F326667

General Info

Members Datasets Scaffolds Average Seq Length
215 158 215 132

Family's Representative Sequence

Representative Sequence 3300036647|Ga0316582_0044234|Ga0316582_0044234_114_497
Length 127
Sequence MIYQGSCHCGAIRFEVEAPEDLEVDECNCSICAKSGYLHLIVPKSKFRLLSGEDQMTTYTFNTGVAKHLFCKVCGIKPFYIPRSNPDGYAINARCLDTEPCSLSIMPFDGQNWESHAHTLSHKTKET

Samples

Sample ID Description Type Environment
1 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
61 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
62 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
63 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
96 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
97 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
98 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
99 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
100 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
105 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
106 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
107 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
108 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
112 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
113 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
114 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
115 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
116 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
117 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
118 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
119 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
120 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
123 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
124 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
125 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
126 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
129 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
130 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
131 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
132 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
133 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
134 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
137 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
138 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
139 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
140 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
141 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
143 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
146 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
147 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
148 3300049760 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control Metagenome Rhizosphere
149 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
150 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
156 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.4
Nodule 0
Rhizoplane 4.19
Rhizosphere 87.91
Stem 0
Stem Tuber 0
Unclassified 6.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1015960 3300003214 Bacteria 1010
2 Ga0070658_10095451 3300005327 Bacteria 2455
3 Ga0070658_10487332 3300005327 Bacteria 1064
4 Ga0070660_100282233 3300005339 Bacteria 1359
5 Ga0070691_10445317 3300005341 Unclassified 738
6 Ga0070671_100139633 3300005355 Bacteria 2044
7 Ga0070688_100074578 3300005365 Bacteria 2179
8 Ga0070713_100000008 3300005436 Bacteria 160153
9 Ga0070710_10082964 3300005437 Bacteria 1875
10 Ga0070705_100265853 3300005440 Bacteria 1212
11 Ga0070705_100377007 3300005440 Bacteria 1043
12 Ga0070700_100077044 3300005441 Bacteria 2143
13 Ga0070694_100880357 3300005444 Bacteria 738
14 Ga0070708_100341547 3300005445 Bacteria 1411
15 Ga0070663_100021096 3300005455 Bacteria 4326
16 Ga0070663_101228772 3300005455 Bacteria 659
17 Ga0070681_10161235 3300005458 Bacteria 2167
18 Ga0070685_10000363 3300005466 Bacteria 27528
19 Ga0068853_100007225 3300005539 Bacteria 8898
20 Ga0068853_101517849 3300005539 Bacteria 649
21 Ga0070695_100194008 3300005545 Bacteria 1447
22 Ga0070665_100676378 3300005548 Bacteria 1045
23 Ga0070704_100192127 3300005549 Bacteria 1642
24 Ga0068855_100115703 3300005563 Bacteria 3074
25 Ga0068855_100333496 3300005563 Bacteria 1674
26 Ga0068855_100597711 3300005563 Bacteria 1190
27 Ga0070664_100159139 3300005564 Bacteria 1997
28 Ga0070664_102042895 3300005564 Bacteria 544
29 Ga0068857_100032889 3300005577 Bacteria 4585
