F326752

General Info

Members Datasets Scaffolds Average Seq Length
215 141 205 562

Family's Representative Sequence

Representative Sequence 3300044706|Ga0466964_0011270|Ga0466964_0011270_408_2177
Length 589
Sequence VVPPSSTDGTSGSTDAVLDDRPVILLVSEEHSHYLLDEFGRYRRDYDLRTAQSAAGAGQVVKSLRGQQLALVVTESVLPDADVLATFHHLRSYVPTCRRVVAAHWDRFRLDAERFRPGLAKGKYDAYLLMPRGQRDEEFHTAICELLSDWNQTVAAPVVESLRVVSPTNDGLTLAVRDFLDRIGIPHLVHRPDSEVGREILARLDGPDHDRADHDGPGDAPGPAYPVVERWGGEPFSVTSVRDVAMSIYGRPDSIDVDRVADVVIVGAGPAGLATSVYAASEGLSTITLEAEAIGGQAGTSSMIRNYLGFPRGISGMRLAQRARNQAIRFGTQFFTGWPAVRLAVGGLGEPHLVCTDGGDVRAHAVVIASGVTYRRLGVESIDSMVGSGVNYGAAMTAAREMEGLDVYVVGGGNSAGQAAIHLSRFARSVTILVRRPDLRATMSSYLIGEIEFNPRITVEGCRHVVDGGGDGRLEWIEVEDSTTGRRTRREAGGLFLLLGAVAHCDWLPAEVARDPNGFVLTGRDVPSTAWRDGLPPENLETTVPGIFAVGDIRSGSMKRVASASGEGASVVPLVHAWLEPAPVVSEPV

