F324652

General Info

Members Datasets Scaffolds Average Seq Length
213 157 426 677

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2966924647|2966927521
Length 754
Sequence TRSPKRWLIGEPLPSEKLEGQLLPKHLALPIFASDPLSSVAYAPQELLMILLIGGLGFLTLAPWVAVAVVVLLLVVVASYRQLIKAYPSGGGDYEVAHKNLGEKAGLVVASALLVDYVMTVAVSVASGVDNIISAVPELAPVRVELAIFFVVLLAAVNLRGVRESSKAFAIPTYLFVSSVFVMIVIALVRTALGDPPVAESAEYTVQADQLTQAAFILLLLRAFSSGCSALTGVEAIANGVPAFRRPKVQNAQKTLVLMGSIAIVLFAGLVAVALIAKVHYAEDACDLQGFVDCATTPQRSLVAQIASAVFGGSLFGIPFYVIQACTAAVLLLAANTAFNGFPLLGSILARDQYAPKALNTRGDRLIYSNGVIVLALVACAILLVYQASVTGLIQLYIIGVFVSFTLGQTGMVVHWTRMLREGCADRGAVYRARGINAFGALLTASVLIVVTVTKFTHGAWLVFVIMPILFVLMLGVNRYYRDVLVEIEPDATTQFGSHGDHAIVLVGTMQKPVLKALDYAIAARHESLEAIHVGIDDEATALLQRQWAEQDIEVPLRIVASPYRDISMPLIKYIKAHREEHGSEVVTVYTPIYIVGHWWEAALHNHKSRRIRQKLMLVHGVTISLVPWLLDSSEVLYGRRSRPIPGQDRRGEPIRPRPVPRRVLEPAGRRSGAAGGALGADAGPDGRAGAAVEGGAVQRGLDVQPAQNGTKPGPKQTPRAPGSAAGNRGGGAAARKARSAARNSTGTSPRKKK

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
6 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
7 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
8 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
9 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
10 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
11 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
24 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
32 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
43 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
44 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
48 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
65 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
66 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
69 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
70 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
71 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
72 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
73 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
74 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
75 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
76 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
77 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
78 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
79 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
80 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
81 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
82 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
83 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
84 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
85 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
86 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
87 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
88 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
89 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
101 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
102 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
103 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
104 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
105 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
108 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
109 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
110 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
111 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
112 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
113 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
114 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
115 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
116 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
117 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
118 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
119 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
120 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
121 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
122 2643221549 Agromyces sp. Root1464 Isolate Unclassified
123 2643221572 Leifsonia sp. Root60 Isolate Unclassified
124 2643221616 Leifsonia sp. Root227 Isolate Unclassified
125 2643221619 Agromyces sp. Root81 Isolate Unclassified
126 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
127 2643221649 Leifsonia sp. Root4 Isolate Unclassified
128 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
129 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
130 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
131 2808606372 Agromyces sp. 23-23 Isolate Unclassified
132 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
133 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
134 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
135 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
136 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
137 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
138 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
139 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
140 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
141 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
142 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
143 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
144 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
145 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
146 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
147 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
148 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
149 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
150 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
151 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
152 2928153084 Leifsonia sp. 563 Isolate Unclassified
153 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
154 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
155 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
156 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
157 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.69
Metatranscriptomes 0.47
Isolates 17.84