30 Ga0068856_100000572 3300005614 Bacteria 40266
31 Ga0068856_100010057 3300005614 Bacteria 9191
32 Ga0068856_100998842 3300005614 Bacteria 855
33 Ga0070702_100476140 3300005615 Unclassified 911
34 Ga0068852_100089416 3300005616 Bacteria 2752
35 Ga0068852_100092199 3300005616 Bacteria 2713
36 Ga0068852_100132982 3300005616 Bacteria 2293
37 Ga0068852_100251252 3300005616 Unclassified 1694
38 Ga0068852_101386295 3300005616 Bacteria 725
39 Ga0068859_100343795 3300005617 Bacteria 1586
40 Ga0068859_100640740 3300005617 Bacteria 1155
41 Ga0068864_100531312 3300005618 Bacteria 1135
42 Ga0068866_10077990 3300005718 Unclassified 1771
43 Ga0068851_10255841 3300005834 Bacteria 994
44 Ga0068863_100685347 3300005841 Bacteria 1018
45 Ga0070716_101048675 3300006173 Unclassified 647
46 Ga0070712_100045730 3300006175 Bacteria 3024
47 Ga0097621_100072034 3300006237 Bacteria 2857
48 Ga0097621_100559877 3300006237 Bacteria 1041
49 Ga0068871_100100872 3300006358 Bacteria 2418
50 Ga0075431_100160018 3300006847 Bacteria 2315
51 Ga0075434_100095821 3300006871 Bacteria 2973
52 Ga0075434_100117451 3300006871 Bacteria 2673
53 Ga0075434_101296460 3300006871 Unclassified 739
54 Ga0068865_100001448 3300006881 Bacteria 13805
55 Ga0075436_100000053 3300006914 Bacteria 69483
56 Ga0075436_100001713 3300006914 Bacteria 15019
57 Ga0097620_100343834 3300006931 Bacteria 1586
58 Ga0097620_100640781 3300006931 Bacteria 1155
59 Ga0075435_100373070 3300007076 Bacteria 1225
60 Ga0099794_10073008 3300007265 Bacteria 1683
61 Ga0105240_10004822 3300009093 Bacteria 20328
62 Ga0105240_10603179 3300009093 Bacteria 1209
63 Ga0105245_10077442 3300009098 Bacteria 3032
64 Ga0105245_11190959 3300009098 Bacteria 810
65 Ga0105245_12686783 3300009098 Bacteria 551
66 Ga0105243_10078338 3300009148 Bacteria 2690
67 Ga0105241_11487937 3300009174 Bacteria 651
68 Ga0105248_10617672 3300009177 Bacteria 1223
69 Ga0105237_10012751 3300009545 Bacteria 8841
70 Ga0105238_10002595 3300009551 Bacteria 18013
71 Ga0105238_10005451 3300009551 Bacteria 12568
72 Ga0105238_11215924 3300009551 Bacteria 778
73 Ga0105238_11906373 3300009551 Bacteria 627
74 Ga0105032_102300 3300009979 Unclassified 1714
75 Ga0105239_10018576 3300010375 Bacteria 7681
76 Ga0105239_10035123 3300010375 Bacteria 5506
77 Ga0105239_10264948 3300010375 Bacteria 1932
78 Ga0105246_10538827 3300011119 Bacteria 998
79 Ga0157374_10460016 3300013296 Bacteria 1274
80 Ga0157378_10000639 3300013297 Bacteria 32874
81 Ga0157378_10069929 3300013297 Bacteria 3150
82 Ga0163162_10054320 3300013306 Bacteria 4029
83 Ga0163162_11495267 3300013306 Bacteria 769
84 Ga0157372_11024932 3300013307 Bacteria 956
85 Ga0157372_13074688 3300013307 Bacteria 533
86 Ga0157375_10000953 3300013308 Bacteria 25072
87 Ga0163163_12377231 3300014325 Bacteria 588
88 Ga0157380_10398269 3300014326 Bacteria 1305
89 Ga0157380_10997674 3300014326 Bacteria 870
90 Ga0157376_10769618 3300014969 Bacteria 973
91 Ga0182006_1279005 3300015261 Bacteria 548
92 Ga0213876_10460823 3300021384 Bacteria 676
93 Ga0209233_1002716 3300025261 Bacteria 6379
94 Ga0207692_10059517 3300025898 Bacteria 1973
95 Ga0207642_10466716 3300025899 Unclassified 767
96 Ga0207699_10000115 3300025906 Bacteria 56719
97 Ga0207707_10119649 3300025912 Bacteria 2302
98 Ga0207695_10000651 3300025913 Bacteria 68979
99 Ga0207671_10026368 3300025914 Bacteria 4357
100 Ga0207671_10268848 3300025914 Bacteria 1343
101 Ga0207693_10000149 3300025915 Bacteria 64155
102 Ga0207657_11017005 3300025919 Unclassified 635
103 Ga0207652_10297017 3300025921 Bacteria 1458
104 Ga0207681_10635368 3300025923 Bacteria 884
105 Ga0207694_10000204 3300025924 Bacteria 58214
106 Ga0207694_10014222 3300025924 Bacteria 6001
107 Ga0207694_10492821 3300025924 Bacteria 1026
108 Ga0207694_10885109 3300025924 Bacteria 755
109 Ga0207687_10060890 3300025927 Unclassified 2664
110 Ga0207687_11182614 3300025927 Bacteria 657
111 Ga0207700_10000011 3300025928 Bacteria 266323
112 Ga0207644_10008267 3300025931 Bacteria 6816
113 Ga0207644_10377102 3300025931 Bacteria 1156
114 Ga0207706_10443465 3300025933 Bacteria 1123
115 Ga0207709_10026322 3300025935 Bacteria 3340
116 Ga0207665_10031940 3300025939 Bacteria 3485
117 Ga0207711_10466747 3300025941 Bacteria 1176
118 Ga0207711_10685008 3300025941 Bacteria 956
119 Ga0207689_10323544 3300025942 Bacteria 1280
120 Ga0207661_10697497 3300025944 Unclassified 934
121 Ga0207667_10272552 3300025949 Bacteria 1730
122 Ga0207667_10513135 3300025949 Bacteria 1215
