F325965
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 215 | 132 | 214 | 148 |
Family's Representative Sequence
| Representative Sequence | 3300004625|Ga0055543_1018485|Ga0055543_10184852 |
| Length | 156 |
| Sequence | MTDHSLHATDHKPRLFPDDASVRHIGEGLLACALPREAWTHEAHLAACLWLLFERPDIDIDAEIAGIISRFNESVGGVNDDHGGYHDSITRVYVAGVRDFLRGAEGGLAERVNALLLSPVGRRDYPLRFYSPERLFSVAARRAFVAPDLAALPGNC |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2830075706 | Sphingomonas jinjuensis DSM 21457 | Isolate | Rhizosphere |
| 2 | 3300001915 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 | Metagenome | Rhizosphere |
| 3 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 4 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 5 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 6 | 3300001991 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 | Metagenome | Rhizosphere |
| 7 | 3300002075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 | Metagenome | Rhizosphere |
| 8 | 3300004625 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 | Metagenome | Endosphere |
| 9 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 10 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 16 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 17 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 27 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 31 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 32 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 34 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 35 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 36 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 37 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 38 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 39 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 40 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 41 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 42 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 43 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 45 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 87 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 88 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 89 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 90 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 91 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 92 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 93 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 94 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 95 | 3300035089 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 | Metagenome | Rhizosphere |
| 96 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 97 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 98 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 99 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 100 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 101 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 102 | 3300038705 | Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 | Metagenome | Unclassified |
| 103 | 3300039145 | Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 | Metagenome | Unclassified |
| 104 | 3300042156 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 | Metagenome | Rhizosphere |
| 105 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 106 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 107 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 108 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 109 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 110 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 111 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 112 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 113 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 114 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 115 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 116 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 123 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 124 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 125 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 126 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 127 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 128 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 129 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 130 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 131 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 132 | 3300053158 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 99.53 |
