F324650

General Info

Members Datasets Scaffolds Average Seq Length
213 171 426 532

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2966924647|2966925214
Length 591
Sequence TAAKADAPFLLTKRRIWIIFGALISGMLLSSLDQTIVSTAMPTIVGELGGVEHQAWITTAYLLATTIVMPIYGKFGDVLGRRNLFLVAIAIFTLASIGCAFATDFWMFVVFRAIQGLGGGGLMILSQAIIADIVPASERGKYLGPLGAVFGLSAIGGPLLGGFFVDHLTWQWAFYINIPVGIAAFAITWAALTLPSKKATKRIDVLGVVLLSAATTCLIFFTEFGGQDDHGWGAPETWLWGAGVVVAASLFVLVESRADDPIIPLSFFRNKVFVLATAVGFVLGIGMFSAIAFVPTFLQMSSGASAAVSGLLLLPMMVGLIGTSILSGNLITRTGKYKVFPVVGTILTGIAMALFTTLTADTPLWLICVFFFLFGAGLGLIMQVVVLVVQNSVDAQNVGTATSTNNYFREVGAALGVAIFGALFTSRLTSNLTDVFTGAGASAGDASQATATLDPATLNQLPEQIRRLVVEAYADSLAPVFAYLIPFIAVAFVLSLFLPQIRLSDVAGMVSRGEALSGDEAEQLEAAERAAHGRGAGRAGRRGAGTASEVATAGAVATGAPVAPLDGADERDDADERVADGADERDDADRP

Samples

Sample ID Description Type Environment
1 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
2 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300003285 Grassland soil microbial communities from Hopland, California, USA - Sample H3_Rhizo_39 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
7 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
14 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
15 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
16 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
17 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
18 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
19 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
20 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
21 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
22 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
23 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
24 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
25 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
26 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
27 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
28 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
29 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
38 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
39 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
40 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
41 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
42 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
43 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
44 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
45 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
46 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
47 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
48 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
49 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
50 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
51 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
52 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
53 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
54 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
55 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
56 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
57 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
58 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
59 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
60 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
61 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
62 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
63 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
64 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
65 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
66 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
67 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
68 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
69 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
70 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
71 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
72 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
73 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
74 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
75 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
76 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
77 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
78 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
79 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
80 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
81 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
82 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
86 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
87 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
88 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
89 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
90 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
91 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
92 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
93 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
94 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
95 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
96 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
97 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
98 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
99 2547132424 Nocardia nova SH22a Isolate Unclassified
100 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
101 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
102 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
103 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
104 2643221553 Microbacterium sp. Root553 Isolate Unclassified
105 2643221566 Microbacterium sp. Root166 Isolate Unclassified
106 2643221572 Leifsonia sp. Root60 Isolate Unclassified
107 2643221630 Microbacterium sp. Root322 Isolate Unclassified
108 2643221649 Leifsonia sp. Root4 Isolate Unclassified
109 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
110 2643221692 Nocardia sp. Root136 Isolate Unclassified
111 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
112 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
113 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
114 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
115 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
116 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
117 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
118 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
119 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
120 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
121 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
122 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
123 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
124 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
125 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
126 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
127 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
128 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
129 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
130 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
131 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
132 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
133 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
134 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
135 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
136 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
137 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
138 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
139 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
140 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
141 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
142 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
143 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
144 2919395869 Microbacterium resistens 2980 Isolate Unclassified
145 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
146 2920879853 Kocuria salina CV6 Isolate Unclassified
147 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
148 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
149 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
150 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
151 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
152 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
153 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
154 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
155 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
156 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
157 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
158 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
159 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
160 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
161 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
162 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
163 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
164 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
165 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
166 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
167 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
168 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
169 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
170 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
171 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 63.38
Metatranscriptomes 1.88
Isolates 34.74

