939
293 Ga0207649_10016691
294 Ga0207652_10028639
295 Ga0207646_10146427
296 Ga0207650_10056495
297 Ga0207706_10146610
298 Ga0207669_10186916
299 Ga0207665_10084148
300 Ga0207691_10109414
301 Ga0207679_10037955
302 Ga0207667_10119929
303 Ga0207667_10535656
304 Ga0207640_10000062
305 Ga0207678_10193134
306 Ga0207708_10089087
307 Ga0207708_10198638
308 Ga0207702_10011891
309 Ga0207648_10123025
310 Ga0207675_100147979
311 Ga0207683_10094172
312 Ga0207698_10010795
313 Ga0207698_10028334
314 Ga0268266_10117178
315 Ga0268266_10275078
316 Ga0265324_10000118
317 Ga0265324_10045178
318 Ga0265325_10011547
319 Ga0265316_10016746
320 Ga0265316_10021836
321 Ga0265314_10000401
322 Ga0265314_10066733
323 Ga0316578_10027152
324 Ga0373928_0012635
325 Ga0373947_0217278
326 Ga0316582_0001285
327 Ga0316584_0014912
328 Ga0373925_0118880
329 Ga0395899_0105545
330 Ga0395900_0092128
331 Ga0395898_0036592
332 Ga0436360_0024159
333 Ga0436361_0055087
334 Ga0436361_0576920
335 Ga0436361_0638104
336 Ga0436361_0649459
337 Ga0436361_0777511
338 Ga0436361_1186452
339 Ga0451577_0004210
340 Ga0451577_0049104
341 Ga0466969_0004181
342 Ga0466977_0009945
343 Ga0466965_0017497
344 Ga0466966_0020926
345 Ga0466961_0000408
346 Ga0453684_0000005
347 Ga0453684_0000471
348 Ga0453684_0001481
349 Ga0453684_0002079
350 Ga0453684_0003697
351 Ga0453684_0006506
352 Ga0453684_0007776
353 Ga0453684_0022073
354 Ga0453684_0106717
355 Ga0453684_0318222
356 Ga0466959_0001444
357 Ga0451576_0002462
358 Ga0451576_0026399
359 Ga0451576_0065203
360 Ga0451576_0095644
361 Ga0451576_0129924
362 Ga0451576_0265494
363 Ga0495603_0046330
364 Ga0495629_0005869
365 Ga0495580_0098444
366 Ga0495584_0011723
367 Ga0495585_0056228
368 Ga0495594_0016943
369 Ga0495594_0216137
370 Ga0495616_0095409
371 Ga0495630_0038584
372 Ga0495631_0023984
373 Ga0495586_0033837
374 Ga0495587_0036161
375 Ga0495598_0027552
376 Ga0495609_0115693
377 Ga0495597_0000606
378 Ga0495597_0020831
379 Ga0495668_0069287
380 Ga0495611_0013712
381 Ga0495625_0014039
382 Ga0495613_0131755
383 Ga0495670_0108125
384 Ga0495581_0021527
385 Ga0495604_0275544
386 Ga0495674_0007652
387 Ga0495676_0017739
388 Ga0495675_0011961
389 Ga0495593_0001476
390 Ga0495593_0012099
391 Ga0495602_0066394
392 Ga0495626_0046502
393 Ga0496115_0001946
394 Ga0496126_0082944
395 Ga0501032_0015778
396 Ga0501034_0000519
397 Ga0501034_0084401
398 Ga0501037_0016239
399 Ga0501037_0049743
400 Ga0501038_0002678
401 Ga0501039_0075888
402 Ga0501043_0032592
403 Ga0501046_0004626
404 Ga0501047_0075904
405 Ga0501069_0096829
406 Ga0501070_0006951
407 Ga0501070_0033421
408 Ga0501070_0047129
409 Ga0501070_0102005
410 Ga0501072_0018947
411 Ga0501073_0123057
412 Ga0501074_0007235
413 Ga0501209_019924
414 Ga0501250_008323
415 Ga0501079_0073426
416 Ga0501080_0006331
417 Ga0501035_0234851
418 nmdc:mga00v17_533_c1
419 nmdc:mga0k408_2174_c1
420 nmdc:mga0k408_32491_c1
421 nmdc:mga0sz30_48492_c1
422 Ga0587128_004600
423 2547375903
424 2836165293
425 2998347943
426 8057162244

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

30

269

0.83

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

31

231

0.81

PF04321

RmlD_sub_bind

RmlD substrate binding domain

28

228

0.79

PF07993

NAD_binding_4

Male sterility protein

85

252

0.79

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

31

349

0.68

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

30

334

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ej0-assembly1.cif.gz_A crystal structure of adp-l-glycero-d-manno-heptose-6-epimerase from burkholderia thailandensis 0.9803 1 331
4ej0-assembly1.cif.gz_A crystal structure of adp-l-glycero-d-manno-heptose-6-epimerase from burkholderia thailandensis 0.9745 1 331
1eq2-assembly1.cif.gz_A the crystal structure of adp-l-glycero-d-mannoheptose 6-epimerase 0.9709 3 325
1eq2-assembly2.cif.gz_H the crystal structure of adp-l-glycero-d-mannoheptose 6-epimerase 0.9599 3 325
1eq2-assembly1.cif.gz_C the crystal structure of adp-l-glycero-d-mannoheptose 6-epimerase 0.9562 3 325
ID Description Score Start End Superfamily
4ej0F02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9916 168 324 3.90.25.10
4ej0F02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9754 168 324 3.90.25.10
2x6tA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9652 3 241 3.40.50.720
2x6tA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8907 3 241 3.40.50.720
af_Q9Y7N4_8_341_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8795 1 33 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1G3JBK0-F1-model_v4 ADP-glyceromanno-heptose 6-epimerase 0.9945 101 330 GO:0005975
GO:0008712
GO:0050661
AF-A0A354K1R9-F1-model_v4 deleted 0.9935 124 331
AF-A0A645EYN4-F1-model_v4 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) 0.9929 215 331 GO:0008712
AF-A0A4W5LIB8-F1-model_v4 NAD-dependent epimerase/dehydratase domain-containing protein 0.9917 1 271 GO:0005975
GO:0008712
GO:0050661
AF-A0A0U5F4L3-F1-model_v4 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME) 0.9904 1 330 GO:0005975
GO:0008712
GO:0050661
GO:0097171

Map