| Metatranscriptomes | 0 |
| Isolates | 0.47 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.19 |
| Nodule | 0 |
| Rhizoplane | 0.47 |
| Rhizosphere | 93.02 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.33 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24741J21665_1025344 | 3300001915 | Bacteria | 907 |
| 2 | JGI24740J21852_10008907 | 3300001979 | Bacteria | 3967 |
| 3 | JGI24739J22299_10003537 | 3300001989 | Bacteria | 5965 |
| 4 | JGI24737J22298_10008437 | 3300001990 | Bacteria | 3447 |
| 5 | JGI24743J22301_10005382 | 3300001991 | Bacteria | 2134 |
| 6 | JGI24743J22301_10006588 | 3300001991 | Bacteria | 1985 |
| 7 | JGI24738J21930_10010298 | 3300002075 | Bacteria | 2082 |
| 8 | JGI24738J21930_10126595 | 3300002075 | Bacteria | 557 |
| 9 | Ga0055543_1018485 | 3300004625 | Bacteria | 1300 |
| 10 | Ga0065165_1002598 | 3300005262 | Bacteria | 14805 |
| 11 | Ga0070658_10218675 | 3300005327 | Bacteria | 1610 |
| 12 | Ga0070658_10449888 | 3300005327 | Bacteria | 1110 |
| 13 | Ga0070676_10195461 | 3300005328 | Bacteria | 1323 |
| 14 | Ga0070683_100022268 | 3300005329 | Bacteria | 5661 |
| 15 | Ga0070683_100071276 | 3300005329 | Bacteria | 3242 |
| 16 | Ga0070670_100008579 | 3300005331 | Bacteria | 8717 |
| 17 | Ga0070666_10023181 | 3300005335 | Bacteria | 4038 |
| 18 | Ga0070666_10139632 | 3300005335 | Bacteria | 1687 |
| 19 | Ga0070680_100842293 | 3300005336 | Bacteria | 790 |
| 20 | Ga0070680_101146790 | 3300005336 | Bacteria | 672 |
| 21 | Ga0070680_101905008 | 3300005336 | Unclassified | 515 |
| 22 | Ga0070682_100380993 | 3300005337 | Bacteria | 1061 |
| 23 | Ga0070682_100526313 | 3300005337 | Bacteria | 921 |
| 24 | Ga0070660_100022815 | 3300005339 | Bacteria | 4634 |
| 25 | Ga0070660_100094295 | 3300005339 | Bacteria | 2365 |
| 26 | Ga0070660_100113404 | 3300005339 | Bacteria | 2159 |
| 27 | Ga0070660_100976214 | 3300005339 | Bacteria | 715 |
| 28 | Ga0070661_100032694 | 3300005344 | Bacteria | 3766 |
| 29 | Ga0070668_100029127 | 3300005347 | Bacteria | 4193 |
| 30 | Ga0070675_100089458 | 3300005354 | Bacteria | 2578 |
| 31 | Ga0070671_100041520 | 3300005355 | Bacteria | 3823 |
| 32 | Ga0070671_101000513 | 3300005355 | Unclassified | 732 |
| 33 | Ga0070671_102005975 | 3300005355 | Unclassified | 515 |
| 34 | Ga0070674_100130015 | 3300005356 | Bacteria | 1876 |
| 35 | Ga0070674_100379306 | 3300005356 | Bacteria | 1150 |
| 36 | Ga0070673_100021743 | 3300005364 | Bacteria | 4658 |
| 37 | Ga0070659_100025760 | 3300005366 | Bacteria | 4523 |
| 38 | Ga0070659_100033312 | 3300005366 | Bacteria | 4001 |
| 39 | Ga0070659_100440037 | 3300005366 | Bacteria | 1104 |
| 40 | Ga0070667_100017139 | 3300005367 | Bacteria | 5999 |
| 41 | Ga0070667_100073689 | 3300005367 | Bacteria | 2911 |
| 42 | Ga0070667_100629613 | 3300005367 | Bacteria | 990 |
| 43 | Ga0070709_10106575 | 3300005434 | Bacteria | 1876 |
| 44 | Ga0070663_100120097 | 3300005455 | Bacteria | 1984 |
| 45 | Ga0070663_100158187 | 3300005455 | Bacteria | 1742 |
| 46 | Ga0070678_100260837 | 3300005456 | Bacteria | 1457 |
| 47 | Ga0070662_100056418 | 3300005457 | Bacteria | 2852 |
| 48 | Ga0070662_100327401 | 3300005457 | Bacteria | 1251 |
| 49 | Ga0068867_101506144 | 3300005459 | Bacteria | 626 |
| 50 | Ga0068853_100114799 | 3300005539 | Bacteria | 2396 |
| 51 | Ga0070665_100141551 | 3300005548 | Bacteria | 2408 |
| 52 | Ga0070665_101687343 | 3300005548 | Bacteria | 641 |
| 53 | Ga0068855_100331842 | 3300005563 | Bacteria | 1679 |
| 54 | Ga0068855_101183612 | 3300005563 | Bacteria | 795 |
| 55 | Ga0070664_100061237 | 3300005564 | Bacteria | 3207 |
| 56 | Ga0070664_100364424 | 3300005564 | Bacteria | 1317 |
| 57 | Ga0070664_100367718 | 3300005564 | Bacteria | 1310 |
| 58 | Ga0068857_100061759 | 3300005577 | Bacteria | 3329 |
| 59 | Ga0068854_100232631 | 3300005578 | Bacteria | 1463 |
| 60 | Ga0068852_100106502 | 3300005616 | Bacteria | 2542 |
| 61 | Ga0068852_100519904 | 3300005616 | Bacteria | 1187 |
| 62 | Ga0068851_10268733 | 3300005834 | Bacteria | 972 |
| 63 | Ga0068863_100732433 | 3300005841 | Bacteria | 984 |
| 64 | Ga0068860_102022469 | 3300005843 | Bacteria | 598 |
| 65 | Ga0068862_100054566 | 3300005844 | Bacteria | 3421 |
| 66 | Ga0070717_10622765 | 3300006028 | Bacteria | 979 |
