F326977

General Info

Members Datasets Scaffolds Average Seq Length
215 145 215 663

Family's Representative Sequence

Representative Sequence 3300050510|nmdc:mga06r32_51191_c1|nmdc:mga06r32_51191_c1_1716_3803
Length 695
Sequence MEHCRRRVACPDEATAAGDDGERGSGAGERCVIREGDLLWTPDAARIERAQLTRFMNWLARERGHRFDDYASLWRWSVQDLEGFWSALWEYFDIRASVPPACALGRRTMPGAEWFPGARLNYAENVLCRARHGHEALIYLSEGRAPVSLSWGELAARVRRLAAALRRLGIVKGDRVVGCLPNTPDAMVAMLATTSIGAIWSGCGPDFGARGVLDRFSQLTPKLMFCVDGYRYGGKPFERRAEMRGIVEGLPTLEHVVLLPYLDADDRRPLRAGSLLWDEVAAGNDASAPTMEFEQVAPDHPLWILFSSGTTGLPKPIVHGHAGITIEQMKNLQFHMDVQPGQRMFFYTTTGWMMWNFLVSAPLSGVIPVLYDGSPAWPGPDALWQMADQTGISFFGASPTYQQLLARQGIVPRERFDLSRLESVTLAGSPVTPECMLWFHENVKRDMWVQSGSGGTDVCSGFCGGVVIQPVYAGEIQAPQLGVALAAFDADGRSVVDEVGEMVITEPMPSMPVCFWNDPGDARYRESYFEEYPGVWRHGDFFRINARGGCFVLGRSDATLNRHGVRIGTAEIYRGLAELPEVEDALVVNLDLPGGRFFMPLFVKLREGRELDESIEQAIRDRLRTTYSPRHVPDRIIQVTSIPYTLTGKKLEVPVRRILSGVPEERAANRAAMADPTALDFFIEYARTQRDYSFS