Biome Distribution

Category Percentage (%)
Aerial Root 0.47
Bulb 0
Endosphere 11.27
Nodule 0
Rhizoplane 2.35
Rhizosphere 61.5
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1002772 3300000549 Bacteria 2406
2 JGI25154J39366_1001573 3300002738 Bacteria 7835
3 JGI25152J39213_1000411 3300002773 Bacteria 25803
4 Ga0007423J48922_100772 3300003285 Bacteria 9043
5 rootH1_10012224 3300003323 Bacteria 33390
6 Ga0006562J51391_1052846 3300003578 Bacteria 15670
7 Ga0006562J51391_1052850 3300003578 Bacteria 11320
8 Ga0065714_10069295 3300005288 Bacteria 4291
9 Ga0070674_100028211 3300005356 Bacteria 3686
10 Ga0070667_100040948 3300005367 Bacteria 3886
11 Ga0068866_10024068 3300005718 Bacteria 2841
12 Ga0070717_10059696 3300006028 Bacteria 3156
13 Ga0075365_10006034 3300006038 Bacteria 6615
14 Ga0075364_10007086 3300006051 Bacteria 6628
15 Ga0075364_10035308 3300006051 Bacteria 3230
16 Ga0075369_10001024 3300006186 Bacteria 9335
17 Ga0075369_10003754 3300006186 Bacteria 5555
18 Ga0068865_100044111 3300006881 Bacteria 3050
19 Ga0105244_10017979 3300009036 Bacteria 3979
20 Ga0105244_10020956 3300009036 Bacteria 3622
21 Ga0105243_10026045 3300009148 Bacteria 4475
22 Ga0105243_10038678 3300009148 Bacteria 3716
23 Ga0105248_10000619 3300009177 Bacteria 40470
24 Ga0105246_10071374 3300011119 Bacteria 2445
25 Ga0157371_10029176 3300013102 Bacteria 3993
26 Ga0157370_10006052 3300013104 Bacteria 13433
27 Ga0157370_10124909 3300013104 Bacteria 2402
28 Ga0157369_10001451 3300013105 Bacteria 29091
29 Ga0171462_1005 3300013250 Bacteria 598379
30 Ga0157378_10024741 3300013297 Bacteria 5286
31 Ga0157372_10143126 3300013307 Bacteria 2757
32 Ga0209646_1000088 3300025246 Bacteria 192345
33 Ga0209129_1000059 3300025258 Bacteria 250603
34 Ga0209025_1000782 3300025294 Bacteria 52292
35 Ga0209051_1002951 3300025303 Bacteria 11598
36 Ga0207697_10008002 3300025315 Bacteria 4667
37 Ga0207655_1010288 3300025728 Bacteria 5682
38 Ga0207655_1012726 3300025728 Bacteria 4888
39 Ga0207709_10009410 3300025935 Bacteria 5375
40 Ga0207709_10025551 3300025935 Bacteria 3383
41 Ga0207704_10012681 3300025938 Bacteria 4188
42 Ga0207711_10000670 3300025941 Bacteria 34027
43 Ga0207648_10161895 3300026089 Bacteria 1976
44 Ga0268266_10029561 3300028379 Bacteria 4658
45 Ga0307513_10000003 3300031456 Bacteria 590921
46 Ga0307408_100017469 3300031548 Bacteria 4801
47 Ga0307408_100030439 3300031548 Bacteria 3748
48 Ga0307408_100041818 3300031548 Bacteria 3251
49 Ga0307408_100127982 3300031548 Bacteria 1977
50 Ga0307514_10003200 3300031649 Bacteria 15992
51 Ga0307413_10005886 3300031824 Bacteria 5536
52 Ga0307413_10014607 3300031824 Bacteria 3995
53 Ga0307413_10075233 3300031824 Bacteria 2142
54 Ga0307410_10002887 3300031852 Bacteria 8461
55 Ga0307410_10119263 3300031852 Bacteria 1921
56 Ga0307406_10000311 3300031901 Bacteria 28306
57 Ga0307406_10000387 3300031901 Bacteria 25468
58 Ga0307407_10027498 3300031903 Bacteria 3028
59 Ga0307407_10038459 3300031903 Bacteria 2652
60 Ga0307407_10061248 3300031903 Bacteria 2199
61 Ga0307407_10066882 3300031903 Bacteria 2121
62 Ga0307412_10005640 3300031911 Bacteria 7029
63 Ga0307412_10019307 3300031911 Bacteria 4124
64 Ga0307412_10034731 3300031911 Bacteria 3215
65 Ga0307412_10070298 3300031911 Bacteria 2386
66 Ga0307412_10110267 3300031911 Bacteria 1963
67 Ga0307409_100009788 3300031995 Bacteria 5911
68 Ga0307409_100127695 3300031995 Bacteria 2166
69 Ga0307416_100008478 3300032002 Bacteria 6637
70 Ga0307416_100030577 3300032002 Bacteria 4043
71 Ga0307411_10018865 3300032005 Bacteria 3969
