F326733

General Info

Members Datasets Scaffolds Average Seq Length
215 139 193 361

Family's Representative Sequence

Representative Sequence 3300042007|Ga0439449_0004729|Ga0439449_0004729_2011_3204
Length 397
Sequence MNARADAPDSGFAAARRQHATTAPRARIALLGTGTVGRAVLERLASWEGAAFGGTLQLVHVGNSRIAVSDAEGLCVRQAALVLGASRMSESALHAAAHGRRLSPMPSELAVVTSALGRQGCRIVVDATASEAVAEQHARWLASGVHVVTACKLGQGTSLARWRVIREAVESGAHYGDSATVGAGLPLLRSVRELLAGGDRIHGIAGILSGSLAWLFNQYDGMRPFSSLVRQARDAGYTEPDPRDDLSGEDVRRKTVILARTAGFEIEPCDVEVASLVPRELALLSKDAVDAALPALDEPLRRRFADAYKKGEKLRFVARLEREDGKCHARVGLEALPADHPLAAGAGTDNKVAIWSDRYRTQPLVIQGPGAGAEVTAAGLLDDVLRCAGASAYRERT

Samples

Sample ID Description Type Environment
1 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
2 2643221559 Lysobacter sp. Root559 Isolate Unclassified
3 2643221573 Lysobacter sp. Root604 Isolate Unclassified
4 2643221586 Lysobacter sp. Root667 Isolate Unclassified
5 2643221593 Lysobacter sp. Root690 Isolate Unclassified
6 2643221612 Lysobacter sp. Root76 Isolate Unclassified
7 2643221695 Lysobacter sp. Root494 Isolate Unclassified
8 2643221720 Lysobacter sp. Root916 Isolate Unclassified
9 2643221727 Lysobacter sp. Root96 Isolate Unclassified
10 2643221728 Lysobacter sp. Root983 Isolate Unclassified
11 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
12 2818991457 Xanthomonas translucens 569 Isolate Unclassified
13 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
14 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
15 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
16 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
17 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
18 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
19 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
20 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
21 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
22 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
23 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
24 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
25 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
26 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
27 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
28 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
29 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
30 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
31 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
32 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
33 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
34 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
35 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
48 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
49 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
50 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
51 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
56 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
58 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
71 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
72 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
73 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
74 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
75 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
76 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
79 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
83 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
84 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
85 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
86 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
87 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
90 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
91 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
92 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
93 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
94 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
95 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
96 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
97 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
98 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
99 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
100 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
101 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
102 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
103 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
104 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
109 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
110 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
111 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
112 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
113 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
114 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
115 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