Biome Distribution

Category Percentage (%)
Aerial Root 0.47
Bulb 0
Endosphere 23.47
Nodule 0
Rhizoplane 2.82
Rhizosphere 56.81
Stem 0
Stem Tuber 0.47
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10008624 3300001979 Bacteria 4050
2 JGI24735J21928_10002290 3300002067 Bacteria 6679
3 JGI25164J39214_1000466 3300002772 Bacteria 20425
4 JGI25165J46597_1000107 3300003214 Bacteria 150846
5 Ga0055539_1000019 3300003752 Bacteria 341727
6 Ga0055533_1000023 3300003756 Bacteria 341727
7 Ga0055525_1000326 3300003759 Bacteria 36948
8 Ga0055527_1000025 3300003760 Bacteria 195817
9 Ga0055542_1000048 3300003762 Bacteria 195800
10 Ga0055529_1000057 3300003763 Bacteria 195807
11 Ga0065714_10007669 3300005288 Bacteria 2786
12 Ga0070661_100048659 3300005344 Bacteria 3103
13 Ga0070667_100007227 3300005367 Bacteria 9225
14 Ga0068853_100073540 3300005539 Bacteria 2980
15 Ga0070672_100002384 3300005543 Bacteria 11893
16 Ga0068855_100008954 3300005563 Bacteria 12101
17 Ga0068855_100042331 3300005563 Bacteria 5396
18 Ga0068856_100045861 3300005614 Bacteria 4304
19 Ga0068852_100032816 3300005616 Bacteria 4303
20 Ga0068861_100065938 3300005719 Bacteria 2790
21 Ga0068851_10000030 3300005834 Bacteria 114502
22 Ga0068858_100000519 3300005842 Bacteria 40469
23 Ga0075365_10008401 3300006038 Bacteria 5858
24 Ga0075364_10026863 3300006051 Bacteria 3675
25 Ga0075369_10002389 3300006186 Bacteria 6691
26 Ga0105240_10001647 3300009093 Bacteria 37919
27 Ga0105240_10051428 3300009093 Bacteria 5184
28 Ga0105241_10000930 3300009174 Bacteria 22169
29 Ga0105248_10006002 3300009177 Bacteria 13329
30 Ga0105237_10005620 3300009545 Bacteria 14128
31 Ga0105237_10009246 3300009545 Bacteria 10567
32 Ga0105238_10025216 3300009551 Bacteria 6060
33 Ga0105238_10026173 3300009551 Bacteria 5945
34 Ga0105239_10067064 3300010375 Bacteria 3941
35 Ga0105239_10074984 3300010375 Bacteria 3719
36 Ga0105246_10065068 3300011119 Bacteria 2549
37 Ga0157371_10005790 3300013102 Bacteria 10347
38 Ga0157369_10000311 3300013105 Bacteria 65381
39 Ga0157369_10052638 3300013105 Bacteria 4404
40 Ga0163163_10073164 3300014325 Bacteria 3417
41 Ga0157380_10019256 3300014326 Bacteria 5086
42 Ga0206353_10537306 3300020082 Bacteria 9888
43 Ga0209566_100031 3300025225 Bacteria 341555
44 Ga0209674_100001 3300025226 Bacteria 4013750
45 Ga0209672_100011 3300025228 Bacteria 856297
46 Ga0209147_100659 3300025229 Bacteria 17887
47 Ga0209563_100001 3300025230 Bacteria 4013775
48 Ga0209563_101126 3300025230 Bacteria 7564
49 Ga0207427_100028 3300025231 Bacteria 388949
50 Ga0209437_101461 3300025233 Bacteria 5714
51 Ga0209258_101243 3300025242 Bacteria 9815
52 Ga0209677_100001 3300025253 Bacteria 4013787
53 Ga0209677_100688 3300025253 Bacteria 17287
54 Ga0209148_1000023 3300025254 Bacteria 680511
55 Ga0209148_1002239 3300025254 Bacteria 7050
56 Ga0209233_1000001 3300025261 Bacteria 2992747
57 Ga0209455_1000023 3300025272 Bacteria 680449
58 Ga0207656_10000001 3300025321 Bacteria 1323684
