F327992

General Info

Members Datasets Scaffolds Average Seq Length
216 145 412 240

Family's Representative Sequence

Representative Sequence 3300047472|Ga0495686_0004031|Ga0495686_0004031_10789_11583
Length 264
Sequence MRHDSVRLRTCAAWLASGRSIRGRATMMKLYSGDLSPYSARVRMQIYAKGLTDIALERPAHFGMPKFREENPIGRIPVLDIDGDLMPESEVIAEYLEEIHPEPSMLGATPRETAHIRTVARIGDIYIMNNMFMLSPQSRAATRNDGIVELLGGQVVRNIKALDRLIGRDGFACCGRLTMADCALVPGLFLVENVLPTVGVDNPIPANANVAAYWAAIQRNEHAAKTLAELHRGLKERREMIRNGSFQKMMAAAKAAMEAAESQA

Samples

Sample ID Description Type Environment
1 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
6 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
53 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
54 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
55 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
56 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
57 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
86 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
87 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
88 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
89 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
90 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
91 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
92 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
93 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
94 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
95 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
96 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
97 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
98 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
99 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
100 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
101 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
102 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
104 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
105 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
110 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
111 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
112 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
113 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
114 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
115 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
116 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
117 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
118 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
119 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
120 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
121 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
122 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
123 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
126 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
127 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
130 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
131 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
132 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
133 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
134 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
138 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
139 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
140 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
141 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
142 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
143 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
144 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
145 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.15