123 Ga0207712_10660967 3300025961 Unclassified 909
124 Ga0207640_10742620 3300025981 Bacteria 845
125 Ga0207703_10545907 3300026035 Bacteria 1092
126 Ga0207639_10003520 3300026041 Bacteria 10524
127 Ga0207639_10057500 3300026041 Bacteria 2986
128 Ga0207639_10593349 3300026041 Bacteria 1021
129 Ga0207678_10074417 3300026067 Bacteria 2910
130 Ga0207678_11092243 3300026067 Bacteria 706
131 Ga0207702_10000162 3300026078 Bacteria 79378
132 Ga0207702_10258631 3300026078 Bacteria 1638
133 Ga0207702_10888184 3300026078 Bacteria 883
134 Ga0207674_10016780 3300026116 Bacteria 8003
135 Ga0207675_100147998 3300026118 Bacteria 2234
136 Ga0207698_10152174 3300026142 Bacteria 2010
137 Ga0268266_10041444 3300028379 Bacteria 3929
138 Ga0268266_11540913 3300028379 Bacteria 640
139 Ga0268265_10157191 3300028380 Bacteria 1926
140 Ga0307408_100000060 3300031548 Bacteria 132341
141 Ga0307508_10109169 3300031616 Bacteria 2366
142 Ga0307508_10364055 3300031616 Bacteria 1037
143 Ga0265314_10243758 3300031711 Bacteria 1035
144 Ga0307516_10006832 3300031730 Bacteria 13301
145 Ga0307516_10768981 3300031730 Bacteria 623
146 Ga0307410_10106722 3300031852 Bacteria 2019
147 Ga0307406_10012184 3300031901 Bacteria 4898
148 Ga0307412_10401103 3300031911 Bacteria 1116
149 Ga0307409_100196625 3300031995 Bacteria 1800
150 Ga0373937_0243296 3300036401 Bacteria 1695
151 Ga0316582_0044234 3300036647 Bacteria 2798
152 Ga0395899_0019951 3300037312 Bacteria 5086
153 Ga0395900_0112230 3300037418 Bacteria 2799
154 Ga0395900_0184965 3300037418 Bacteria 2115
155 Ga0395900_0964041 3300037418 Bacteria 774
156 Ga0395898_0532250 3300037466 Bacteria 1117
157 Ga0395905_0000491 3300037471 Bacteria 54464
158 Ga0395905_0010253 3300037471 Bacteria 9126
159 Ga0395901_0005930 3300038443 Bacteria 12375
160 Ga0395901_0399545 3300038443 Bacteria 1412
161 Ga0436365_0299433 3300039437 Bacteria 688
162 Ga0436363_0975758 3300039450 Bacteria 3036
163 Ga0451807_0717178 3300041486 Bacteria 548
164 Ga0451807_1829570 3300041486 Bacteria 2131
165 Ga0451837_0089327 3300041494 Bacteria 1535
166 Ga0451843_0185821 3300041509 Bacteria 951
167 Ga0439449_0023987 3300042007 Bacteria 2281
168 Ga0451577_1238319 3300042876 Unclassified 665
169 Ga0466965_0337158 3300044683 Bacteria 824
170 Ga0466966_0141786 3300044684 Bacteria 1468
171 Ga0466961_0123944 3300044693 Bacteria 1622
172 Ga0466959_0222048 3300045049 Bacteria 1310
173 Ga0451576_0172625 3300045051 Bacteria 2257
174 Ga0466958_0051303 3300045836 Bacteria 2497
175 Ga0466958_0463732 3300045836 Bacteria 821
176 Ga0466967_1166010 3300045976 Bacteria 768
177 Ga0466967_1253021 3300045976 Bacteria 739
178 Ga0495656_0116426 3300046615 Bacteria 1256
179 Ga0495668_0053998 3300046616 Bacteria 2221
180 Ga0495670_0103574 3300046691 Bacteria 1468
181 Ga0495604_0689282 3300047317 Unclassified 649
182 Ga0495636_0194379 3300047318 Bacteria 924
183 Ga0496101_0031418 3300048904 Bacteria 3733
184 Ga0496102_0976808 3300048905 Bacteria 768
185 Ga0496108_0062351 3300048911 Bacteria 3139
186 Ga0496109_0193944 3300048912 Bacteria 1909
187 Ga0496112_0130747 3300048915 Bacteria 2481
188 Ga0496113_0017330 3300048916 Bacteria 4997
189 Ga0496115_0000077 3300048918 Bacteria 89885
190 Ga0496117_0073061 3300048920 Bacteria 2290
191 Ga0496118_0004200 3300048921 Bacteria 17318
192 Ga0496125_0303042 3300048928 Bacteria 978
193 Ga0496126_0000047 3300048929 Bacteria 322212
194 Ga0496126_0215721 3300048929 Bacteria 1614
195 Ga0501300_076250 3300049523 Bacteria 548
196 Ga0501034_0000487 3300049571 Bacteria 64548
197 Ga0501070_0006212 3300049586 Bacteria 10174
198 Ga0501072_0030943 3300049588 Bacteria 4187
199 Ga0501073_0108007 3300049589 Bacteria 1931
200 Ga0501074_0105335 3300049590 Bacteria 2019
201 Ga0501079_0767165 3300049741 Bacteria 759
202 Ga0501080_0014890 3300049742 Bacteria 7162
203 Ga0501263_004588 3300049760 Bacteria 1529
204 Ga0501265_005763 3300049762 Bacteria 1435
205 Ga0501275_001008 3300049772 Bacteria 2932
206 Ga0501035_0619703 3300049822 Bacteria 880
207 nmdc:mga09592_409715_c1 3300050508 Unclassified 1171
208 nmdc:mga06r32_181401_c1 3300050510 Bacteria 2091
209 nmdc:mga08y16_778484_c1 3300050511 Unclassified 951
210 nmdc:mga0n895_121742_c1 3300050512 Bacteria 2630
211 nmdc:mga0rr50_134160_c1 3300050513 Bacteria 1985
212 nmdc:mga0rr50_381195_c1 3300050513 Bacteria 1189
213 nmdc:mga08x19_644_c1 3300050514 Bacteria 22569
214 nmdc:mga08x19_82_c1 3300050514 Bacteria 86410
215 Ga0500637_0000187 3300053178 Bacteria 23019