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
53 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
83 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
84 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
85 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
86 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
87 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
88 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
89 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
90 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
91 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
92 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
95 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
96 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
97 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
98 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
99 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
100 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
103 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
104 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
105 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
106 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
107 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
114 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
115 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
116 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
124 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
127 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
128 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
129 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
141 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
145 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.93
Nodule 0
Rhizoplane 3.26
Rhizosphere 92.09
Stem 0
Stem Tuber 0
Unclassified 3.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10005755 3300003203 Bacteria 5731
2 Ga0065712_10071309 3300005290 Bacteria 5347
3 Ga0070683_100012192 3300005329 Bacteria 7461
4 Ga0070690_100031392 3300005330 Bacteria 3309
5 Ga0070680_100013212 3300005336 Bacteria 6427
6 Ga0070682_100007385 3300005337 Bacteria 6201
7 Ga0070689_100001277 3300005340 Bacteria 15988
8 Ga0070675_100001785 3300005354 Bacteria 15872
9 Ga0070675_100026359 3300005354 Bacteria 4665
10 Ga0070671_100008509 3300005355 Bacteria 8224
11 Ga0070673_100004512 3300005364 Bacteria 8810
12 Ga0070673_100008362 3300005364 Bacteria 6878
13 Ga0070673_100012716 3300005364 Bacteria 5789
14 Ga0070667_100022349 3300005367 Bacteria 5246
15 Ga0070667_100066663 3300005367 Bacteria 3059
16 Ga0070709_10003119 3300005434 Bacteria 8894
17 Ga0070710_10010440 3300005437 Bacteria 4562
18 Ga0070711_100003953 3300005439 Bacteria 8711
19 Ga0070711_100042071 3300005439 Bacteria 3087
20 Ga0070705_100019173 3300005440 Bacteria 3597
21 Ga0070700_100011254 3300005441 Bacteria 4954
22 Ga0070694_100040661 3300005444 Bacteria 3099
23 Ga0070681_10002706 3300005458 Bacteria 16308
24 Ga0070681_10008159 3300005458 Bacteria 10250
25 Ga0070681_10030852 3300005458 Bacteria 5380
26 Ga0070681_10034743 3300005458 Bacteria 5063
27 Ga0070685_10059007 3300005466 Bacteria 2239
28 Ga0070684_100077657 3300005535 Bacteria 2933
29 Ga0070672_100028552 3300005543 Bacteria 4174
30 Ga0070696_100030993 3300005546 Bacteria 3663
31 Ga0070665_100001514 3300005548 Bacteria 26960
32 Ga0070665_100038832 3300005548 Bacteria 4786
33 Ga0070665_100040990 3300005548 Bacteria 4654
34 Ga0070665_100042561 3300005548 Bacteria 4565
35 Ga0070665_100048399 3300005548 Bacteria 4269
36 Ga0070665_100053966 3300005548 Bacteria 4031
37 Ga0070704_100045794 3300005549 Bacteria 3046
38 Ga0068855_100001773 3300005563 Bacteria 26981
39 Ga0068855_100004606 3300005563 Bacteria 16832
40 Ga0068855_100015666 3300005563 Bacteria 9123
41 Ga0070664_100040604 3300005564 Bacteria 3923
42 Ga0070664_100123377 3300005564 Bacteria 2270
43 Ga0068859_100006051 3300005617 Bacteria 12283
44 Ga0068859_100007848 3300005617 Bacteria 10832