116 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
117 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
118 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
119 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
132 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
136 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
137 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
138 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
139 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.77
Metatranscriptomes 0
Isolates 10.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.47
Nodule 0
Rhizoplane 3.72
Rhizosphere 63.72
Stem 0
Stem Tuber 0
Unclassified 12.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000061 3300002773 Bacteria 73011
2 JGI25152J39213_1000126 3300002773 Bacteria 52109
3 JGI25150J39212_1000873 3300002774 Bacteria 9971
4 JGI25151J46595_10000177 3300003187 Bacteria 81432
5 JGI25151J46595_10000708 3300003187 Bacteria 27944
6 JGI25153J46596_10000130 3300003215 Bacteria 81432
7 rootL2_10033663 3300003322 Bacteria 1766
8 Ga0055526_1000034 3300003771 Bacteria 136991
9 Ga0055537_1000293 3300003773 Bacteria 35432
10 Ga0055524_1000060 3300003775 Bacteria 136991
11 Ga0055524_1010988 3300003775 Bacteria 3565
12 Ga0055524_1011091 3300003775 Bacteria 3543
13 Ga0055534_1000021 3300003784 Bacteria 137167
14 Ga0055528_1000022 3300003790 Bacteria 137042
15 Ga0055530_10001236 3300003791 Bacteria 19505
16 Ga0055531_10007210 3300003794 Bacteria 6115
17 Ga0055531_10014884 3300003794 Bacteria 3473
18 Ga0058692_1000015 3300003856 Bacteria 295729
19 Ga0070670_100010657 3300005331 Bacteria 7853
20 Ga0070670_100108745 3300005331 Bacteria 2389
21 Ga0070670_100109703 3300005331 Bacteria 2378
22 Ga0070670_100367495 3300005331 Bacteria 1266
23 Ga0070668_100006579 3300005347 Bacteria 8608
24 Ga0070671_100172466 3300005355 Bacteria 1830
25 Ga0070674_100082734 3300005356 Bacteria 2297
26 Ga0070672_100003115 3300005543 Bacteria 10701
27 Ga0070672_100007081 3300005543 Bacteria 7586
28 Ga0068864_100227747 3300005618 Bacteria 1722
29 Ga0105251_10000536 3300009011 Bacteria 35805
30 Ga0105240_10009087 3300009093 Bacteria 14109
31 Ga0105245_10067875 3300009098 Bacteria 3230
32 Ga0105248_10051920 3300009177 Bacteria 4601
33 Ga0105032_100118 3300009979 Bacteria 8197
34 Ga0105239_10125968 3300010375 Bacteria 2847
35 Ga0157374_10034540 3300013296 Bacteria 4620
36 Ga0157375_10002283 3300013308 Bacteria 16584
37 Ga0157375_10167064 3300013308 Bacteria 2346
38 Ga0157380_10003699 3300014326 Bacteria 10519
39 Ga0182005_1002772 3300015265 Bacteria 6110
40 Ga0183360_10001 3300015689 Bacteria 3943671
41 Ga0207425_1000066 3300025245 Bacteria 125463
42 Ga0209129_1000135 3300025258 Bacteria 125520
43 Ga0209565_1000034 3300025263 Bacteria 312950
44 Ga0209673_1000039 3300025273 Bacteria 312950
45 Ga0209673_1004532 3300025273 Bacteria 7393
46 Ga0209673_1045058 3300025273 Bacteria 1215
47 Ga0209675_1000023 3300025291 Bacteria 312950
48 Ga0209675_1011507 3300025291 Bacteria 2928
49 Ga0209676_1001374 3300025292 Bacteria 23748
50 Ga0209676_1003464 3300025292 Bacteria 9690
51 Ga0209676_1003949 3300025292 Bacteria 8577
52 Ga0209676_1009356 3300025292 Bacteria 4235
53 Ga0209025_1000013 3300025294 Bacteria 871757
54 Ga0209025_1000023 3300025294 Bacteria 541307
55 Ga0209025_1005444 3300025294 Bacteria 10387
56 Ga0209025_1045419 3300025294 Bacteria 1821
57 Ga0209564_1000066 3300025295 Bacteria 312899
58 Ga0209564_1023841 3300025295 Bacteria 2110
59 Ga0209758_1000014 3300025297 Bacteria 871757
60 Ga0209758_1013466 3300025297 Bacteria 4454
61 Ga0209050_1000652 3300025298 Bacteria 53645
62 Ga0209256_1000048 3300025299 Bacteria 312899
63 Ga0209256_1004011 3300025299 Bacteria 9630
64 Ga0209256_1006456 3300025299 Bacteria 6193
65 Ga0209256_1014102 3300025299 Bacteria 2908
66 Ga0209257_1001359 3300025304 Bacteria 29586
67 Ga0209257_1001512 3300025304 Bacteria 27306
68 Ga0209257_1001632 3300025304 Bacteria 25694
69 Ga0207713_1000324 3300025735 Bacteria 53955
70 Ga0207695_10017025 3300025913 Bacteria 8476
71 Ga0207650_10002763 3300025925 Bacteria 12119
72 Ga0207650_10095464 3300025925 Bacteria 2279
73 Ga0207650_10193587 3300025925 Bacteria 1626
74 Ga0207669_10003973 3300025937 Bacteria 6459
75 Ga0207691_10002976 3300025940 Bacteria 16541
76 Ga0207691_10006508 3300025940 Bacteria 11272
77 Ga0207711_10012172 3300025941 Bacteria 7152
78 Ga0207689_10059949 3300025942 Bacteria 3129
79 Ga0209371_1000011 3300027312 Bacteria 848456
80 Ga0209983_1001447 3300027665 Bacteria 5277
81 Ga0268256_1000011 3300030500 Bacteria 848625
82 Ga0316177_1063774 3300030731 Bacteria 3943
83 Ga0316178_1012753 3300030735 Bacteria 1520
84 Ga0307408_100230402 3300031548 Bacteria 1517
85 Ga0307405_10050302 3300031731 Bacteria 2580
86 Ga0307405_10245017 3300031731 Bacteria 1330
87 Ga0307413_10000518 3300031824 Bacteria 12731
88 Ga0307413_10005433 3300031824 Bacteria 5691
89 Ga0307413_10024012 3300031824 Bacteria 3315