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300007265 Ga0099794_10073008 Ga0099794_100730082 112
2 3300031711 Ga0265314_10243758 Ga0265314_102437582 112
3 3300031548 Ga0307408_100000060 Ga0307408_10000006044 125
4 3300031901 Ga0307406_10012184 Ga0307406_100121842 125
5 3300005834 Ga0068851_10255841 Ga0068851_102558412 126
6 3300006871 Ga0075434_100095821 Ga0075434_1000958213 126
7 3300006914 Ga0075436_100001713 Ga0075436_1000017133 126
8 3300028380 Ga0268265_10157191 Ga0268265_101571912 126
9 3300031852 Ga0307410_10106722 Ga0307410_101067222 126
10 3300031911 Ga0307412_10401103 Ga0307412_104011032 126
11 3300050513 nmdc:mga0rr50_134160_c1 nmdc:mga0rr50_134160_c1_306_686 126
12 3300050514 nmdc:mga08x19_644_c1 nmdc:mga08x19_644_c1_21559_21939 126
13 3300005355 Ga0070671_100139633 Ga0070671_1001396334 127
14 3300014326 Ga0157380_10997674 Ga0157380_109976742 127
15 3300025931 Ga0207644_10377102 Ga0207644_103771022 127
16 3300031616 Ga0307508_10109169 Ga0307508_101091693 127
17 3300036647 Ga0316582_0044234 Ga0316582_0044234_114_497 127
18 3300041486 Ga0451807_0717178 Ga0451807_0717178_102_485 127
19 3300042876 Ga0451577_1238319 Ga0451577_1238319_181_567 127
20 3300049760 Ga0501263_004588 Ga0501263_004588_718_1101 127
21 3300053178 Ga0500637_0000187 Ga0500637_0000187_19014_19397 127
22 3300005339 Ga0070660_100282233 Ga0070660_1002822332 128
23 3300005341 Ga0070691_10445317 Ga0070691_104453171 128
24 3300005441 Ga0070700_100077044 Ga0070700_1000770442 128
25 3300005444 Ga0070694_100880357 Ga0070694_1008803572 128
26 3300005545 Ga0070695_100194008 Ga0070695_1001940082 128
27 3300005548 Ga0070665_100676378 Ga0070665_1006763782 128
28 3300005564 Ga0070664_100159139 Ga0070664_1001591393 128
29 3300005615 Ga0070702_100476140 Ga0070702_1004761402 128
30 3300005616 Ga0068852_100251252 Ga0068852_1002512522 128
31 3300005617 Ga0068859_100343795 Ga0068859_1003437953 128
32 3300005718 Ga0068866_10077990 Ga0068866_100779903 128
33 3300006237 Ga0097621_100559877 Ga0097621_1005598772 128
34 3300006871 Ga0075434_101296460 Ga0075434_1012964602 128
35 3300006931 Ga0097620_100343834 Ga0097620_1003438342 128
36 3300009098 Ga0105245_10077442 Ga0105245_100774423 128
37 3300009148 Ga0105243_10078338 Ga0105243_100783383 128
38 3300009551 Ga0105238_11215924 Ga0105238_112159242 128
39 3300025899 Ga0207642_10466716 Ga0207642_104667162 128
40 3300025919 Ga0207657_11017005 Ga0207657_110170051 128
41 3300025923 Ga0207681_10635368 Ga0207681_106353681 128
42 3300025924 Ga0207694_10885109 Ga0207694_108851092 128
43 3300025927 Ga0207687_10060890 Ga0207687_100608903 128
44 3300025931 Ga0207644_10008267 Ga0207644_100082679 128
45 3300025933 Ga0207706_10443465 Ga0207706_104434652 128
46 3300025935 Ga0207709_10026322 Ga0207709_100263222 128
47 3300025941 Ga0207711_10685008 Ga0207711_106850083 128
48 3300025942 Ga0207689_10323544 Ga0207689_103235442 128
49 3300025961 Ga0207712_10660967 Ga0207712_106609672 128
50 3300026118 Ga0207675_100147998 Ga0207675_1001479984 128
51 3300028379 Ga0268266_10041444 Ga0268266_100414442 128
52 3300031995 Ga0307409_100196625 Ga0307409_1001966253 128
53 3300037312 Ga0395899_0019951 Ga0395899_0019951_1148_1540 128
54 3300037418 Ga0395900_0112230 Ga0395900_0112230_1250_1642 128