Samples

Sample ID Description Type Environment
1 2643221615 Nocardioides sp. Root224 Isolate Unclassified
2 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
3 2643221711 Terrabacter sp. Root85 Isolate Unclassified
4 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
5 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
6 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
7 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
8 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
9 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
10 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
11 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
33 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
75 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
76 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
77 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
78 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
81 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
82 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
83 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
84 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
85 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
86 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
87 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
88 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
89 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
90 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
91 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
92 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
93 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
94 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
95 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
96 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
97 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
98 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
99 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
100 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
101 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
102 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
103 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
104 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
105 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
106 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
117 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
118 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
119 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
120 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
121 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
122 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
123 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
124 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
125 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
126 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
129 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
130 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
131 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
132 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
133 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
134 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
135 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
136 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
139 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
140 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.88
Metatranscriptomes 0.47
Isolates 4.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.88
Nodule 0
Rhizoplane 19.07
Rhizosphere 62.79
Stem 0
Stem Tuber 0
Unclassified 3.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24738J21930_10003088 3300002075 Bacteria 4258
2 Ga0070683_100021318 3300005329 Bacteria 5782
3 Ga0070680_100016984 3300005336 Bacteria 5731
4 Ga0068868_100013869 3300005338 Bacteria 5924
5 Ga0070660_100026232 3300005339 Bacteria 4336
6 Ga0070687_100005850 3300005343 Bacteria 5002
7 Ga0070661_100107580 3300005344 Bacteria 2080
8 Ga0070659_100053177 3300005366 Bacteria 3187
9 Ga0070667_100001478 3300005367 Bacteria 21095
10 Ga0070679_100044997 3300005530 Bacteria 4398
11 Ga0070684_100005162 3300005535 Bacteria 9983
12 Ga0070684_100006687 3300005535 Bacteria 8936
13 Ga0070684_100181342 3300005535 Bacteria 1915
14 Ga0070686_100013356 3300005544 Bacteria 4699
15 Ga0070665_100001086 3300005548 Bacteria 33826