| 67 | Ga0097621_100310045 | 3300006237 | Bacteria | 1396 |
| 68 | Ga0068865_101488829 | 3300006881 | Bacteria | 606 |
| 69 | Ga0105244_10511931 | 3300009036 | Bacteria | 553 |
| 70 | Ga0105246_10826746 | 3300011119 | Unclassified | 824 |
| 71 | Ga0105246_11940338 | 3300011119 | Bacteria | 566 |
| 72 | Ga0157371_10135445 | 3300013102 | Bacteria | 1754 |
| 73 | Ga0157378_11816891 | 3300013297 | Bacteria | 658 |
| 74 | Ga0157372_10647136 | 3300013307 | Bacteria | 1231 |
| 75 | Ga0157375_10678326 | 3300013308 | Bacteria | 1185 |
| 76 | Ga0207656_10450829 | 3300025321 | Bacteria | 650 |
| 77 | Ga0207688_10007815 | 3300025901 | Bacteria | 5819 |
| 78 | Ga0207680_10277254 | 3300025903 | Bacteria | 1164 |
| 79 | Ga0207647_10115886 | 3300025904 | Bacteria | 1582 |
| 80 | Ga0207647_10157596 | 3300025904 | Bacteria | 1325 |
| 81 | Ga0207645_10044581 | 3300025907 | Bacteria | 2838 |
| 82 | Ga0207645_10259499 | 3300025907 | Bacteria | 1151 |
| 83 | Ga0207705_10153727 | 3300025909 | Bacteria | 1725 |
| 84 | Ga0207662_10213822 | 3300025918 | Bacteria | 1253 |
| 85 | Ga0207657_10028283 | 3300025919 | Bacteria | 5116 |
| 86 | Ga0207657_10059759 | 3300025919 | Bacteria | 3273 |
| 87 | Ga0207657_10189715 | 3300025919 | Bacteria | 1659 |
| 88 | Ga0207657_10375540 | 3300025919 | Bacteria | 1120 |
| 89 | Ga0207657_10791325 | 3300025919 | Unclassified | 733 |
| 90 | Ga0207681_10228633 | 3300025923 | Bacteria | 1443 |
| 91 | Ga0207681_10824896 | 3300025923 | Bacteria | 775 |
| 92 | Ga0207650_10057305 | 3300025925 | Bacteria | 2897 |
| 93 | Ga0207659_10198292 | 3300025926 | Bacteria | 1601 |
| 94 | Ga0207659_11492519 | 3300025926 | Unclassified | 578 |
| 95 | Ga0207700_10152198 | 3300025928 | Bacteria | 1913 |
| 96 | Ga0207664_10038199 | 3300025929 | Bacteria | 3722 |
| 97 | Ga0207664_10397602 | 3300025929 | Bacteria | 1225 |
| 98 | Ga0207664_10418868 | 3300025929 | Bacteria | 1193 |
| 99 | Ga0207644_10542224 | 3300025931 | Bacteria | 962 |
| 100 | Ga0207644_10946065 | 3300025931 | Bacteria | 722 |
| 101 | Ga0207644_10956361 | 3300025931 | Unclassified | 718 |
| 102 | Ga0207690_10018679 | 3300025932 | Bacteria | 4254 |
| 103 | Ga0207690_10116148 | 3300025932 | Bacteria | 1935 |
| 104 | Ga0207690_10535658 | 3300025932 | Bacteria | 950 |
| 105 | Ga0207706_10007703 | 3300025933 | Bacteria | 9943 |
| 106 | Ga0207706_10362276 | 3300025933 | Bacteria | 1260 |
| 107 | Ga0207669_10163841 | 3300025937 | Bacteria | 1574 |
| 108 | Ga0207669_11179041 | 3300025937 | Bacteria | 648 |
| 109 | Ga0207704_11134563 | 3300025938 | Bacteria | 665 |
| 110 | Ga0207691_10031383 | 3300025940 | Bacteria | 4959 |
| 111 | Ga0207679_10015487 | 3300025945 | Bacteria | 5041 |
| 112 | Ga0207679_10052291 | 3300025945 | Bacteria | 2995 |
| 113 | Ga0207679_10299127 | 3300025945 | Bacteria | 1386 |
| 114 | Ga0207651_10475248 | 3300025960 | Bacteria | 1076 |
| 115 | Ga0207668_11564965 | 3300025972 | Bacteria | 595 |
| 116 | Ga0207640_10008015 | 3300025981 | Bacteria | 5837 |
| 117 | Ga0207658_10014684 | 3300025986 | Bacteria | 5366 |
| 118 | Ga0207658_10065107 | 3300025986 | Bacteria | 2736 |
| 119 | Ga0207677_10296641 | 3300026023 | Bacteria | 1334 |
| 120 | Ga0207677_11423483 | 3300026023 | Bacteria | 639 |
| 121 | Ga0207639_10097567 | 3300026041 | Bacteria | 2367 |
| 122 | Ga0207678_10000587 | 3300026067 | Bacteria | 33282 |
| 123 | Ga0207678_10084232 | 3300026067 | Bacteria | 2719 |
| 124 | Ga0207678_10747968 | 3300026067 | Bacteria | 862 |
| 125 | Ga0207702_10041239 | 3300026078 | Bacteria | 3870 |
| 126 | Ga0207648_10020584 | 3300026089 | Bacteria | 5939 |
| 127 | Ga0207674_10008156 | 3300026116 | Bacteria | 12145 |
| 128 | Ga0207683_10003073 | 3300026121 | Bacteria | 14588 |
| 129 | Ga0207698_10135650 | 3300026142 | Bacteria | 2111 |
| 130 | Ga0207698_10247898 | 3300026142 | Bacteria | 1628 |
| 131 | Ga0268266_10239644 | 3300028379 | Bacteria | 1673 |
| 132 | Ga0268265_10318539 | 3300028380 | Bacteria | 1407 |
| 133 | Ga0268264_11117044 | 3300028381 | Bacteria | 797 |
| 134 | Ga0307408_100153493 | 3300031548 | Bacteria | 1820 |
| 135 | Ga0307408_100935704 | 3300031548 | Unclassified | 795 |
| 136 | Ga0307405_10035848 | 3300031731 | Bacteria | 2967 |
| 137 | Ga0307405_10162104 | 3300031731 | Bacteria | 1585 |
| 138 | Ga0307405_10360516 | 3300031731 | Bacteria | 1125 |
| 139 | Ga0307413_10088221 | 3300031824 | Bacteria | 2011 |
