F326591

General Info

Members Datasets Scaffolds Average Seq Length
215 133 430 476

Family's Representative Sequence

Representative Sequence 3300031711|Ga0265314_10000439|Ga0265314_1000043913
Length 498
Sequence MNAFRGLSHMAGHSAIKTLIRTAALGALLAGAGLTPINGVEAADQPTPVIQVAASEATSRFVPLGIGKSVAIDLPADIKDVLVANPKVANAVIRSSRRVYMIGVAVGQTNIFFFDANGKQIAGFDIAVTRDLNGVRGALKQTLPDSDIRIEGIGTDGIILSGTAASGAESQQAYDIATRLVGDGTRVVNGISVRGRDQVMLKVTVAEVRRDVIKQLGVDLAAPSLSYGAAVVNLNTQNAFSATGQTLSNTAFGGSWKGVTATLKAMDRAGVLRTLAEPNLTAISGETATFMAGGEFPIPNGLSCDTTKSPPVCQAQVDFKKFGVSLVFTPVVLSEGRISLKVMTEVSDLSTDNALTLAVPGSTQTLTIPSISTRRAETTVEIPSGGSLALAGMIQEQTKQQINGVPGLMQLPILGALFKSRDYINNQTELMVIVTPYIVRAVAQKMLSKPDDGFADPSDPQTALLGKLNRIYGTANQPASAPAEPAGGYRGKYGFILD