16 Ga0068854_100018758 3300005578 Bacteria 4650
17 Ga0070702_100008423 3300005615 Bacteria 4994
18 Ga0068859_100001257 3300005617 Bacteria 25886
19 Ga0068861_100043012 3300005719 Bacteria 3388
20 Ga0068870_10005507 3300005840 Bacteria 5530
21 Ga0068858_100091579 3300005842 Bacteria 2830
22 Ga0068860_100000739 3300005843 Bacteria 37268
23 Ga0068860_100030455 3300005843 Bacteria 5190
24 Ga0075365_10005278 3300006038 Bacteria 6952
25 Ga0075365_10030875 3300006038 Bacteria 3436
26 Ga0075365_10044893 3300006038 Bacteria 2898
27 Ga0075365_10062514 3300006038 Bacteria 2490
28 Ga0075368_10006484 3300006042 Bacteria 4090
29 Ga0075363_100001299 3300006048 Bacteria 9316
30 Ga0075363_100032111 3300006048 Bacteria 2725
31 Ga0075363_100043483 3300006048 Bacteria 2377
32 Ga0075364_10011887 3300006051 Bacteria 5303
33 Ga0075364_10018555 3300006051 Bacteria 4356
34 Ga0075364_10020476 3300006051 Bacteria 4160
35 Ga0075364_10071580 3300006051 Bacteria 2284
36 Ga0075362_10000604 3300006177 Bacteria 10541
37 Ga0075367_10005907 3300006178 Bacteria 6139
38 Ga0075367_10007075 3300006178 Bacteria 5719
39 Ga0075367_10010428 3300006178 Bacteria 4883
40 Ga0068865_100022691 3300006881 Bacteria 4099
41 Ga0097620_100001257 3300006931 Bacteria 25886
42 Ga0111539_10067957 3300009094 Bacteria 4207
43 Ga0111539_10213236 3300009094 Bacteria 2250
44 Ga0105245_10004779 3300009098 Bacteria 11954
45 Ga0105245_10005667 3300009098 Bacteria 10974
46 Ga0105243_10022942 3300009148 Bacteria 4745
47 Ga0105248_10037743 3300009177 Bacteria 5406
48 Ga0105248_10065172 3300009177 Bacteria 4090
49 Ga0105239_10008873 3300010375 Bacteria 11379
50 Ga0105246_10003497 3300011119 Bacteria 9515
51 Ga0163162_10017454 3300013306 Bacteria 7022
52 Ga0157372_10012370 3300013307 Bacteria 9095
53 Ga0157372_10099390 3300013307 Bacteria 3319
54 Ga0163163_10024178 3300014325 Bacteria 5780
55 Ga0157380_10017181 3300014326 Bacteria 5350
56 Ga0157377_10003006 3300014745 Bacteria 7555
57 Ga0157379_10034169 3300014968 Bacteria 4532
58 Ga0163161_10025511 3300017792 Bacteria 4183
59 Ga0206353_11197756 3300020082 Bacteria 2403
60 Ga0207688_10004627 3300025901 Bacteria 7499
61 Ga0207647_10014830 3300025904 Bacteria 5360
62 Ga0207647_10045606 3300025904 Bacteria 2734
63 Ga0207705_10098058 3300025909 Bacteria 2153
64 Ga0207660_10052652 3300025917 Bacteria 2899
65 Ga0207657_10056041 3300025919 Bacteria 3402
66 Ga0207652_10067429 3300025921 Bacteria 3103
67 Ga0207690_10057357 3300025932 Bacteria 2631
68 Ga0207709_10016471 3300025935 Bacteria 4109
69 Ga0207669_10008443 3300025937 Bacteria 4837
70 Ga0207691_10017419 3300025940 Bacteria 6814
71 Ga0207661_10040198 3300025944 Bacteria 3675
72 Ga0207651_10038068 3300025960 Bacteria 3157
73 Ga0207712_10037758 3300025961 Bacteria 3297
74 Ga0207658_10007657 3300025986 Bacteria 7354
75 Ga0207708_10000410 3300026075 Bacteria 33781
76 Ga0207648_10011193 3300026089 Bacteria 8459
77 Ga0207675_100016874 3300026118 Bacteria 6822
78 Ga0207683_10096669 3300026121 Bacteria 2633
79 Ga0207698_10007219 3300026142 Bacteria 6959
80 Ga0268266_10003784 3300028379 Bacteria 14812
81 Ga0268264_10000959 3300028381 Bacteria 29676
82 Ga0307513_10002683 3300031456 Bacteria 24503
83 Ga0316579_10000979 3300031691 Bacteria 10005
84 Ga0316576_10032822 3300031727 Bacteria 3691
85 Ga0316578_10012443 3300031728 Bacteria 4487
86 Ga0316577_10013907 3300031733 Bacteria 4414
87 Ga0307409_100038796 3300031995 Bacteria 3527
88 Ga0307409_100114593 3300031995 Bacteria 2268
89 Ga0307409_100129303 3300031995 Bacteria 2155
90 Ga0316585_10009214 3300032137 Bacteria 2875
91 Ga0316574_0005818 3300035398 Bacteria 6614
92 Ga0316574_0033581 3300035398 Bacteria 3123
93 Ga0316582_0008885 3300036647 Bacteria 5423
94 Ga0316582_0025752 3300036647 Bacteria 3535
95 Ga0316584_0005384 3300036712 Bacteria 8585
96 Ga0316584_0086832 3300036712 Bacteria 2341
97 Ga0395905_0044448 3300037471 Bacteria 4170
98 Ga0395905_0118968 3300037471 Bacteria 2483
99 Ga0466972_0005101 3300044658 Bacteria 6578
100 Ga0466961_0076572 3300044693 Bacteria 2120
101 Ga0466964_0011270 3300044706 Bacteria 3377
102 Ga0466970_0003003 3300044765 Bacteria 8183
103 Ga0466970_0015910 3300044765 Bacteria 3873
104 Ga0466960_0005890 3300044901 Bacteria 4886
105 Ga0466967_0032124 3300045976 Bacteria 4428
106 Ga0466967_0050908 3300045976 Bacteria 3627
107 Ga0466967_0133618 3300045976 Bacteria 2306
108 Ga0495657_0040534 3300046675 Bacteria 3194
109 Ga0496100_0004850 3300048903 Bacteria 7183
110 Ga0496100_0013992 3300048903 Bacteria 4646
