F325873

General Info

Members Datasets Scaffolds Average Seq Length
214 190 428 716

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2996336353|2996337911
Length 823
Sequence QSSASDIDVDLGRLFGSLVVRWKRILFVALAVTGMALAYAWLATPHYRGETRILIETRESVFTRPQTGSDDRPLLDEEGVTSQVQVITSTDLLKEVARKLDLARLPEFDAAANMSALSRFLVVAGLKSDPNEIPPEERVLKVFREKLNVYRVENSRVIVIEMSAEDPKLAAEIPNALADAYIAVQSAAKLQSNSDATDWLEPEIASLSERVKAAEARVANFRAQSDLLIGQNNSVLATQQLSELSTELSRVRANRGAAEANAASVRAVLQSGASLDSLPEVLSSQLIQRLREREVQLRADIADMSTTLLDNHPRIRAARSQLADLDRQIRAEAENVLKSLGTEANAAKLREQQLVADLNELKAESARAGEEEVELRALEREANAQRELLESYLSRYREASSRRDGNYLPADARIFSRAIVPAEPYYPKPLPIAGAAFIGSLLVMAIVTLLQELFSGRAMRPAAGSRLEAETQDEPLYAEPVVVEEVVHDNPATVEPAVVPEAEAAGISQPAPVEPKPALAEEMELPTVAAPTSPATDILPAPSAIQPVKHEPLPEMKVERESFSEAWARHRSMMDAGRHEAQPVEDNPAEYDEPEDQEVEKEPVMRNPFARRKPAPETSEPVETDMGEVGVESAAEMLIAGGATRAIFVSPEGDEGAAAAVMVAREVADSGLRVLLIDLTASGAASRPMLDSVSFPGVTNLLASEAQFTDAIHTDRYSDCHVMPVGTADPVRAMKAADRLPVIMKSLTTAYDVVVVECGASDAEGIRRLVADGTEIMVSVIEPDGETAAMAAALKARGYGRVMLVSPANHNSPDAPTPGRSAA