45 Ga0068864_100014165 3300005618 Bacteria 6618
46 Ga0068861_100003558 3300005719 Bacteria 10364
47 Ga0068863_100016819 3300005841 Bacteria 7017
48 Ga0068858_100000996 3300005842 Bacteria 29246
49 Ga0068860_100004144 3300005843 Bacteria 14857
50 Ga0068860_100085682 3300005843 Bacteria 2998
51 Ga0081455_10000579 3300005937 Bacteria 47717
52 Ga0081539_10000123 3300005985 Bacteria 181245
53 Ga0081539_10012936 3300005985 Bacteria 6348
54 Ga0070715_10000650 3300006163 Bacteria 9254
55 Ga0075428_100011937 3300006844 Bacteria 9663
56 Ga0075428_100016037 3300006844 Bacteria 8285
57 Ga0075430_100007113 3300006846 Bacteria 9438
58 Ga0075431_100004921 3300006847 Bacteria 13157
59 Ga0097620_100006051 3300006931 Bacteria 12283
60 Ga0097620_100007848 3300006931 Bacteria 10832
61 Ga0105250_10010982 3300009092 Bacteria 3765
62 Ga0105240_10001255 3300009093 Bacteria 44029
63 Ga0105240_10004574 3300009093 Bacteria 20978
64 Ga0105240_10010185 3300009093 Bacteria 13232
65 Ga0105240_10046724 3300009093 Bacteria 5484
66 Ga0111539_10001202 3300009094 Bacteria 34464
67 Ga0111539_10029885 3300009094 Bacteria 6629
68 Ga0111539_10035222 3300009094 Bacteria 6063
69 Ga0111539_10124706 3300009094 Bacteria 3018
70 Ga0111539_10188435 3300009094 Bacteria 2408
71 Ga0114129_10058418 3300009147 Bacteria 5395
72 Ga0114129_10064299 3300009147 Bacteria 5119
73 Ga0105237_10119192 3300009545 Bacteria 2633
74 Ga0105249_10043095 3300009553 Bacteria 4105
75 Ga0105239_10070190 3300010375 Bacteria 3848
76 Ga0157370_10000843 3300013104 Bacteria 38906
77 Ga0157372_10068291 3300013307 Bacteria 3996
78 Ga0157375_10067313 3300013308 Bacteria 3578
79 Ga0163163_10027474 3300014325 Bacteria 5451
80 Ga0157379_10003934 3300014968 Bacteria 12661
81 Ga0213874_10002769 3300021377 Bacteria 3814
82 Ga0207685_10006374 3300025905 Bacteria 3209
83 Ga0207645_10038744 3300025907 Bacteria 3055
84 Ga0207707_10000094 3300025912 Bacteria 89818
85 Ga0207707_10005182 3300025912 Bacteria 11427
86 Ga0207707_10047568 3300025912 Bacteria 3735
87 Ga0207695_10028070 3300025913 Bacteria 6251
88 Ga0207695_10033285 3300025913 Bacteria 5624
89 Ga0207695_10079335 3300025913 Bacteria 3327
90 Ga0207652_10014668 3300025921 Bacteria 6350
91 Ga0207652_10025367 3300025921 Bacteria 4927
92 Ga0207652_10029741 3300025921 Bacteria 4571
93 Ga0207681_10010153 3300025923 Bacteria 5765
94 Ga0207681_10025960 3300025923 Bacteria 3774
95 Ga0207659_10003157 3300025926 Bacteria 9850
96 Ga0207659_10003730 3300025926 Bacteria 9184
97 Ga0207687_10019709 3300025927 Bacteria 4471
98 Ga0207664_10004745 3300025929 Bacteria 9234
99 Ga0207644_10005836 3300025931 Bacteria 8020
100 Ga0207706_10006355 3300025933 Bacteria 10978
101 Ga0207706_10074238 3300025933 Bacteria 2991
102 Ga0207670_10008428 3300025936 Bacteria 5823
103 Ga0207665_10001130 3300025939 Bacteria 17957
104 Ga0207691_10009288 3300025940 Bacteria 9435
105 Ga0207691_10049256 3300025940 Bacteria 3859
106 Ga0207679_10032428 3300025945 Bacteria 3667
107 Ga0207667_10001596 3300025949 Bacteria 28502
108 Ga0207667_10001737 3300025949 Bacteria 27400
109 Ga0207651_10009212 3300025960 Bacteria 5386
110 Ga0207651_10009221 3300025960 Bacteria 5385
111 Ga0207651_10034128 3300025960 Bacteria 3291
112 Ga0207712_10010235 3300025961 Bacteria 5947
113 Ga0207703_10019229 3300026035 Bacteria 5335
114 Ga0207708_10015839 3300026075 Bacteria 5659
115 Ga0207641_10011391 3300026088 Bacteria 7297
116 Ga0207648_10020986 3300026089 Bacteria 5879
117 Ga0207676_10010887 3300026095 Bacteria 6488
118 Ga0207675_100009554 3300026118 Bacteria 9069
119 Ga0207675_100023109 3300026118 Bacteria 5782
120 Ga0209982_1002149 3300027552 Bacteria 2741
121 Ga0209971_1005171 3300027682 Bacteria 3100
122 Ga0207428_10001555 3300027907 Bacteria 23972
123 Ga0207428_10084043 3300027907 Bacteria 2481
124 Ga0268266_10040537 3300028379 Bacteria 3969
125 Ga0268266_10041232 3300028379 Bacteria 3938
126 Ga0268265_10011407 3300028380 Bacteria 6009
127 Ga0268265_10067425 3300028380 Bacteria 2770
128 Ga0265336_10012771 3300028666 Bacteria 2816
129 Ga0265338_10003114 3300028800 Bacteria 23744
130 Ga0265338_10022314 3300028800 Bacteria 6556