111 Ga0496101_0063714 3300048904 Bacteria 2684
112 Ga0496102_0000788 3300048905 Bacteria 30810
113 Ga0496102_0022734 3300048905 Bacteria 5557
114 Ga0496102_0185848 3300048905 Bacteria 1958
115 Ga0496102_0248580 3300048905 Bacteria 1677
116 Ga0496103_0000239 3300048906 Bacteria 53554
117 Ga0496104_0015691 3300048907 Bacteria 6870
118 Ga0496104_0035797 3300048907 Bacteria 4637
119 Ga0496104_0096606 3300048907 Bacteria 2827
120 Ga0496104_0163224 3300048907 Bacteria 2136
121 Ga0496104_0198889 3300048907 Bacteria 1916
122 Ga0496105_0010193 3300048908 Bacteria 7385
123 Ga0496105_0016262 3300048908 Bacteria 5937
124 Ga0496105_0031028 3300048908 Bacteria 4381
125 Ga0496105_0042918 3300048908 Bacteria 3729
126 Ga0496105_0044665 3300048908 Bacteria 3655
127 Ga0496107_0001474 3300048910 Bacteria 14556
128 Ga0496107_0054732 3300048910 Bacteria 2880
129 Ga0496107_0129692 3300048910 Bacteria 1861
130 Ga0496108_0105636 3300048911 Bacteria 2404
131 Ga0496108_0127190 3300048911 Bacteria 2188
132 Ga0496109_0011082 3300048912 Bacteria 7730
133 Ga0496109_0057651 3300048912 Bacteria 3546
134 Ga0496109_0063977 3300048912 Bacteria 3365
135 Ga0496109_0078197 3300048912 Bacteria 3045
136 Ga0496109_0079018 3300048912 Bacteria 3030
137 Ga0496110_0099841 3300048913 Bacteria 2602
138 Ga0496111_0004468 3300048914 Bacteria 8848
139 Ga0496111_0028695 3300048914 Bacteria 3944
140 Ga0496113_0010237 3300048916 Bacteria 6193
141 Ga0496114_0005041 3300048917 Bacteria 10302
142 Ga0496114_0007133 3300048917 Bacteria 8814
143 Ga0496114_0011042 3300048917 Bacteria 7204
144 Ga0496114_0033583 3300048917 Bacteria 4228
145 Ga0496114_0054231 3300048917 Bacteria 3343
146 Ga0496114_0055594 3300048917 Bacteria 3301
147 Ga0496114_0073086 3300048917 Bacteria 2885
148 Ga0496115_0002196 3300048918 Bacteria 13968
149 Ga0496115_0004804 3300048918 Bacteria 9803
150 Ga0501031_0002564 3300049568 Bacteria 11577
151 Ga0501033_0024506 3300049570 Bacteria 4551
152 Ga0501034_0011529 3300049571 Bacteria 9158
153 Ga0501034_0017387 3300049571 Bacteria 7376
154 Ga0501036_0003026 3300049572 Bacteria 13391
155 Ga0501037_0001631 3300049573 Bacteria 16300
156 Ga0501039_0003053 3300049575 Bacteria 12519
157 Ga0501039_0063530 3300049575 Bacteria 2861
158 Ga0501041_0046419 3300049577 Bacteria 2642
159 Ga0501043_0005525 3300049579 Bacteria 10205
160 Ga0501046_0004562 3300049580 Bacteria 12536
161 Ga0501048_0000335 3300049582 Bacteria 32394
162 Ga0501067_0001673 3300049583 Bacteria 12184
163 Ga0501067_0010489 3300049583 Bacteria 5130
164 Ga0501068_0009149 3300049584 Bacteria 5531
165 Ga0501068_0082036 3300049584 Bacteria 1980
166 Ga0501069_0046389 3300049585 Bacteria 2410
167 Ga0501070_0024700 3300049586 Bacteria 5039
168 Ga0501070_0052798 3300049586 Bacteria 3373
169 Ga0501070_0072464 3300049586 Bacteria 2851
170 Ga0501071_0039628 3300049587 Bacteria 3370
171 Ga0501071_0099994 3300049587 Bacteria 2137
172 Ga0501072_0033779 3300049588 Bacteria 4008
173 Ga0501072_0061910 3300049588 Bacteria 2952
174 Ga0501072_0147166 3300049588 Bacteria 1878
175 Ga0501073_0011300 3300049589 Bacteria 6532
176 Ga0501073_0017131 3300049589 Bacteria 5247
177 Ga0501073_0017280 3300049589 Bacteria 5225
178 Ga0501074_0014701 3300049590 Bacteria 5692
179 Ga0501076_0061390 3300049592 Bacteria 2991
180 Ga0501077_0073922 3300049593 Bacteria 2159
181 Ga0501079_0025916 3300049741 Bacteria 4498
182 Ga0501080_0001432 3300049742 Bacteria 20045
183 Ga0501080_0009010 3300049742 Bacteria 9080
184 Ga0501080_0022729 3300049742 Bacteria 5809
185 Ga0501083_0029639 3300049744 Bacteria 3761
186 Ga0501045_0060669 3300049824 Bacteria 2773
187 nmdc:mga03683_12986_c1 3300050489 Bacteria 3055
188 nmdc:mga03n38_16983_c1 3300050490 Bacteria 2842
189 nmdc:mga03n38_21982_c1 3300050490 Bacteria 2574
190 nmdc:mga03n38_36900_c1 3300050490 Bacteria 2104
191 nmdc:mga00v17_11791_c1 3300050491 Bacteria 4809
192 nmdc:mga00v17_20418_c1 3300050491 Bacteria 3794
193 nmdc:mga00v17_43695_c1 3300050491 Bacteria 2699
194 nmdc:mga0yw44_16004_c1 3300050492 Bacteria 4039
195 nmdc:mga06z11_12182_c1 3300050494 Bacteria 3733
196 nmdc:mga06z11_8305_c1 3300050494 Bacteria 4323
197 nmdc:mga04h51_3253_c1 3300050495 Bacteria 3929
198 nmdc:mga07m45_65868_c1 3300050496 Bacteria 2057
199 nmdc:mga07m45_8394_c1 3300050496 Bacteria 5307
200 nmdc:mga08y16_41002_c1 3300050511 Bacteria 4850
201 Ga0500644_0000338 3300053088 Bacteria 23746
202 Ga0500556_0001877 3300053104 Bacteria 7544
203 Ga0500593_000062 3300053117 Bacteria 39716
204 Ga0501082_0017092 3300060353 Bacteria 6250
205 Ga0501082_0045072 3300060353 Bacteria 3803