Samples

Sample ID Description Type Environment
1 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
2 3300000041 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
22 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
33 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
34 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
35 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
56 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
57 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
60 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
61 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
62 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
63 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
64 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
65 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
66 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
67 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
68 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
69 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
70 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
71 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
72 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
73 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
82 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
83 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
84 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
85 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
86 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
87 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
88 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
89 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
90 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
91 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
92 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
93 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
94 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
95 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
96 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
97 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
98 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
101 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
102 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
116 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
117 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
118 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
119 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
120 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
121 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
122 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
123 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
124 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
125 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
126 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
129 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
130 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
131 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
132 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
133 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.93
Nodule 0
Rhizoplane 1.4
Rhizosphere 94.88
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265314_10000439 3300031711 Bacteria 55613
2 ARcpr5oldR_c000137 3300000041 Bacteria 12442
3 Ga0065712_10079222 3300005290 Bacteria 3235
4 Ga0070658_10004547 3300005327 Bacteria 11276
5 Ga0070683_100122156 3300005329 Bacteria 2461
6 Ga0070680_100011487 3300005336 Bacteria 6852
7 Ga0070680_100150370 3300005336 Bacteria 1954
8 Ga0070660_100019659 3300005339 Bacteria 4952
9 Ga0070689_100015071 3300005340 Bacteria 5629
10 Ga0070687_100074732 3300005343 Bacteria 1830
11 Ga0070714_100021688 3300005435 Bacteria 5257
12 Ga0070710_10012893 3300005437 Bacteria 4165
13 Ga0070710_10038486 3300005437 Bacteria 2627
14 Ga0070681_10029471 3300005458 Bacteria 5512
15 Ga0070681_10069951 3300005458 Bacteria 3475
16 Ga0070679_100018485 3300005530 Bacteria 6765
17 Ga0070695_100062509 3300005545 Bacteria 2418
18 Ga0070696_100021818 3300005546 Bacteria 4343
19 Ga0070693_100042694 3300005547 Bacteria 2556
20 Ga0068855_100010706 3300005563 Bacteria 11066
21 Ga0068855_100051469 3300005563 Bacteria 4851
22 Ga0070664_100172692 3300005564 Bacteria 1918
23 Ga0070664_100209000 3300005564 Bacteria 1744
24 Ga0068863_100081782 3300005841 Bacteria 3060
25 Ga0081455_10000059 3300005937 Bacteria 119148
26 Ga0081455_10010795 3300005937 Bacteria 9232
27 Ga0081455_10034830 3300005937 Bacteria 4507
28 Ga0081540_1000075 3300005983 Bacteria 106804
29 Ga0070715_10006767 3300006163 Bacteria 3912
30 Ga0075434_100035984 3300006871 Bacteria 4896
31 Ga0105240_10042112 3300009093 Bacteria 5822
32 Ga0111539_10006361 3300009094 Bacteria 15230
33 Ga0111539_10079190 3300009094 Bacteria 3865
34 Ga0111539_10110730 3300009094 Bacteria 3222
35 Ga0105238_10071204 3300009551 Bacteria 3474
36 Ga0105246_10047283 3300011119 Bacteria 2938
37 Ga0157370_10014911 3300013104 Bacteria 7927
38 Ga0157370_10030956 3300013104 Bacteria 5240
39 Ga0157369_10122828 3300013105 Bacteria 2754
40 Ga0157378_10067684 3300013297 Bacteria 3201
41 Ga0157378_10267187 3300013297 Bacteria 1644
42 Ga0163163_10050530 3300014325 Bacteria 4094
43 Ga0213876_10002176 3300021384 Bacteria 11577
44 Ga0213875_10000011 3300021388 Bacteria 332447
45 Ga0209233_1005089 3300025261 Bacteria 4398
46 Ga0207685_10030244 3300025905 Bacteria 1926
47 Ga0207707_10048321 3300025912 Bacteria 3706
48 Ga0207695_10028693 3300025913 Bacteria 6161
49 Ga0207693_10018600 3300025915 Bacteria 5531
50 Ga0207660_10052152 3300025917 Bacteria 2911
51 Ga0207660_10065705 3300025917 Bacteria 2622
52 Ga0207662_10008217 3300025918 Bacteria 5710
53 Ga0207657_10040730 3300025919 Bacteria 4114
54 Ga0207652_10010745 3300025921 Bacteria 7371
55 Ga0207652_10151065 3300025921 Bacteria 2080
56 Ga0207694_10049264 3300025924 Bacteria 3261
57 Ga0207687_10057361 3300025927 Bacteria 2736
58 Ga0207664_10029442 3300025929 Bacteria 4182
59 Ga0207664_10050577 3300025929 Bacteria 3277
60 Ga0207706_10008973 3300025933 Bacteria 9203
61 Ga0207670_10001957 3300025936 Bacteria 10798
62 Ga0207665_10050894 3300025939 Bacteria 2787
63 Ga0207665_10107353 3300025939 Bacteria 1957
64 Ga0207679_10139151 3300025945 Bacteria 1960
65 Ga0207667_10053060 3300025949 Bacteria 4267
66 Ga0207667_10091817 3300025949 Bacteria 3136
67 Ga0207640_10077921 3300025981 Bacteria 2254
68 Ga0207639_10184178 3300026041 Bacteria 1779
69 Ga0207676_10011733 3300026095 Bacteria 6265
70 Ga0209967_1003081 3300027364 Bacteria 2185
71 Ga0207428_10050096 3300027907 Bacteria 3342
72 Ga0207428_10105092 3300027907 Bacteria 2178
73 Ga0265337_1001195 3300028556 Bacteria 13202
74 Ga0265318_10011238 3300028577 Bacteria 3862
75 Ga0265338_10021310 3300028800 Bacteria 6764
76 Ga0265338_10045488 3300028800 Bacteria 4035
77 Ga0265330_10007719 3300031235 Bacteria 5224
78 Ga0265332_10003996 3300031238 Bacteria 7017
79 Ga0265332_10012252 3300031238 Bacteria 3805
80 Ga0265320_10037230 3300031240 Bacteria 2451
81 Ga0265325_10000672 3300031241 Bacteria 24929
82 Ga0265325_10007938 3300031241 Bacteria 6305
83 Ga0265340_10040660 3300031247 Bacteria 2289
84 Ga0265339_10040715 3300031249 Bacteria 2581
85 Ga0265331_10007677 3300031250 Bacteria 6211
86 Ga0265316_10026170 3300031344 Bacteria 4860