72 Ga0307415_100040160 3300032126 Bacteria 3098
73 Ga0395899_0023719 3300037312 Bacteria 4643
74 Ga0395899_0064548 3300037312 Bacteria 2692
75 Ga0395900_0017062 3300037418 Bacteria 7412
76 Ga0395900_0034823 3300037418 Bacteria 5187
77 Ga0395898_0009048 3300037466 Bacteria 10486
78 Ga0395901_0135218 3300038443 Bacteria 2591
79 Ga0439436_0001019 3300041404 Bacteria 7831
80 Ga0439466_0005645 3300041411 Bacteria 4770
81 Ga0439442_003919 3300042002 Bacteria 2951
82 Ga0439449_0004662 3300042007 Bacteria 5293
83 Ga0439449_0018938 3300042007 Bacteria 2581
84 Ga0466970_0031022 3300044765 Bacteria 2821
85 Ga0466960_0058068 3300044901 Bacteria 1889
86 Ga0495627_001168 3300046453 Bacteria 16769
87 Ga0495650_0054838 3300046471 Bacteria 1625
88 Ga0495580_0033218 3300046472 Bacteria 3718
89 Ga0495639_0006850 3300046475 Bacteria 4898
90 Ga0495662_0006947 3300046476 Bacteria 5625
91 Ga0495664_0020993 3300046477 Bacteria 3770
92 Ga0495665_0002444 3300046531 Bacteria 10031
93 Ga0495587_0000831 3300046536 Bacteria 20411
94 Ga0495645_0001753 3300046543 Bacteria 14748
95 Ga0495667_0026840 3300046559 Bacteria 3880
96 Ga0495588_0004169 3300046674 Bacteria 6373
97 Ga0495588_0039790 3300046674 Bacteria 2396
98 Ga0496102_0114286 3300048905 Bacteria 2518
99 Ga0496103_0016844 3300048906 Bacteria 4365
100 Ga0496103_0039363 3300048906 Bacteria 2905
101 Ga0496106_0021425 3300048909 Bacteria 4799
102 Ga0496112_0063494 3300048915 Bacteria 3643
103 Ga0496117_0001045 3300048920 Bacteria 42245
104 Ga0496117_0009898 3300048920 Bacteria 8775
105 Ga0496117_0089602 3300048920 Bacteria 1986
106 Ga0496118_0001725 3300048921 Bacteria 31843
107 Ga0496118_0009385 3300048921 Bacteria 9899
108 Ga0496119_0001137 3300048922 Bacteria 33415
109 Ga0496122_0021356 3300048925 Bacteria 5799
110 Ga0496124_0000075 3300048927 Bacteria 218086
111 Ga0496125_0009267 3300048928 Bacteria 10162
112 Ga0496125_0011379 3300048928 Bacteria 8906
113 Ga0496125_0012710 3300048928 Bacteria 8329
114 Ga0496126_0027120 3300048929 Bacteria 5478
115 Ga0496126_0033793 3300048929 Bacteria 4810
116 Ga0501318_001049 3300049534 Bacteria 2034
117 Ga0501032_0016025 3300049569 Bacteria 5277
118 Ga0501032_0024460 3300049569 Bacteria 4170
119 Ga0501034_0004649 3300049571 Bacteria 15201
120 Ga0501037_0080563 3300049573 Bacteria 2362
121 Ga0501070_0000951 3300049586 Bacteria 26149
122 Ga0501044_0002632 3300049823 Bacteria 20418
123 Ga0501044_0143164 3300049823 Bacteria 2378
124 nmdc:mga00v17_30537_c2 3300050491 Bacteria 2710
125 nmdc:mga00v17_45146_c1 3300050491 Bacteria 2661
126 nmdc:mga0yw44_41350_c1 3300050492 Bacteria 2744
127 nmdc:mga0sz30_1874_c1 3300050516 Bacteria 7495
128 Ga0495655_0000592 3300053083 Bacteria 5942
129 Ga0500556_0000059 3300053104 Bacteria 112837
130 Ga0500556_0000247 3300053104 Bacteria 43841
131 Ga0500562_001587 3300053108 Bacteria 5653
132 Ga0500593_000608 3300053117 Bacteria 13765
133 Ga0500655_002020 3300053133 Bacteria 3775
134 Ga0500559_0000539 3300053136 Bacteria 26232
135 Ga0500559_0000889 3300053136 Bacteria 19130
136 Ga0500568_0000012 3300053139 Bacteria 225711
137 Ga0500568_0000327 3300053139 Bacteria 37336
138 Ga0500573_0000024 3300053140 Bacteria 151713
139 Ga0500573_0013253 3300053140 Bacteria 4642
140 2966925214 2966924647 Bacteria 3268643
141 2548693962 2547132424 Bacteria 8348532
142 2552110509 2551306166 Bacteria 9731570
143 2555229660 2554235227 Bacteria 3637389
144 2587862219 2585428094 Bacteria 3604039
145 2643734761 2643221542 Bacteria 3563959
146 2643785023 2643221553 Bacteria 3544260
147 2643846552 2643221566 Bacteria 3460379