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049824 Ga0501045_0060669 Ga0501045_0060669_1324_2757 477
2 3300048912 Ga0496109_0011082 Ga0496109_0011082_3854_5326 490
3 3300048905 Ga0496102_0248580 Ga0496102_0248580_131_1648 505
4 3300049584 Ga0501068_0082036 Ga0501068_0082036_318_1934 538
5 3300044658 Ga0466972_0005101 Ga0466972_0005101_403_2157 539
6 3300006038 Ga0075365_10062514 Ga0075365_100625142 543
7 3300031995 Ga0307409_100129303 Ga0307409_1001293032 544
8 3300005336 Ga0070680_100016984 Ga0070680_1000169842 545
9 3300005339 Ga0070660_100026232 Ga0070660_1000262323 545
10 3300005530 Ga0070679_100044997 Ga0070679_1000449972 545
11 3300020082 Ga0206353_11197756 Ga0206353_111977561 545
12 3300025904 Ga0207647_10045606 Ga0207647_100456062 545
13 3300025909 Ga0207705_10098058 Ga0207705_100980582 545
14 3300025917 Ga0207660_10052652 Ga0207660_100526523 545
15 iso_pu_bacteria 2818991318 2819428520 545
16 3300048907 Ga0496104_0096606 Ga0496104_0096606_933_2582 549
17 3300048908 Ga0496105_0031028 Ga0496105_0031028_788_2437 549
18 3300049585 Ga0501069_0046389 Ga0501069_0046389_189_1880 550
19 iso_pu_bacteria 2643221711 2644608056 550
20 iso_pu_bacteria 2811994882 2812372975 550
21 iso_pu_bacteria 2818991458 2819664828 550
22 iso_pu_bacteria 2818991462 2819689515 550
23 iso_pu_bacteria 2818991469 2819726940 550
24 3300013307 Ga0157372_10099390 Ga0157372_100993902 551
25 3300048911 Ga0496108_0105636 Ga0496108_0105636_184_1839 551
26 3300048914 Ga0496111_0028695 Ga0496111_0028695_247_1902 551
27 3300048917 Ga0496114_0011042 Ga0496114_0011042_4477_6132 551
28 3300048917 Ga0496114_0054231 Ga0496114_0054231_297_1952 551
29 iso_pu_bacteria 2643221615 2644091123 551
30 iso_pu_bacteria 2643221657 2644320926 551
31 3300005329 Ga0070683_100021318 Ga0070683_1000213183 552
32 3300005344 Ga0070661_100107580 Ga0070661_1001075802 552
33 3300005535 Ga0070684_100181342 Ga0070684_1001813421 552
34 3300049571 Ga0501034_0017387 Ga0501034_0017387_3137_4795 552
35 3300049577 Ga0501041_0046419 Ga0501041_0046419_947_2605 552
36 3300049583 Ga0501067_0001673 Ga0501067_0001673_8647_10305 552
37 3300049584 Ga0501068_0009149 Ga0501068_0009149_1852_3510 552
38 3300049586 Ga0501070_0052798 Ga0501070_0052798_1688_3346 552
39 3300049587 Ga0501071_0039628 Ga0501071_0039628_1448_3106 552
40 3300049588 Ga0501072_0033779 Ga0501072_0033779_1873_3531 552
41 3300049588 Ga0501072_0061910 Ga0501072_0061910_520_2178 552
42 3300049589 Ga0501073_0017280 Ga0501073_0017280_1688_3346 552
43 3300049592 Ga0501076_0061390 Ga0501076_0061390_1064_2722 552
44 3300049741 Ga0501079_0025916 Ga0501079_0025916_1551_3209 552
45 3300049742 Ga0501080_0009010 Ga0501080_0009010_4580_6238 552
46 3300060353 Ga0501082_0017092 Ga0501082_0017092_750_2408 552
47 iso_pu_bacteria 2883821847 2883826554 552
48 3300009094 Ga0111539_10213236 Ga0111539_102132362 553
49 3300026121 Ga0207683_10096669 Ga0207683_100966692 553
50 3300031727 Ga0316576_10032822 Ga0316576_100328222 553
51 3300031728 Ga0316578_10012443 Ga0316578_100124433 553
52 3300031995 Ga0307409_100114593 Ga0307409_1001145932 553
53 3300036712 Ga0316584_0086832 Ga0316584_0086832_250_1935 553
54 3300048908 Ga0496105_0042918 Ga0496105_0042918_1144_2826 553
55 3300048917 Ga0496114_0073086 Ga0496114_0073086_271_1953 553
56 iso_pu_bacteria 2857481737 2857484335 553
57 3300044901 Ga0466960_0005890 Ga0466960_0005890_2987_4651 554
58 3300048903 Ga0496100_0004850 Ga0496100_0004850_2351_4036 554
59 3300048903 Ga0496100_0013992 Ga0496100_0013992_1001_2668 554
60 3300048904 Ga0496101_0063714 Ga0496101_0063714_92_1759 554
61 3300048905 Ga0496102_0022734 Ga0496102_0022734_3283_4950 554
62 3300048905 Ga0496102_0185848 Ga0496102_0185848_88_1755 554
63 3300048907 Ga0496104_0015691 Ga0496104_0015691_3074_4741 554
64 3300048907 Ga0496104_0035797 Ga0496104_0035797_833_2518 554
65 3300048907 Ga0496104_0163224 Ga0496104_0163224_290_1975 554
66 3300048907 Ga0496104_0198889 Ga0496104_0198889_148_1815 554
67 3300048908 Ga0496105_0010193 Ga0496105_0010193_3207_4892 554
68 3300048908 Ga0496105_0016262 Ga0496105_0016262_3128_4795 554
69 3300048908 Ga0496105_0044665 Ga0496105_0044665_791_2458 554
70 3300048910 Ga0496107_0001474 Ga0496107_0001474_4762_6429 554
71 3300048910 Ga0496107_0054732 Ga0496107_0054732_1148_2815 554
72 3300048910 Ga0496107_0129692 Ga0496107_0129692_144_1829 554
73 3300048912 Ga0496109_0063977 Ga0496109_0063977_1287_2954 554
