F327602
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 216 | 155 | 432 | 490 |
Family's Representative Sequence
| Representative Sequence | 3300013308|Ga0157375_10001229|Ga0157375_1000122910 |
| Length | 600 |
| Sequence | MTTDSIISKVWGFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYSRPPYSRQVGIPADYAWPTLKNLKGAELETHYIKTLLELATKPGMLGQIFTKSQNKIQDPAKLARVVEMVDETEWVMLGTDTKGAIYEGLLEKNAEDTKSGAGQYFTPRALIKAMVECIRPQPGKTIADPACGTGGFFLSAYDYLVANHALNKAQKAFLKHETFSGHEIVANTRRLCLMNMFLHNIGEIDGESLVSSNDALVADSGKRFDYVLANPPFGKKSSMTFTNEEGEEEKDDLVYNRQDFWATSANKQLNFLQHIRTMLKTTGSAAVVMPDNVLFEGGVGETVRKKLLENTDLHTVLRLPTGVFYAQGVKANVLFFDNQPAAKAPWTKEIWYYDYRTNVHHTLKRKPLRLEDLADFINCYFGGSPSLSSGGEGRGEVVISRRSRHTRKETWHAEKNPEGRWRKYTYAEIIARDKTSLDLTWLKDKSLADLDNLPDPKDLARRHRRKHRSRPEQLPHRPRCPWKMKSLPMKPSKHHWIEITAPCIAIWDSPTPGQQTQESYNPPVEERNRQSHWFRCTLQAETNSLKRFQEETATELDALLPSILDRAFKGAF |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 2 | 3300002987 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB | Metagenome | Endosphere |
| 3 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 4 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 5 | 3300003759 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 | Metagenome | Endosphere |
| 6 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 7 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 8 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 9 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 10 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 11 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 13 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 19 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 20 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 22 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 23 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 24 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 25 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009979 | Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG | Metagenome | Rhizosphere |
| 34 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 43 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 44 | 3300015689 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 | Metagenome | Rhizosphere |
| 45 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 46 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 47 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 49 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 50 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 55 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 74 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 75 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 76 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 77 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 78 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 79 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 80 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 81 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 82 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 83 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 84 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 85 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 86 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 87 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 88 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 89 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 90 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 91 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 92 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 93 | 3300042127 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 | Metagenome | Rhizosphere |