55 3300037418 Ga0395900_0184965 Ga0395900_0184965_582_974 128
56 3300037418 Ga0395900_0964041 Ga0395900_0964041_319_711 128
57 3300037466 Ga0395898_0532250 Ga0395898_0532250_198_590 128
58 3300037471 Ga0395905_0000491 Ga0395905_0000491_41583_41975 128
59 3300037471 Ga0395905_0010253 Ga0395905_0010253_740_1132 128
60 3300038443 Ga0395901_0005930 Ga0395901_0005930_2624_3016 128
61 3300038443 Ga0395901_0399545 Ga0395901_0399545_632_1024 128
62 3300039450 Ga0436363_0975758 Ga0436363_0975758_306_692 128
63 3300048904 Ga0496101_0031418 Ga0496101_0031418_2436_2828 128
64 3300048911 Ga0496108_0062351 Ga0496108_0062351_96_488 128
65 3300048912 Ga0496109_0193944 Ga0496109_0193944_1288_1674 128
66 3300048915 Ga0496112_0130747 Ga0496112_0130747_1512_1904 128
67 3300048916 Ga0496113_0017330 Ga0496113_0017330_1688_2080 128
68 3300050511 nmdc:mga08y16_778484_c1 nmdc:mga08y16_778484_c1_452_838 128
69 3300005539 Ga0068853_101517849 Ga0068853_1015178491 130
70 3300005614 Ga0068856_100010057 Ga0068856_10001005712 130
71 3300005616 Ga0068852_100089416 Ga0068852_1000894165 130
72 3300010375 Ga0105239_10018576 Ga0105239_100185762 130
73 3300010375 Ga0105239_10264948 Ga0105239_102649483 130
74 3300013296 Ga0157374_10460016 Ga0157374_104600163 130
75 3300013297 Ga0157378_10000639 Ga0157378_1000063918 130
76 3300021384 Ga0213876_10460823 Ga0213876_104608231 130
77 3300025944 Ga0207661_10697497 Ga0207661_106974972 130
78 3300025981 Ga0207640_10742620 Ga0207640_107426202 130
79 3300026041 Ga0207639_10057500 Ga0207639_100575001 130
80 3300026041 Ga0207639_10593349 Ga0207639_105933491 130
81 3300026078 Ga0207702_10258631 Ga0207702_102586311 130
82 3300031616 Ga0307508_10364055 Ga0307508_103640552 130
83 3300031730 Ga0307516_10006832 Ga0307516_100068329 130
84 3300031730 Ga0307516_10768981 Ga0307516_107689811 130
85 3300039437 Ga0436365_0299433 Ga0436365_0299433_244_663 130
86 3300044683 Ga0466965_0337158 Ga0466965_0337158_232_624 130
87 3300044684 Ga0466966_0141786 Ga0466966_0141786_1028_1423 130
88 3300044693 Ga0466961_0123944 Ga0466961_0123944_541_936 130
89 3300045049 Ga0466959_0222048 Ga0466959_0222048_447_842 130
90 3300045836 Ga0466958_0051303 Ga0466958_0051303_199_594 130
91 3300045836 Ga0466958_0463732 Ga0466958_0463732_189_581 130
92 3300048918 Ga0496115_0000077 Ga0496115_0000077_76398_76790 130
93 3300048928 Ga0496125_0303042 Ga0496125_0303042_96_488 130
94 3300048929 Ga0496126_0000047 Ga0496126_0000047_217792_218184 130
95 3300049586 Ga0501070_0006212 Ga0501070_0006212_5665_6057 130
96 3300049589 Ga0501073_0108007 Ga0501073_0108007_216_608 130
97 3300049741 Ga0501079_0767165 Ga0501079_0767165_41_433 130
98 3300049742 Ga0501080_0014890 Ga0501080_0014890_4535_4927 130
99 3300049822 Ga0501035_0619703 Ga0501035_0619703_70_462 130
100 3300005327 Ga0070658_10095451 Ga0070658_100954512 131
101 3300005327 Ga0070658_10487332 Ga0070658_104873321 131
102 3300005436 Ga0070713_100000008 Ga0070713_10000000884 131
103 3300005437 Ga0070710_10082964 Ga0070710_100829642 131
104 3300005440 Ga0070705_100265853 Ga0070705_1002658532 131
105 3300005440 Ga0070705_100377007 Ga0070705_1003770072 131
106 3300005445 Ga0070708_100341547 Ga0070708_1003415472 131
107 3300005455 Ga0070663_101228772 Ga0070663_1012287721 131
108 3300005458 Ga0070681_10161235 Ga0070681_101612352 131