131 Ga0307511_10000008 3300030521 Bacteria 159928
132 Ga0265340_10009244 3300031247 Bacteria 5295
133 Ga0265331_10004271 3300031250 Bacteria 8948
134 Ga0307509_10000099 3300031507 Bacteria 121307
135 Ga0307516_10000305 3300031730 Bacteria 63768
136 Ga0307413_10001287 3300031824 Bacteria 9344
137 Ga0307406_10004640 3300031901 Bacteria 7483
138 Ga0307407_10010159 3300031903 Bacteria 4425
139 Ga0307412_10020397 3300031911 Bacteria 4033
140 Ga0307409_100011666 3300031995 Bacteria 5555
141 Ga0307416_100047045 3300032002 Bacteria 3411
142 Ga0307411_10003277 3300032005 Bacteria 7473
143 Ga0436363_0084344 3300039450 Bacteria 9461
144 Ga0439435_0003956 3300042436 Bacteria 3145
145 Ga0466969_0004853 3300044656 Bacteria 7161
146 Ga0466969_0007602 3300044656 Bacteria 5760
147 Ga0466966_0001376 3300044684 Bacteria 15650
148 Ga0466961_0000376 3300044693 Bacteria 28754
149 Ga0453684_0014074 3300044712 Bacteria 12866
150 Ga0466971_0014977 3300044719 Bacteria 3411
151 Ga0466970_0002546 3300044765 Bacteria 8795
152 Ga0466959_0000875 3300045049 Bacteria 17741
153 Ga0466959_0003679 3300045049 Bacteria 10110
154 Ga0495616_0024269 3300046513 Bacteria 3253
155 Ga0495632_0030258 3300046519 Bacteria 2812
156 Ga0496102_0210599 3300048905 Bacteria 1833
157 Ga0496104_0016467 3300048907 Bacteria 6715
158 Ga0496105_0001533 3300048908 Bacteria 16337
159 Ga0496108_0004690 3300048911 Bacteria 11020
160 Ga0496108_0127774 3300048911 Bacteria 2183
161 Ga0496110_0002282 3300048913 Bacteria 14322
162 Ga0496114_0021941 3300048917 Bacteria 5198
163 Ga0496121_0003236 3300048924 Bacteria 23416
164 Ga0496125_0014409 3300048928 Bacteria 7700
165 Ga0496126_0003855 3300048929 Bacteria 18532
166 Ga0501038_0031548 3300049574 Bacteria 4682
167 Ga0501039_0019147 3300049575 Bacteria 5252
168 Ga0501040_0005052 3300049576 Bacteria 8526
169 Ga0501040_0012412 3300049576 Bacteria 5582
170 Ga0501041_0006127 3300049577 Bacteria 7032
171 Ga0501042_0003508 3300049578 Bacteria 9856
172 Ga0501042_0006733 3300049578 Bacteria 7490
173 Ga0501042_0027581 3300049578 Bacteria 3994
174 Ga0501042_0027640 3300049578 Bacteria 3990
175 Ga0501043_0042152 3300049579 Bacteria 3586
176 Ga0501043_0063690 3300049579 Bacteria 2896
177 Ga0501046_0023208 3300049580 Bacteria 5106
178 Ga0501046_0068034 3300049580 Bacteria 2772
179 Ga0501067_0048076 3300049583 Bacteria 2366
180 Ga0501068_0000516 3300049584 Bacteria 19598
181 Ga0501068_0030084 3300049584 Bacteria 3219
182 Ga0501071_0000513 3300049587 Bacteria 19689
183 Ga0501071_0016673 3300049587 Bacteria 5054
184 Ga0501072_0001228 3300049588 Bacteria 19139
185 Ga0501072_0043333 3300049588 Bacteria 3537
186 Ga0501074_0000792 3300049590 Bacteria 20005
187 Ga0501074_0002050 3300049590 Bacteria 13923
188 Ga0501074_0058240 3300049590 Bacteria 2783
189 Ga0501075_0000586 3300049591 Bacteria 22188
190 Ga0501076_0002500 3300049592 Bacteria 12647
191 Ga0501077_0013375 3300049593 Bacteria 5146
192 Ga0501079_0000437 3300049741 Bacteria 27143
193 Ga0501079_0001738 3300049741 Bacteria 15542
194 Ga0501080_0001774 3300049742 Bacteria 18484
195 Ga0501080_0021164 3300049742 Bacteria 6019
196 Ga0501080_0024113 3300049742 Bacteria 5640
197 Ga0501081_0000138 3300049743 Bacteria 32519
198 Ga0501081_0013826 3300049743 Bacteria 5311
199 Ga0501035_0019588 3300049822 Bacteria 6217
200 Ga0501045_0002600 3300049824 Bacteria 12307
201 nmdc:mga05p37_66502_c1 3300050507 Bacteria 4434
202 nmdc:mga0qj67_80197_c1 3300050509 Bacteria 2615
203 nmdc:mga06r32_34102_c1 3300050510 Bacteria 4798
204 nmdc:mga06r32_51191_c1 3300050510 Bacteria 3952
205 nmdc:mga08y16_23248_c1 3300050511 Bacteria 6544
206 nmdc:mga08y16_397_c1 3300050511 Bacteria 39847
207 nmdc:mga08y16_969_c1 3300050511 Bacteria 27918
208 Ga0500588_0000099 3300053146 Bacteria 11307
209 Ga0500616_0000030 3300053153 Bacteria 415224
210 Ga0501084_0015603 3300054114 Bacteria 6300
211 Ga0501082_0002785 3300060353 Bacteria 15263
212 Ga0501082_0036673 3300060353 Bacteria 4223
213 Ga0501082_0040473 3300060353 Bacteria 4020
214 Ga0466962_0000283 3300061719 Bacteria 21482
215 Ga0530510_0002119 3300061734 Bacteria 13600