| 94 | 3300042130 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 | Metagenome | Rhizosphere |
| 95 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 96 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 97 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 98 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 99 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 100 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 101 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 111 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 112 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 113 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 115 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 117 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 126 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 127 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 128 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 129 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 130 | 3300053154 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere | Metagenome | Endosphere |
| 131 | 3300053727 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere | Metagenome | Endosphere |
| 132 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 133 | 2510065045 | Paraburkholderia sprentiae WSM5005 | Isolate | Nodule |
| 134 | 2513237165 | Cupriavidus neocaledonicus STM6070 | Isolate | Nodule |
| 135 | 2599185161 | Pseudomonas sp. NFPP09 | Isolate | Rhizoplane |
| 136 | 2599185162 | Pseudomonas sp. NFPP10 | Isolate | Rhizoplane |
| 137 | 2599185163 | Pseudomonas sp. NFPP12 | Isolate | Rhizoplane |
| 138 | 2599185166 | Pseudomonas sp. NFPP08 | Isolate | Rhizoplane |
| 139 | 2599185168 | Pseudomonas sp. NFPP05 | Isolate | Rhizoplane |
| 140 | 2606217733 | Pseudomonas aeruginosa NFHH01 | Isolate | Rhizoplane |
| 141 | 2718217991 | Paraburkholderia sprentiae WSM5005 | Isolate | Nodule |
| 142 | 2738541265 | Pseudomonas sp. GV077 | Isolate | Unclassified |
| 143 | 2738541279 | Flavobacterium sp. GV069 | Isolate | Unclassified |
| 144 | 2738541282 | Pseudomonas sp. GV058 | Isolate | Unclassified |
| 145 | 2738541285 | Flavobacterium sp. GV030 | Isolate | Unclassified |
| 146 | 2738541303 | Pseudomonas sp. GV105 | Isolate | Unclassified |
| 147 | 2738543007 | Flavobacterium sp. GV063 | Isolate | Unclassified |
| 148 | 2739367663 | Pedobacter sp. YR510 | Isolate | Unclassified |
| 149 | 2818991437 | Pedobacter terrae 518 | Isolate | Unclassified |
| 150 | 2840677318 | Chitinophaga alhagiae T22 | Isolate | Unclassified |
| 151 | 2842733646 | Variovorax sp. R-72446 | Isolate | Unclassified |
| 152 | 2896085136 | Chitinophaga alhagiae T22 | Isolate | Unclassified |
| 153 | 2913844669 | Nostocales cyanobacterium LEGE 12452 | Isolate | Unclassified |
| 154 | 2919513703 | Luteimonas sp. 3794 | Isolate | Unclassified |
| 155 | 2928135762 | Paraburkholderia terricola 1988 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 89.35 |
| Metatranscriptomes | 0 |
| Isolates | 10.65 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 11.57 |
| Nodule | 1.39 |
| Rhizoplane | 2.78 |
| Rhizosphere | 71.76 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.93 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0157375_10001229 | 3300013308 | Bacteria | 22105 |
| 2 | JGI25159J45721_1001055 | 3300002987 | Bacteria | 11767 |
| 3 | JGI25159J45721_1001254 | 3300002987 | Bacteria | 10701 |