109 3300005539 Ga0068853_100007225 Ga0068853_1000072256 131
110 3300005549 Ga0070704_100192127 Ga0070704_1001921272 131
111 3300005563 Ga0068855_100115703 Ga0068855_1001157032 131
112 3300005563 Ga0068855_100333496 Ga0068855_1003334963 131
113 3300005564 Ga0070664_102042895 Ga0070664_1020428951 131
114 3300005577 Ga0068857_100032889 Ga0068857_1000328895 131
115 3300005614 Ga0068856_100000572 Ga0068856_1000005724 131
116 3300005616 Ga0068852_100092199 Ga0068852_1000921993 131
117 3300005616 Ga0068852_101386295 Ga0068852_1013862951 131
118 3300005618 Ga0068864_100531312 Ga0068864_1005313121 131
119 3300005841 Ga0068863_100685347 Ga0068863_1006853472 131
120 3300006175 Ga0070712_100045730 Ga0070712_1000457302 131
121 3300006237 Ga0097621_100072034 Ga0097621_1000720341 131
122 3300006358 Ga0068871_100100872 Ga0068871_1001008723 131
123 3300006871 Ga0075434_100117451 Ga0075434_1001174512 131
124 3300006914 Ga0075436_100000053 Ga0075436_10000005311 131
125 3300007076 Ga0075435_100373070 Ga0075435_1003730701 131
126 3300009093 Ga0105240_10603179 Ga0105240_106031792 131
127 3300009174 Ga0105241_11487937 Ga0105241_114879371 131
128 3300009177 Ga0105248_10617672 Ga0105248_106176721 131
129 3300009545 Ga0105237_10012751 Ga0105237_100127516 131
130 3300009551 Ga0105238_10005451 Ga0105238_100054517 131
131 3300009551 Ga0105238_11906373 Ga0105238_119063731 131
132 3300009979 Ga0105032_102300 Ga0105032_1023002 131
133 3300010375 Ga0105239_10035123 Ga0105239_100351235 131
134 3300011119 Ga0105246_10538827 Ga0105246_105388272 131
135 3300013297 Ga0157378_10069929 Ga0157378_100699294 131
136 3300013306 Ga0163162_11495267 Ga0163162_114952672 131
137 3300013307 Ga0157372_11024932 Ga0157372_110249322 131
138 3300013307 Ga0157372_13074688 Ga0157372_130746881 131
139 3300014326 Ga0157380_10398269 Ga0157380_103982692 131
140 3300015261 Ga0182006_1279005 Ga0182006_12790052 131
141 3300025898 Ga0207692_10059517 Ga0207692_100595172 131
142 3300025906 Ga0207699_10000115 Ga0207699_1000011549 131
143 3300025912 Ga0207707_10119649 Ga0207707_101196493 131
144 3300025914 Ga0207671_10026368 Ga0207671_100263685 131
145 3300025915 Ga0207693_10000149 Ga0207693_1000014915 131
146 3300025921 Ga0207652_10297017 Ga0207652_102970172 131
147 3300025924 Ga0207694_10014222 Ga0207694_100142224 131
148 3300025924 Ga0207694_10492821 Ga0207694_104928212 131
149 3300025928 Ga0207700_10000011 Ga0207700_1000001126 131
150 3300025939 Ga0207665_10031940 Ga0207665_100319404 131
151 3300025941 Ga0207711_10466747 Ga0207711_104667472 131
152 3300025949 Ga0207667_10272552 Ga0207667_102725522 131
153 3300026041 Ga0207639_10003520 Ga0207639_100035205 131
154 3300026067 Ga0207678_11092243 Ga0207678_110922432 131
155 3300026078 Ga0207702_10000162 Ga0207702_1000016257 131
156 3300026116 Ga0207674_10016780 Ga0207674_100167806 131
157 3300036401 Ga0373937_0243296 Ga0373937_0243296_720_1127 131
158 3300041486 Ga0451807_1829570 Ga0451807_1829570_1100_1495 131
159 3300041494 Ga0451837_0089327 Ga0451837_0089327_467_862 131
160 3300041509 Ga0451843_0185821 Ga0451843_0185821_375_773 131
161 3300042007 Ga0439449_0023987 Ga0439449_0023987_1651_2049 131
162 3300045051 Ga0451576_0172625 Ga0451576_0172625_1468_1881 131