| 140 | Ga0307413_10177328 | 3300031824 | Bacteria | 1515 |
| 141 | Ga0307413_10268352 | 3300031824 | Bacteria | 1276 |
| 142 | Ga0307410_10017591 | 3300031852 | Bacteria | 4299 |
| 143 | Ga0307410_10629064 | 3300031852 | Bacteria | 898 |
| 144 | Ga0307406_10043465 | 3300031901 | Bacteria | 2810 |
| 145 | Ga0307406_10077798 | 3300031901 | Bacteria | 2196 |
| 146 | Ga0307406_10129901 | 3300031901 | Bacteria | 1767 |
| 147 | Ga0307406_11264820 | 3300031901 | Bacteria | 643 |
| 148 | Ga0307412_11111513 | 3300031911 | Bacteria | 704 |
| 149 | Ga0307416_100501386 | 3300032002 | Bacteria | 1278 |
| 150 | Ga0307416_100576645 | 3300032002 | Bacteria | 1202 |
| 151 | Ga0307411_10017646 | 3300032005 | Bacteria | 4074 |
| 152 | Ga0307411_10397532 | 3300032005 | Bacteria | 1138 |
| 153 | Ga0307411_11007506 | 3300032005 | Bacteria | 746 |
| 154 | Ga0307415_102162423 | 3300032126 | Unclassified | 544 |
| 155 | Ga0373944_0197762 | 3300035089 | Bacteria | 727 |
| 156 | Ga0373935_0027403 | 3300035692 | Bacteria | 3521 |
| 157 | Ga0395899_0023532 | 3300037312 | Bacteria | 4664 |
| 158 | Ga0395899_0140709 | 3300037312 | Bacteria | 1717 |
| 159 | Ga0395900_0001365 | 3300037418 | Bacteria | 29397 |
| 160 | Ga0395900_0020186 | 3300037418 | Bacteria | 6798 |
| 161 | Ga0395900_0197114 | 3300037418 | Bacteria | 2039 |
| 162 | Ga0395900_0442166 | 3300037418 | Bacteria | 1258 |
| 163 | Ga0395900_0701702 | 3300037418 | Bacteria | 945 |
| 164 | Ga0395900_0993517 | 3300037418 | Bacteria | 759 |
| 165 | Ga0395898_0427112 | 3300037466 | Bacteria | 1263 |
| 166 | Ga0395905_0003299 | 3300037471 | Bacteria | 17323 |
| 167 | Ga0395905_0031796 | 3300037471 | Bacteria | 4966 |
| 168 | Ga0395905_0031976 | 3300037471 | Bacteria | 4950 |
| 169 | Ga0395905_0070198 | 3300037471 | Bacteria | 3282 |
| 170 | Ga0395905_0582424 | 3300037471 | Bacteria | 1020 |
| 171 | Ga0395905_1024822 | 3300037471 | Unclassified | 728 |
| 172 | Ga0395901_0000934 | 3300038443 | Bacteria | 31772 |
| 173 | Ga0395901_0062262 | 3300038443 | Bacteria | 3883 |
| 174 | Ga0395901_0125783 | 3300038443 | Bacteria | 2694 |
| 175 | Ga0395901_0167026 | 3300038443 | Bacteria | 2310 |
| 176 | Ga0395901_0221152 | 3300038443 | Bacteria | 1979 |
| 177 | Ga0395901_0428935 | 3300038443 | Bacteria | 1355 |
| 178 | Ga0237819_01142 | 3300038705 | Bacteria | 7652 |
| 179 | Ga0237816_00355 | 3300039145 | Bacteria | 3853 |
| 180 | Ga0439446_0017947 | 3300042156 | Bacteria | 1979 |
| 181 | Ga0466969_0001948 | 3300044656 | Bacteria | 11040 |
| 182 | Ga0466972_0310339 | 3300044658 | Bacteria | 737 |
| 183 | Ga0466965_0307401 | 3300044683 | Bacteria | 861 |
| 184 | Ga0466966_0117089 | 3300044684 | Bacteria | 1639 |
| 185 | Ga0466966_0146299 | 3300044684 | Bacteria | 1442 |
| 186 | Ga0466961_0038378 | 3300044693 | Bacteria | 3072 |
| 187 | Ga0466961_0054993 | 3300044693 | Bacteria | 2538 |
| 188 | Ga0466963_0056850 | 3300044694 | Bacteria | 2604 |
| 189 | Ga0466971_0100714 | 3300044719 | Bacteria | 1327 |
| 190 | Ga0466970_0043532 | 3300044765 | Bacteria | 2389 |
| 191 | Ga0466957_0012718 | 3300044842 | Bacteria | 4877 |
| 192 | Ga0466957_0025876 | 3300044842 | Bacteria | 3479 |
| 193 | Ga0466959_0047226 | 3300045049 | Bacteria | 3167 |
| 194 | Ga0466959_0047802 | 3300045049 | Bacteria | 3146 |
| 195 | Ga0466959_0061666 | 3300045049 | Bacteria | 2726 |
| 196 | Ga0466958_0035242 | 3300045836 | Bacteria | 2989 |
| 197 | Ga0495650_0060221 | 3300046471 | Bacteria | 1525 |
| 198 | Ga0495584_0685824 | 3300046491 | Bacteria | 522 |
| 199 | Ga0495654_0239557 | 3300046530 | Bacteria | 760 |
| 200 | Ga0495621_0000049 | 3300046539 | Bacteria | 23603 |
| 201 | Ga0495669_0035468 | 3300046684 | Bacteria | 2202 |
| 202 | Ga0495670_0000265 | 3300046691 | Bacteria | 24414 |
| 203 | Ga0496103_0476217 | 3300048906 | Bacteria | 800 |
| 204 | Ga0496119_0346789 | 3300048922 | Bacteria | 720 |
| 205 | Ga0496125_0279383 | 3300048928 | Unclassified | 1035 |
| 206 | Ga0496126_0135496 | 3300048929 | Bacteria | 2125 |
| 207 | nmdc:mga08y16_1217362_c1 | 3300050511 | Bacteria | 723 |
| 208 | Ga0500643_012732 | 3300053087 | Bacteria | 3001 |
| 209 | Ga0500643_014036 | 3300053087 | Bacteria | 2801 |
| 210 | Ga0500562_017501 | 3300053108 | Bacteria | 1849 |
| 211 | Ga0500595_048609 | 3300053119 | Bacteria | 1325 |
| 212 | Ga0500658_0000887 | 3300053134 | Bacteria | 12284 |
| 213 | Ga0500559_0080775 | 3300053136 | Bacteria | 1477 |