Metatranscriptomes 0
Isolates 1.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.02
Nodule 0
Rhizoplane 5.09
Rhizosphere 81.02
Stem 0
Stem Tuber 0
Unclassified 15.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495686_0004031 3300047472 Bacteria 12279
2 rootH2_10136803 3300003320 Unclassified 2099
3 Ga0055530_10000135 3300003791 Bacteria 65036
4 Ga0055531_10001048 3300003794 Bacteria 21804
5 Ga0055543_1003916 3300004625 Bacteria 4207
6 Ga0065165_1000412 3300005262 Bacteria 68242
7 Ga0070658_10027617 3300005327 Bacteria 4552
8 Ga0070658_10380931 3300005327 Bacteria 1210
9 Ga0070660_100351242 3300005339 Bacteria 1214
10 Ga0070660_100520465 3300005339 Bacteria 991
11 Ga0070691_10033335 3300005341 Bacteria 2423
12 Ga0070692_10401158 3300005345 Unclassified 866
13 Ga0070671_100175082 3300005355 Bacteria 1815
14 Ga0070673_100036447 3300005364 Bacteria 3739
15 Ga0070713_100272672 3300005436 Bacteria 1550
16 Ga0070711_100010991 3300005439 Bacteria 5612
17 Ga0070678_100105685 3300005456 Bacteria 2192
18 Ga0070662_100066050 3300005457 Bacteria 2654
19 Ga0070681_10091517 3300005458 Unclassified 2992
20 Ga0070681_10234060 3300005458 Unclassified 1751
21 Ga0068853_100003548 3300005539 Bacteria 11931
22 Ga0070695_100006749 3300005545 Bacteria 6792
23 Ga0070665_100000015 3300005548 Bacteria 462744
24 Ga0068855_100059966 3300005563 Bacteria 4451
25 Ga0068855_100297698 3300005563 Bacteria 1787
26 Ga0068855_100430802 3300005563 Bacteria 1442
27 Ga0070664_100033596 3300005564 Bacteria 4298
28 Ga0068857_100044716 3300005577 Bacteria 3929
29 Ga0068856_100027534 3300005614 Bacteria 5544
30 Ga0068856_100081771 3300005614 Bacteria 3205
31 Ga0068852_100008313 3300005616 Bacteria 7637
32 Ga0068852_100164454 3300005616 Bacteria 2075
33 Ga0068864_100008688 3300005618 Bacteria 8380
34 Ga0068863_100076663 3300005841 Bacteria 3162
35 Ga0068858_100002509 3300005842 Bacteria 18511
36 Ga0070717_10434608 3300006028 Bacteria 1181
37 Ga0075365_10248529 3300006038 Bacteria 1249
38 Ga0075363_100178768 3300006048 Bacteria 1206
39 Ga0068871_100308239 3300006358 Bacteria 1391
40 Ga0068865_100003963 3300006881 Bacteria 8879
41 Ga0075436_100219003 3300006914 Unclassified 1350
42 Ga0105240_10003275 3300009093 Bacteria 25313
43 Ga0105240_10005144 3300009093 Bacteria 19569
44 Ga0105240_10094362 3300009093 Bacteria 3650
45 Ga0105240_10139286 3300009093 Bacteria 2902
46 Ga0105240_10417956 3300009093 Bacteria 1507
47 Ga0105240_10536841 3300009093 Bacteria 1296
48 Ga0105240_10579970 3300009093 Bacteria 1237
49 Ga0105245_10165379 3300009098 Bacteria 2103
50 Ga0105245_10507715 3300009098 Bacteria 1223
51 Ga0105243_10017159 3300009148 Bacteria 5475
52 Ga0105241_10035222 3300009174 Unclassified 3765
53 Ga0105242_10015540 3300009176 Bacteria 5912
54 Ga0105248_10002688 3300009177 Bacteria 19757
55 Ga0105248_10040133 3300009177 Bacteria 5247
56 Ga0105248_10526601 3300009177 Bacteria 1333
57 Ga0105248_10765663 3300009177 Bacteria 1089
58 Ga0105237_10007187 3300009545 Bacteria 12227
59 Ga0105237_10060622 3300009545 Bacteria 3784
60 Ga0105237_10423833 3300009545 Bacteria 1336
61 Ga0105238_10006019 3300009551 Bacteria 12024
62 Ga0105238_10074042 3300009551 Bacteria 3399
63 Ga0105238_10137445 3300009551 Unclassified 2421
64 Ga0105238_10919915 3300009551 Bacteria 893
65 Ga0105239_10055433 3300010375 Bacteria 4347
66 Ga0157370_10019510 3300013104 Bacteria 6799
67 Ga0157370_10129353 3300013104 Unclassified 2356
68 Ga0157369_10046383 3300013105 Bacteria 4723
69 Ga0157369_10294831 3300013105 Unclassified 1688
70 Ga0157374_10345363 3300013296 Unclassified 1478
71 Ga0163162_10015339 3300013306 Bacteria 7486
72 Ga0163162_10025556 3300013306 Bacteria 5836