163 3300045976 Ga0466967_1166010 Ga0466967_1166010_328_747 131
164 3300045976 Ga0466967_1253021 Ga0466967_1253021_38_511 131
165 3300046615 Ga0495656_0116426 Ga0495656_0116426_196_600 131
166 3300046616 Ga0495668_0053998 Ga0495668_0053998_526_930 131
167 3300046691 Ga0495670_0103574 Ga0495670_0103574_208_618 131
168 3300047318 Ga0495636_0194379 Ga0495636_0194379_34_444 131
169 3300048905 Ga0496102_0976808 Ga0496102_0976808_131_538 131
170 3300049523 Ga0501300_076250 Ga0501300_076250_90_497 131
171 3300049762 Ga0501265_005763 Ga0501265_005763_44_451 131
172 3300049772 Ga0501275_001008 Ga0501275_001008_357_764 131
173 3300050512 nmdc:mga0n895_121742_c1 nmdc:mga0n895_121742_c1_849_1256 131
174 3300050513 nmdc:mga0rr50_381195_c1 nmdc:mga0rr50_381195_c1_757_1164 131
175 3300050514 nmdc:mga08x19_82_c1 nmdc:mga08x19_82_c1_59710_60117 131
176 3300003214 JGI25165J46597_1015960 JGI25165J46597_10159602 132
177 3300005365 Ga0070688_100074578 Ga0070688_1000745782 132
178 3300005455 Ga0070663_100021096 Ga0070663_1000210964 132
179 3300005466 Ga0070685_10000363 Ga0070685_100003636 132
180 3300005563 Ga0068855_100597711 Ga0068855_1005977112 132
181 3300005614 Ga0068856_100998842 Ga0068856_1009988422 132
182 3300005616 Ga0068852_100132982 Ga0068852_1001329823 132
183 3300005617 Ga0068859_100640740 Ga0068859_1006407402 132
184 3300006173 Ga0070716_101048675 Ga0070716_1010486752 132
185 3300006847 Ga0075431_100160018 Ga0075431_1001600182 132
186 3300006881 Ga0068865_100001448 Ga0068865_1000014486 132
187 3300006931 Ga0097620_100640781 Ga0097620_1006407812 132
188 3300009093 Ga0105240_10004822 Ga0105240_1000482213 132
189 3300009098 Ga0105245_11190959 Ga0105245_111909592 132
190 3300009098 Ga0105245_12686783 Ga0105245_126867831 132
191 3300009551 Ga0105238_10002595 Ga0105238_100025954 132
192 3300013306 Ga0163162_10054320 Ga0163162_100543202 132
193 3300013308 Ga0157375_10000953 Ga0157375_1000095313 132
194 3300014325 Ga0163163_12377231 Ga0163163_123772311 132
195 3300014969 Ga0157376_10769618 Ga0157376_107696182 132
196 3300025261 Ga0209233_1002716 Ga0209233_10027165 132
197 3300025913 Ga0207695_10000651 Ga0207695_1000065156 132
198 3300025914 Ga0207671_10268848 Ga0207671_102688482 132
199 3300025924 Ga0207694_10000204 Ga0207694_1000020419 132
200 3300025927 Ga0207687_11182614 Ga0207687_111826142 132
201 3300025949 Ga0207667_10513135 Ga0207667_105131352 132
202 3300026035 Ga0207703_10545907 Ga0207703_105459072 132
203 3300026067 Ga0207678_10074417 Ga0207678_100744173 132
204 3300026078 Ga0207702_10888184 Ga0207702_108881842 132
205 3300026142 Ga0207698_10152174 Ga0207698_101521743 132
206 3300028379 Ga0268266_11540913 Ga0268266_115409131 132
207 3300047317 Ga0495604_0689282 Ga0495604_0689282_211_615 132
208 3300048920 Ga0496117_0073061 Ga0496117_0073061_1060_1458 132
209 3300048921 Ga0496118_0004200 Ga0496118_0004200_13765_14163 132
210 3300048929 Ga0496126_0215721 Ga0496126_0215721_688_1086 132
211 3300049571 Ga0501034_0000487 Ga0501034_0000487_57209_57622 132
212 3300049588 Ga0501072_0030943 Ga0501072_0030943_2273_2686 132
213 3300049590 Ga0501074_0105335 Ga0501074_0105335_720_1133 132
214 3300050508 nmdc:mga09592_409715_c1 nmdc:mga09592_409715_c1_532_933 132
215 3300050510 nmdc:mga06r32_181401_c1 nmdc:mga06r32_181401_c1_315_716 132