59 Ga0207705_10000001 3300025909 Bacteria 2061880
60 Ga0207705_10026650 3300025909 Bacteria 4120
61 Ga0207654_10000001 3300025911 Bacteria 1816198
62 Ga0207695_10001176 3300025913 Bacteria 45158
63 Ga0207695_10018164 3300025913 Bacteria 8139
64 Ga0207671_10000001 3300025914 Bacteria 1318881
65 Ga0207671_10006402 3300025914 Bacteria 10494
66 Ga0207657_10004932 3300025919 Bacteria 14031
67 Ga0207694_10000127 3300025924 Bacteria 79064
68 Ga0207690_10003277 3300025932 Bacteria 9701
69 Ga0207690_10049153 3300025932 Bacteria 2810
70 Ga0207691_10031704 3300025940 Bacteria 4931
71 Ga0207711_10002434 3300025941 Bacteria 16611
72 Ga0207667_10003826 3300025949 Bacteria 18504
73 Ga0207667_10005658 3300025949 Bacteria 15239
74 Ga0207667_10032242 3300025949 Bacteria 5648
75 Ga0207703_10000813 3300026035 Bacteria 30797
76 Ga0207674_10005504 3300026116 Bacteria 15036
77 Ga0207675_100032725 3300026118 Bacteria 4844
78 Ga0207698_10000514 3300026142 Bacteria 22487
79 Ga0207698_10002116 3300026142 Bacteria 11709
80 Ga0207698_10075358 3300026142 Bacteria 2696
81 Ga0307514_10009680 3300031649 Bacteria 8084
82 Ga0395899_0007395 3300037312 Bacteria 8490
83 Ga0395898_0000100 3300037466 Bacteria 226446
84 Ga0395901_0123848 3300038443 Bacteria 2716
85 Ga0451793_0303969 3300041452 Bacteria 3891
86 Ga0466965_0000017 3300044683 Bacteria 72634
87 Ga0466970_0023304 3300044765 Bacteria 3232
88 Ga0466960_0012473 3300044901 Bacteria 3587
89 Ga0466960_0016717 3300044901 Bacteria 3187
90 Ga0466959_0054858 3300045049 Bacteria 2910
91 Ga0466959_0073125 3300045049 Bacteria 2480
92 Ga0466958_0022943 3300045836 Bacteria 3659
93 Ga0495650_0000130 3300046471 Bacteria 175669
94 Ga0495672_0008076 3300047320 Bacteria 7818
95 Ga0495672_0020536 3300047320 Bacteria 4324
96 Ga0496101_0011758 3300048904 Bacteria 5819
97 Ga0496102_0061957 3300048905 Bacteria 3425
98 Ga0496103_0029642 3300048906 Bacteria 3326
99 Ga0496105_0055506 3300048908 Bacteria 3270
100 Ga0496115_0032681 3300048918 Bacteria 4105
101 Ga0496117_0000071 3300048920 Bacteria 242170
102 Ga0496117_0002143 3300048920 Bacteria 25767
103 Ga0496117_0007517 3300048920 Bacteria 10622
104 Ga0496117_0017930 3300048920 Bacteria 5894
105 Ga0496117_0019684 3300048920 Bacteria 5533
106 Ga0496118_0000229 3300048921 Bacteria 98023
107 Ga0496118_0008615 3300048921 Bacteria 10496
108 Ga0496119_0000752 3300048922 Bacteria 43531
109 Ga0496119_0012082 3300048922 Bacteria 7054
110 Ga0496120_0002713 3300048923 Bacteria 17315
111 Ga0496120_0009740 3300048923 Bacteria 6778
112 Ga0496121_0000046 3300048924 Bacteria 335942
113 Ga0496121_0077431 3300048924 Bacteria 2648
114 Ga0496122_0002895 3300048925 Bacteria 23479
115 Ga0496124_0000301 3300048927 Bacteria 91222
116 Ga0496124_0053896 3300048927 Bacteria 3406
117 Ga0496126_0014749 3300048929 Bacteria 7884
118 Ga0501031_0019065 3300049568 Bacteria 4466
119 Ga0501032_0020178 3300049569 Bacteria 4645
120 Ga0501033_0016611 3300049570 Bacteria 5568