| 4 | rootH2_10088383 | 3300003320 | Bacteria | 4478 |
| 5 | rootH1_10028319 | 3300003323 | Bacteria | 8425 |
| 6 | Ga0055525_1000030 | 3300003759 | Bacteria | 318094 |
| 7 | Ga0055536_1001887 | 3300003781 | Bacteria | 12175 |
| 8 | Ga0055530_10000121 | 3300003791 | Bacteria | 67516 |
| 9 | Ga0055530_10002268 | 3300003791 | Bacteria | 12636 |
| 10 | Ga0055540_1000021 | 3300003792 | Bacteria | 208733 |
| 11 | Ga0055531_10000774 | 3300003794 | Bacteria | 26616 |
| 12 | Ga0065714_10065052 | 3300005288 | Bacteria | 13449 |
| 13 | Ga0070670_100107087 | 3300005331 | Bacteria | 2409 |
| 14 | Ga0070689_100005452 | 3300005340 | Bacteria | 8688 |
| 15 | Ga0070673_100071580 | 3300005364 | Bacteria | 2787 |
| 16 | Ga0070663_100006901 | 3300005455 | Bacteria | 6875 |
| 17 | Ga0070662_100001591 | 3300005457 | Bacteria | 14032 |
| 18 | Ga0070707_100001234 | 3300005468 | Bacteria | 25091 |
| 19 | Ga0070698_100026385 | 3300005471 | Bacteria | 6047 |
| 20 | Ga0070679_100001677 | 3300005530 | Bacteria | 19971 |
| 21 | Ga0070679_100008050 | 3300005530 | Bacteria | 9906 |
| 22 | Ga0068855_100146985 | 3300005563 | Bacteria | 2682 |
| 23 | Ga0070664_100027748 | 3300005564 | Bacteria | 4707 |
| 24 | Ga0068854_100004627 | 3300005578 | Bacteria | 8679 |
| 25 | Ga0068859_100006459 | 3300005617 | Bacteria | 11893 |
| 26 | Ga0068851_10000023 | 3300005834 | Bacteria | 126799 |
| 27 | Ga0075365_10105927 | 3300006038 | Bacteria | 1929 |
| 28 | Ga0097620_100006459 | 3300006931 | Bacteria | 11893 |
| 29 | Ga0105251_10003933 | 3300009011 | Bacteria | 10542 |
| 30 | Ga0105244_10000309 | 3300009036 | Bacteria | 47486 |
| 31 | Ga0105244_10000920 | 3300009036 | Bacteria | 24880 |
| 32 | Ga0105244_10001785 | 3300009036 | Bacteria | 16882 |
| 33 | Ga0105244_10002158 | 3300009036 | Bacteria | 15086 |
| 34 | Ga0105250_10001936 | 3300009092 | Bacteria | 10740 |
| 35 | Ga0105240_10000131 | 3300009093 | Bacteria | 154386 |
| 36 | Ga0105240_10001563 | 3300009093 | Bacteria | 38829 |
| 37 | Ga0105240_10015339 | 3300009093 | Bacteria | 10423 |
| 38 | Ga0105240_10132702 | 3300009093 | Bacteria | 2985 |
| 39 | Ga0105247_10000720 | 3300009101 | Bacteria | 25749 |
| 40 | Ga0105241_10020549 | 3300009174 | Unclassified | 4879 |
| 41 | Ga0105237_10002102 | 3300009545 | Bacteria | 25150 |
| 42 | Ga0105032_100002 | 3300009979 | Bacteria | 303884 |
| 43 | Ga0105239_10017668 | 3300010375 | Bacteria | 7890 |
| 44 | Ga0105246_10093885 | 3300011119 | Bacteria | 2168 |
| 45 | Ga0157373_10000013 | 3300013100 | Bacteria | 186870 |
| 46 | Ga0157373_10000042 | 3300013100 | Bacteria | 113564 |
| 47 | Ga0157373_10000782 | 3300013100 | Bacteria | 24475 |
| 48 | Ga0157373_10043103 | 3300013100 | Bacteria | 3223 |
| 49 | Ga0157373_10080263 | 3300013100 | Bacteria | 2301 |
| 50 | Ga0157371_10005358 | 3300013102 | Bacteria | 10843 |
| 51 | Ga0157371_10010284 | 3300013102 | Bacteria | 7299 |
| 52 | Ga0157371_10105678 | 3300013102 | Bacteria | 1998 |
| 53 | Ga0157370_10005725 | 3300013104 | Bacteria | 13895 |
| 54 | Ga0157370_10011481 | 3300013104 | Bacteria | 9260 |
| 55 | Ga0157370_10016178 | 3300013104 | Bacteria | 7562 |
| 56 | Ga0157370_10031687 | 3300013104 | Bacteria | 5170 |
| 57 | Ga0157369_10011274 | 3300013105 | Bacteria | 10157 |
| 58 | Ga0157374_10011986 | 3300013296 | Bacteria | 7527 |
| 59 | Ga0157372_10183962 | 3300013307 | Bacteria | 2419 |
| 60 | Ga0182008_10000033 | 3300014497 | Bacteria | 153579 |
| 61 | Ga0182007_10005781 | 3300015262 | Bacteria | 5378 |
| 62 | Ga0183360_10001 | 3300015689 | Bacteria | 3943671 |
| 63 | Ga0213872_10034463 | 3300021361 | Bacteria | 2317 |
| 64 | Ga0209563_100028 | 3300025230 | Bacteria | 509539 |