87 Ga0265316_10029600 3300031344 Bacteria 4499
88 Ga0307513_10080338 3300031456 Bacteria 3364
89 Ga0265313_10000525 3300031595 Bacteria 40049
90 Ga0265313_10011516 3300031595 Bacteria 5490
91 Ga0265313_10011978 3300031595 Bacteria 5346
92 Ga0265314_10003505 3300031711 Bacteria 15140
93 Ga0265342_10000525 3300031712 Bacteria 40764
94 Ga0265342_10000882 3300031712 Bacteria 29894
95 Ga0265342_10006148 3300031712 Bacteria 8986
96 Ga0265342_10011895 3300031712 Bacteria 5921
97 Ga0265342_10030931 3300031712 Bacteria 3313
98 Ga0373954_0028775 3300035118 Bacteria 2556
99 Ga0373954_0057240 3300035118 Bacteria 1836
100 Ga0373956_0057039 3300035119 Bacteria 1764
101 Ga0373955_0013574 3300035172 Bacteria 3943
102 Ga0373933_0010197 3300035724 Bacteria 5146
103 Ga0373937_0077762 3300036401 Bacteria 3066
104 Ga0316582_0042618 3300036647 Bacteria 2844
105 Ga0395900_0001475 3300037418 Bacteria 28056
106 Ga0395898_0022707 3300037466 Bacteria 6350
107 Ga0395898_0104909 3300037466 Bacteria 2710
108 Ga0436364_0728139 3300037853 Bacteria 64829
109 Ga0395901_0011499 3300038443 Bacteria 8969
110 Ga0395901_0066596 3300038443 Bacteria 3751
111 Ga0436365_0853259 3300039437 Bacteria 3197
112 Ga0436365_1871429 3300039437 Bacteria 4573
113 Ga0439453_0000680 3300041408 Bacteria 3899
114 Ga0439435_0000891 3300042436 Bacteria 5139
115 Ga0439464_0014522 3300042439 Bacteria 2118
116 Ga0439460_0003320 3300042461 Bacteria 3897
117 Ga0439440_0001866 3300042993 Bacteria 3909
118 Ga0466961_0065431 3300044693 Bacteria 2310
119 Ga0466963_0003055 3300044694 Bacteria 9475
120 Ga0466958_0009303 3300045836 Bacteria 5474
121 Ga0466967_0001550 3300045976 Bacteria 13463
122 Ga0495592_0077477 3300046454 Bacteria 2410
123 Ga0495638_0079447 3300046460 Bacteria 1994
124 Ga0495651_0137231 3300046462 Bacteria 1778
125 Ga0495582_0043845 3300046473 Bacteria 2463
126 Ga0495608_0044739 3300046511 Bacteria 2954
127 Ga0495657_0066768 3300046675 Bacteria 2362
128 Ga0495674_0099090 3300047319 Bacteria 2481
129 Ga0495675_0057135 3300047444 Bacteria 2474
130 Ga0495615_0005857 3300048090 Bacteria 2240
131 Ga0496104_0056720 3300048907 Bacteria 3705
132 Ga0496112_0164328 3300048915 Bacteria 2186
133 Ga0496115_0020775 3300048918 Bacteria 5066
134 Ga0501031_0022900 3300049568 Bacteria 4074
135 Ga0501032_0009541 3300049569 Bacteria 7036
136 Ga0501032_0011247 3300049569 Bacteria 6427
137 Ga0501033_0014637 3300049570 Bacteria 5956
138 Ga0501033_0068718 3300049570 Bacteria 2604
139 Ga0501034_0000734 3300049571 Bacteria 49577
140 Ga0501034_0012202 3300049571 Bacteria 8885
141 Ga0501034_0013749 3300049571 Bacteria 8326
142 Ga0501034_0019316 3300049571 Bacteria 6972
143 Ga0501034_0048876 3300049571 Bacteria 4268
144 Ga0501036_0079524 3300049572 Bacteria 2772
145 Ga0501036_0081565 3300049572 Bacteria 2733
146 Ga0501037_0001189 3300049573 Bacteria 19229
147 Ga0501037_0010168 3300049573 Bacteria 6903
148 Ga0501038_0004064 3300049574 Bacteria 13606
149 Ga0501038_0004684 3300049574 Bacteria 12732
150 Ga0501038_0096376 3300049574 Bacteria 2470
151 Ga0501039_0038077 3300049575 Bacteria 3715
152 Ga0501039_0088813 3300049575 Bacteria 2407
153 Ga0501039_0124764 3300049575 Bacteria 2019
154 Ga0501042_0042382 3300049578 Bacteria 3240
155 Ga0501043_0005879 3300049579 Bacteria 9869
156 Ga0501043_0008823 3300049579 Bacteria 7935
157 Ga0501043_0015284 3300049579 Bacteria 6012
158 Ga0501043_0116517 3300049579 Bacteria 2096
159 Ga0501046_0006941 3300049580 Bacteria 9979
160 Ga0501046_0017912 3300049580 Bacteria 5905
161 Ga0501046_0070864 3300049580 Bacteria 2709
162 Ga0501047_0000124 3300049581 Bacteria 94721
163 Ga0501047_0010416 3300049581 Bacteria 8797
164 Ga0501047_0025219 3300049581 Bacteria 5712
165 Ga0501047_0050728 3300049581 Bacteria 4007
166 Ga0501047_0063561 3300049581 Bacteria 3560