Samples

Sample ID Description Type Environment
1 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
2 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
3 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
4 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
6 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
7 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
8 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
9 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
10 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
11 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
12 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
13 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
14 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
15 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
16 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
17 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
18 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
19 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
20 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
21 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
22 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
23 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
25 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
26 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
27 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
29 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
30 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
31 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
32 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
33 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
34 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
35 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
36 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
37 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
38 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
39 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
40 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
41 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
42 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
43 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
44 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
45 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
46 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
47 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
48 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
49 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
50 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
51 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
52 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
53 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
54 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
55 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
56 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
57 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
58 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
59 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
60 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
61 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
65 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
66 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
67 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
69 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
70 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
71 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
72 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
73 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
74 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
75 2996336353 Mesorhizobium sp. YM1C-6-2 Isolate Unclassified
76 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
77 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
78 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
79 2513237305 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
80 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
81 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
82 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
83 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
84 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
85 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
86 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
87 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
88 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
89 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
90 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
91 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
92 2643221550 Mesorhizobium sp. Root552 Isolate Unclassified
93 2643221551 Mesorhizobium sp. Root1471 Isolate Unclassified
94 2643221555 Mesorhizobium sp. Root554 Isolate Unclassified
95 2643221582 Rhizobium sp. Root651 Isolate Unclassified
96 2643221607 Rhizobium sp. Root73 Isolate Unclassified
97 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
98 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
99 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
100 2643221688 Rhizobium sp. Root482 Isolate Unclassified
101 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
102 2643221693 Rhizobium sp. Root491 Isolate Unclassified
103 2643221718 Rhizobium sp. Root268 Isolate Unclassified
104 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
105 2738543024 Aminobacter sp. AP02 Isolate Unclassified
106 2751185800 Brucella pituitosa AA2 Isolate Unclassified
107 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
108 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
109 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
110 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
111 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
112 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
113 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
114 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
115 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
116 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
117 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
118 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
119 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
120 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
121 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
122 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
123 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
124 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
125 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
126 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
127 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
128 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
129 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
130 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
131 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
132 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
133 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
134 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
135 2854911287 Brucella lupini LUP21 Isolate Unclassified
136 2856320880 Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 Isolate Nodule
137 2856349417 Mesorhizobium sp. M4A.F.Ca.ET.090.04.2.1 Isolate Nodule
138 2871488783 Mesorhizobium sp. M4B.F.Ca.ET.203.01.1.1 Isolate Nodule
139 2878753008 Mesorhizobium sp. M4B.F.Ca.ET.150.01.1.1 Isolate Nodule
140 2881155292 Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1 Isolate Nodule
141 2882912400 Mesorhizobium sp. M4B.F.Ca.ET.013.02.1.1 Isolate Nodule
142 2885318864 Mesorhizobium sp. M4B.F.Ca.ET.017.02.2.1 Isolate Nodule
143 2885342637 Mesorhizobium sp. M4A.F.Ca.ET.050.02.1.1 Isolate Nodule
144 2885350715 Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 Isolate Nodule
145 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
146 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
147 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
148 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
149 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
150 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
151 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
152 2904578770 Phyllobacterium sp. 586 Isolate Unclassified
153 2915650412 Ochrobactrum sp. CM-21-5 Isolate Rhizosphere
154 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
155 2919119836 Phyllobacterium sp. 1468 Isolate Rhizosphere
156 2924784321 Mesorhizobium sp. M4B.F.Ca.ET.143.01.1.1 Isolate Nodule
157 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
158 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
159 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
160 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
161 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
162 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
163 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
164 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
165 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
166 2961170736 Mesorhizobium sp. M4B.F.Ca.ET.200.01.1.1 Isolate Nodule
167 2967996073 Mesorhizobium sp. M4B.F.Ca.ET.169.01.1.1 Isolate Nodule
168 2968003550 Mesorhizobium sp. M4B.F.Ca.ET.215.01.1.1 Isolate Nodule
169 2970503327 Mesorhizobium sp. M4B.F.Ca.ET.190.01.1.1 Isolate Nodule
170 2977821940 Mesorhizobium sp. M4B.F.Ca.ET.214.01.1.1 Isolate Nodule
171 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
172 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
173 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
174 2979808191 Mesorhizobium sp. M4B.F.Ca.ET.172.01.1.1 Isolate Nodule
175 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
176 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
177 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
178 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
179 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
180 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
181 2996348954 Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 Isolate Nodule
182 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
183 3004275668 Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 Isolate Nodule
184 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
185 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
186 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
187 8004374579 Mesorhizobium sp. M4B.F.Ca.ET.211.01.1.1 Isolate Nodule
188 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
189 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
190 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 45.79
Metatranscriptomes 0
Isolates 54.21