73 Ga0163162_10094695 3300013306 Unclassified 3073
74 Ga0163162_10243662 3300013306 Bacteria 1929
75 Ga0157372_10140509 3300013307 Unclassified 2781
76 Ga0157372_10187757 3300013307 Unclassified 2393
77 Ga0157375_10013599 3300013308 Bacteria 7250
78 Ga0163163_10361615 3300014325 Bacteria 1508
79 Ga0157379_10033149 3300014968 Bacteria 4606
80 Ga0157379_10066695 3300014968 Bacteria 3218
81 Ga0157379_10435727 3300014968 Bacteria 1208
82 Ga0213873_10021724 3300021358 Bacteria 1512
83 Ga0213872_10066017 3300021361 Bacteria 1634
84 Ga0213876_10000300 3300021384 Bacteria 44553
85 Ga0209026_1000953 3300025250 Bacteria 14522
86 Ga0209758_1000528 3300025297 Bacteria 61055
87 Ga0209050_1000141 3300025298 Bacteria 173116
88 Ga0209257_1000288 3300025304 Bacteria 111141
89 Ga0207705_10317557 3300025909 Bacteria 1197
90 Ga0207695_10002525 3300025913 Bacteria 26882
91 Ga0207695_10058932 3300025913 Bacteria 3984
92 Ga0207695_10120845 3300025913 Unclassified 2588
93 Ga0207695_10254098 3300025913 Bacteria 1656
94 Ga0207695_10384829 3300025913 Bacteria 1288
95 Ga0207693_10435417 3300025915 Bacteria 1025
96 Ga0207694_10046115 3300025924 Bacteria 3368
97 Ga0207694_10169647 3300025924 Bacteria 1766
98 Ga0207700_10683499 3300025928 Bacteria 916
99 Ga0207644_10093889 3300025931 Bacteria 2240
100 Ga0207706_10094162 3300025933 Bacteria 2635
101 Ga0207686_10071897 3300025934 Bacteria 2227
102 Ga0207709_10038824 3300025935 Bacteria 2839
103 Ga0207704_10011881 3300025938 Bacteria 4305
104 Ga0207711_10008063 3300025941 Bacteria 8814
105 Ga0207711_10099863 3300025941 Unclassified 2566
106 Ga0207711_10121017 3300025941 Bacteria 2337
107 Ga0207711_10491993 3300025941 Unclassified 1143
108 Ga0207679_10044358 3300025945 Unclassified 3208
109 Ga0207667_10034822 3300025949 Bacteria 5404
110 Ga0207667_10159947 3300025949 Bacteria 2317
111 Ga0207651_10036567 3300025960 Bacteria 3207
112 Ga0207640_10383361 3300025981 Unclassified 1140
113 Ga0207677_10408734 3300026023 Bacteria 1153
114 Ga0207703_10036273 3300026035 Bacteria 3923
115 Ga0207639_10131798 3300026041 Unclassified 2070
116 Ga0207702_10008519 3300026078 Bacteria 8645
117 Ga0207702_10051415 3300026078 Bacteria 3482
118 Ga0207641_10038011 3300026088 Bacteria 4023
119 Ga0207648_10206739 3300026089 Bacteria 1742
120 Ga0207676_10098286 3300026095 Bacteria 2420
121 Ga0207676_10104056 3300026095 Bacteria 2360
122 Ga0207674_10000584 3300026116 Bacteria 47996
123 Ga0207683_10084644 3300026121 Bacteria 2819
124 Ga0207698_11016550 3300026142 Unclassified 840
125 Ga0268266_10000005 3300028379 Bacteria 1448194
126 Ga0268266_10065703 3300028379 Bacteria 3136
127 Ga0307517_10048660 3300028786 Bacteria 4357
128 Ga0265338_10017575 3300028800 Bacteria 7702
129 Ga0265338_10114961 3300028800 Unclassified 2158
130 Ga0265338_10245201 3300028800 Unclassified 1325
131 Ga0307511_10039667 3300030521 Bacteria 4018
132 Ga0265320_10000247 3300031240 Bacteria 44410
133 Ga0265325_10006084 3300031241 Bacteria 7382
134 Ga0265340_10041192 3300031247 Bacteria 2272
135 Ga0265327_10001088 3300031251 Bacteria 37825
136 Ga0265327_10002283 3300031251 Bacteria 20595
137 Ga0265327_10041554 3300031251 Bacteria 2477
138 Ga0265316_10031192 3300031344 Bacteria 4361
139 Ga0307513_10005639 3300031456 Bacteria 16496
140 Ga0265313_10008564 3300031595 Bacteria 6773
141 Ga0307416_100911029 3300032002 Bacteria 980
142 Ga0307510_10010315 3300033180 Bacteria 11095
143 Ga0373930_0011879 3300034816 Bacteria 1579
144 Ga0373936_0111884 3300035113 Unclassified 1160
145 Ga0373945_0083379 3300035116 Bacteria 1228
146 Ga0373943_0102319 3300035170 Unclassified 1500
147 Ga0373955_0244439 3300035172 Unclassified 1075
148 Ga0373935_0012370 3300035692 Bacteria 5136
149 Ga0373935_0039326 3300035692 Bacteria 2966