167 Ga0501048_0000150 3300049582 Bacteria 42721
168 Ga0501048_0001094 3300049582 Bacteria 20335
169 Ga0501067_0007941 3300049583 Bacteria 5894
170 Ga0501068_0021687 3300049584 Bacteria 3753
171 Ga0501069_0005884 3300049585 Bacteria 6390
172 Ga0501069_0008121 3300049585 Bacteria 5515
173 Ga0501069_0092302 3300049585 Bacteria 1712
174 Ga0501070_0019535 3300049586 Bacteria 5682
175 Ga0501070_0023413 3300049586 Bacteria 5173
176 Ga0501070_0029962 3300049586 Bacteria 4559
177 Ga0501070_0175227 3300049586 Bacteria 1766
178 Ga0501071_0009094 3300049587 Bacteria 6596
179 Ga0501071_0147701 3300049587 Bacteria 1752
180 Ga0501073_0001123 3300049589 Bacteria 19412
181 Ga0501073_0030393 3300049589 Bacteria 3857
182 Ga0501074_0005366 3300049590 Bacteria 9220
183 Ga0501074_0026651 3300049590 Bacteria 4191
184 Ga0501074_0027803 3300049590 Bacteria 4100
185 Ga0501077_0016476 3300049593 Bacteria 4657
186 Ga0501079_0025065 3300049741 Bacteria 4576
187 Ga0501080_0000074 3300049742 Bacteria 66985
188 Ga0501080_0023984 3300049742 Bacteria 5655
189 Ga0501080_0044509 3300049742 Bacteria 4132
190 Ga0501080_0046373 3300049742 Bacteria 4046
191 Ga0501083_0001836 3300049744 Bacteria 14565
192 Ga0501083_0003149 3300049744 Bacteria 11481
193 Ga0501083_0036680 3300049744 Bacteria 3342
194 Ga0501083_0062080 3300049744 Bacteria 2494
195 Ga0501083_0119878 3300049744 Bacteria 1726
196 Ga0501035_0001398 3300049822 Bacteria 24778
197 Ga0501035_0022024 3300049822 Bacteria 5854
198 Ga0501035_0059488 3300049822 Bacteria 3402
199 Ga0501044_0000144 3300049823 Bacteria 87628
200 Ga0501044_0009883 3300049823 Bacteria 10367
201 Ga0501044_0010577 3300049823 Bacteria 10009
202 Ga0501044_0015498 3300049823 Bacteria 8209
203 Ga0501044_0019333 3300049823 Bacteria 7288
204 Ga0501045_0035779 3300049824 Bacteria 3606
205 nmdc:mga08y16_187334_c1 3300050511 Bacteria 2147
206 nmdc:mga08y16_20620_c1 3300050511 Bacteria 6955
207 nmdc:mga0n895_30226_c1 3300050512 Bacteria 5174
208 nmdc:mga0n895_81822_c1 3300050512 Bacteria 3218
209 Ga0500641_0051165 3300053096 Bacteria 1699
210 Ga0501084_0043717 3300054114 Bacteria 3747
211 Ga0501084_0078360 3300054114 Bacteria 2770
212 Ga0501082_0074592 3300060353 Bacteria 2922
213 Ga0501082_0074629 3300060353 Bacteria 2921
214 Ga0501082_0089474 3300060353 Bacteria 2658
215 Ga0501082_0193793 3300060353 Bacteria 1767
216 Ga0265314_10000439
217 ARcpr5oldR_c000137
218 Ga0065712_10079222
219 Ga0070658_10004547
220 Ga0070683_100122156
221 Ga0070680_100011487
222 Ga0070680_100150370
223 Ga0070660_100019659
224 Ga0070689_100015071
225 Ga0070687_100074732
226 Ga0070714_100021688
227 Ga0070710_10012893
228 Ga0070710_10038486
229 Ga0070681_10029471
230 Ga0070681_10069951
231 Ga0070679_100018485
232 Ga0070695_100062509
233 Ga0070696_100021818
234 Ga0070693_100042694
235 Ga0068855_100010706
236 Ga0068855_100051469
237 Ga0070664_100172692
238 Ga0070664_100209000
239 Ga0068863_100081782
240 Ga0081455_10000059
241 Ga0081455_10010795
242 Ga0081455_10034830
243 Ga0081540_1000075
244 Ga0070715_10006767
245 Ga0075434_100035984
246 Ga0105240_10042112
247 Ga0111539_10006361
248 Ga0111539_10079190
249 Ga0111539_10110730
250 Ga0105238_10071204
251 Ga0105246_10047283
252 Ga0157370_10014911
253 Ga0157370_10030956
254 Ga0157369_10122828
255 Ga0157378_10067684
256 Ga0157378_10267187
257 Ga0163163_10050530
258 Ga0213876_10002176
259 Ga0213875_10000011
260 Ga0209233_1005089
261 Ga0207685_10030244
262 Ga0207707_10048321
263 Ga0207695_10028693
264 Ga0207693_10018600
265 Ga0207660_10052152
266 Ga0207660_10065705
267 Ga0207662_10008217
268 Ga0207657_10040730
269 Ga0207652_10010745
270 Ga0207652_10151065
271 Ga0207694_10049264
272 Ga0207687_10057361
273 Ga0207664_10029442
274 Ga0207664_10050577
275 Ga0207706_10008973