Biome Distribution

Category Percentage (%)
Aerial Root 1.87
Bulb 0
Endosphere 5.61
Nodule 27.1
Rhizoplane 3.27
Rhizosphere 34.11
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000406 3300003214 Bacteria 45616
2 Ga0070663_100033518 3300005455 Bacteria 3549
3 Ga0070665_100011163 3300005548 Bacteria 9080
4 Ga0070665_100081382 3300005548 Bacteria 3244
5 Ga0081539_10001367 3300005985 Bacteria 42276
6 Ga0075365_10018895 3300006038 Bacteria 4245
7 Ga0075369_10015695 3300006186 Bacteria 3044
8 Ga0079104_1002482 3300006946 Bacteria 9857
9 Ga0099826_10016338 3300006948 Bacteria 5602
10 Ga0105239_10106396 3300010375 Bacteria 3107
11 Ga0157373_10008743 3300013100 Bacteria 7504
12 Ga0157371_10000073 3300013102 Bacteria 163215
13 Ga0157370_10002437 3300013104 Bacteria 22431
14 Ga0214544_1000017 3300021320 Bacteria 193638
15 Ga0214542_1000006 3300021321 Bacteria 345164
16 Ga0214543_1000014 3300021327 Bacteria 324986
17 Ga0228711_1000591 3300022739 Bacteria 46284
18 Ga0228710_1000186 3300022740 Bacteria 61784
19 Ga0209026_1000002 3300025250 Bacteria 1136158
20 Ga0209759_1000156 3300025256 Bacteria 117222
21 Ga0209233_1000342 3300025261 Bacteria 45690
22 Ga0209025_1000195 3300025294 Bacteria 148218
23 Ga0209758_1005831 3300025297 Bacteria 9203
24 Ga0207678_10035322 3300026067 Bacteria 4352
25 Ga0209281_1000478 3300027111 Bacteria 55814
26 Ga0209371_1000021 3300027312 Bacteria 555864
27 Ga0209371_1001181 3300027312 Bacteria 19037
28 Ga0209282_1000022 3300027666 Bacteria 173388
29 Ga0209282_1011714 3300027666 Bacteria 5570
30 Ga0268266_10008377 3300028379 Bacteria 9195
31 Ga0268266_10015517 3300028379 Bacteria 6535
32 Ga0307515_10000070 3300028794 Bacteria 239322
33 Ga0307515_10016675 3300028794 Bacteria 13433
34 Ga0268256_1000020 3300030500 Bacteria 557873
35 Ga0268256_1000698 3300030500 Bacteria 25100
36 Ga0307513_10020222 3300031456 Bacteria 7899
37 Ga0315914_1000027 3300031967 Bacteria 106536
38 Ga0315913_1000201 3300033430 Bacteria 43897
39 Ga0315915_1000001 3300033464 Bacteria 481518
40 Ga0395900_0082865 3300037418 Bacteria 3295
41 Ga0395905_0000480 3300037471 Bacteria 55168
42 Ga0395901_0018306 3300038443 Bacteria 7152
43 Ga0395901_0126197 3300038443 Bacteria 2689
44 Ga0439436_0007935 3300041404 Bacteria 3260
45 Ga0439465_0006691 3300041413 Bacteria 3660
46 Ga0439462_0005346 3300042015 Bacteria 3164
47 Ga0466960_0006260 3300044901 Bacteria 4767
48 Ga0495606_0013152 3300046507 Bacteria 6568
49 Ga0495671_0020588 3300046692 Bacteria 3475
50 Ga0495681_0004711 3300047470 Bacteria 9247
51 Ga0496113_0028551 3300048916 Bacteria 4014
52 Ga0496117_0000002 3300048920 Bacteria 2483758
53 Ga0496117_0025146 3300048920 Bacteria 4688
54 Ga0496118_0000245 3300048921 Bacteria 96235
55 Ga0496118_0016188 3300048921 Bacteria 6854
56 Ga0496119_0008849 3300048922 Bacteria 8755
57 Ga0496119_0022110 3300048922 Bacteria 4567
58 Ga0496120_0000794 3300048923 Bacteria 45599
59 Ga0496120_0001486 3300048923 Bacteria 27853
60 Ga0496121_0000001 3300048924 Bacteria 1830318
61 Ga0496122_0000001 3300048925 Bacteria 1827766
62 Ga0496123_0000001 3300048926 Bacteria 1831497
63 Ga0496123_0019618 3300048926 Bacteria 5325
64 Ga0496125_0000001 3300048928 Bacteria 1766138
65 Ga0496125_0000372 3300048928 Bacteria 84272
66 Ga0496125_0024205 3300048928 Bacteria 5587
67 Ga0496126_0030051 3300048929 Bacteria 5155
68 Ga0496126_0031570 3300048929 Bacteria 5001
69 Ga0496126_0061515 3300048929 Bacteria 3372
70 Ga0501031_0000202 3300049568 Bacteria 33947