| 65 | Ga0209258_101479 | 3300025242 | Bacteria | 8101 |
| 66 | Ga0209455_1002175 | 3300025272 | Bacteria | 7780 |
| 67 | Ga0209130_1000401 | 3300025284 | Bacteria | 47425 |
| 68 | Ga0209676_1000069 | 3300025292 | Bacteria | 312462 |
| 69 | Ga0209050_1000023 | 3300025298 | Bacteria | 537172 |
| 70 | Ga0209050_1003308 | 3300025298 | Bacteria | 12056 |
| 71 | Ga0207426_1002046 | 3300025302 | Bacteria | 14078 |
| 72 | Ga0209051_1000017 | 3300025303 | Bacteria | 537172 |
| 73 | Ga0209257_1000041 | 3300025304 | Bacteria | 537172 |
| 74 | Ga0207656_10000025 | 3300025321 | Bacteria | 87435 |
| 75 | Ga0207655_1000339 | 3300025728 | Bacteria | 68128 |
| 76 | Ga0207655_1000503 | 3300025728 | Bacteria | 49985 |
| 77 | Ga0207655_1002493 | 3300025728 | Bacteria | 14885 |
| 78 | Ga0207655_1005988 | 3300025728 | Bacteria | 8136 |
| 79 | Ga0207713_1002096 | 3300025735 | Bacteria | 14888 |
| 80 | Ga0207710_10000024 | 3300025900 | Bacteria | 319633 |
| 81 | Ga0207705_10014449 | 3300025909 | Bacteria | 5683 |
| 82 | Ga0207654_10053615 | 3300025911 | Unclassified | 2328 |
| 83 | Ga0207695_10000217 | 3300025913 | Bacteria | 155047 |
| 84 | Ga0207695_10011824 | 3300025913 | Bacteria | 10532 |
| 85 | Ga0207695_10016248 | 3300025913 | Bacteria | 8721 |
| 86 | Ga0207657_10055501 | 3300025919 | Bacteria | 3421 |
| 87 | Ga0207652_10000366 | 3300025921 | Bacteria | 46915 |
| 88 | Ga0207652_10001276 | 3300025921 | Bacteria | 22439 |
| 89 | Ga0207646_10001545 | 3300025922 | Bacteria | 28197 |
| 90 | Ga0207650_10093625 | 3300025925 | Bacteria | 2300 |
| 91 | Ga0207690_10006104 | 3300025932 | Bacteria | 7139 |
| 92 | Ga0207706_10006725 | 3300025933 | Bacteria | 10630 |
| 93 | Ga0207706_10038155 | 3300025933 | Bacteria | 4261 |
| 94 | Ga0207670_10005981 | 3300025936 | Viruses | 6720 |
| 95 | Ga0207679_10011249 | 3300025945 | Bacteria | 5785 |
| 96 | Ga0207651_10032750 | 3300025960 | Bacteria | 3343 |
| 97 | Ga0207640_10001460 | 3300025981 | Bacteria | 12780 |
| 98 | Ga0207678_10104620 | 3300026067 | Bacteria | 2416 |
| 99 | Ga0265319_1001958 | 3300028563 | Bacteria | 11649 |
| 100 | Ga0265336_10001469 | 3300028666 | Bacteria | 10708 |
| 101 | Ga0307517_10000929 | 3300028786 | Bacteria | 49793 |
| 102 | Ga0307515_10000118 | 3300028794 | Bacteria | 190444 |
| 103 | Ga0307515_10083800 | 3300028794 | Bacteria | 4105 |
| 104 | Ga0265320_10005057 | 3300031240 | Bacteria | 8528 |
| 105 | Ga0265327_10002165 | 3300031251 | Bacteria | 21635 |
| 106 | Ga0265316_10000186 | 3300031344 | Bacteria | 71372 |
| 107 | Ga0265316_10049723 | 3300031344 | Bacteria | 3301 |
| 108 | Ga0307408_100000197 | 3300031548 | Bacteria | 65580 |
| 109 | Ga0307408_100104087 | 3300031548 | Bacteria | 2168 |
| 110 | Ga0307516_10000624 | 3300031730 | Bacteria | 47647 |
| 111 | Ga0307405_10074198 | 3300031731 | Bacteria | 2199 |
| 112 | Ga0307406_10026343 | 3300031901 | Bacteria | 3490 |
| 113 | Ga0307510_10014038 | 3300033180 | Bacteria | 9484 |
| 114 | Ga0395899_0005126 | 3300037312 | Bacteria | 10199 |
| 115 | Ga0395899_0008185 | 3300037312 | Bacteria | 8055 |
| 116 | Ga0395899_0012930 | 3300037312 | Bacteria | 6389 |
| 117 | Ga0395899_0064629 | 3300037312 | Bacteria | 2690 |
| 118 | Ga0395900_0001175 | 3300037418 | Bacteria | 32617 |
| 119 | Ga0395900_0003468 | 3300037418 | Bacteria | 17029 |
| 120 | Ga0395900_0007932 | 3300037418 | Bacteria | 10928 |
| 121 | Ga0395900_0009151 | 3300037418 | Bacteria | 10146 |
| 122 | Ga0395900_0014094 | 3300037418 | Bacteria | 8161 |
| 123 | Ga0395900_0024230 | 3300037418 | Bacteria | 6213 |
| 124 | Ga0395900_0066272 | 3300037418 | Bacteria | 3711 |