90 Ga0307413_10224478 3300031824 Bacteria 1374
91 Ga0307410_10015562 3300031852 Bacteria 4515
92 Ga0307410_10018480 3300031852 Bacteria 4213
93 Ga0307410_10031355 3300031852 Bacteria 3410
94 Ga0307406_10016139 3300031901 Bacteria 4334
95 Ga0307406_10121191 3300031901 Bacteria 1819
96 Ga0307407_10010446 3300031903 Bacteria 4379
97 Ga0307412_10007726 3300031911 Bacteria 6113
98 Ga0307412_10026160 3300031911 Bacteria 3624
99 Ga0307412_10088202 3300031911 Bacteria 2163
100 Ga0307409_100021952 3300031995 Bacteria 4390
101 Ga0307409_100266004 3300031995 Bacteria 1576
102 Ga0307416_100072542 3300032002 Bacteria 2866
103 Ga0307416_100312801 3300032002 Bacteria 1568
104 Ga0307414_10006547 3300032004 Bacteria 6500
105 Ga0307414_10014055 3300032004 Bacteria 4785
106 Ga0307414_10037340 3300032004 Bacteria 3251
107 Ga0307414_10053288 3300032004 Bacteria 2820
108 Ga0307414_10058118 3300032004 Bacteria 2723
109 Ga0307414_10083165 3300032004 Bacteria 2350
110 Ga0307414_10118380 3300032004 Bacteria 2031
111 Ga0307414_10130310 3300032004 Bacteria 1951
112 Ga0307414_10195209 3300032004 Bacteria 1641
113 Ga0307414_10245676 3300032004 Bacteria 1484
114 Ga0307414_10260333 3300032004 Bacteria 1447
115 Ga0307411_10006499 3300032005 Bacteria 5856
116 Ga0307411_10060452 3300032005 Bacteria 2516
117 Ga0307411_10236464 3300032005 Bacteria 1427
118 Ga0307415_100043715 3300032126 Bacteria 2991
119 Ga0395900_0003713 3300037418 Bacteria 16407
120 Ga0395900_0035976 3300037418 Bacteria 5103
121 Ga0395898_0364306 3300037466 Bacteria 1378
122 Ga0395905_0001056 3300037471 Bacteria 34822
123 Ga0395905_0005205 3300037471 Bacteria 13314
124 Ga0395905_0028716 3300037471 Bacteria 5242
125 Ga0395905_0200074 3300037471 Bacteria 1873
126 Ga0395901_0000232 3300038443 Bacteria 69963
127 Ga0395901_0065320 3300038443 Bacteria 3788
128 Ga0237819_00101 3300038705 Bacteria 31409
129 Ga0237816_00067 3300039145 Bacteria 7175
130 Ga0439436_0003725 3300041404 Bacteria 4652
131 Ga0439436_0028940 3300041404 Bacteria 1615
132 Ga0439447_004612 3300041407 Bacteria 4699
133 Ga0439465_0028896 3300041413 Bacteria 1760
134 Ga0439445_0016671 3300042004 Bacteria 1809
135 Ga0439445_0045330 3300042004 Bacteria 1176
136 Ga0439432_000250 3300042006 Bacteria 19343
137 Ga0439432_012997 3300042006 Bacteria 2836
138 Ga0439432_052759 3300042006 Bacteria 1266
139 Ga0439449_0004729 3300042007 Bacteria 5254
140 Ga0451577_0004868 3300042876 Bacteria 13994
141 Ga0495616_0015295 3300046513 Bacteria 4268
142 Ga0495598_0012478 3300046537 Bacteria 2087
143 Ga0495609_0073842 3300046538 Bacteria 1496
144 Ga0495656_0002226 3300046615 Bacteria 6411
145 Ga0495656_0012407 3300046615 Bacteria 3144
146 Ga0495668_0003482 3300046616 Bacteria 11751
147 Ga0495668_0044965 3300046616 Bacteria 2454
148 Ga0495636_0000118 3300047318 Bacteria 32623
149 Ga0495636_0014029 3300047318 Bacteria 3184
150 Ga0495615_0024525 3300048090 Bacteria 1392
151 Ga0496106_0180077 3300048909 Bacteria 1678
152 Ga0496108_0023332 3300048911 Bacteria 5089
153 Ga0496109_0040236 3300048912 Bacteria 4233
154 Ga0496109_0058854 3300048912 Bacteria 3510
155 Ga0496109_0206415 3300048912 Bacteria 1847
156 Ga0496110_0242934 3300048913 Bacteria 1638
157 Ga0496111_0098627 3300048914 Bacteria 2145
158 Ga0496111_0146556 3300048914 Bacteria 1750
159 Ga0496117_0002814 3300048920 Bacteria 21184
160 Ga0496118_0075080 3300048921 Bacteria 2413
161 Ga0496118_0086675 3300048921 Bacteria 2175
162 Ga0496119_0001305 3300048922 Bacteria 30794
163 Ga0496120_0000561 3300048923 Bacteria 56621
164 Ga0496121_0000961 3300048924 Bacteria 52030
165 Ga0496122_0000874 3300048925 Bacteria 56703
166 Ga0496123_0000461 3300048926 Bacteria 71380
167 Ga0496124_0006603 3300048927 Bacteria 12595
168 Ga0496126_0030393 3300048929 Bacteria 5118
169 Ga0501031_0024028 3300049568 Bacteria 3974
170 Ga0501032_0017812 3300049569 Bacteria 4985
171 Ga0501032_0084146 3300049569 Bacteria 2115
172 Ga0501033_0004611 3300049570 Bacteria 11035
173 Ga0501033_0141218 3300049570 Bacteria 1741
174 Ga0501033_0208423 3300049570 Bacteria 1394
175 Ga0501034_0012596 3300049571 Bacteria 8729
176 Ga0501034_0032669 3300049571 Bacteria 5285
177 Ga0501034_0039096 3300049571 Bacteria 4805
178 Ga0501036_0030248 3300049572 Bacteria 4576
179 Ga0501037_0083264 3300049573 Bacteria 2317
180 Ga0501038_0022412 3300049574 Bacteria 5660
181 Ga0501038_0027851 3300049574 Bacteria 5021
182 Ga0501043_0002609 3300049579 Bacteria 15203
183 Ga0501043_0055956 3300049579 Bacteria 3099
184 Ga0501047_0012859 3300049581 Bacteria 7931
185 Ga0501070_0083433 3300049586 Bacteria 2645
186 Ga0501073_0030419 3300049589 Bacteria 3855
187 Ga0501080_0027306 3300049742 Bacteria 5308
188 Ga0501266_010337 3300049763 Bacteria 1187
189 Ga0501275_002268 3300049772 Bacteria 1774
190 Ga0501035_0019771 3300049822 Bacteria 6186
191 Ga0501035_0032648 3300049822 Bacteria 4735
192 Ga0501044_0006843 3300049823 Bacteria 12563
193 Ga0501045_0037130 3300049824 Bacteria 3541