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04828

GFA

Glutathione-dependent formaldehyde-activating enzyme

25

118

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3fac-assembly8.cif.gz_H crystal structure of rhodobacter sphaeroides protein rsp_2168. northeast structural genomics target rhr83. 0.8323 8 109
8ajq-assembly3.cif.gz_E crystal structure of pa2722 from pseudomonas aeruginosa pao1 0.7857 3 101
3fac-assembly8.cif.gz_H crystal structure of rhodobacter sphaeroides protein rsp_2168. northeast structural genomics target rhr83. 0.7837 8 109
3f42-assembly1.cif.gz_A-2 crystal structure of uncharacterized protein hp0035 from helicobacter pylori 0.5737 58 98
1xa8-assembly1.cif.gz_A crystal structure analysis of glutathione-dependent formaldehyde-activating enzyme (gfa) 0.5662 4 132
ID Description Score Start End Superfamily
af_K7MPT9_9_124_2.170.150.70 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A; 0.9449 9 121 2.170.150.70
af_A0A1D6EPM0_14_114_2.170.150.70 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A; 0.9307 7 102 2.170.150.70
af_K7MPT9_9_124_2.170.150.70 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A; 0.914 9 121 2.170.150.70
af_A0A1D6EPM0_14_114_2.170.150.70 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A; 0.8784 7 102 2.170.150.70
af_Q54VC9_11_133_2.170.150.70 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A; 0.8376 9 116 2.170.150.70
ID Description Score Start End GO Terms
AF-A0A382CKB3-F1-model_v4 CENP-V/GFA domain-containing protein 0.9865 41 99 GO:0016846
GO:0046872
AF-A0A1I7XFI6-F1-model_v4 CENP-V/GFA domain-containing protein 0.9833 1 57 GO:0016846
GO:0046872
AF-A0A411HQH1-F1-model_v4 GFA family protein 0.9814 5 131 GO:0016846
GO:0046872
AF-A0A534H5X5-F1-model_v4 GFA family protein 0.9809 2 114 GO:0016846
GO:0046872
AF-T0YKH6-F1-model_v4 Glutathione-dependent formaldehyde-activating, GFA 0.9769 17 131 GO:0016846
GO:0046872

Feature Viewer

pLDDT pTM Quality
93.28 0.87 High
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Predicted Structure (AlphaFold2)

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