74 3300048912 Ga0496109_0078197 Ga0496109_0078197_370_2037 554
75 3300048912 Ga0496109_0079018 Ga0496109_0079018_390_2075 554
76 3300048916 Ga0496113_0010237 Ga0496113_0010237_4171_5838 554
77 3300048917 Ga0496114_0005041 Ga0496114_0005041_5988_7655 554
78 3300048917 Ga0496114_0007133 Ga0496114_0007133_1916_3583 554
79 3300048917 Ga0496114_0033583 Ga0496114_0033583_2187_3872 554
80 3300048918 Ga0496115_0002196 Ga0496115_0002196_8278_9945 554
81 3300048918 Ga0496115_0004804 Ga0496115_0004804_5068_6735 554
82 3300049568 Ga0501031_0002564 Ga0501031_0002564_4293_6047 554
83 3300049570 Ga0501033_0024506 Ga0501033_0024506_89_1843 554
84 3300049571 Ga0501034_0011529 Ga0501034_0011529_828_2582 554
85 3300049572 Ga0501036_0003026 Ga0501036_0003026_8003_9757 554
86 3300049573 Ga0501037_0001631 Ga0501037_0001631_7212_8966 554
87 3300049575 Ga0501039_0003053 Ga0501039_0003053_7629_9383 554
88 3300049579 Ga0501043_0005525 Ga0501043_0005525_6062_7816 554
89 3300049580 Ga0501046_0004562 Ga0501046_0004562_2973_4727 554
90 3300049582 Ga0501048_0000335 Ga0501048_0000335_26140_27894 554
91 3300049586 Ga0501070_0024700 Ga0501070_0024700_965_2719 554
92 3300049589 Ga0501073_0011300 Ga0501073_0011300_3091_4845 554
93 3300049742 Ga0501080_0001432 Ga0501080_0001432_5370_7124 554
94 3300005548 Ga0070665_100001086 Ga0070665_10000108614 555
95 3300028379 Ga0268266_10003784 Ga0268266_100037846 555
96 3300045976 Ga0466967_0050908 Ga0466967_0050908_371_2041 555
97 3300009148 Ga0105243_10022942 Ga0105243_100229422 556
98 3300025935 Ga0207709_10016471 Ga0207709_100164712 556
99 3300025944 Ga0207661_10040198 Ga0207661_100401982 556
100 3300035398 Ga0316574_0005818 Ga0316574_0005818_1054_2772 556
101 3300035398 Ga0316574_0033581 Ga0316574_0033581_992_2707 556
102 3300036647 Ga0316582_0025752 Ga0316582_0025752_1581_3299 556
103 3300036712 Ga0316584_0005384 Ga0316584_0005384_6106_7824 556
104 3300045976 Ga0466967_0133618 Ga0466967_0133618_405_2132 556
105 3300049583 Ga0501067_0010489 Ga0501067_0010489_1880_3583 556
106 3300049586 Ga0501070_0072464 Ga0501070_0072464_295_1998 556
107 3300049589 Ga0501073_0017131 Ga0501073_0017131_1665_3368 556
108 3300049590 Ga0501074_0014701 Ga0501074_0014701_1960_3663 556
109 3300049593 Ga0501077_0073922 Ga0501077_0073922_335_2038 556
110 3300049742 Ga0501080_0022729 Ga0501080_0022729_173_1876 556
111 3300049744 Ga0501083_0029639 Ga0501083_0029639_1875_3578 556
112 3300060353 Ga0501082_0045072 Ga0501082_0045072_181_1884 556
113 3300005617 Ga0068859_100001257 Ga0068859_10000125712 557
114 3300005842 Ga0068858_100091579 Ga0068858_1000915791 557
115 3300006931 Ga0097620_100001257 Ga0097620_10000125716 557
116 3300031691 Ga0316579_10000979 Ga0316579_100009793 557
117 3300031733 Ga0316577_10013907 Ga0316577_100139072 557
118 3300032137 Ga0316585_10009214 Ga0316585_100092142 557
119 3300036647 Ga0316582_0008885 Ga0316582_0008885_3545_5263 557
120 3300046675 Ga0495657_0040534 Ga0495657_0040534_1288_2970 557
121 3300048905 Ga0496102_0000788 Ga0496102_0000788_14205_15890 557
122 3300048906 Ga0496103_0000239 Ga0496103_0000239_8547_10232 557
123 3300053104 Ga0500556_0001877 Ga0500556_0001877_3067_4740 557
124 3300053117 Ga0500593_000062 Ga0500593_000062_35152_36825 557
125 3300005343 Ga0070687_100005850 Ga0070687_1000058502 559
126 3300005535 Ga0070684_100005162 Ga0070684_1000051625 559
127 3300005843 Ga0068860_100030455 Ga0068860_1000304554 559
128 3300009098 Ga0105245_10004779 Ga0105245_100047799 559
129 3300009177 Ga0105248_10065172 Ga0105248_100651722 559
130 3300010375 Ga0105239_10008873 Ga0105239_100088739 559
131 3300011119 Ga0105246_10003497 Ga0105246_100034974 559
132 3300013306 Ga0163162_10017454 Ga0163162_100174544 559
133 3300013307 Ga0157372_10012370 Ga0157372_100123704 559
134 3300014968 Ga0157379_10034169 Ga0157379_100341692 559
135 3300025904 Ga0207647_10014830 Ga0207647_100148304 559
136 3300025919 Ga0207657_10056041 Ga0207657_100560412 559
137 3300025921 Ga0207652_10067429 Ga0207652_100674292 559
138 3300037471 Ga0395905_0044448 Ga0395905_0044448_2273_3991 559
139 3300048911 Ga0496108_0127190 Ga0496108_0127190_236_1918 559
140 3300048914 Ga0496111_0004468 Ga0496111_0004468_2283_3965 559
141 3300006038 Ga0075365_10030875 Ga0075365_100308753 561
142 3300044706 Ga0466964_0011270 Ga0466964_0011270_408_2177 561
143 3300045976 Ga0466967_0032124 Ga0466967_0032124_1692_3461 561
144 3300031995 Ga0307409_100038796 Ga0307409_1000387964 562
145 3300006048 Ga0075363_100032111 Ga0075363_1000321112 564