150 Ga0373935_0052010 3300035692 Bacteria 2603
151 Ga0373933_0189366 3300035724 Bacteria 1314
152 Ga0373947_0006186 3300035725 Bacteria 6963
153 Ga0373937_0003197 3300036401 Bacteria 13713
154 Ga0373937_0372835 3300036401 Unclassified 1353
155 Ga0373937_0912205 3300036401 Unclassified 827
156 Ga0373925_0009922 3300037068 Bacteria 6916
157 Ga0373925_0081466 3300037068 Bacteria 2461
158 Ga0373925_0150385 3300037068 Bacteria 1828
159 Ga0373925_0307746 3300037068 Unclassified 1280
160 Ga0436364_0660041 3300037853 Bacteria 1991
161 Ga0436365_0039319 3300039437 Bacteria 1237
162 Ga0436365_0464972 3300039437 Bacteria 10000
163 Ga0436365_0865950 3300039437 Bacteria 1280
164 Ga0436365_1490488 3300039437 Bacteria 26833
165 Ga0436360_0868039 3300039438 Bacteria 1375
166 Ga0436361_1111462 3300039447 Unclassified 779
167 Ga0436361_1122798 3300039447 Bacteria 14323
168 Ga0436363_0563174 3300039450 Bacteria 1804
169 Ga0436362_0266238 3300039453 Bacteria 3101
170 Ga0495580_0323983 3300046472 Unclassified 1047
171 Ga0495664_0280561 3300046477 Bacteria 1007
172 Ga0495628_0071723 3300046516 Bacteria 2699
173 Ga0495642_0002044 3300046528 Bacteria 8383
174 Ga0495652_0185068 3300046529 Bacteria 1595
175 Ga0495668_0036057 3300046616 Bacteria 2772
176 Ga0495611_0007200 3300046648 Bacteria 4729
177 Ga0495625_0258944 3300046660 Bacteria 1126
178 Ga0495599_0355924 3300046678 Unclassified 877
179 Ga0495669_0048170 3300046684 Bacteria 1906
180 Ga0495670_0185016 3300046691 Bacteria 1101
181 Ga0495674_0130772 3300047319 Bacteria 2115
182 Ga0495674_0774502 3300047319 Unclassified 748
183 Ga0495672_0093601 3300047320 Bacteria 1645
184 Ga0495677_0190910 3300047445 Bacteria 795
185 Ga0495602_0501353 3300048088 Unclassified 849
186 Ga0496102_0126550 3300048905 Bacteria 2389
187 Ga0496107_0226837 3300048910 Bacteria 1390
188 Ga0496108_0013606 3300048911 Bacteria 6642
189 Ga0496109_0001563 3300048912 Bacteria 19072
190 Ga0496111_0185440 3300048914 Bacteria 1547
191 Ga0496112_0016880 3300048915 Bacteria 6850
192 Ga0496112_0100056 3300048915 Bacteria 2869
193 Ga0496112_0422669 3300048915 Bacteria 1271
194 Ga0496113_0026241 3300048916 Bacteria 4163
195 Ga0496115_0000663 3300048918 Bacteria 25508
196 Ga0496115_0298546 3300048918 Bacteria 1320
197 Ga0501035_0600826 3300049822 Bacteria 897
198 nmdc:mga08x19_262172_c1 3300050514 Unclassified 1195
199 Ga0500641_0044815 3300053096 Bacteria 1799
200 Ga0500562_000241 3300053108 Bacteria 14229
201 Ga0500608_228040 3300053122 Bacteria 746
202 Ga0500645_032820 3300053730 Bacteria 1555
203 2644000855 2643221598 Bacteria 4578346
204 2644085403 2643221614 Bacteria 4260023
205 2644342955 2643221661 Bacteria 4267604
206 2644366255 2643221666 Bacteria 4265935
207 Ga0495686_0004031
208 rootH2_10136803
209 Ga0055530_10000135
210 Ga0055531_10001048
211 Ga0055543_1003916
212 Ga0065165_1000412
213 Ga0070658_10027617
214 Ga0070658_10380931
215 Ga0070660_100351242
216 Ga0070660_100520465
217 Ga0070691_10033335
218 Ga0070692_10401158
219 Ga0070671_100175082
220 Ga0070673_100036447
221 Ga0070713_100272672
222 Ga0070711_100010991
223 Ga0070678_100105685
224 Ga0070662_100066050
225 Ga0070681_10091517
226 Ga0070681_10234060
227 Ga0068853_100003548
228 Ga0070695_100006749
229 Ga0070665_100000015
230 Ga0068855_100059966
231 Ga0068855_100297698
232 Ga0068855_100430802
233 Ga0070664_100033596
234 Ga0068857_100044716
235 Ga0068856_100027534
236 Ga0068856_100081771
237 Ga0068852_100008313
238 Ga0068852_100164454
239 Ga0068864_100008688
240 Ga0068863_100076663
241 Ga0068858_100002509
242 Ga0070717_10434608
243 Ga0075365_10248529
244 Ga0075363_100178768
245 Ga0068871_100308239
246 Ga0068865_100003963
247 Ga0075436_100219003