71 Ga0501032_0000443 3300049569 Bacteria 33947
72 Ga0501033_0000097 3300049570 Bacteria 83228
73 Ga0501033_0001914 3300049570 Bacteria 18115
74 Ga0501033_0018880 3300049570 Bacteria 5212
75 Ga0501034_0000186 3300049571 Bacteria 116500
76 Ga0501034_0036475 3300049571 Bacteria 4981
77 Ga0501036_0000002 3300049572 Bacteria 293106
78 Ga0501037_0000443 3300049573 Bacteria 33927
79 Ga0501038_0000867 3300049574 Bacteria 26767
80 Ga0501038_0006413 3300049574 Bacteria 10894
81 Ga0501039_0000002 3300049575 Bacteria 375152
82 Ga0501043_0000543 3300049579 Bacteria 33914
83 Ga0501046_0011868 3300049580 Bacteria 7434
84 Ga0501047_0002948 3300049581 Bacteria 16125
85 Ga0501068_0016114 3300049584 Bacteria 4304
86 Ga0501070_0024520 3300049586 Bacteria 5058
87 Ga0501070_0033938 3300049586 Bacteria 4269
88 Ga0501035_0000100 3300049822 Bacteria 107321
89 Ga0501035_0012810 3300049822 Bacteria 7744
90 Ga0501044_0000002 3300049823 Bacteria 375152
91 Ga0501044_0011127 3300049823 Bacteria 9757
92 Ga0501044_0026124 3300049823 Bacteria 6183
93 nmdc:mga00v17_18_c1 3300050491 Bacteria 121281
94 nmdc:mga0yw44_17774_c1 3300050492 Bacteria 3879
95 nmdc:mga0sz30_692_c1 3300050516 Bacteria 12425
96 Ga0500559_0014024 3300053136 Bacteria 3387
97 Ga0500561_0000182 3300053137 Bacteria 11496
98 Ga0500568_0000222 3300053139 Bacteria 48804
99 2996337911 2996336353 Bacteria 5511628
100 2509115327 2508501123 Bacteria 6283661
101 2511388265 2511231027 Bacteria 5013807
102 2514001083 2513237159 Bacteria 6810126
103 2514418769 2513237305 Bacteria 7293571
104 2514589757 2513237351 Bacteria 6968952
105 2537874828 2537561587 Bacteria 5425293
106 2554247345 2554235003 Bacteria 5877155
107 2559294476 2558860242 Bacteria 5568029
108 2561466150 2558860983 Bacteria 4133860
109 2585165675 2582581283 Bacteria 6030556
110 2585269365 2582581306 Bacteria 6450535
111 2585391344 2582581865 Bacteria 6644329
112 2585392911 2582581866 Bacteria 6859583
113 2599602405 2599185210 Bacteria 5624189
114 2601608542 2600255279 Bacteria 5605316
115 2601745316 2600255308 Bacteria 5611129
116 2643772066 2643221550 Bacteria 4619371
117 2643775257 2643221551 Bacteria 3750538
118 2643793703 2643221555 Bacteria 3749717
119 2643918976 2643221582 Bacteria 5804683
120 2644048303 2643221607 Bacteria 6314006
121 2644200800 2643221636 Bacteria 6583769
122 2644206097 2643221637 Bacteria 5345260
123 2644485280 2643221686 Bacteria 6310811
124 2644493293 2643221688 Bacteria 5260751
125 2644502291 2643221689 Bacteria 6042950
126 2644518539 2643221693 Bacteria 5513853
127 2644649744 2643221718 Bacteria 5345506
128 2723576580 2721755686 Bacteria 7343952
129 2739308804 2738543024 Bacteria 5603683
130 2753359090 2751185800 Bacteria 5467370
131 2757571664 2757320392 Bacteria 3737298
132 2758641331 2758568016 Bacteria 5645291
133 2765465356 2765235802 Bacteria 5618596
134 2770197788 2767802442 Bacteria 5747986
135 2776271824 2775506902 Bacteria 6208009
136 2776279661 2775506904 Bacteria 5954060
137 2776912931 2775507049 Bacteria 6284736
138 2808985748 2808606387 Bacteria 5697198
139 2819555870 2818991439 Bacteria 6907412
140 2838676592 2838675328 Bacteria 4909118
141 2838715476 2838714209 Bacteria 5525906
142 2838720724 2838719591 Bacteria 5523910
143 2838726232 2838724970 Bacteria 4908691
144 2839995754 2839993093 Bacteria 5512535
145 2840769837 2840764183 Bacteria 6358399
146 2841847655 2841846520 Bacteria 5345850
147 2841859805 2841859092 Bacteria 5436171