121 Ga0501034_0014072 3300049571 Bacteria 8242
122 Ga0501034_0061726 3300049571 Bacteria 3764
123 Ga0501036_0007209 3300049572 Bacteria 9054
124 Ga0501036_0043866 3300049572 Bacteria 3787
125 Ga0501037_0001410 3300049573 Bacteria 17628
126 Ga0501037_0008273 3300049573 Bacteria 7629
127 Ga0501037_0016118 3300049573 Bacteria 5500
128 Ga0501038_0003400 3300049574 Bacteria 14836
129 Ga0501039_0001618 3300049575 Bacteria 16597
130 Ga0501043_0000744 3300049579 Bacteria 28887
131 Ga0501046_0011064 3300049580 Bacteria 7727
132 Ga0501047_0000858 3300049581 Bacteria 31137
133 Ga0501047_0031708 3300049581 Bacteria 5098
134 Ga0501047_0041046 3300049581 Bacteria 4472
135 Ga0501047_0071984 3300049581 Bacteria 3327
136 Ga0501070_0000304 3300049586 Bacteria 45492
137 Ga0501070_0001408 3300049586 Bacteria 21520
138 Ga0501070_0028749 3300049586 Bacteria 4661
139 Ga0501070_0068868 3300049586 Bacteria 2929
140 Ga0501070_0082840 3300049586 Bacteria 2655
141 Ga0501071_0030601 3300049587 Bacteria 3808
142 Ga0501073_0000046 3300049589 Bacteria 78180
143 Ga0501073_0047331 3300049589 Bacteria 3023
144 Ga0501080_0001128 3300049742 Bacteria 21976
145 Ga0501083_0000026 3300049744 Bacteria 119076
146 Ga0501083_0010029 3300049744 Bacteria 6683
147 Ga0501035_0012311 3300049822 Bacteria 7908
148 Ga0501035_0021304 3300049822 Bacteria 5959
149 Ga0501044_0004629 3300049823 Bacteria 15399
150 Ga0501044_0061079 3300049823 Bacteria 3856
151 nmdc:mga00v17_2357_c1 3300050491 Bacteria 9671
152 nmdc:mga0sz30_931_c1 3300050516 Bacteria 3689
153 Ga0500635_0000445 3300053080 Bacteria 11944
154 Ga0500643_000247 3300053087 Bacteria 49734
155 Ga0500651_0000109 3300053093 Bacteria 50554
156 Ga0500556_0000059 3300053104 Bacteria 112837
157 Ga0500556_0000986 3300053104 Bacteria 15077
158 Ga0500559_0000582 3300053136 Bacteria 25086
159 Ga0500559_0000882 3300053136 Bacteria 19196
160 Ga0500559_0001219 3300053136 Bacteria 15230
161 Ga0500559_0002455 3300053136 Bacteria 9591
162 Ga0500568_0000012 3300053139 Bacteria 225711
163 Ga0500568_0000623 3300053139 Bacteria 25529
164 Ga0500568_0001301 3300053139 Bacteria 16389
165 Ga0500568_0002170 3300053139 Bacteria 11826
166 Ga0500568_0004306 3300053139 Bacteria 7639
167 Ga0500573_0000005 3300053140 Bacteria 315762
168 Ga0500573_0003546 3300053140 Bacteria 8088
169 Ga0500573_0005427 3300053140 Bacteria 6827
170 Ga0500573_0026214 3300053140 Bacteria 3350
171 Ga0500577_0005777 3300053142 Bacteria 3365
172 Ga0500616_0000317 3300053153 Bacteria 69238
173 Ga0500616_0001010 3300053153 Bacteria 30144
174 Ga0500645_002462 3300053730 Bacteria 8218
175 Ga0501082_0003651 3300060353 Bacteria 13437
176 2966927521 2966924647 Bacteria 3268643
177 2587864597 2585428094 Bacteria 3604039
178 2643769040 2643221549 Bacteria 4042819
179 2643876868 2643221572 Bacteria 3614809
180 2644097888 2643221616 Bacteria 4066575
181 2644112503 2643221619 Bacteria 4158469
182 2644182100 2643221632 Bacteria 3406696
183 2644278156 2643221649 Bacteria 3867359