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048090 Ga0495615_0024525 Ga0495615_0024525_202_1254 292
2 3300049763 Ga0501266_010337 Ga0501266_010337_141_1103 295
3 3300025913 Ga0207695_10017025 Ga0207695_100170254 296
4 3300049570 Ga0501033_0208423 Ga0501033_0208423_157_1224 300
5 3300049571 Ga0501034_0032669 Ga0501034_0032669_3111_4178 300
6 3300049572 Ga0501036_0030248 Ga0501036_0030248_2488_3555 300
7 3300049574 Ga0501038_0027851 Ga0501038_0027851_3678_4745 300
8 3300049579 Ga0501043_0055956 Ga0501043_0055956_259_1326 300
9 3300049822 Ga0501035_0032648 Ga0501035_0032648_308_1375 300
10 3300048909 Ga0496106_0180077 Ga0496106_0180077_230_1273 301
11 3300048912 Ga0496109_0206415 Ga0496109_0206415_760_1791 303
12 3300048914 Ga0496111_0146556 Ga0496111_0146556_134_1165 303
13 3300005618 Ga0068864_100227747 Ga0068864_1002277472 307
14 3300046615 Ga0495656_0002226 Ga0495656_0002226_1323_2363 307
15 3300048911 Ga0496108_0023332 Ga0496108_0023332_2617_3660 307
16 3300048912 Ga0496109_0040236 Ga0496109_0040236_2266_3309 307
17 3300048913 Ga0496110_0242934 Ga0496110_0242934_486_1529 307
18 3300048914 Ga0496111_0098627 Ga0496111_0098627_560_1603 307
19 3300005331 Ga0070670_100010657 Ga0070670_1000106575 310
20 3300025925 Ga0207650_10002763 Ga0207650_100027637 310
21 3300048927 Ga0496124_0006603 Ga0496124_0006603_7643_8734 310
22 3300037471 Ga0395905_0200074 Ga0395905_0200074_525_1556 311
23 3300048920 Ga0496117_0002814 Ga0496117_0002814_19740_20831 312
24 3300048922 Ga0496119_0001305 Ga0496119_0001305_21805_22896 312
25 3300048923 Ga0496120_0000561 Ga0496120_0000561_7693_8784 312
26 3300009011 Ga0105251_10000536 Ga0105251_1000053611 313
27 3300025735 Ga0207713_1000324 Ga0207713_100032411 313
28 3300032004 Ga0307414_10130310 Ga0307414_101303102 314
29 3300048925 Ga0496122_0000874 Ga0496122_0000874_7640_8731 314
30 3300048926 Ga0496123_0000461 Ga0496123_0000461_22347_23438 314
31 3300049569 Ga0501032_0084146 Ga0501032_0084146_1054_2097 319
32 3300032004 Ga0307414_10118380 Ga0307414_101183802 323
33 3300042004 Ga0439445_0045330 Ga0439445_0045330_173_1165 323
34 3300031824 Ga0307413_10005433 Ga0307413_100054334 325
35 3300031852 Ga0307410_10015562 Ga0307410_100155622 325
36 3300031903 Ga0307407_10010446 Ga0307407_100104462 325
37 3300042006 Ga0439432_052759 Ga0439432_052759_80_1156 325
38 3300049579 Ga0501043_0002609 Ga0501043_0002609_7123_8211 326
39 3300003856 Ga0058692_1000015 Ga0058692_1000015169 330
40 3300027312 Ga0209371_1000011 Ga0209371_1000011653 330
41 3300030500 Ga0268256_1000011 Ga0268256_1000011653 330
42 3300037418 Ga0395900_0035976 Ga0395900_0035976_2863_3978 331
43 3300009979 Ga0105032_100118 Ga0105032_1001183 334
44 3300038705 Ga0237819_00101 Ga0237819_00101_6601_7686 339
45 3300041404 Ga0439436_0003725 Ga0439436_0003725_580_1695 341
46 3300003771 Ga0055526_1000034 Ga0055526_100003430 342
47 3300003773 Ga0055537_1000293 Ga0055537_100029317 342
48 3300003775 Ga0055524_1000060 Ga0055524_100006030 342
49 3300003784 Ga0055534_1000021 Ga0055534_100002130 342
50 3300003790 Ga0055528_1000022 Ga0055528_100002282 342
51 3300025263 Ga0209565_1000034 Ga0209565_100003430 342
52 3300025273 Ga0209673_1000039 Ga0209673_100003930 342