276 Ga0207670_10001957
277 Ga0207665_10050894
278 Ga0207665_10107353
279 Ga0207679_10139151
280 Ga0207667_10053060
281 Ga0207667_10091817
282 Ga0207640_10077921
283 Ga0207639_10184178
284 Ga0207676_10011733
285 Ga0209967_1003081
286 Ga0207428_10050096
287 Ga0207428_10105092
288 Ga0265337_1001195
289 Ga0265318_10011238
290 Ga0265338_10021310
291 Ga0265338_10045488
292 Ga0265330_10007719
293 Ga0265332_10003996
294 Ga0265332_10012252
295 Ga0265320_10037230
296 Ga0265325_10000672
297 Ga0265325_10007938
298 Ga0265340_10040660
299 Ga0265339_10040715
300 Ga0265331_10007677
301 Ga0265316_10026170
302 Ga0265316_10029600
303 Ga0307513_10080338
304 Ga0265313_10000525
305 Ga0265313_10011516
306 Ga0265313_10011978
307 Ga0265314_10003505
308 Ga0265342_10000525
309 Ga0265342_10000882
310 Ga0265342_10006148
311 Ga0265342_10011895
312 Ga0265342_10030931
313 Ga0373954_0028775
314 Ga0373954_0057240
315 Ga0373956_0057039
316 Ga0373955_0013574
317 Ga0373933_0010197
318 Ga0373937_0077762
319 Ga0316582_0042618
320 Ga0395900_0001475
321 Ga0395898_0022707
322 Ga0395898_0104909
323 Ga0436364_0728139
324 Ga0395901_0011499
325 Ga0395901_0066596
326 Ga0436365_0853259
327 Ga0436365_1871429
328 Ga0439453_0000680
329 Ga0439435_0000891
330 Ga0439464_0014522
331 Ga0439460_0003320
332 Ga0439440_0001866
333 Ga0466961_0065431
334 Ga0466963_0003055
335 Ga0466958_0009303
336 Ga0466967_0001550
337 Ga0495592_0077477
338 Ga0495638_0079447
339 Ga0495651_0137231
340 Ga0495582_0043845
341 Ga0495608_0044739
342 Ga0495657_0066768
343 Ga0495674_0099090
344 Ga0495675_0057135
345 Ga0495615_0005857
346 Ga0496104_0056720
347 Ga0496112_0164328
348 Ga0496115_0020775
349 Ga0501031_0022900
350 Ga0501032_0009541
351 Ga0501032_0011247
352 Ga0501033_0014637
353 Ga0501033_0068718
354 Ga0501034_0000734
355 Ga0501034_0012202
356 Ga0501034_0013749
357 Ga0501034_0019316
358 Ga0501034_0048876
359 Ga0501036_0079524
360 Ga0501036_0081565
361 Ga0501037_0001189
362 Ga0501037_0010168
363 Ga0501038_0004064
364 Ga0501038_0004684
365 Ga0501038_0096376
366 Ga0501039_0038077
367 Ga0501039_0088813
368 Ga0501039_0124764
369 Ga0501042_0042382
370 Ga0501043_0005879
371 Ga0501043_0008823
372 Ga0501043_0015284
373 Ga0501043_0116517
374 Ga0501046_0006941
375 Ga0501046_0017912
376 Ga0501046_0070864
377 Ga0501047_0000124
378 Ga0501047_0010416
379 Ga0501047_0025219
380 Ga0501047_0050728
381 Ga0501047_0063561
382 Ga0501048_0000150
383 Ga0501048_0001094
384 Ga0501067_0007941
385 Ga0501068_0021687
386 Ga0501069_0005884
387 Ga0501069_0008121
388 Ga0501069_0092302
389 Ga0501070_0019535
390 Ga0501070_0023413
391 Ga0501070_0029962
392 Ga0501070_0175227
393 Ga0501071_0009094
394 Ga0501071_0147701
395 Ga0501073_0001123
396 Ga0501073_0030393
397 Ga0501074_0005366
398 Ga0501074_0026651
399 Ga0501074_0027803
400 Ga0501077_0016476
401 Ga0501079_0025065
402 Ga0501080_0000074
403 Ga0501080_0023984
404 Ga0501080_0044509
405 Ga0501080_0046373
406 Ga0501083_0001836
407 Ga0501083_0003149
408 Ga0501083_0036680
409 Ga0501083_0062080
410 Ga0501083_0119878
411 Ga0501035_0001398
412 Ga0501035_0022024
413 Ga0501035_0059488
414 Ga0501044_0000144
415 Ga0501044_0009883
416 Ga0501044_0010577
417 Ga0501044_0015498
418 Ga0501044_0019333
419 Ga0501045_0035779
420 nmdc:mga08y16_187334_c1
421 nmdc:mga08y16_20620_c1
422 nmdc:mga0n895_30226_c1
423 nmdc:mga0n895_81822_c1
424 Ga0500641_0051165
425 Ga0501084_0043717
426 Ga0501084_0078360
427 Ga0501082_0074592
428 Ga0501082_0074629
429 Ga0501082_0089474
430 Ga0501082_0193793

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13629

T2SS-T3SS_pil_N

Pilus formation protein N terminal region

58

129

0.96

PF00263

Secretin

Bacterial type II and III secretion system protein

265

440

0.91

PF04972

BON

BON domain

131

195

0.84

Map