148 2643875701 2643221572 Bacteria 3614809
149 2644172920 2643221630 Bacteria 3601215
150 2644279947 2643221649 Bacteria 3867359
151 2644382756 2643221669 Bacteria 3611286
152 2644516388 2643221692 Bacteria 7282860
153 2644679177 2643221724 Bacteria 3593515
154 2691513226 2690315906 Bacteria 4517044
155 2723640601 2721755702 Bacteria 4373124
156 2730228680 2728369380 Bacteria 3620317
157 2747951851 2747842429 Bacteria 3914386
158 2753300477 2751185788 Bacteria 4541048
159 2775656413 2775506735 Bacteria 4556596
160 2808830471 2808606357 Bacteria 4466944
161 2808851664 2808606360 Bacteria 4404006
162 2808875856 2808606366 Bacteria 4415912
163 2808894733 2808606370 Bacteria 4942454
164 2812317773 2811994871 Bacteria 4497550
165 2812321919 2811994872 Bacteria 4121241
166 2812365590 2811994880 Bacteria 4147780
167 2852645953 2852643534 Bacteria 3013378
168 2852665924 2852663356 Bacteria 4090475
169 2857726201 2857723135 Bacteria 4217853
170 2857734619 2857733635 Bacteria 3532004
171 2857740486 2857740372 Bacteria 4782044
172 2866556984 2866552031 Bacteria 5824618
173 2870631182 2870628048 Bacteria 3696012
174 2895663266 2895660088 Bacteria 3782833
175 2904433833 2904430863 Bacteria 3486923
176 2904499372 2904497146 Bacteria 4731781
177 2904502359 2904501621 Bacteria 3401437
178 2904778475 2904776348 Bacteria 4658726
179 2908677371 2908674828 Bacteria 3382763
180 2909076067 2909074476 Bacteria 3436050
181 2910810375 2910809715 Bacteria 4982797
182 2919035832 2919034639 Bacteria 4763403
183 2919041923 2919039151 Bacteria 3391018
184 2919044100 2919042368 Bacteria 3905917
185 2919392151 2919391150 Bacteria 4884741
186 2919397950 2919395869 Bacteria 3704152
187 2919538956 2919538618 Bacteria 4677069
188 2920882693 2920879853 Bacteria 4216831
189 2928107637 2928104781 Bacteria 3877447
190 2928124268 2928121344 Bacteria 3972376
191 2928502565 2928500415 Bacteria 3384541
192 2932427537 2932426870 Bacteria 4547726
193 2933418874 2933418574 Bacteria 4476724
194 2935410096 2935409751 Bacteria 4179611
195 2939659873 2939657138 Bacteria 3740283
196 2939660848 2939660829 Bacteria 3784848
197 2939677119 2939674588 Bacteria 4844420
198 2945919841 2945916053 Bacteria 4555517
199 2945924257 2945920336 Bacteria 4501603
200 2945944024 2945941187 Bacteria 4682474
201 2945957790 2945956166 Bacteria 5110334
202 2946003762 2946003308 Bacteria 3857229
203 2946025164 2946024296 Bacteria 3508095
204 2946039980 2946037020 Bacteria 4900426
205 2946063567 2946059875 Bacteria 4386623
206 2984552587 2984551494 Bacteria 3877562
207 8004023720 8004021418 Bacteria 4313954
208 8004028923 8004025490 Bacteria 4327753
209 8004183467 8004182704 Bacteria 3391155
210 8046355047 8046352972 Bacteria 3613806
211 8055035085 8055034563 Bacteria 3562128
212 8055038241 8055037949 Bacteria 3337834
213 8056213529 8056207758 Bacteria 8639239
214 LJQas_1002772
215 JGI25154J39366_1001573
216 JGI25152J39213_1000411
217 Ga0007423J48922_100772
218 rootH1_10012224
219 Ga0006562J51391_1052846
220 Ga0006562J51391_1052850
221 Ga0065714_10069295
222 Ga0070674_100028211
223 Ga0070667_100040948
224 Ga0068866_10024068
225 Ga0070717_10059696
226 Ga0075365_10006034
227 Ga0075364_10007086
228 Ga0075364_10035308
229 Ga0075369_10001024
230 Ga0075369_10003754
231 Ga0068865_100044111
232 Ga0105244_10017979
233 Ga0105244_10020956
234 Ga0105243_10026045
235 Ga0105243_10038678
236 Ga0105248_10000619
237 Ga0105246_10071374
238 Ga0157371_10029176
239 Ga0157370_10006052
240 Ga0157370_10124909
241 Ga0157369_10001451
242 Ga0171462_1005
243 Ga0157378_10024741
244 Ga0157372_10143126