146 3300006177 Ga0075362_10000604 Ga0075362_100006046 564
147 3300006178 Ga0075367_10007075 Ga0075367_100070753 564
148 3300009094 Ga0111539_10067957 Ga0111539_100679572 564
149 3300048917 Ga0496114_0055594 Ga0496114_0055594_178_1872 564
150 3300050489 nmdc:mga03683_12986_c1 nmdc:mga03683_12986_c1_127_1821 564
151 3300050491 nmdc:mga00v17_43695_c1 nmdc:mga00v17_43695_c1_857_2554 564
152 3300050492 nmdc:mga0yw44_16004_c1 nmdc:mga0yw44_16004_c1_761_2455 564
153 3300050494 nmdc:mga06z11_8305_c1 nmdc:mga06z11_8305_c1_1361_3058 564
154 3300050511 nmdc:mga08y16_41002_c1 nmdc:mga08y16_41002_c1_212_1915 564
155 3300053088 Ga0500644_0000338 Ga0500644_0000338_3054_4748 564
156 3300031456 Ga0307513_10002683 Ga0307513_1000268313 566
157 3300006051 Ga0075364_10020476 Ga0075364_100204763 567
158 3300005367 Ga0070667_100001478 Ga0070667_1000014788 568
159 3300005843 Ga0068860_100000739 Ga0068860_10000073924 568
160 3300006038 Ga0075365_10044893 Ga0075365_100448933 568
161 3300006042 Ga0075368_10006484 Ga0075368_100064843 568
162 3300006048 Ga0075363_100043483 Ga0075363_1000434832 568
163 3300006051 Ga0075364_10011887 Ga0075364_100118874 568
164 3300006051 Ga0075364_10018555 Ga0075364_100185551 568
165 3300006051 Ga0075364_10071580 Ga0075364_100715802 568
166 3300006178 Ga0075367_10010428 Ga0075367_100104285 568
167 3300009098 Ga0105245_10005667 Ga0105245_100056674 568
168 3300009177 Ga0105248_10037743 Ga0105248_100377434 568
169 3300025986 Ga0207658_10007657 Ga0207658_100076572 568
170 3300028381 Ga0268264_10000959 Ga0268264_1000095925 568
171 3300048912 Ga0496109_0057651 Ga0496109_0057651_192_1898 568
172 3300048913 Ga0496110_0099841 Ga0496110_0099841_317_2023 568
173 3300049575 Ga0501039_0063530 Ga0501039_0063530_505_2211 568
174 3300049587 Ga0501071_0099994 Ga0501071_0099994_332_2038 568
175 3300049588 Ga0501072_0147166 Ga0501072_0147166_134_1840 568
176 3300050490 nmdc:mga03n38_21982_c1 nmdc:mga03n38_21982_c1_315_2021 568
177 3300050490 nmdc:mga03n38_36900_c1 nmdc:mga03n38_36900_c1_177_1883 568
178 3300050491 nmdc:mga00v17_11791_c1 nmdc:mga00v17_11791_c1_466_2172 568
179 3300050491 nmdc:mga00v17_20418_c1 nmdc:mga00v17_20418_c1_496_2202 568
180 3300050496 nmdc:mga07m45_65868_c1 nmdc:mga07m45_65868_c1_69_1775 568
181 3300050496 nmdc:mga07m45_8394_c1 nmdc:mga07m45_8394_c1_131_1837 568
182 3300002075 JGI24738J21930_10003088 JGI24738J21930_100030882 569
183 3300005338 Ga0068868_100013869 Ga0068868_1000138692 569
184 3300005366 Ga0070659_100053177 Ga0070659_1000531772 569
185 3300005535 Ga0070684_100006687 Ga0070684_1000066874 569
186 3300005544 Ga0070686_100013356 Ga0070686_1000133563 569
187 3300005578 Ga0068854_100018758 Ga0068854_1000187584 569
188 3300005615 Ga0070702_100008423 Ga0070702_1000084235 569
189 3300005719 Ga0068861_100043012 Ga0068861_1000430124 569
190 3300005840 Ga0068870_10005507 Ga0068870_100055075 569
191 3300006038 Ga0075365_10005278 Ga0075365_100052785 569
192 3300006048 Ga0075363_100001299 Ga0075363_1000012998 569
193 3300006178 Ga0075367_10005907 Ga0075367_100059078 569
194 3300006881 Ga0068865_100022691 Ga0068865_1000226915 569
195 3300014325 Ga0163163_10024178 Ga0163163_100241781 569
196 3300014326 Ga0157380_10017181 Ga0157380_100171812 569
197 3300014745 Ga0157377_10003006 Ga0157377_1000300610 569
198 3300017792 Ga0163161_10025511 Ga0163161_100255113 569
199 3300025901 Ga0207688_10004627 Ga0207688_100046277 569
200 3300025932 Ga0207690_10057357 Ga0207690_100573572 569
201 3300025937 Ga0207669_10008443 Ga0207669_100084435 569
202 3300025940 Ga0207691_10017419 Ga0207691_100174195 569
203 3300025960 Ga0207651_10038068 Ga0207651_100380682 569
204 3300025961 Ga0207712_10037758 Ga0207712_100377582 569
205 3300026075 Ga0207708_10000410 Ga0207708_100004108 569
206 3300026089 Ga0207648_10011193 Ga0207648_100111933 569
207 3300026118 Ga0207675_100016874 Ga0207675_1000168745 569
208 3300026142 Ga0207698_10007219 Ga0207698_100072196 569
209 3300037471 Ga0395905_0118968 Ga0395905_0118968_524_2248 569
210 3300044693 Ga0466961_0076572 Ga0466961_0076572_125_1840 569
211 3300044765 Ga0466970_0003003 Ga0466970_0003003_3215_4930 569
212 3300044765 Ga0466970_0015910 Ga0466970_0015910_1078_2793 569
213 3300050490 nmdc:mga03n38_16983_c1 nmdc:mga03n38_16983_c1_288_1997 569
214 3300050494 nmdc:mga06z11_12182_c1 nmdc:mga06z11_12182_c1_706_2415 569
215 3300050495 nmdc:mga04h51_3253_c1 nmdc:mga04h51_3253_c1_1817_3526 569