| 214 | Ga0500627_0000126 | 3300053158 | Bacteria | 23656 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005563 | Ga0068855_101183612 | Ga0068855_1011836121 | 130 |
| 2 | 3300026067 | Ga0207678_10084232 | Ga0207678_100842323 | 130 |
| 3 | 3300026078 | Ga0207702_10041239 | Ga0207702_100412392 | 130 |
| 4 | 3300037418 | Ga0395900_0020186 | Ga0395900_0020186_5854_6300 | 134 |
| 5 | 3300037466 | Ga0395898_0427112 | Ga0395898_0427112_58_504 | 134 |
| 6 | 3300038443 | Ga0395901_0000934 | Ga0395901_0000934_13455_13901 | 134 |
| 7 | 3300048929 | Ga0496126_0135496 | Ga0496126_0135496_503_940 | 144 |
| 8 | 3300005336 | Ga0070680_101146790 | Ga0070680_1011467901 | 145 |
| 9 | 3300005354 | Ga0070675_100089458 | Ga0070675_1000894582 | 145 |
| 10 | 3300025926 | Ga0207659_10198292 | Ga0207659_101982923 | 145 |
| 11 | 3300050511 | nmdc:mga08y16_1217362_c1 | nmdc:mga08y16_1217362_c1_10_471 | 145 |
| 12 | 3300053087 | Ga0500643_012732 | Ga0500643_012732_157_594 | 145 |
| 13 | 3300053087 | Ga0500643_014036 | Ga0500643_014036_1938_2378 | 145 |
| 14 | iso_pu_bacteria | 2830075706 | 2830077707 | 145 |
| 15 | 3300004625 | Ga0055543_1018485 | Ga0055543_10184852 | 146 |
| 16 | 3300005262 | Ga0065165_1002598 | Ga0065165_10025981 | 146 |
| 17 | 3300046471 | Ga0495650_0060221 | Ga0495650_0060221_142_582 | 146 |
| 18 | 3300031824 | Ga0307413_10088221 | Ga0307413_100882212 | 147 |
| 19 | 3300031901 | Ga0307406_11264820 | Ga0307406_112648202 | 147 |
| 20 | 3300032126 | Ga0307415_102162423 | Ga0307415_1021624231 | 147 |
| 21 | 3300037471 | Ga0395905_1024822 | Ga0395905_1024822_267_713 | 147 |
| 22 | 3300042156 | Ga0439446_0017947 | Ga0439446_0017947_674_1126 | 147 |
| 23 | 3300046530 | Ga0495654_0239557 | Ga0495654_0239557_191_640 | 147 |
| 24 | 3300048922 | Ga0496119_0346789 | Ga0496119_0346789_232_702 | 147 |
| 25 | 3300048928 | Ga0496125_0279383 | Ga0496125_0279383_450_905 | 147 |
| 26 | 3300053108 | Ga0500562_017501 | Ga0500562_017501_1063_1509 | 147 |
| 27 | 3300053134 | Ga0500658_0000887 | Ga0500658_0000887_10045_10497 | 147 |
| 28 | 3300053136 | Ga0500559_0080775 | Ga0500559_0080775_595_1062 | 147 |
| 29 | 3300053158 | Ga0500627_0000126 | Ga0500627_0000126_21622_22071 | 147 |
| 30 | 3300001915 | JGI24741J21665_1025344 | JGI24741J21665_10253442 | 148 |
| 31 | 3300001979 | JGI24740J21852_10008907 | JGI24740J21852_100089072 | 148 |
| 32 | 3300001989 | JGI24739J22299_10003537 | JGI24739J22299_100035376 | 148 |
| 33 | 3300001990 | JGI24737J22298_10008437 | JGI24737J22298_100084374 | 148 |
| 34 | 3300001991 | JGI24743J22301_10005382 | JGI24743J22301_100053822 | 148 |
| 35 | 3300001991 | JGI24743J22301_10006588 | JGI24743J22301_100065882 | 148 |
| 36 | 3300002075 | JGI24738J21930_10010298 | JGI24738J21930_100102982 | 148 |
| 37 | 3300002075 | JGI24738J21930_10126595 | JGI24738J21930_101265951 | 148 |
| 38 | 3300005327 | Ga0070658_10218675 | Ga0070658_102186752 | 148 |
| 39 | 3300005327 | Ga0070658_10449888 | Ga0070658_104498882 | 148 |
| 40 | 3300005328 | Ga0070676_10195461 | Ga0070676_101954612 | 148 |
| 41 | 3300005329 | Ga0070683_100022268 | Ga0070683_1000222685 | 148 |
| 42 | 3300005329 | Ga0070683_100071276 | Ga0070683_1000712764 | 148 |
| 43 | 3300005331 | Ga0070670_100008579 | Ga0070670_10000857910 | 148 |
| 44 | 3300005335 | Ga0070666_10023181 | Ga0070666_100231812 | 148 |
| 45 | 3300005335 | Ga0070666_10139632 | Ga0070666_101396322 | 148 |
| 46 | 3300005336 | Ga0070680_100842293 | Ga0070680_1008422931 | 148 |
| 47 | 3300005336 | Ga0070680_101905008 | Ga0070680_1019050081 | 148 |
| 48 | 3300005337 | Ga0070682_100380993 | Ga0070682_1003809932 | 148 |
| 49 | 3300005337 | Ga0070682_100526313 | Ga0070682_1005263132 | 148 |
| 50 | 3300005339 | Ga0070660_100022815 | Ga0070660_1000228156 | 148 |
| 51 | 3300005339 | Ga0070660_100094295 | Ga0070660_1000942952 | 148 |
| 52 | 3300005339 | Ga0070660_100113404 | Ga0070660_1001134042 | 148 |
| 53 | 3300005339 | Ga0070660_100976214 | Ga0070660_1009762141 | 148 |
| 54 | 3300005344 | Ga0070661_100032694 | Ga0070661_1000326945 | 148 |
| 55 | 3300005347 | Ga0070668_100029127 | Ga0070668_1000291271 | 148 |
| 56 | 3300005355 | Ga0070671_100041520 | Ga0070671_1000415204 | 148 |
| 57 | 3300005355 | Ga0070671_101000513 | Ga0070671_1010005131 | 148 |
| 58 | 3300005355 | Ga0070671_102005975 | Ga0070671_1020059751 | 148 |
| 59 | 3300005356 | Ga0070674_100130015 | Ga0070674_1001300152 | 148 |
| 60 | 3300005356 | Ga0070674_100379306 | Ga0070674_1003793062 | 148 |