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048905 Ga0496102_0210599 Ga0496102_0210599_79_1806 560
2 3300049590 Ga0501074_0058240 Ga0501074_0058240_964_2760 589
3 3300005985 Ga0081539_10012936 Ga0081539_100129362 627
4 3300027552 Ga0209982_1002149 Ga0209982_10021492 631
5 3300005364 Ga0070673_100008362 Ga0070673_1000083623 632
6 3300005841 Ga0068863_100016819 Ga0068863_1000168194 632
7 3300009094 Ga0111539_10029885 Ga0111539_100298853 632
8 3300025940 Ga0207691_10009288 Ga0207691_100092884 632
9 3300025960 Ga0207651_10034128 Ga0207651_100341283 632
10 3300026088 Ga0207641_10011391 Ga0207641_100113915 632
11 3300050511 nmdc:mga08y16_23248_c1 nmdc:mga08y16_23248_c1_2544_4544 632
12 3300005563 Ga0068855_100015666 Ga0068855_1000156662 633
13 3300009093 Ga0105240_10010185 Ga0105240_100101856 633
14 3300031901 Ga0307406_10004640 Ga0307406_100046405 633
15 3300031903 Ga0307407_10010159 Ga0307407_100101593 633
16 3300031995 Ga0307409_100011666 Ga0307409_1000116663 633
17 3300032002 Ga0307416_100047045 Ga0307416_1000470452 633
18 3300044712 Ga0453684_0014074 Ga0453684_0014074_4367_6322 635
19 3300005548 Ga0070665_100040990 Ga0070665_1000409903 636
20 3300005563 Ga0068855_100004606 Ga0068855_1000046068 636
21 3300009093 Ga0105240_10001255 Ga0105240_1000125538 636
22 3300009545 Ga0105237_10119192 Ga0105237_101191922 636
23 3300013307 Ga0157372_10068291 Ga0157372_100682912 636
24 3300025949 Ga0207667_10001737 Ga0207667_100017377 636
25 3300028379 Ga0268266_10041232 Ga0268266_100412323 636
26 3300005719 Ga0068861_100003558 Ga0068861_1000035584 637
27 3300026118 Ga0207675_100023109 Ga0207675_1000231094 637
28 3300049580 Ga0501046_0068034 Ga0501046_0068034_459_2402 638
29 3300005354 Ga0070675_100026359 Ga0070675_1000263592 639
30 3300005441 Ga0070700_100011254 Ga0070700_1000112542 639
31 3300026075 Ga0207708_10015839 Ga0207708_100158395 639
32 3300005340 Ga0070689_100001277 Ga0070689_10000127711 640
33 3300005440 Ga0070705_100019173 Ga0070705_1000191732 640
34 3300005444 Ga0070694_100040661 Ga0070694_1000406612 640
35 3300005546 Ga0070696_100030993 Ga0070696_1000309932 640
36 3300005549 Ga0070704_100045794 Ga0070704_1000457942 640
37 3300005617 Ga0068859_100006051 Ga0068859_1000060514 640
38 3300005618 Ga0068864_100014165 Ga0068864_1000141654 640
39 3300005843 Ga0068860_100085682 Ga0068860_1000856822 640
40 3300006931 Ga0097620_100006051 Ga0097620_1000060514 640
41 3300025936 Ga0207670_10008428 Ga0207670_100084282 640
42 3300026095 Ga0207676_10010887 Ga0207676_100108873 640
43 3300028380 Ga0268265_10011407 Ga0268265_100114073 640
44 3300028666 Ga0265336_10012771 Ga0265336_100127711 640
45 3300005548 Ga0070665_100042561 Ga0070665_1000425613 643
46 3300006846 Ga0075430_100007113 Ga0075430_1000071136 645
47 3300050509 nmdc:mga0qj67_80197_c1 nmdc:mga0qj67_80197_c1_156_2186 645
48 3300050510 nmdc:mga06r32_34102_c1 nmdc:mga06r32_34102_c1_222_2252 645
49 3300013308 Ga0157375_10067313 Ga0157375_100673131 646
50 3300006844 Ga0075428_100016037 Ga0075428_1000160375 647
51 3300006847 Ga0075431_100004921 Ga0075431_1000049211 647
52 3300009094 Ga0111539_10035222 Ga0111539_100352223 647
53 3300009147 Ga0114129_10058418 Ga0114129_100584184 647
54 3300050507 nmdc:mga05p37_66502_c1 nmdc:mga05p37_66502_c1_488_2488 647
55 3300049579 Ga0501043_0042152 Ga0501043_0042152_362_2371 652
56 3300049580 Ga0501046_0023208 Ga0501046_0023208_1053_3062 652
57 3300049583 Ga0501067_0048076 Ga0501067_0048076_228_2222 652
58 3300049584 Ga0501068_0000516 Ga0501068_0000516_1961_3955 652
59 3300049587 Ga0501071_0016673 Ga0501071_0016673_2291_4285 652
60 3300049590 Ga0501074_0000792 Ga0501074_0000792_3199_5193 652
61 3300049741 Ga0501079_0000437 Ga0501079_0000437_6727_8721 652
62 3300049742 Ga0501080_0001774 Ga0501080_0001774_8169_10163 652
63 3300049743 Ga0501081_0013826 Ga0501081_0013826_3098_5107 652
64 3300054114 Ga0501084_0015603 Ga0501084_0015603_213_2222 652
65 3300060353 Ga0501082_0036673 Ga0501082_0036673_2139_4148 652
66 3300021377 Ga0213874_10002769 Ga0213874_100027692 653
67 3300039450 Ga0436363_0084344 Ga0436363_0084344_2399_4387 653
68 3300005290 Ga0065712_10071309 Ga0065712_100713093 654
69 3300005330 Ga0070690_100031392 Ga0070690_1000313922 654
70 3300005337 Ga0070682_100007385 Ga0070682_1000073852 654
71 3300005354 Ga0070675_100001785 Ga0070675_1000017857 654
72 3300005364 Ga0070673_100004512 Ga0070673_1000045125 654