| 125 | Ga0395898_0003253 | 3300037466 | Bacteria | 18260 |
| 126 | Ga0395898_0004594 | 3300037466 | Bacteria | 15066 |
| 127 | Ga0395898_0005293 | 3300037466 | Bacteria | 13953 |
| 128 | Ga0395898_0025351 | 3300037466 | Bacteria | 5976 |
| 129 | Ga0395905_0035556 | 3300037471 | Bacteria | 4678 |
| 130 | Ga0395901_0000404 | 3300038443 | Bacteria | 51301 |
| 131 | Ga0395901_0024436 | 3300038443 | Bacteria | 6202 |
| 132 | Ga0395901_0189187 | 3300038443 | Bacteria | 2159 |
| 133 | Ga0400489_77976 | 3300039093 | Bacteria | 2014 |
| 134 | Ga0436361_1062713 | 3300039447 | Bacteria | 3497 |
| 135 | Ga0436363_0760720 | 3300039450 | Bacteria | 2754 |
| 136 | Ga0450890_000003 | 3300042127 | Bacteria | 110079 |
| 137 | Ga0450892_000178 | 3300042130 | Bacteria | 7268 |
| 138 | Ga0450892_001410 | 3300042130 | Bacteria | 2358 |
| 139 | Ga0451577_0000447 | 3300042876 | Bacteria | 72385 |
| 140 | Ga0453683_0011307 | 3300044673 | Bacteria | 5887 |
| 141 | Ga0466961_0000322 | 3300044693 | Bacteria | 31575 |
| 142 | Ga0453684_0001335 | 3300044712 | Bacteria | 72426 |
| 143 | Ga0453684_0002310 | 3300044712 | Bacteria | 46860 |
| 144 | Ga0453684_0009507 | 3300044712 | Bacteria | 16999 |
| 145 | Ga0453684_0017165 | 3300044712 | Bacteria | 11244 |
| 146 | Ga0453684_0033014 | 3300044712 | Bacteria | 7225 |
| 147 | Ga0453684_0034560 | 3300044712 | Bacteria | 7013 |
| 148 | Ga0466959_0039740 | 3300045049 | Bacteria | 3477 |
| 149 | Ga0451576_0000723 | 3300045051 | Bacteria | 66531 |
| 150 | Ga0451576_0001965 | 3300045051 | Bacteria | 32695 |
| 151 | Ga0451576_0002559 | 3300045051 | Bacteria | 26842 |
| 152 | Ga0495605_0000280 | 3300046474 | Bacteria | 56986 |
| 153 | Ga0495584_0008424 | 3300046491 | Bacteria | 5341 |
| 154 | Ga0495596_0050721 | 3300046500 | Bacteria | 1626 |
| 155 | Ga0495583_0009244 | 3300046506 | Bacteria | 5907 |
| 156 | Ga0495616_0000089 | 3300046513 | Bacteria | 77466 |
| 157 | Ga0495666_0001345 | 3300046526 | Bacteria | 11919 |
| 158 | Ga0495649_0005728 | 3300046694 | Bacteria | 7839 |
| 159 | Ga0495660_0000093 | 3300046810 | Bacteria | 95425 |
| 160 | Ga0495674_0014664 | 3300047319 | Bacteria | 7332 |
| 161 | Ga0496116_0055239 | 3300048919 | Bacteria | 2610 |
| 162 | Ga0496117_0001667 | 3300048920 | Bacteria | 31036 |
| 163 | Ga0496118_0001578 | 3300048921 | Bacteria | 33807 |
| 164 | Ga0496118_0013609 | 3300048921 | Bacteria | 7680 |
| 165 | Ga0501031_0000290 | 3300049568 | Bacteria | 28542 |
| 166 | Ga0501033_0000036 | 3300049570 | Bacteria | 148612 |
| 167 | Ga0501033_0028800 | 3300049570 | Bacteria | 4173 |
| 168 | Ga0501034_0000275 | 3300049571 | Bacteria | 92805 |
| 169 | Ga0501034_0000633 | 3300049571 | Bacteria | 54605 |
| 170 | Ga0501034_0000898 | 3300049571 | Bacteria | 43341 |
| 171 | Ga0501034_0003631 | 3300049571 | Bacteria | 17489 |
| 172 | Ga0501034_0020619 | 3300049571 | Bacteria | 6733 |
| 173 | Ga0501034_0039154 | 3300049571 | Bacteria | 4802 |
| 174 | Ga0501034_0056643 | 3300049571 | Bacteria | 3943 |
| 175 | Ga0501036_0013949 | 3300049572 | Bacteria | 6682 |
| 176 | Ga0501037_0070919 | 3300049573 | Bacteria | 2535 |
| 177 | Ga0501038_0003265 | 3300049574 | Bacteria | 15128 |
| 178 | Ga0501038_0017677 | 3300049574 | Bacteria | 6445 |
| 179 | Ga0501039_0122398 | 3300049575 | Bacteria | 2039 |
| 180 | Ga0501043_0003683 | 3300049579 | Bacteria | 12588 |
| 181 | Ga0501080_0216271 | 3300049742 | Bacteria | 1755 |
| 182 | Ga0501083_0013165 | 3300049744 | Bacteria | 5780 |
| 183 | Ga0501035_0020741 | 3300049822 | Bacteria | 6039 |
| 184 | Ga0501044_0003553 | 3300049823 | Bacteria | 17544 |
| 185 | Ga0501044_0024399 | 3300049823 | Bacteria | 6420 |