| 61 | 3300005364 | Ga0070673_100021743 | Ga0070673_1000217432 | 148 |
| 62 | 3300005366 | Ga0070659_100025760 | Ga0070659_1000257602 | 148 |
| 63 | 3300005366 | Ga0070659_100033312 | Ga0070659_1000333123 | 148 |
| 64 | 3300005366 | Ga0070659_100440037 | Ga0070659_1004400372 | 148 |
| 65 | 3300005367 | Ga0070667_100017139 | Ga0070667_1000171391 | 148 |
| 66 | 3300005367 | Ga0070667_100073689 | Ga0070667_1000736893 | 148 |
| 67 | 3300005367 | Ga0070667_100629613 | Ga0070667_1006296132 | 148 |
| 68 | 3300005434 | Ga0070709_10106575 | Ga0070709_101065752 | 148 |
| 69 | 3300005455 | Ga0070663_100120097 | Ga0070663_1001200972 | 148 |
| 70 | 3300005455 | Ga0070663_100158187 | Ga0070663_1001581872 | 148 |
| 71 | 3300005456 | Ga0070678_100260837 | Ga0070678_1002608373 | 148 |
| 72 | 3300005457 | Ga0070662_100056418 | Ga0070662_1000564182 | 148 |
| 73 | 3300005457 | Ga0070662_100327401 | Ga0070662_1003274012 | 148 |
| 74 | 3300005459 | Ga0068867_101506144 | Ga0068867_1015061441 | 148 |
| 75 | 3300005539 | Ga0068853_100114799 | Ga0068853_1001147992 | 148 |
| 76 | 3300005548 | Ga0070665_100141551 | Ga0070665_1001415512 | 148 |
| 77 | 3300005548 | Ga0070665_101687343 | Ga0070665_1016873432 | 148 |
| 78 | 3300005563 | Ga0068855_100331842 | Ga0068855_1003318422 | 148 |
| 79 | 3300005564 | Ga0070664_100061237 | Ga0070664_1000612372 | 148 |
| 80 | 3300005564 | Ga0070664_100364424 | Ga0070664_1003644242 | 148 |
| 81 | 3300005564 | Ga0070664_100367718 | Ga0070664_1003677182 | 148 |
| 82 | 3300005577 | Ga0068857_100061759 | Ga0068857_1000617592 | 148 |
| 83 | 3300005578 | Ga0068854_100232631 | Ga0068854_1002326312 | 148 |
| 84 | 3300005616 | Ga0068852_100106502 | Ga0068852_1001065022 | 148 |
| 85 | 3300005616 | Ga0068852_100519904 | Ga0068852_1005199042 | 148 |
| 86 | 3300005834 | Ga0068851_10268733 | Ga0068851_102687332 | 148 |
| 87 | 3300005841 | Ga0068863_100732433 | Ga0068863_1007324332 | 148 |
| 88 | 3300005843 | Ga0068860_102022469 | Ga0068860_1020224691 | 148 |
| 89 | 3300005844 | Ga0068862_100054566 | Ga0068862_1000545664 | 148 |
| 90 | 3300006028 | Ga0070717_10622765 | Ga0070717_106227652 | 148 |
| 91 | 3300006237 | Ga0097621_100310045 | Ga0097621_1003100452 | 148 |
| 92 | 3300006881 | Ga0068865_101488829 | Ga0068865_1014888291 | 148 |
| 93 | 3300009036 | Ga0105244_10511931 | Ga0105244_105119312 | 148 |
| 94 | 3300011119 | Ga0105246_10826746 | Ga0105246_108267462 | 148 |
| 95 | 3300011119 | Ga0105246_11940338 | Ga0105246_119403382 | 148 |
| 96 | 3300013102 | Ga0157371_10135445 | Ga0157371_101354452 | 148 |
| 97 | 3300013297 | Ga0157378_11816891 | Ga0157378_118168911 | 148 |
| 98 | 3300013307 | Ga0157372_10647136 | Ga0157372_106471362 | 148 |
| 99 | 3300013308 | Ga0157375_10678326 | Ga0157375_106783262 | 148 |
| 100 | 3300025321 | Ga0207656_10450829 | Ga0207656_104508292 | 148 |
| 101 | 3300025901 | Ga0207688_10007815 | Ga0207688_100078151 | 148 |
| 102 | 3300025903 | Ga0207680_10277254 | Ga0207680_102772542 | 148 |
| 103 | 3300025904 | Ga0207647_10115886 | Ga0207647_101158862 | 148 |
| 104 | 3300025904 | Ga0207647_10157596 | Ga0207647_101575962 | 148 |
| 105 | 3300025907 | Ga0207645_10044581 | Ga0207645_100445812 | 148 |
| 106 | 3300025907 | Ga0207645_10259499 | Ga0207645_102594992 | 148 |
| 107 | 3300025909 | Ga0207705_10153727 | Ga0207705_101537272 | 148 |
| 108 | 3300025918 | Ga0207662_10213822 | Ga0207662_102138222 | 148 |
| 109 | 3300025919 | Ga0207657_10028283 | Ga0207657_100282836 | 148 |
| 110 | 3300025919 | Ga0207657_10059759 | Ga0207657_100597593 | 148 |
| 111 | 3300025919 | Ga0207657_10189715 | Ga0207657_101897152 | 148 |
| 112 | 3300025919 | Ga0207657_10375540 | Ga0207657_103755401 | 148 |
| 113 | 3300025919 | Ga0207657_10791325 | Ga0207657_107913251 | 148 |
| 114 | 3300025923 | Ga0207681_10228633 | Ga0207681_102286332 | 148 |
| 115 | 3300025923 | Ga0207681_10824896 | Ga0207681_108248962 | 148 |
| 116 | 3300025925 | Ga0207650_10057305 | Ga0207650_100573053 | 148 |
| 117 | 3300025926 | Ga0207659_11492519 | Ga0207659_114925191 | 148 |
| 118 | 3300025928 | Ga0207700_10152198 | Ga0207700_101521982 | 148 |
| 119 | 3300025929 | Ga0207664_10038199 | Ga0207664_100381992 | 148 |
| 120 | 3300025929 | Ga0207664_10397602 | Ga0207664_103976022 | 148 |
| 121 | 3300025929 | Ga0207664_10418868 | Ga0207664_104188682 | 148 |
| 122 | 3300025931 | Ga0207644_10542224 | Ga0207644_105422242 | 148 |
| 123 | 3300025931 | Ga0207644_10946065 | Ga0207644_109460652 | 148 |