184 2644383923 2643221669 Bacteria 3611286
185 2723643629 2721755702 Bacteria 4373124
186 2753300783 2751185788 Bacteria 4541048
187 2808900465 2808606372 Bacteria 4649509
188 2844843677 2844841374 Bacteria 3917147
189 2844853190 2844852863 Bacteria 3849151
190 2852644153 2852643534 Bacteria 3013378
191 2857733001 2857729791 Bacteria 4040535
192 2857734861 2857733635 Bacteria 3532004
193 2857739045 2857737099 Bacteria 3104305
194 2862993782 2862993130 Bacteria 3860849
195 2870625496 2870622029 Bacteria 3643329
196 2884766848 2884763398 Bacteria 4091164
197 2895663068 2895660088 Bacteria 3782833
198 2904504684 2904501621 Bacteria 3401437
199 2908674888 2908674828 Bacteria 3382763
200 2909075794 2909074476 Bacteria 3436050
201 2919041058 2919039151 Bacteria 3391018
202 2919046062 2919042368 Bacteria 3905917
203 2919055680 2919055335 Bacteria 3875751
204 2919445069 2919443155 Bacteria 4072969
205 2919525776 2919523602 Bacteria 3788128
206 2928106686 2928104781 Bacteria 3877447
207 2928121697 2928121344 Bacteria 3972376
208 2928153819 2928153084 Bacteria 4020257
209 2928501856 2928500415 Bacteria 3384541
210 2935413279 2935409751 Bacteria 4179611
211 2984552852 2984551494 Bacteria 3877562
212 8056038470 8056037122 Bacteria 3854319
213 8057346218 8057345674 Bacteria 4160394
214 JGI24740J21852_10008624
215 JGI24735J21928_10002290
216 JGI25164J39214_1000466
217 JGI25165J46597_1000107
218 Ga0055539_1000019
219 Ga0055533_1000023
220 Ga0055525_1000326
221 Ga0055527_1000025
222 Ga0055542_1000048
223 Ga0055529_1000057
224 Ga0065714_10007669
225 Ga0070661_100048659
226 Ga0070667_100007227
227 Ga0068853_100073540
228 Ga0070672_100002384
229 Ga0068855_100008954
230 Ga0068855_100042331
231 Ga0068856_100045861
232 Ga0068852_100032816
233 Ga0068861_100065938
234 Ga0068851_10000030
235 Ga0068858_100000519
236 Ga0075365_10008401
237 Ga0075364_10026863
238 Ga0075369_10002389
239 Ga0105240_10001647
240 Ga0105240_10051428
241 Ga0105241_10000930
242 Ga0105248_10006002
243 Ga0105237_10005620
244 Ga0105237_10009246
245 Ga0105238_10025216
246 Ga0105238_10026173
247 Ga0105239_10067064
248 Ga0105239_10074984
249 Ga0105246_10065068
250 Ga0157371_10005790
251 Ga0157369_10000311
252 Ga0157369_10052638
253 Ga0163163_10073164
254 Ga0157380_10019256
255 Ga0206353_10537306
256 Ga0209566_100031
257 Ga0209674_100001
258 Ga0209672_100011
259 Ga0209147_100659
260 Ga0209563_100001
261 Ga0209563_101126
262 Ga0207427_100028
263 Ga0209437_101461
264 Ga0209258_101243
265 Ga0209677_100001
266 Ga0209677_100688
267 Ga0209148_1000023
268 Ga0209148_1002239
269 Ga0209233_1000001
270 Ga0209455_1000023
271 Ga0207656_10000001
272 Ga0207705_10000001
273 Ga0207705_10026650
274 Ga0207654_10000001
275 Ga0207695_10001176
276 Ga0207695_10018164
277 Ga0207671_10000001
278 Ga0207671_10006402
279 Ga0207657_10004932
280 Ga0207694_10000127
281 Ga0207690_10003277
282 Ga0207690_10049153
283 Ga0207691_10031704
284 Ga0207711_10002434
285 Ga0207667_10003826
286 Ga0207667_10005658