53 3300025291 Ga0209675_1000023 Ga0209675_100002330 342
54 3300025295 Ga0209564_1000066 Ga0209564_1000066243 342
55 3300025299 Ga0209256_1000048 Ga0209256_100004830 342
56 3300031731 Ga0307405_10050302 Ga0307405_100503022 343
57 3300031824 Ga0307413_10024012 Ga0307413_100240123 343
58 3300031824 Ga0307413_10224478 Ga0307413_102244781 343
59 3300031852 Ga0307410_10031355 Ga0307410_100313552 343
60 3300031901 Ga0307406_10121191 Ga0307406_101211912 343
61 3300031911 Ga0307412_10007726 Ga0307412_100077263 343
62 3300031911 Ga0307412_10088202 Ga0307412_100882021 343
63 3300031995 Ga0307409_100021952 Ga0307409_1000219523 343
64 3300031995 Ga0307409_100266004 Ga0307409_1002660042 343
65 3300032002 Ga0307416_100072542 Ga0307416_1000725422 343
66 3300032004 Ga0307414_10006547 Ga0307414_100065474 343
67 3300032004 Ga0307414_10053288 Ga0307414_100532883 343
68 3300032004 Ga0307414_10058118 Ga0307414_100581183 343
69 3300032004 Ga0307414_10083165 Ga0307414_100831652 343
70 3300032004 Ga0307414_10260333 Ga0307414_102603331 343
71 3300032005 Ga0307411_10006499 Ga0307411_100064996 343
72 3300032126 Ga0307415_100043715 Ga0307415_1000437152 343
73 3300037418 Ga0395900_0003713 Ga0395900_0003713_13993_15072 343
74 3300037466 Ga0395898_0364306 Ga0395898_0364306_239_1318 343
75 3300037471 Ga0395905_0005205 Ga0395905_0005205_9203_10282 343
76 3300037471 Ga0395905_0028716 Ga0395905_0028716_2455_3534 343
77 3300038443 Ga0395901_0000232 Ga0395901_0000232_41483_42562 343
78 3300046616 Ga0495668_0044965 Ga0495668_0044965_251_1330 343
79 iso_pu_bacteria 8003014200 8003016788 343
80 3300005331 Ga0070670_100108745 Ga0070670_1001087452 344
81 3300014326 Ga0157380_10003699 Ga0157380_100036992 344
82 3300025925 Ga0207650_10193587 Ga0207650_101935872 344
83 3300031548 Ga0307408_100230402 Ga0307408_1002304022 344
84 3300042004 Ga0439445_0016671 Ga0439445_0016671_157_1245 344
85 3300013296 Ga0157374_10034540 Ga0157374_100345403 345
86 3300025942 Ga0207689_10059949 Ga0207689_100599491 345
87 3300031731 Ga0307405_10245017 Ga0307405_102450172 345
88 3300031852 Ga0307410_10018480 Ga0307410_100184804 345
89 3300042876 Ga0451577_0004868 Ga0451577_0004868_4950_6044 345
90 3300009098 Ga0105245_10067875 Ga0105245_100678753 346
91 3300032004 Ga0307414_10014055 Ga0307414_100140553 346
92 3300032005 Ga0307411_10236464 Ga0307411_102364642 346
93 iso_pu_bacteria 2643221573 2643881925 346
94 iso_pu_bacteria 2643221586 2643938694 346
95 iso_pu_bacteria 2643221593 2643978045 346
96 iso_pu_bacteria 2643221720 2644661584 346
97 iso_pu_bacteria 2643221728 2644701283 346
98 3300003322 rootL2_10033663 rootL2_100336632 347
99 3300003775 Ga0055524_1010988 Ga0055524_10109882 347
100 3300003775 Ga0055524_1011091 Ga0055524_10110912 347
101 3300003791 Ga0055530_10001236 Ga0055530_100012362 347
102 3300003794 Ga0055531_10007210 Ga0055531_100072104 347
103 3300003794 Ga0055531_10014884 Ga0055531_100148842 347
104 3300005543 Ga0070672_100007081 Ga0070672_1000070813 347
105 3300025273 Ga0209673_1004532 Ga0209673_10045325 347
106 3300025273 Ga0209673_1045058 Ga0209673_10450581 347
107 3300025291 Ga0209675_1011507 Ga0209675_10115072 347