| 124 | 3300025931 | Ga0207644_10956361 | Ga0207644_109563612 | 148 |
| 125 | 3300025932 | Ga0207690_10018679 | Ga0207690_100186792 | 148 |
| 126 | 3300025932 | Ga0207690_10116148 | Ga0207690_101161482 | 148 |
| 127 | 3300025932 | Ga0207690_10535658 | Ga0207690_105356582 | 148 |
| 128 | 3300025933 | Ga0207706_10007703 | Ga0207706_1000770311 | 148 |
| 129 | 3300025933 | Ga0207706_10362276 | Ga0207706_103622762 | 148 |
| 130 | 3300025937 | Ga0207669_10163841 | Ga0207669_101638412 | 148 |
| 131 | 3300025937 | Ga0207669_11179041 | Ga0207669_111790412 | 148 |
| 132 | 3300025938 | Ga0207704_11134563 | Ga0207704_111345631 | 148 |
| 133 | 3300025940 | Ga0207691_10031383 | Ga0207691_100313832 | 148 |
| 134 | 3300025945 | Ga0207679_10015487 | Ga0207679_100154872 | 148 |
| 135 | 3300025945 | Ga0207679_10052291 | Ga0207679_100522913 | 148 |
| 136 | 3300025945 | Ga0207679_10299127 | Ga0207679_102991272 | 148 |
| 137 | 3300025960 | Ga0207651_10475248 | Ga0207651_104752481 | 148 |
| 138 | 3300025972 | Ga0207668_11564965 | Ga0207668_115649652 | 148 |
| 139 | 3300025981 | Ga0207640_10008015 | Ga0207640_100080154 | 148 |
| 140 | 3300025986 | Ga0207658_10014684 | Ga0207658_100146844 | 148 |
| 141 | 3300025986 | Ga0207658_10065107 | Ga0207658_100651071 | 148 |
| 142 | 3300026023 | Ga0207677_10296641 | Ga0207677_102966412 | 148 |
| 143 | 3300026023 | Ga0207677_11423483 | Ga0207677_114234831 | 148 |
| 144 | 3300026041 | Ga0207639_10097567 | Ga0207639_100975672 | 148 |
| 145 | 3300026067 | Ga0207678_10000587 | Ga0207678_1000058732 | 148 |
| 146 | 3300026067 | Ga0207678_10747968 | Ga0207678_107479682 | 148 |
| 147 | 3300026089 | Ga0207648_10020584 | Ga0207648_100205842 | 148 |
| 148 | 3300026116 | Ga0207674_10008156 | Ga0207674_1000815615 | 148 |
| 149 | 3300026121 | Ga0207683_10003073 | Ga0207683_1000307318 | 148 |
| 150 | 3300026142 | Ga0207698_10135650 | Ga0207698_101356502 | 148 |
| 151 | 3300026142 | Ga0207698_10247898 | Ga0207698_102478982 | 148 |
| 152 | 3300028379 | Ga0268266_10239644 | Ga0268266_102396442 | 148 |
| 153 | 3300028380 | Ga0268265_10318539 | Ga0268265_103185392 | 148 |
| 154 | 3300028381 | Ga0268264_11117044 | Ga0268264_111170442 | 148 |
| 155 | 3300031548 | Ga0307408_100153493 | Ga0307408_1001534932 | 148 |
| 156 | 3300031548 | Ga0307408_100935704 | Ga0307408_1009357042 | 148 |
| 157 | 3300031731 | Ga0307405_10035848 | Ga0307405_100358484 | 148 |
| 158 | 3300031731 | Ga0307405_10162104 | Ga0307405_101621043 | 148 |
| 159 | 3300031731 | Ga0307405_10360516 | Ga0307405_103605162 | 148 |
| 160 | 3300031824 | Ga0307413_10177328 | Ga0307413_101773282 | 148 |
| 161 | 3300031824 | Ga0307413_10268352 | Ga0307413_102683521 | 148 |
| 162 | 3300031852 | Ga0307410_10017591 | Ga0307410_100175916 | 148 |
| 163 | 3300031852 | Ga0307410_10629064 | Ga0307410_106290641 | 148 |
| 164 | 3300031901 | Ga0307406_10043465 | Ga0307406_100434652 | 148 |
| 165 | 3300031901 | Ga0307406_10077798 | Ga0307406_100777982 | 148 |
| 166 | 3300031901 | Ga0307406_10129901 | Ga0307406_101299012 | 148 |
| 167 | 3300031911 | Ga0307412_11111513 | Ga0307412_111115131 | 148 |
| 168 | 3300032002 | Ga0307416_100501386 | Ga0307416_1005013862 | 148 |
| 169 | 3300032002 | Ga0307416_100576645 | Ga0307416_1005766452 | 148 |
| 170 | 3300032005 | Ga0307411_10017646 | Ga0307411_100176461 | 148 |
| 171 | 3300032005 | Ga0307411_10397532 | Ga0307411_103975322 | 148 |
| 172 | 3300032005 | Ga0307411_11007506 | Ga0307411_110075062 | 148 |
| 173 | 3300035089 | Ga0373944_0197762 | Ga0373944_0197762_230_676 | 148 |
| 174 | 3300035692 | Ga0373935_0027403 | Ga0373935_0027403_335_781 | 148 |
| 175 | 3300037312 | Ga0395899_0023532 | Ga0395899_0023532_3791_4237 | 148 |
| 176 | 3300037312 | Ga0395899_0140709 | Ga0395899_0140709_235_681 | 148 |
| 177 | 3300037418 | Ga0395900_0001365 | Ga0395900_0001365_23408_23854 | 148 |
| 178 | 3300037418 | Ga0395900_0197114 | Ga0395900_0197114_423_869 | 148 |
| 179 | 3300037418 | Ga0395900_0442166 | Ga0395900_0442166_25_471 | 148 |
| 180 | 3300037418 | Ga0395900_0701702 | Ga0395900_0701702_78_524 | 148 |
| 181 | 3300037418 | Ga0395900_0993517 | Ga0395900_0993517_48_494 | 148 |
| 182 | 3300037471 | Ga0395905_0003299 | Ga0395905_0003299_4407_4853 | 148 |
| 183 | 3300037471 | Ga0395905_0031796 | Ga0395905_0031796_2338_2784 | 148 |
| 184 | 3300037471 | Ga0395905_0031976 | Ga0395905_0031976_3101_3547 | 148 |
| 185 | 3300037471 | Ga0395905_0070198 | Ga0395905_0070198_251_697 | 148 |