148 2842126315 2842124991 Bacteria 5346824
149 2842131485 2842130223 Bacteria 4909145
150 2842153346 2842152218 Bacteria 4908957
151 2842171719 2842170452 Bacteria 5525737
152 2842176965 2842175837 Bacteria 4908771
153 2842188584 2842187318 Bacteria 5524014
154 2842212895 2842211629 Bacteria 5523832
155 2842225486 2842224351 Bacteria 5524473
156 2842516590 2842515876 Bacteria 5436280
157 2842526227 2842521101 Bacteria 6569494
158 2842874372 2842871566 Bacteria 4827117
159 2854914630 2854911287 Bacteria 5582813
160 2856324719 2856320880 Bacteria 7263508
161 2856352207 2856349417 Bacteria 6230045
162 2871488949 2871488783 Bacteria 6929816
163 2878753711 2878753008 Bacteria 6922523
164 2881156543 2881155292 Bacteria 6461656
165 2882919631 2882912400 Bacteria 6801539
166 2885324179 2885318864 Bacteria 6729568
167 2885348522 2885342637 Bacteria 7011821
168 2885353123 2885350715 Bacteria 6787678
169 2889793961 2889790730 Bacteria 5689708
170 2889915812 2889914905 Bacteria 5702301
171 2894654728 2894652903 Bacteria 4587256
172 2899796853 2899792073 Bacteria 4926588
173 2899803888 2899803654 Bacteria 5577784
174 2899847103 2899845264 Bacteria 5672268
175 2903495608 2903492973 Bacteria 13473544
176 2904581520 2904578770 Bacteria 5302906
177 2915651601 2915650412 Bacteria 4288180
178 2919115568 2919114240 Bacteria 5700270
179 2919122754 2919119836 Bacteria 5208557
180 2924789937 2924784321 Bacteria 7416538
181 2926756619 2926754445 Bacteria 5964435
182 2926760855 2926760298 Bacteria 5505990
183 2928524472 2928521798 Bacteria 4960112
184 2929139638 2929138655 Bacteria 5810547
185 2933007989 2933006813 Bacteria 4912075
186 2933012770 2933011516 Bacteria 5439334
187 2933595261 2933594066 Bacteria 5594265
188 2937845549 2937843397 Bacteria 5256375
189 2954015248 2954011201 Bacteria 4762601
190 2961170899 2961170736 Bacteria 7072258
191 2968003478 2967996073 Bacteria 6787468
192 2968004245 2968003550 Bacteria 6929263
193 2970503489 2970503327 Bacteria 7099517
194 2977822926 2977821940 Bacteria 6906439
195 2979093868 2979089926 Bacteria 5670289
196 2979098749 2979095461 Bacteria 5669583
197 2979105896 2979100975 Bacteria 5423623
198 2979815718 2979808191 Bacteria 7179355
199 2984512315 2984509177 Bacteria 5274802
200 2984521323 2984518228 Bacteria 5277463
201 2984540618 2984537506 Bacteria 5277481
202 2984602884 2984601300 Bacteria 5455244
203 2989772228 2989771324 Bacteria 5605128
204 2996311279 2996310559 Bacteria 6357320
205 2996351556 2996348954 Bacteria 7239054
206 3002143502 3002141150 Bacteria 5254435
207 3004278256 3004275668 Bacteria 7114440
208 650739677 650716007 Bacteria 5573770
209 8002285329 8002285264 Bacteria 6717907
210 8003570726 8003570095 Bacteria 5747666
211 8004375282 8004374579 Bacteria 6898112
212 8005659876 8005658619 Bacteria 4500593
213 8018152449 8018150411 Bacteria 5549903
214 8055434290 8055431914 Bacteria 4551896
215 JGI25165J46597_1000406
216 Ga0070663_100033518
217 Ga0070665_100011163
218 Ga0070665_100081382
219 Ga0081539_10001367
220 Ga0075365_10018895
221 Ga0075369_10015695
222 Ga0079104_1002482
223 Ga0099826_10016338
224 Ga0105239_10106396
225 Ga0157373_10008743
226 Ga0157371_10000073
227 Ga0157370_10002437
228 Ga0214544_1000017
229 Ga0214542_1000006
230 Ga0214543_1000014
231 Ga0228711_1000591
232 Ga0228710_1000186
233 Ga0209026_1000002
234 Ga0209759_1000156
235 Ga0209233_1000342
236 Ga0209025_1000195
237 Ga0209758_1005831
238 Ga0207678_10035322
239 Ga0209281_1000478
240 Ga0209371_1000021