| 186 | Ga0501045_0006510 | 3300049824 | Bacteria | 8097 |
| 187 | nmdc:mga0yw44_53501_c1 | 3300050492 | Bacteria | 2452 |
| 188 | Ga0500641_0000002 | 3300053096 | Bacteria | 291538 |
| 189 | Ga0500556_0000454 | 3300053104 | Bacteria | 29149 |
| 190 | Ga0500568_0006799 | 3300053139 | Bacteria | 5699 |
| 191 | Ga0500619_005633 | 3300053154 | Bacteria | 2813 |
| 192 | Ga0500611_000042 | 3300053727 | Bacteria | 59104 |
| 193 | Ga0501084_0083694 | 3300054114 | Bacteria | 2678 |
| 194 | 2510253045 | 2510065045 | Bacteria | 7761063 |
| 195 | 2514042621 | 2513237165 | Bacteria | 6771773 |
| 196 | 2599364385 | 2599185161 | Bacteria | 6960462 |
| 197 | 2599370706 | 2599185162 | Bacteria | 6957254 |
| 198 | 2599377101 | 2599185163 | Bacteria | 6995158 |
| 199 | 2599395931 | 2599185166 | Bacteria | 6959206 |
| 200 | 2599408321 | 2599185168 | Bacteria | 6997636 |
| 201 | 2608382103 | 2606217733 | Bacteria | 6360972 |
| 202 | 2719638838 | 2718217991 | Bacteria | 7829542 |
| 203 | 2738674510 | 2738541265 | Bacteria | 6594665 |
| 204 | 2738733299 | 2738541279 | Bacteria | 6149495 |
| 205 | 2738752903 | 2738541282 | Bacteria | 6593925 |
| 206 | 2738765837 | 2738541285 | Bacteria | 6150075 |
| 207 | 2738861944 | 2738541303 | Bacteria | 6591772 |
| 208 | 2739214880 | 2738543007 | Bacteria | 6149845 |
| 209 | 2739647657 | 2739367663 | Bacteria | 5040914 |
| 210 | 2819549787 | 2818991437 | Bacteria | 5805520 |
| 211 | 2840678652 | 2840677318 | Bacteria | 2664183 |
| 212 | 2842738682 | 2842733646 | Bacteria | 5716726 |
| 213 | 2896086470 | 2896085136 | Bacteria | 6129793 |
| 214 | 2913844952 | 2913844669 | Bacteria | 8381711 |
| 215 | 2919514778 | 2919513703 | Bacteria | 3844312 |
| 216 | 2928139714 | 2928135762 | Bacteria | 7259641 |
| 217 | Ga0157375_10001229 | |||
| 218 | JGI25159J45721_1001055 | |||
| 219 | JGI25159J45721_1001254 | |||
| 220 | rootH2_10088383 | |||
| 221 | rootH1_10028319 | |||
| 222 | Ga0055525_1000030 | |||
| 223 | Ga0055536_1001887 | |||
| 224 | Ga0055530_10000121 | |||
| 225 | Ga0055530_10002268 | |||
| 226 | Ga0055540_1000021 | |||
| 227 | Ga0055531_10000774 | |||
| 228 | Ga0065714_10065052 | |||
| 229 | Ga0070670_100107087 | |||
| 230 | Ga0070689_100005452 | |||
| 231 | Ga0070673_100071580 | |||
| 232 | Ga0070663_100006901 | |||
| 233 | Ga0070662_100001591 | |||
| 234 | Ga0070707_100001234 | |||
| 235 | Ga0070698_100026385 | |||
| 236 | Ga0070679_100001677 | |||
| 237 | Ga0070679_100008050 | |||
| 238 | Ga0068855_100146985 | |||
| 239 | Ga0070664_100027748 | |||
| 240 | Ga0068854_100004627 | |||
| 241 | Ga0068859_100006459 | |||
| 242 | Ga0068851_10000023 | |||
| 243 | Ga0075365_10105927 | |||
| 244 | Ga0097620_100006459 | |||
| 245 | Ga0105251_10003933 | |||
| 246 | Ga0105244_10000309 | |||
| 247 | Ga0105244_10000920 | |||
| 248 | Ga0105244_10001785 | |||
| 249 | Ga0105244_10002158 | |||
| 250 | Ga0105250_10001936 | |||
| 251 | Ga0105240_10000131 | |||
| 252 | Ga0105240_10001563 | |||
| 253 | Ga0105240_10015339 | |||
| 254 | Ga0105240_10132702 | |||
| 255 | Ga0105247_10000720 | |||
| 256 | Ga0105241_10020549 | |||
| 257 | Ga0105237_10002102 | |||
| 258 | Ga0105032_100002 | |||
| 259 | Ga0105239_10017668 | |||
| 260 | Ga0105246_10093885 | |||
| 261 | Ga0157373_10000013 | |||
| 262 | Ga0157373_10000042 | |||
| 263 | Ga0157373_10000782 | |||
| 264 | Ga0157373_10043103 | |||
| 265 | Ga0157373_10080263 | |||
| 266 | Ga0157371_10005358 | |||
| 267 | Ga0157371_10010284 | |||
| 268 | Ga0157371_10105678 | |||
| 269 | Ga0157370_10005725 | |||
| 270 | Ga0157370_10011481 | |||
| 271 | Ga0157370_10016178 | |||
| 272 | Ga0157370_10031687 | |||
| 273 | Ga0157369_10011274 | |||