287 Ga0207667_10032242
288 Ga0207703_10000813
289 Ga0207674_10005504
290 Ga0207675_100032725
291 Ga0207698_10000514
292 Ga0207698_10002116
293 Ga0207698_10075358
294 Ga0307514_10009680
295 Ga0395899_0007395
296 Ga0395898_0000100
297 Ga0395901_0123848
298 Ga0451793_0303969
299 Ga0466965_0000017
300 Ga0466970_0023304
301 Ga0466960_0012473
302 Ga0466960_0016717
303 Ga0466959_0054858
304 Ga0466959_0073125
305 Ga0466958_0022943
306 Ga0495650_0000130
307 Ga0495672_0008076
308 Ga0495672_0020536
309 Ga0496101_0011758
310 Ga0496102_0061957
311 Ga0496103_0029642
312 Ga0496105_0055506
313 Ga0496115_0032681
314 Ga0496117_0000071
315 Ga0496117_0002143
316 Ga0496117_0007517
317 Ga0496117_0017930
318 Ga0496117_0019684
319 Ga0496118_0000229
320 Ga0496118_0008615
321 Ga0496119_0000752
322 Ga0496119_0012082
323 Ga0496120_0002713
324 Ga0496120_0009740
325 Ga0496121_0000046
326 Ga0496121_0077431
327 Ga0496122_0002895
328 Ga0496124_0000301
329 Ga0496124_0053896
330 Ga0496126_0014749
331 Ga0501031_0019065
332 Ga0501032_0020178
333 Ga0501033_0016611
334 Ga0501034_0014072
335 Ga0501034_0061726
336 Ga0501036_0007209
337 Ga0501036_0043866
338 Ga0501037_0001410
339 Ga0501037_0008273
340 Ga0501037_0016118
341 Ga0501038_0003400
342 Ga0501039_0001618
343 Ga0501043_0000744
344 Ga0501046_0011064
345 Ga0501047_0000858
346 Ga0501047_0031708
347 Ga0501047_0041046
348 Ga0501047_0071984
349 Ga0501070_0000304
350 Ga0501070_0001408
351 Ga0501070_0028749
352 Ga0501070_0068868
353 Ga0501070_0082840
354 Ga0501071_0030601
355 Ga0501073_0000046
356 Ga0501073_0047331
357 Ga0501080_0001128
358 Ga0501083_0000026
359 Ga0501083_0010029
360 Ga0501035_0012311
361 Ga0501035_0021304
362 Ga0501044_0004629
363 Ga0501044_0061079
364 nmdc:mga00v17_2357_c1
365 nmdc:mga0sz30_931_c1
366 Ga0500635_0000445
367 Ga0500643_000247
368 Ga0500651_0000109
369 Ga0500556_0000059
370 Ga0500556_0000986
371 Ga0500559_0000582
372 Ga0500559_0000882
373 Ga0500559_0001219
374 Ga0500559_0002455
375 Ga0500568_0000012
376 Ga0500568_0000623
377 Ga0500568_0001301
378 Ga0500568_0002170
379 Ga0500568_0004306
380 Ga0500573_0000005
381 Ga0500573_0003546
382 Ga0500573_0005427
383 Ga0500573_0026214
384 Ga0500577_0005777
385 Ga0500616_0000317
386 Ga0500616_0001010
387 Ga0500645_002462
388 Ga0501082_0003651
389 2966927521
390 2587864597
391 2643769040
392 2643876868
393 2644097888
394 2644112503
395 2644182100
396 2644278156
397 2644383923
398 2723643629
399 2753300783
400 2808900465
401 2844843677
402 2844853190
403 2852644153
404 2857733001
405 2857734861
406 2857739045
407 2862993782
408 2870625496
409 2884766848
410 2895663068
411 2904504684
412 2908674888
413 2909075794
414 2919041058
415 2919046062
416 2919055680
417 2919445069
418 2919525776
419 2928106686
420 2928121697
421 2928153819
422 2928501856
423 2935413279
424 2984552852
425 8056038470
426 8057346218

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13520

AA_permease_2

Amino acid permease

31

475

0.79

Map