73 3300005364 Ga0070673_100012716 Ga0070673_1000127164 654
74 3300005439 Ga0070711_100003953 Ga0070711_1000039536 654
75 3300005466 Ga0070685_10059007 Ga0070685_100590072 654
76 3300005543 Ga0070672_100028552 Ga0070672_1000285522 654
77 3300005548 Ga0070665_100048399 Ga0070665_1000483992 654
78 3300005564 Ga0070664_100040604 Ga0070664_1000406042 654
79 3300005564 Ga0070664_100123377 Ga0070664_1001233772 654
80 3300005937 Ga0081455_10000579 Ga0081455_1000057943 654
81 3300006844 Ga0075428_100011937 Ga0075428_1000119377 654
82 3300009094 Ga0111539_10001202 Ga0111539_1000120210 654
83 3300009094 Ga0111539_10124706 Ga0111539_101247061 654
84 3300009094 Ga0111539_10188435 Ga0111539_101884352 654
85 3300009147 Ga0114129_10064299 Ga0114129_100642994 654
86 3300014325 Ga0163163_10027474 Ga0163163_100274744 654
87 3300025923 Ga0207681_10010153 Ga0207681_100101533 654
88 3300025926 Ga0207659_10003157 Ga0207659_100031575 654
89 3300025926 Ga0207659_10003730 Ga0207659_100037305 654
90 3300025933 Ga0207706_10074238 Ga0207706_100742382 654
91 3300025940 Ga0207691_10049256 Ga0207691_100492561 654
92 3300025945 Ga0207679_10032428 Ga0207679_100324283 654
93 3300025960 Ga0207651_10009212 Ga0207651_100092122 654
94 3300025960 Ga0207651_10009221 Ga0207651_100092212 654
95 3300027907 Ga0207428_10001555 Ga0207428_100015552 654
96 3300027907 Ga0207428_10084043 Ga0207428_100840433 654
97 3300028800 Ga0265338_10003114 Ga0265338_100031143 654
98 3300031824 Ga0307413_10001287 Ga0307413_100012875 654
99 3300031911 Ga0307412_10020397 Ga0307412_100203972 654
100 3300032005 Ga0307411_10003277 Ga0307411_100032772 654
101 3300042436 Ga0439435_0003956 Ga0439435_0003956_207_2201 654
102 3300046513 Ga0495616_0024269 Ga0495616_0024269_475_2472 654
103 3300046519 Ga0495632_0030258 Ga0495632_0030258_259_2256 654
104 3300048907 Ga0496104_0016467 Ga0496104_0016467_3812_5818 654
105 3300048908 Ga0496105_0001533 Ga0496105_0001533_6649_8655 654
106 3300048917 Ga0496114_0021941 Ga0496114_0021941_1120_3126 654
107 3300049574 Ga0501038_0031548 Ga0501038_0031548_2071_4071 654
108 3300049575 Ga0501039_0019147 Ga0501039_0019147_1476_3476 654
109 3300049576 Ga0501040_0005052 Ga0501040_0005052_3859_5859 654
110 3300049576 Ga0501040_0012412 Ga0501040_0012412_274_2268 654
111 3300049577 Ga0501041_0006127 Ga0501041_0006127_4251_6251 654
112 3300049578 Ga0501042_0003508 Ga0501042_0003508_6076_8070 654
113 3300049578 Ga0501042_0006733 Ga0501042_0006733_3552_5552 654
114 3300049578 Ga0501042_0027581 Ga0501042_0027581_331_2331 654
115 3300049578 Ga0501042_0027640 Ga0501042_0027640_930_2930 654
116 3300049579 Ga0501043_0063690 Ga0501043_0063690_589_2589 654
117 3300049584 Ga0501068_0030084 Ga0501068_0030084_708_2708 654
118 3300049587 Ga0501071_0000513 Ga0501071_0000513_5398_7398 654
119 3300049588 Ga0501072_0001228 Ga0501072_0001228_10760_12760 654
120 3300049588 Ga0501072_0043333 Ga0501072_0043333_725_2731 654
121 3300049590 Ga0501074_0002050 Ga0501074_0002050_2497_4497 654
122 3300049591 Ga0501075_0000586 Ga0501075_0000586_10241_12241 654
123 3300049592 Ga0501076_0002500 Ga0501076_0002500_9499_11499 654
124 3300049593 Ga0501077_0013375 Ga0501077_0013375_2520_4520 654
125 3300049741 Ga0501079_0001738 Ga0501079_0001738_11259_13259 654
126 3300049742 Ga0501080_0021164 Ga0501080_0021164_871_2871 654
127 3300049742 Ga0501080_0024113 Ga0501080_0024113_459_2459 654
128 3300049743 Ga0501081_0000138 Ga0501081_0000138_29618_31618 654
129 3300049822 Ga0501035_0019588 Ga0501035_0019588_607_2607 654
130 3300049824 Ga0501045_0002600 Ga0501045_0002600_2635_4635 654
131 3300050511 nmdc:mga08y16_397_c1 nmdc:mga08y16_397_c1_6497_8491 654
132 3300050511 nmdc:mga08y16_969_c1 nmdc:mga08y16_969_c1_25718_27793 654
133 3300060353 Ga0501082_0002785 Ga0501082_0002785_5047_7047 654
134 3300060353 Ga0501082_0040473 Ga0501082_0040473_987_2981 654
135 3300061734 Ga0530510_0002119 Ga0530510_0002119_2100_4100 654
136 3300003203 JGI25406J46586_10005755 JGI25406J46586_100057554 655
137 3300005329 Ga0070683_100012192 Ga0070683_1000121923 655
138 3300005336 Ga0070680_100013212 Ga0070680_1000132124 655
139 3300005355 Ga0070671_100008509 Ga0070671_1000085092 655
140 3300005367 Ga0070667_100022349 Ga0070667_1000223494 655
141 3300005367 Ga0070667_100066663 Ga0070667_1000666632 655
142 3300005434 Ga0070709_10003119 Ga0070709_100031198 655
143 3300005437 Ga0070710_10010440 Ga0070710_100104402 655