| 274 | Ga0157374_10011986 | |||
| 275 | Ga0157372_10183962 | |||
| 276 | Ga0182008_10000033 | |||
| 277 | Ga0182007_10005781 | |||
| 278 | Ga0183360_10001 | |||
| 279 | Ga0213872_10034463 | |||
| 280 | Ga0209563_100028 | |||
| 281 | Ga0209258_101479 | |||
| 282 | Ga0209455_1002175 | |||
| 283 | Ga0209130_1000401 | |||
| 284 | Ga0209676_1000069 | |||
| 285 | Ga0209050_1000023 | |||
| 286 | Ga0209050_1003308 | |||
| 287 | Ga0207426_1002046 | |||
| 288 | Ga0209051_1000017 | |||
| 289 | Ga0209257_1000041 | |||
| 290 | Ga0207656_10000025 | |||
| 291 | Ga0207655_1000339 | |||
| 292 | Ga0207655_1000503 | |||
| 293 | Ga0207655_1002493 | |||
| 294 | Ga0207655_1005988 | |||
| 295 | Ga0207713_1002096 | |||
| 296 | Ga0207710_10000024 | |||
| 297 | Ga0207705_10014449 | |||
| 298 | Ga0207654_10053615 | |||
| 299 | Ga0207695_10000217 | |||
| 300 | Ga0207695_10011824 | |||
| 301 | Ga0207695_10016248 | |||
| 302 | Ga0207657_10055501 | |||
| 303 | Ga0207652_10000366 | |||
| 304 | Ga0207652_10001276 | |||
| 305 | Ga0207646_10001545 | |||
| 306 | Ga0207650_10093625 | |||
| 307 | Ga0207690_10006104 | |||
| 308 | Ga0207706_10006725 | |||
| 309 | Ga0207706_10038155 | |||
| 310 | Ga0207670_10005981 | |||
| 311 | Ga0207679_10011249 | |||
| 312 | Ga0207651_10032750 | |||
| 313 | Ga0207640_10001460 | |||
| 314 | Ga0207678_10104620 | |||
| 315 | Ga0265319_1001958 | |||
| 316 | Ga0265336_10001469 | |||
| 317 | Ga0307517_10000929 | |||
| 318 | Ga0307515_10000118 | |||
| 319 | Ga0307515_10083800 | |||
| 320 | Ga0265320_10005057 | |||
| 321 | Ga0265327_10002165 | |||
| 322 | Ga0265316_10000186 | |||
| 323 | Ga0265316_10049723 | |||
| 324 | Ga0307408_100000197 | |||
| 325 | Ga0307408_100104087 | |||
| 326 | Ga0307516_10000624 | |||
| 327 | Ga0307405_10074198 | |||
| 328 | Ga0307406_10026343 | |||
| 329 | Ga0307510_10014038 | |||
| 330 | Ga0395899_0005126 | |||
| 331 | Ga0395899_0008185 | |||
| 332 | Ga0395899_0012930 | |||
| 333 | Ga0395899_0064629 | |||
| 334 | Ga0395900_0001175 | |||
| 335 | Ga0395900_0003468 | |||
| 336 | Ga0395900_0007932 | |||
| 337 | Ga0395900_0009151 | |||
| 338 | Ga0395900_0014094 | |||
| 339 | Ga0395900_0024230 | |||
| 340 | Ga0395900_0066272 | |||
| 341 | Ga0395898_0003253 | |||
| 342 | Ga0395898_0004594 | |||
| 343 | Ga0395898_0005293 | |||
| 344 | Ga0395898_0025351 | |||
| 345 | Ga0395905_0035556 | |||
| 346 | Ga0395901_0000404 | |||
| 347 | Ga0395901_0024436 | |||
| 348 | Ga0395901_0189187 | |||
| 349 | Ga0400489_77976 | |||
| 350 | Ga0436361_1062713 | |||
| 351 | Ga0436363_0760720 | |||
| 352 | Ga0450890_000003 | |||
| 353 | Ga0450892_000178 | |||
| 354 | Ga0450892_001410 | |||
| 355 | Ga0451577_0000447 | |||
| 356 | Ga0453683_0011307 | |||
| 357 | Ga0466961_0000322 | |||
| 358 | Ga0453684_0001335 | |||
| 359 | Ga0453684_0002310 | |||
| 360 | Ga0453684_0009507 | |||
| 361 | Ga0453684_0017165 | |||
| 362 | Ga0453684_0033014 | |||
| 363 | Ga0453684_0034560 | |||
| 364 | Ga0466959_0039740 | |||
| 365 | Ga0451576_0000723 | |||
| 366 | Ga0451576_0001965 | |||
| 367 | Ga0451576_0002559 | |||
| 368 | Ga0495605_0000280 | |||
| 369 | Ga0495584_0008424 | |||
| 370 | Ga0495596_0050721 | |||
| 371 | Ga0495583_0009244 | |||
| 372 | Ga0495616_0000089 | |||
| 373 | Ga0495666_0001345 | |||
| 374 | Ga0495649_0005728 | |||
| 375 | Ga0495660_0000093 | |||
| 376 | Ga0495674_0014664 | |||
| 377 | Ga0496116_0055239 | |||
| 378 | Ga0496117_0001667 | |||
| 379 | Ga0496118_0001578 | |||
| 380 | Ga0496118_0013609 | |||
| 381 | Ga0501031_0000290 | |||
| 382 | Ga0501033_0000036 | |||
| 383 | Ga0501033_0028800 | |||
| 384 | Ga0501034_0000275 | |||
| 385 | Ga0501034_0000633 | |||