108 3300025292 Ga0209676_1001374 Ga0209676_10013744 347
109 3300025292 Ga0209676_1003464 Ga0209676_10034647 347
110 3300025292 Ga0209676_1003949 Ga0209676_10039497 347
111 3300025292 Ga0209676_1009356 Ga0209676_10093562 347
112 3300025294 Ga0209025_1045419 Ga0209025_10454192 347
113 3300025295 Ga0209564_1023841 Ga0209564_10238412 347
114 3300025298 Ga0209050_1000652 Ga0209050_100065237 347
115 3300025299 Ga0209256_1004011 Ga0209256_10040112 347
116 3300025299 Ga0209256_1014102 Ga0209256_10141022 347
117 3300025304 Ga0209257_1001359 Ga0209257_100135918 347
118 3300025304 Ga0209257_1001512 Ga0209257_100151220 347
119 3300025304 Ga0209257_1001632 Ga0209257_100163220 347
120 3300025937 Ga0207669_10003973 Ga0207669_100039736 347
121 3300025940 Ga0207691_10002976 Ga0207691_100029767 347
122 3300041413 Ga0439465_0028896 Ga0439465_0028896_466_1554 347
123 3300046537 Ga0495598_0012478 Ga0495598_0012478_462_1556 347
124 3300048921 Ga0496118_0086675 Ga0496118_0086675_566_1654 347
125 3300049824 Ga0501045_0037130 Ga0501045_0037130_963_2057 347
126 iso_pu_bacteria 2643221559 2643816626 347
127 iso_pu_bacteria 2643221612 2644077562 347
128 iso_pu_bacteria 2643221727 2644694123 347
129 iso_pu_bacteria 2941489479 2941492745 347
130 3300025299 Ga0209256_1006456 Ga0209256_10064563 348
131 3300032002 Ga0307416_100312801 Ga0307416_1003128012 348
132 3300037471 Ga0395905_0001056 Ga0395905_0001056_7103_8269 348
133 3300038443 Ga0395901_0065320 Ga0395901_0065320_542_1708 348
134 3300049568 Ga0501031_0024028 Ga0501031_0024028_1263_2381 348
135 3300049569 Ga0501032_0017812 Ga0501032_0017812_1310_2428 348
136 3300049570 Ga0501033_0141218 Ga0501033_0141218_227_1345 348
137 3300049571 Ga0501034_0012596 Ga0501034_0012596_3002_4120 348
138 3300049571 Ga0501034_0039096 Ga0501034_0039096_2212_3330 348
139 3300049573 Ga0501037_0083264 Ga0501037_0083264_341_1459 348
140 3300049574 Ga0501038_0022412 Ga0501038_0022412_1562_2680 348
141 3300049581 Ga0501047_0012859 Ga0501047_0012859_2249_3367 348
142 3300049586 Ga0501070_0083433 Ga0501070_0083433_1189_2307 348
143 3300049589 Ga0501073_0030419 Ga0501073_0030419_1913_3031 348
144 3300049742 Ga0501080_0027306 Ga0501080_0027306_2769_3887 348
145 3300049822 Ga0501035_0019771 Ga0501035_0019771_4709_5827 348
146 3300049823 Ga0501044_0006843 Ga0501044_0006843_10347_11465 348
147 iso_pu_bacteria 2995948881 2995953002 348
148 3300025294 Ga0209025_1005444 Ga0209025_10054447 349
149 3300027665 Ga0209983_1001447 Ga0209983_10014473 349
150 3300042006 Ga0439432_000250 Ga0439432_000250_2040_3191 349
151 3300049570 Ga0501033_0004611 Ga0501033_0004611_3590_4726 349
152 3300003187 JGI25151J46595_10000708 JGI25151J46595_1000070810 350
153 3300025294 Ga0209025_1000023 Ga0209025_1000023180 350
154 3300025297 Ga0209758_1013466 Ga0209758_10134662 350
155 3300031901 Ga0307406_10016139 Ga0307406_100161392 350
156 3300041407 Ga0439447_004612 Ga0439447_004612_3169_4302 350
157 3300046616 Ga0495668_0003482 Ga0495668_0003482_6055_7188 350
158 3300015689 Ga0183360_10001 Ga0183360_10001214 351
159 3300048924 Ga0496121_0000961 Ga0496121_0000961_16075_17217 351
160 3300049772 Ga0501275_002268 Ga0501275_002268_495_1604 351