245 Ga0209646_1000088
246 Ga0209129_1000059
247 Ga0209025_1000782
248 Ga0209051_1002951
249 Ga0207697_10008002
250 Ga0207655_1010288
251 Ga0207655_1012726
252 Ga0207709_10009410
253 Ga0207709_10025551
254 Ga0207704_10012681
255 Ga0207711_10000670
256 Ga0207648_10161895
257 Ga0268266_10029561
258 Ga0307513_10000003
259 Ga0307408_100017469
260 Ga0307408_100030439
261 Ga0307408_100041818
262 Ga0307408_100127982
263 Ga0307514_10003200
264 Ga0307413_10005886
265 Ga0307413_10014607
266 Ga0307413_10075233
267 Ga0307410_10002887
268 Ga0307410_10119263
269 Ga0307406_10000311
270 Ga0307406_10000387
271 Ga0307407_10027498
272 Ga0307407_10038459
273 Ga0307407_10061248
274 Ga0307407_10066882
275 Ga0307412_10005640
276 Ga0307412_10019307
277 Ga0307412_10034731
278 Ga0307412_10070298
279 Ga0307412_10110267
280 Ga0307409_100009788
281 Ga0307409_100127695
282 Ga0307416_100008478
283 Ga0307416_100030577
284 Ga0307411_10018865
285 Ga0307415_100040160
286 Ga0395899_0023719
287 Ga0395899_0064548
288 Ga0395900_0017062
289 Ga0395900_0034823
290 Ga0395898_0009048
291 Ga0395901_0135218
292 Ga0439436_0001019
293 Ga0439466_0005645
294 Ga0439442_003919
295 Ga0439449_0004662
296 Ga0439449_0018938
297 Ga0466970_0031022
298 Ga0466960_0058068
299 Ga0495627_001168
300 Ga0495650_0054838
301 Ga0495580_0033218
302 Ga0495639_0006850
303 Ga0495662_0006947
304 Ga0495664_0020993
305 Ga0495665_0002444
306 Ga0495587_0000831
307 Ga0495645_0001753
308 Ga0495667_0026840
309 Ga0495588_0004169
310 Ga0495588_0039790
311 Ga0496102_0114286
312 Ga0496103_0016844
313 Ga0496103_0039363
314 Ga0496106_0021425
315 Ga0496112_0063494
316 Ga0496117_0001045
317 Ga0496117_0009898
318 Ga0496117_0089602
319 Ga0496118_0001725
320 Ga0496118_0009385
321 Ga0496119_0001137
322 Ga0496122_0021356
323 Ga0496124_0000075
324 Ga0496125_0009267
325 Ga0496125_0011379
326 Ga0496125_0012710
327 Ga0496126_0027120
328 Ga0496126_0033793
329 Ga0501318_001049
330 Ga0501032_0016025
331 Ga0501032_0024460
332 Ga0501034_0004649
333 Ga0501037_0080563
334 Ga0501070_0000951
335 Ga0501044_0002632
336 Ga0501044_0143164
337 nmdc:mga00v17_30537_c2
338 nmdc:mga00v17_45146_c1
339 nmdc:mga0yw44_41350_c1
340 nmdc:mga0sz30_1874_c1
341 Ga0495655_0000592
342 Ga0500556_0000059
343 Ga0500556_0000247
344 Ga0500562_001587
345 Ga0500593_000608
346 Ga0500655_002020
347 Ga0500559_0000539
348 Ga0500559_0000889
349 Ga0500568_0000012
350 Ga0500568_0000327
351 Ga0500573_0000024
352 Ga0500573_0013253
353 2966925214
354 2548693962
355 2552110509
356 2555229660
357 2587862219
358 2643734761
359 2643785023
360 2643846552
361 2643875701
362 2644172920
363 2644279947
364 2644382756
365 2644516388
366 2644679177
367 2691513226
368 2723640601
369 2730228680
370 2747951851
371 2753300477
372 2775656413
373 2808830471
374 2808851664
375 2808875856
376 2808894733
377 2812317773
378 2812321919
379 2812365590
380 2852645953
381 2852665924
382 2857726201
383 2857734619
384 2857740486
385 2866556984
386 2870631182
387 2895663266
388 2904433833
389 2904499372
390 2904502359
391 2904778475
392 2908677371
393 2909076067
394 2910810375
395 2919035832
396 2919041923
397 2919044100
398 2919392151
399 2919397950
400 2919538956
401 2920882693
402 2928107637
403 2928124268
404 2928502565
405 2932427537
406 2933418874
407 2935410096
408 2939659873
409 2939660848
410 2939677119
411 2945919841
412 2945924257
413 2945944024
414 2945957790
415 2946003762
416 2946025164
417 2946039980
418 2946063567
419 2984552587
420 8004023720
421 8004028923
422 8004183467
423 8046355047
424 8055035085
425 8055038241
426 8056213529