144 3300005439 Ga0070711_100042071 Ga0070711_1000420712 655
145 3300005458 Ga0070681_10002706 Ga0070681_1000270615 655
146 3300005458 Ga0070681_10008159 Ga0070681_100081593 655
147 3300005458 Ga0070681_10030852 Ga0070681_100308523 655
148 3300005458 Ga0070681_10034743 Ga0070681_100347432 655
149 3300005535 Ga0070684_100077657 Ga0070684_1000776572 655
150 3300005548 Ga0070665_100001514 Ga0070665_10000151418 655
151 3300005548 Ga0070665_100038832 Ga0070665_1000388322 655
152 3300005548 Ga0070665_100053966 Ga0070665_1000539662 655
153 3300005563 Ga0068855_100001773 Ga0068855_10000177325 655
154 3300005617 Ga0068859_100007848 Ga0068859_1000078486 655
155 3300005842 Ga0068858_100000996 Ga0068858_1000009965 655
156 3300005843 Ga0068860_100004144 Ga0068860_10000414413 655
157 3300005985 Ga0081539_10000123 Ga0081539_10000123134 655
158 3300006163 Ga0070715_10000650 Ga0070715_100006505 655
159 3300006931 Ga0097620_100007848 Ga0097620_1000078483 655
160 3300009092 Ga0105250_10010982 Ga0105250_100109822 655
161 3300009093 Ga0105240_10004574 Ga0105240_1000457418 655
162 3300009093 Ga0105240_10046724 Ga0105240_100467242 655
163 3300009553 Ga0105249_10043095 Ga0105249_100430953 655
164 3300010375 Ga0105239_10070190 Ga0105239_100701902 655
165 3300013104 Ga0157370_10000843 Ga0157370_1000084334 655
166 3300014968 Ga0157379_10003934 Ga0157379_1000393412 655
167 3300025905 Ga0207685_10006374 Ga0207685_100063742 655
168 3300025907 Ga0207645_10038744 Ga0207645_100387442 655
169 3300025912 Ga0207707_10000094 Ga0207707_1000009462 655
170 3300025912 Ga0207707_10005182 Ga0207707_100051829 655
171 3300025912 Ga0207707_10047568 Ga0207707_100475682 655
172 3300025913 Ga0207695_10028070 Ga0207695_100280704 655
173 3300025913 Ga0207695_10033285 Ga0207695_100332855 655
174 3300025913 Ga0207695_10079335 Ga0207695_100793352 655
175 3300025921 Ga0207652_10014668 Ga0207652_100146682 655
176 3300025921 Ga0207652_10025367 Ga0207652_100253672 655
177 3300025921 Ga0207652_10029741 Ga0207652_100297412 655
178 3300025923 Ga0207681_10025960 Ga0207681_100259602 655
179 3300025927 Ga0207687_10019709 Ga0207687_100197092 655
180 3300025929 Ga0207664_10004745 Ga0207664_100047453 655
181 3300025931 Ga0207644_10005836 Ga0207644_100058365 655
182 3300025933 Ga0207706_10006355 Ga0207706_100063555 655
183 3300025939 Ga0207665_10001130 Ga0207665_1000113016 655
184 3300025949 Ga0207667_10001596 Ga0207667_100015962 655
185 3300025961 Ga0207712_10010235 Ga0207712_100102353 655
186 3300026035 Ga0207703_10019229 Ga0207703_100192292 655
187 3300026089 Ga0207648_10020986 Ga0207648_100209865 655
188 3300026118 Ga0207675_100009554 Ga0207675_1000095542 655
189 3300027682 Ga0209971_1005171 Ga0209971_10051712 655
190 3300028379 Ga0268266_10040537 Ga0268266_100405372 655
191 3300028380 Ga0268265_10067425 Ga0268265_100674252 655
192 3300028800 Ga0265338_10022314 Ga0265338_100223144 655
193 3300030521 Ga0307511_10000008 Ga0307511_1000000843 655
194 3300031247 Ga0265340_10009244 Ga0265340_100092444 655
195 3300031250 Ga0265331_10004271 Ga0265331_100042712 655
196 3300031507 Ga0307509_10000099 Ga0307509_10000099101 655
197 3300031730 Ga0307516_10000305 Ga0307516_1000030555 655
198 3300044656 Ga0466969_0004853 Ga0466969_0004853_573_2570 655
199 3300044656 Ga0466969_0007602 Ga0466969_0007602_1574_3571 655
200 3300044684 Ga0466966_0001376 Ga0466966_0001376_6697_8694 655
201 3300044693 Ga0466961_0000376 Ga0466961_0000376_9266_11263 655
202 3300044719 Ga0466971_0014977 Ga0466971_0014977_781_2778 655
203 3300044765 Ga0466970_0002546 Ga0466970_0002546_15_2012 655
204 3300045049 Ga0466959_0000875 Ga0466959_0000875_15223_17220 655
205 3300045049 Ga0466959_0003679 Ga0466959_0003679_4315_6312 655
206 3300048911 Ga0496108_0004690 Ga0496108_0004690_8679_10679 655
207 3300048911 Ga0496108_0127774 Ga0496108_0127774_54_2087 655
208 3300048913 Ga0496110_0002282 Ga0496110_0002282_8599_10599 655
209 3300048924 Ga0496121_0003236 Ga0496121_0003236_19062_21056 655
210 3300048928 Ga0496125_0014409 Ga0496125_0014409_2882_4876 655
211 3300048929 Ga0496126_0003855 Ga0496126_0003855_3639_5636 655
212 3300050510 nmdc:mga06r32_51191_c1 nmdc:mga06r32_51191_c1_1716_3803 655
213 3300053146 Ga0500588_0000099 Ga0500588_0000099_5931_7925 655
214 3300053153 Ga0500616_0000030 Ga0500616_0000030_247581_249599 655
215 3300061719 Ga0466962_0000283 Ga0466962_0000283_3189_5186 655