161 iso_pu_bacteria 2571042365 2572254659 351
162 3300009093 Ga0105240_10009087 Ga0105240_100090874 352
163 3300009177 Ga0105248_10051920 Ga0105248_100519204 352
164 3300010375 Ga0105239_10125968 Ga0105239_101259682 352
165 3300013308 Ga0157375_10002283 Ga0157375_100022832 352
166 3300025941 Ga0207711_10012172 Ga0207711_100121722 352
167 3300031824 Ga0307413_10000518 Ga0307413_100005183 352
168 3300032004 Ga0307414_10037340 Ga0307414_100373402 352
169 3300032004 Ga0307414_10195209 Ga0307414_101952092 352
170 3300032004 Ga0307414_10245676 Ga0307414_102456762 352
171 3300046513 Ga0495616_0015295 Ga0495616_0015295_2386_3471 352
172 iso_pu_bacteria 2643221695 2644529675 352
173 3300042007 Ga0439449_0004729 Ga0439449_0004729_2011_3204 353
174 3300046615 Ga0495656_0012407 Ga0495656_0012407_1671_2846 353
175 3300047318 Ga0495636_0000118 Ga0495636_0000118_3542_4717 353
176 3300047318 Ga0495636_0014029 Ga0495636_0014029_1161_2336 353
177 iso_pu_bacteria 2818991457 2819660753 353
178 iso_pu_bacteria 8021622325 8021623889 353
179 iso_pu_bacteria 8021626552 8021630111 353
180 iso_pu_bacteria 8021648035 8021648107 353
181 3300031911 Ga0307412_10026160 Ga0307412_100261602 354
182 3300032005 Ga0307411_10060452 Ga0307411_100604522 354
183 3300041404 Ga0439436_0028940 Ga0439436_0028940_237_1418 354
184 iso_pu_bacteria 2852684882 2852686621 354
185 iso_pu_bacteria 2919130084 2919132636 354
186 iso_pu_bacteria 2929195423 2929196806 354
187 3300005543 Ga0070672_100003115 Ga0070672_1000031155 355
188 3300025940 Ga0207691_10006508 Ga0207691_100065085 355
189 3300046538 Ga0495609_0073842 Ga0495609_0073842_330_1418 355
190 3300005331 Ga0070670_100109703 Ga0070670_1001097032 356
191 3300005331 Ga0070670_100367495 Ga0070670_1003674951 356
192 3300005355 Ga0070671_100172466 Ga0070671_1001724662 356
193 3300005356 Ga0070674_100082734 Ga0070674_1000827342 356
194 3300013308 Ga0157375_10167064 Ga0157375_101670642 356
195 3300025925 Ga0207650_10095464 Ga0207650_100954642 356
196 3300039145 Ga0237816_00067 Ga0237816_00067_5131_6201 356
197 iso_pu_bacteria 2747842501 2748019596 356
198 3300030731 Ga0316177_1063774 Ga0316177_10637742 357
199 3300030735 Ga0316178_1012753 Ga0316178_10127532 357
200 3300042006 Ga0439432_012997 Ga0439432_012997_1656_2765 357
201 3300048912 Ga0496109_0058854 Ga0496109_0058854_1659_2816 357
202 3300005347 Ga0070668_100006579 Ga0070668_1000065792 358
203 3300015265 Ga0182005_1002772 Ga0182005_10027723 358
204 3300048921 Ga0496118_0075080 Ga0496118_0075080_299_1387 358
205 3300048929 Ga0496126_0030393 Ga0496126_0030393_798_1886 358
206 iso_pu_bacteria 2894414249 2894417182 358
207 3300002773 JGI25152J39213_1000061 JGI25152J39213_10000618 361
208 3300002773 JGI25152J39213_1000126 JGI25152J39213_100012636 361
209 3300002774 JGI25150J39212_1000873 JGI25150J39212_10008738 361
210 3300003187 JGI25151J46595_10000177 JGI25151J46595_1000017755 361
211 3300003215 JGI25153J46596_10000130 JGI25153J46596_1000013010 361
212 3300025245 Ga0207425_1000066 Ga0207425_1000066103 361
213 3300025258 Ga0209129_1000135 Ga0209129_100013511 361
214 3300025294 Ga0209025_1000013 Ga0209025_1000013387 361
215 3300025297 Ga0209758_1000014 Ga0209758_1000014387 361