241 Ga0209371_1001181
242 Ga0209282_1000022
243 Ga0209282_1011714
244 Ga0268266_10008377
245 Ga0268266_10015517
246 Ga0307515_10000070
247 Ga0307515_10016675
248 Ga0268256_1000020
249 Ga0268256_1000698
250 Ga0307513_10020222
251 Ga0315914_1000027
252 Ga0315913_1000201
253 Ga0315915_1000001
254 Ga0395900_0082865
255 Ga0395905_0000480
256 Ga0395901_0018306
257 Ga0395901_0126197
258 Ga0439436_0007935
259 Ga0439465_0006691
260 Ga0439462_0005346
261 Ga0466960_0006260
262 Ga0495606_0013152
263 Ga0495671_0020588
264 Ga0495681_0004711
265 Ga0496113_0028551
266 Ga0496117_0000002
267 Ga0496117_0025146
268 Ga0496118_0000245
269 Ga0496118_0016188
270 Ga0496119_0008849
271 Ga0496119_0022110
272 Ga0496120_0000794
273 Ga0496120_0001486
274 Ga0496121_0000001
275 Ga0496122_0000001
276 Ga0496123_0000001
277 Ga0496123_0019618
278 Ga0496125_0000001
279 Ga0496125_0000372
280 Ga0496125_0024205
281 Ga0496126_0030051
282 Ga0496126_0031570
283 Ga0496126_0061515
284 Ga0501031_0000202
285 Ga0501032_0000443
286 Ga0501033_0000097
287 Ga0501033_0001914
288 Ga0501033_0018880
289 Ga0501034_0000186
290 Ga0501034_0036475
291 Ga0501036_0000002
292 Ga0501037_0000443
293 Ga0501038_0000867
294 Ga0501038_0006413
295 Ga0501039_0000002
296 Ga0501043_0000543
297 Ga0501046_0011868
298 Ga0501047_0002948
299 Ga0501068_0016114
300 Ga0501070_0024520
301 Ga0501070_0033938
302 Ga0501035_0000100
303 Ga0501035_0012810
304 Ga0501044_0000002
305 Ga0501044_0011127
306 Ga0501044_0026124
307 nmdc:mga00v17_18_c1
308 nmdc:mga0yw44_17774_c1
309 nmdc:mga0sz30_692_c1
310 Ga0500559_0014024
311 Ga0500561_0000182
312 Ga0500568_0000222
313 2996337911
314 2509115327
315 2511388265
316 2514001083
317 2514418769
318 2514589757
319 2537874828
320 2554247345
321 2559294476
322 2561466150
323 2585165675
324 2585269365
325 2585391344
326 2585392911
327 2599602405
328 2601608542
329 2601745316
330 2643772066
331 2643775257
332 2643793703
333 2643918976
334 2644048303
335 2644200800
336 2644206097
337 2644485280
338 2644493293
339 2644502291
340 2644518539
341 2644649744
342 2723576580
343 2739308804
344 2753359090
345 2757571664
346 2758641331
347 2765465356
348 2770197788
349 2776271824
350 2776279661
351 2776912931
352 2808985748
353 2819555870
354 2838676592
355 2838715476
356 2838720724
357 2838726232
358 2839995754
359 2840769837
360 2841847655
361 2841859805
362 2842126315
363 2842131485
364 2842153346
365 2842171719
366 2842176965
367 2842188584
368 2842212895
369 2842225486
370 2842516590
371 2842526227
372 2842874372
373 2854914630
374 2856324719
375 2856352207
376 2871488949
377 2878753711
378 2881156543
379 2882919631
380 2885324179
381 2885348522
382 2885353123
383 2889793961
384 2889915812
385 2894654728
386 2899796853
387 2899803888
388 2899847103
389 2903495608
390 2904581520
391 2915651601
392 2919115568
393 2919122754
394 2924789937
395 2926756619
396 2926760855
397 2928524472
398 2929139638
399 2933007989
400 2933012770
401 2933595261
402 2937845549
403 2954015248
404 2961170899
405 2968003478
406 2968004245
407 2970503489
408 2977822926
409 2979093868
410 2979098749
411 2979105896
412 2979815718
413 2984512315
414 2984521323
415 2984540618
416 2984602884
417 2989772228
418 2996311279
419 2996351556
420 3002143502
421 3004278256
422 650739677
423 8002285329
424 8003570726
425 8004375282
426 8005659876
427 8018152449
428 8055434290

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02706

Wzz

Chain length determinant protein

7

100

0.86

Map