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

23

417

0.9

PF00083

Sugar_tr

Sugar (and other) transporter

30

185

0.86

PF06609

TRI12

Fungal trichothecene efflux pump (TRI12)

11

506

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
8pnl-assembly2.cif.gz_C outward-open conformation of a major facilitator superfamily (mfs) transporter mhas2168, a homologue of rv1410 from m. tuberculosis, in complex with an alpaca nanobody 0.8338 20 443
7lo8-assembly1.cif.gz_Z nora in complex with fab36 0.828 17 447
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.8181 16 463
7ckr-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate bay-8002 in the outward-open conformation. 0.8167 22 445
7lo8-assembly1.cif.gz_Z nora in complex with fab36 0.8155 17 447
ID Description Score Start End Superfamily
af_Q04301_34_211_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9718 22 194 1.20.1250.20
af_Q86M88_601_814_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9632 23 220 1.20.1250.20
af_Q2G2W1_141_346_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9555 25 223 1.20.1250.20
af_P9WG85_29_254_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9551 25 249 1.20.1250.20
af_Q9HE13_92_349_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9523 25 274 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A358L8V1-F1-model_v4 EmrB/QacA family drug resistance transporter 0.9622 21 200 GO:0005886
GO:0022857
AF-A0A094BGB3-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9422 19 208 GO:0005682
GO:0016020
GO:0022857
AF-A0A0F4Z2X5-F1-model_v4 Bcmfs1, multidrug efflux transporter 0.9285 19 304 GO:0005886
GO:0022857
AF-A0A3D1QCW4-F1-model_v4 MFS transporter 0.9242 20 235 GO:0005886
GO:0022857
AF-A0A7K3L487-F1-model_v4 MFS transporter 0.9199 17 251 GO:0016020
GO:0022857

Map