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00742

Homoserine_dh

Homoserine dehydrogenase

186

385

0.93

PF03447

NAD_binding_3

Homoserine dehydrogenase, NAD binding domain

32

175

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ebf-assembly1.cif.gz_B homoserine dehydrogenase from s. cerevisiae complex with nad+ 0.8659 17 356
3do5-assembly1.cif.gz_A-2 crystal structure of putative homoserine dehydrogenase (np_069768.1) from archaeoglobus fulgidus at 2.20 a resolution 0.8638 19 357
4ydr-assembly1.cif.gz_A crystal structure of oxidized homoserine dehydrogenase of sulfolobus tokodaii 0.857 20 356
7m92-assembly1.cif.gz_B crystal structure of unknown function protein protein b9j08_000055 candida auris 0.8566 19 355
3do5-assembly1.cif.gz_A-2 crystal structure of putative homoserine dehydrogenase (np_069768.1) from archaeoglobus fulgidus at 2.20 a resolution 0.8561 19 357
ID Description Score Start End Superfamily
af_A0A1D6Q023_181_351_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9487 170 336 3.30.360.10
af_Q3S3F6_184_338_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9461 172 320 3.30.360.10
af_A0A1D6Q023_181_351_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9221 170 336 3.30.360.10
af_Q3S3F6_184_338_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9052 172 320 3.30.360.10
3do5A02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.872 171 336 3.30.360.10
ID Description Score Start End GO Terms
AF-A0A109HD68-F1-model_v4 homoserine dehydrogenase (EC 1.1.1.3) 0.9808 93 355 GO:0004412
GO:0009086
GO:0009088
GO:0009090
GO:0050661
AF-A0A5C2ERI5-F1-model_v4 deleted 0.978 117 356
AF-A0A2X3KPK5-F1-model_v4 Bifunctional aspartokinase/homoserine dehydrogenase II] (EC 1.1.1.3) 0.9701 157 354 GO:0004412
GO:0009088
GO:0009090
GO:0016301
AF-A0A0U5I8H6-F1-model_v4 deleted 0.9701 225 355
AF-A0A524Q186-F1-model_v4 homoserine dehydrogenase (EC 1.1.1.3) 0.9692 112 355 GO:0004412
GO:0009088
GO:0009090
GO:0016301

Feature Viewer

pLDDT pTM Quality
89.22 0.86 High
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Predicted Structure (AlphaFold2)

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