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

261

568

0.86

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

344

458

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
1i8t-assembly1.cif.gz_B structure of udp-galactopyranose mutase from e.coli 0.9655 235 273
1wam-assembly1.cif.gz_A structure of udp-galactopyranose mutase from klebsiella pneumoniae with fadh- 0.9424 238 273
1sez-assembly1.cif.gz_A crystal structure of protoporphyrinogen ix oxidase 0.9342 238 273
3hdq-assembly1.cif.gz_A crystal structure of udp-galactopyranose mutase (oxidized form) in complex with substrate 0.9307 233 273
8eeg-assembly1.cif.gz_A c. ammoniagenes monoamine oxidase (mao) bound to dopamine 0.9251 238 273
ID Description Score Start End Superfamily
af_Q2FZ31_2_179_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9815 238 266 3.50.50.60
5uthA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9624 350 475 3.50.50.60
4ykgA03 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9621 350 475 3.50.50.60
3f8rD02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.961 350 475 3.50.50.60
5uthA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9549 350 475 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A519FZY1-F1-model_v4 Response regulator 0.9655 3 128
AF-A0A1W1YA32-F1-model_v4 Thioredoxin reductase (NADPH) 0.9299 231 549 GO:0016668
AF-A0A3C0IRB5-F1-model_v4 Thioredoxin-disulfide reductase 0.9296 378 481 GO:0016491
AF-A0A1W1YA32-F1-model_v4 Thioredoxin reductase (NADPH) 0.9181 231 549 GO:0016668
AF-A0A1L8ZBM5-F1-model_v4 Thioredoxin reductase 0.9133 233 345 GO:0016491

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Predicted Structure (AlphaFold2)

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