248 Ga0105240_10003275
249 Ga0105240_10005144
250 Ga0105240_10094362
251 Ga0105240_10139286
252 Ga0105240_10417956
253 Ga0105240_10536841
254 Ga0105240_10579970
255 Ga0105245_10165379
256 Ga0105245_10507715
257 Ga0105243_10017159
258 Ga0105241_10035222
259 Ga0105242_10015540
260 Ga0105248_10002688
261 Ga0105248_10040133
262 Ga0105248_10526601
263 Ga0105248_10765663
264 Ga0105237_10007187
265 Ga0105237_10060622
266 Ga0105237_10423833
267 Ga0105238_10006019
268 Ga0105238_10074042
269 Ga0105238_10137445
270 Ga0105238_10919915
271 Ga0105239_10055433
272 Ga0157370_10019510
273 Ga0157370_10129353
274 Ga0157369_10046383
275 Ga0157369_10294831
276 Ga0157374_10345363
277 Ga0163162_10015339
278 Ga0163162_10025556
279 Ga0163162_10094695
280 Ga0163162_10243662
281 Ga0157372_10140509
282 Ga0157372_10187757
283 Ga0157375_10013599
284 Ga0163163_10361615
285 Ga0157379_10033149
286 Ga0157379_10066695
287 Ga0157379_10435727
288 Ga0213873_10021724
289 Ga0213872_10066017
290 Ga0213876_10000300
291 Ga0209026_1000953
292 Ga0209758_1000528
293 Ga0209050_1000141
294 Ga0209257_1000288
295 Ga0207705_10317557
296 Ga0207695_10002525
297 Ga0207695_10058932
298 Ga0207695_10120845
299 Ga0207695_10254098
300 Ga0207695_10384829
301 Ga0207693_10435417
302 Ga0207694_10046115
303 Ga0207694_10169647
304 Ga0207700_10683499
305 Ga0207644_10093889
306 Ga0207706_10094162
307 Ga0207686_10071897
308 Ga0207709_10038824
309 Ga0207704_10011881
310 Ga0207711_10008063
311 Ga0207711_10099863
312 Ga0207711_10121017
313 Ga0207711_10491993
314 Ga0207679_10044358
315 Ga0207667_10034822
316 Ga0207667_10159947
317 Ga0207651_10036567
318 Ga0207640_10383361
319 Ga0207677_10408734
320 Ga0207703_10036273
321 Ga0207639_10131798
322 Ga0207702_10008519
323 Ga0207702_10051415
324 Ga0207641_10038011
325 Ga0207648_10206739
326 Ga0207676_10098286
327 Ga0207676_10104056
328 Ga0207674_10000584
329 Ga0207683_10084644
330 Ga0207698_11016550
331 Ga0268266_10000005
332 Ga0268266_10065703
333 Ga0307517_10048660
334 Ga0265338_10017575
335 Ga0265338_10114961
336 Ga0265338_10245201
337 Ga0307511_10039667
338 Ga0265320_10000247
339 Ga0265325_10006084
340 Ga0265340_10041192
341 Ga0265327_10001088
342 Ga0265327_10002283
343 Ga0265327_10041554
344 Ga0265316_10031192
345 Ga0307513_10005639
346 Ga0265313_10008564
347 Ga0307416_100911029
348 Ga0307510_10010315
349 Ga0373930_0011879
350 Ga0373936_0111884
351 Ga0373945_0083379
352 Ga0373943_0102319
353 Ga0373955_0244439
354 Ga0373935_0012370
355 Ga0373935_0039326
356 Ga0373935_0052010
357 Ga0373933_0189366
358 Ga0373947_0006186
359 Ga0373937_0003197
360 Ga0373937_0372835
361 Ga0373937_0912205
362 Ga0373925_0009922
363 Ga0373925_0081466
364 Ga0373925_0150385
365 Ga0373925_0307746
366 Ga0436364_0660041
367 Ga0436365_0039319
368 Ga0436365_0464972
369 Ga0436365_0865950
370 Ga0436365_1490488
371 Ga0436360_0868039
372 Ga0436361_1111462
373 Ga0436361_1122798
374 Ga0436363_0563174
375 Ga0436362_0266238
376 Ga0495580_0323983
377 Ga0495664_0280561
378 Ga0495628_0071723
379 Ga0495642_0002044
380 Ga0495652_0185068
381 Ga0495668_0036057
382 Ga0495611_0007200
383 Ga0495625_0258944
384 Ga0495599_0355924
385 Ga0495669_0048170
386 Ga0495670_0185016
387 Ga0495674_0130772
388 Ga0495674_0774502
389 Ga0495672_0093601
390 Ga0495677_0190910
391 Ga0495602_0501353
392 Ga0496102_0126550
393 Ga0496107_0226837
394 Ga0496108_0013606
395 Ga0496109_0001563
396 Ga0496111_0185440
397 Ga0496112_0016880
398 Ga0496112_0100056
399 Ga0496112_0422669
400 Ga0496113_0026241
401 Ga0496115_0000663
402 Ga0496115_0298546
403 Ga0501035_0600826
404 nmdc:mga08x19_262172_c1
405 Ga0500641_0044815
406 Ga0500562_000241
407 Ga0500608_228040
408 Ga0500645_032820
409 2644000855
410 2644085403
411 2644342955
412 2644366255