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16177

ACAS_N

Acetyl-coenzyme A synthetase N-terminus

70

126

0.96

PF00501

AMP-binding

AMP-binding enzyme

125

511

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
7knp-assembly1.cif.gz_C crystal structure of acetyl-coa synthetase in complex with adenosine-5'-butylphosphate from cryptococcus neoformans var. grubii serotype a (h99) 0.9241 39 512
4wd1-assembly1.cif.gz_A acetoacetyl-coa synthetase from streptomyces lividans 0.9029 6 649
5vpv-assembly3.cif.gz_C crystal structure of apo cryptococcus neoformans h99 acetyl-coa synthetase with an acetylated active site lysine 0.8991 25 515
4wd1-assembly1.cif.gz_A acetoacetyl-coa synthetase from streptomyces lividans 0.8989 6 649
8g0u-assembly1.cif.gz_C crystal structure of acetyl-coa synthetase in complex with an isopropyl ester amp inhibitor from cryptococcus neoformans h99 0.8863 38 500
ID Description Score Start End Superfamily
af_A3QK15_25_542_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9547 18 516 3.40.50.12780
af_Q9JMI1_543_663_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9434 519 640 3.30.300.30
af_Q21166_65_572_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9423 29 516 3.40.50.12780
af_A0A0R0JS26_74_160_3.40.50.980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.925 126 193 3.40.50.980
af_Q21166_574_699_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9213 519 645 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A7W1FVE6-F1-model_v4 AMP-binding protein 0.9702 25 347 GO:0030729
AF-A0A7W1FVE6-F1-model_v4 AMP-binding protein 0.9672 25 347 GO:0030729
AF-A0A353KCT7-F1-model_v4 deleted 0.9624 8 398
AF-A0A2R6B331-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9587 560 653 GO:0030729
AF-A0A6A4ST10-F1-model_v4 Acetoacetyl-CoA synthetase (EC 6.2.1.16) 0.9571 38 462 GO:0005524
GO:0005829
GO:0006631
GO:0030729
GO:0032024

Feature Viewer

pLDDT pTM Quality
86.91 0.81 High
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Predicted Structure (AlphaFold2)

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