| 386 | Ga0501034_0000898 | |||
| 387 | Ga0501034_0003631 | |||
| 388 | Ga0501034_0020619 | |||
| 389 | Ga0501034_0039154 | |||
| 390 | Ga0501034_0056643 | |||
| 391 | Ga0501036_0013949 | |||
| 392 | Ga0501037_0070919 | |||
| 393 | Ga0501038_0003265 | |||
| 394 | Ga0501038_0017677 | |||
| 395 | Ga0501039_0122398 | |||
| 396 | Ga0501043_0003683 | |||
| 397 | Ga0501080_0216271 | |||
| 398 | Ga0501083_0013165 | |||
| 399 | Ga0501035_0020741 | |||
| 400 | Ga0501044_0003553 | |||
| 401 | Ga0501044_0024399 | |||
| 402 | Ga0501045_0006510 | |||
| 403 | nmdc:mga0yw44_53501_c1 | |||
| 404 | Ga0500641_0000002 | |||
| 405 | Ga0500556_0000454 | |||
| 406 | Ga0500568_0006799 | |||
| 407 | Ga0500619_005633 | |||
| 408 | Ga0500611_000042 | |||
| 409 | Ga0501084_0083694 | |||
| 410 | 2510253045 | |||
| 411 | 2514042621 | |||
| 412 | 2599364385 | |||
| 413 | 2599370706 | |||
| 414 | 2599377101 | |||
| 415 | 2599395931 | |||
| 416 | 2599408321 | |||
| 417 | 2608382103 | |||
| 418 | 2719638838 | |||
| 419 | 2738674510 | |||
| 420 | 2738733299 | |||
| 421 | 2738752903 | |||
| 422 | 2738765837 | |||
| 423 | 2738861944 | |||
| 424 | 2739214880 | |||
| 425 | 2739647657 | |||
| 426 | 2819549787 | |||
| 427 | 2840678652 | |||
| 428 | 2842738682 | |||
| 429 | 2896086470 | |||
| 430 | 2913844952 | |||
| 431 | 2919514778 | |||
| 432 | 2928139714 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2okc-assembly1.cif.gz_A | crystal structure of type i restriction enzyme stysji m protein (np_813429.1) from bacteroides thetaiotaomicron vpi-5482 at 2.20 a resolution | 0.8927 | 5 | 443 |
| 2okc-assembly2.cif.gz_B | crystal structure of type i restriction enzyme stysji m protein (np_813429.1) from bacteroides thetaiotaomicron vpi-5482 at 2.20 a resolution | 0.8823 | 2 | 443 |
| 2okc-assembly1.cif.gz_A | crystal structure of type i restriction enzyme stysji m protein (np_813429.1) from bacteroides thetaiotaomicron vpi-5482 at 2.20 a resolution | 0.8808 | 5 | 443 |
| 2okc-assembly2.cif.gz_B | crystal structure of type i restriction enzyme stysji m protein (np_813429.1) from bacteroides thetaiotaomicron vpi-5482 at 2.20 a resolution | 0.8746 | 2 | 443 |
| 1aqi-assembly2.cif.gz_B | structure of adenine-n6-dna-methyltransferase taqi | 0.7835 | 149 | 383 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2okcA01 | Mainly Alpha;Up-down Bundle;Ferritin;N6 adenine-specific DNA methyltransferase, N-terminal domain | 0.9394 | 5 | 121 | 1.20.1260.30 |
| 2okcA01 | Mainly Alpha;Up-down Bundle;Ferritin;N6 adenine-specific DNA methyltransferase, N-terminal domain | 0.9238 | 5 | 121 | 1.20.1260.30 |
| 2okcB02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.897 | 124 | 443 | 3.40.50.150 |
| 2okcB02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8827 | 124 | 443 | 3.40.50.150 |
| af_P08957_150_472_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.831 | 149 | 440 | 3.40.50.150 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A351VF20-F1-model_v4 | site-specific DNA-methyltransferase (adenine-specific) (EC 2.1.1.72) | 0.9802 | 1 | 106 |
GO:0009007
GO:0009307 GO:0032259 |
| AF-A0A519Z8Q6-F1-model_v4 | site-specific DNA-methyltransferase (adenine-specific) (EC 2.1.1.72) | 0.9707 | 1 | 144 |
GO:0009007
GO:0009307 GO:0032259 |
| AF-A0A2M7IZL4-F1-model_v4 | site-specific DNA-methyltransferase (adenine-specific) (EC 2.1.1.72) | 0.9702 | 1 | 145 |
GO:0009007
GO:0009307 GO:0032259 |
| AF-A0A485F6E5-F1-model_v4 | deleted | 0.9687 | 1 | 151 |
|
| AF-A0A351VF20-F1-model_v4 | site-specific DNA-methyltransferase (adenine-specific) (EC 2.1.1.72) | 0.9623 | 1 | 106 |
GO:0009007
GO:0009307 GO:0032259 |