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13409

GST_N_2

Glutathione S-transferase, N-terminal domain

35

99

0.9

PF13417

GST_N_3

Glutathione S-transferase, N-terminal domain

30

104

0.89

PF13410

GST_C_2

Glutathione S-transferase, C-terminal domain

145

216

0.86

PF02798

GST_N

Glutathione S-transferase, N-terminal domain

26

98

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ubl-assembly1.cif.gz_B crystal structure of glutathione transferase (target efi-501770) from leptospira interrogans with gsh bound 0.8666 34 246
4iji-assembly3.cif.gz_H crystal structure of a glutathione transferase family member from psuedomonas fluorescens pf-5, target efi-900011, with bound s-(propanoic acid)-glutathione 0.8546 36 241
3cbu-assembly1.cif.gz_A crystal structure of a putative glutathione s-transferase (reut_a1011) from ralstonia eutropha jmp134 at 2.05 a resolution 0.8527 35 250
4jed-assembly1.cif.gz_A-2 crystal structure of glutathione s-transferase mrad2831_1084 (target efi-507060) from methylobacterium radiotolerans jcm 2831, complex with glutathione sulfonate 0.85 36 241
4iji-assembly2.cif.gz_C crystal structure of a glutathione transferase family member from psuedomonas fluorescens pf-5, target efi-900011, with bound s-(propanoic acid)-glutathione 0.8479 37 241
ID Description Score Start End Superfamily
3zmkC01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9418 36 108 3.40.30.10
3zmkC01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8974 36 108 3.40.30.10
af_B8A514_42_123_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8758 34 106 3.40.30.10
4yh2C01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8656 36 108 3.40.30.10
4ielA01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8613 35 108 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A0Q8LYJ9-F1-model_v4 Glutathione S-transferase 0.9383 37 266 GO:0005737
GO:0016740
AF-A0A0Q8LYJ9-F1-model_v4 Glutathione S-transferase 0.9261 37 266 GO:0005737
GO:0016740
AF-A0A525L8X9-F1-model_v4 Glutathione S-transferase family protein 0.9193 19 278 GO:0005737
GO:0016740
AF-A0A7V4PCR7-F1-model_v4 Glutathione S-transferase family protein 0.9178 36 252 GO:0005737
GO:0016740
AF-A0A2D7C443-F1-model_v4 Glutathione S-transferase 0.9112 36 247 GO:0005737

Map