| 186 | 3300037471 | Ga0395905_0582424 | Ga0395905_0582424_448_894 | 148 |
| 187 | 3300038443 | Ga0395901_0062262 | Ga0395901_0062262_1489_1935 | 148 |
| 188 | 3300038443 | Ga0395901_0125783 | Ga0395901_0125783_2119_2565 | 148 |
| 189 | 3300038443 | Ga0395901_0167026 | Ga0395901_0167026_949_1395 | 148 |
| 190 | 3300038443 | Ga0395901_0221152 | Ga0395901_0221152_352_798 | 148 |
| 191 | 3300038443 | Ga0395901_0428935 | Ga0395901_0428935_517_963 | 148 |
| 192 | 3300038705 | Ga0237819_01142 | Ga0237819_01142_3529_4014 | 148 |
| 193 | 3300039145 | Ga0237816_00355 | Ga0237816_00355_855_1340 | 148 |
| 194 | 3300044656 | Ga0466969_0001948 | Ga0466969_0001948_3284_3742 | 148 |
| 195 | 3300044658 | Ga0466972_0310339 | Ga0466972_0310339_185_631 | 148 |
| 196 | 3300044683 | Ga0466965_0307401 | Ga0466965_0307401_90_560 | 148 |
| 197 | 3300044684 | Ga0466966_0117089 | Ga0466966_0117089_761_1219 | 148 |
| 198 | 3300044684 | Ga0466966_0146299 | Ga0466966_0146299_902_1348 | 148 |
| 199 | 3300044693 | Ga0466961_0038378 | Ga0466961_0038378_2083_2529 | 148 |
| 200 | 3300044693 | Ga0466961_0054993 | Ga0466961_0054993_388_834 | 148 |
| 201 | 3300044694 | Ga0466963_0056850 | Ga0466963_0056850_1009_1455 | 148 |
| 202 | 3300044719 | Ga0466971_0100714 | Ga0466971_0100714_839_1285 | 148 |
| 203 | 3300044765 | Ga0466970_0043532 | Ga0466970_0043532_530_976 | 148 |
| 204 | 3300044842 | Ga0466957_0012718 | Ga0466957_0012718_2682_3128 | 148 |
| 205 | 3300044842 | Ga0466957_0025876 | Ga0466957_0025876_1489_1935 | 148 |
| 206 | 3300045049 | Ga0466959_0047226 | Ga0466959_0047226_1906_2364 | 148 |
| 207 | 3300045049 | Ga0466959_0047802 | Ga0466959_0047802_282_728 | 148 |
| 208 | 3300045049 | Ga0466959_0061666 | Ga0466959_0061666_1689_2135 | 148 |
| 209 | 3300045836 | Ga0466958_0035242 | Ga0466958_0035242_825_1271 | 148 |
| 210 | 3300046491 | Ga0495584_0685824 | Ga0495584_0685824_19_465 | 148 |
| 211 | 3300046539 | Ga0495621_0000049 | Ga0495621_0000049_9732_10178 | 148 |
| 212 | 3300046684 | Ga0495669_0035468 | Ga0495669_0035468_114_560 | 148 |
| 213 | 3300046691 | Ga0495670_0000265 | Ga0495670_0000265_3663_4109 | 148 |
| 214 | 3300048906 | Ga0496103_0476217 | Ga0496103_0476217_157_603 | 148 |
| 215 | 3300053119 | Ga0500595_048609 | Ga0500595_048609_461_928 | 148 |
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3dcf-assembly1.cif.gz_B | crystal structure of transcriptional regulator of the tetr/acrr family (yp_290855.1) from thermobifida fusca yx-er1 at 2.50 a resolution | 0.468 | 12 | 112 |
| 5dbo-assembly1.cif.gz_D | crystal structure of the tetrameric eif2b-beta2-delta2 complex from c. thermophilum | 0.3699 | 9 | 111 |
| 1ls8-assembly1.cif.gz_A | nmr structure of the unliganded bombyx mori pheromone-binding protein at physiological ph | 0.3678 | 14 | 120 |
| 1vb5-assembly1.cif.gz_B | crystal structure analysis of the pyrococcus horikoshii ot3 translation initiation factor eif-2b | 0.3505 | 14 | 112 |
| 3dcf-assembly1.cif.gz_B | crystal structure of transcriptional regulator of the tetr/acrr family (yp_290855.1) from thermobifida fusca yx-er1 at 2.50 a resolution | 0.35 | 12 | 112 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3dcfB02 | Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;Tetracycline Repressor, domain 2 | 0.4586 | 12 | 112 | 1.10.357.10 |
| af_A0A1D6LXJ5_1691_1767_1.25.10.10 | Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant | 0.4475 | 12 | 67 | 1.25.10.10 |
| af_Q5VTA0_1_146_1.25.40.90 | Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat; | 0.415 | 1 | 118 | 1.25.40.90 |
| af_Q57586_10_105_1.20.120.420 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);translation initiation factor eif-2b, domain 1 | 0.3884 | 15 | 112 | 1.20.120.420 |
| af_Q57586_10_105_1.20.120.420 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);translation initiation factor eif-2b, domain 1 | 0.3744 | 15 | 112 | 1.20.120.420 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2E2ZTP1-F1-model_v4 | deleted | 0.9871 | 8 | 140 |
|
| AF-A0A3R9X848-F1-model_v4 | Uncharacterized protein | 0.9868 | 1 | 148 |
|
| AF-A0A124JWD0-F1-model_v4 | Uncharacterized protein | 0.9867 | 8 | 148 |
|
| AF-W0A8C7-F1-model_v4 | Uncharacterized protein | 0.9846 | 4 | 144 |
|
| AF-A0A3R9X848-F1-model_v4 | Uncharacterized protein | 0.9803 | 1 | 148 |
|
Predicted Structure (AlphaFold2)
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