F328362

General Info

Members Datasets Scaffolds Average Seq Length
217 170 217 365

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100013482|Ga0070683_1000134824
Length 374
Sequence MSWLLAIGGFAMLVVLHEAGHFAAAKAVGMRVERFFLFFPPKLVSVRRGETEYGIGAIPLGGFVKITGMNPEEEIPPEVEDRAYYRQPVWKRIFVIAAGPFVNIALALILFFALAVGFGLDTGPTTTVGTVSPDLPAAKVLQPGDKLIAVDGKRVAGLPPERLADSVRRQVGTHECAGQPTDGCVATTAATLKVIRDGEPLTVRVKPVYSAPEQVPGQPAIEPRMVVGFGYEANRETVPAGEAASFAFDRLWYVTSQTATVFANIFNPEVRDQISGVVGATEVTRQSFEFDTRQAIGVLAVISLSLGLINLLPFLPLDGGHIFWALVEKIRGRPVALRIMERSGLVGFALVMILFVIGLENDIGRLTGDGFNVR

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
41 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
42 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
56 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
102 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
103 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
104 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
105 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
108 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
109 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
110 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
111 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
112 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
113 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
114 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
115 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
116 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
117 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
118 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
119 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
120 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
121 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
122 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
123 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
124 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
127 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
128 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
129 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
130 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
131 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
132 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
135 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
136 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
137 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
138 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
139 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
140 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
141 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
142 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
143 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
144 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
145 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
146 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
147 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
148 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
149 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
152 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
153 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
154 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
155 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
156 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
157 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
158 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
161 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
162 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
163 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
164 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
165 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
166 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
167 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
168 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
169 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
170 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.07
Nodule 0
Rhizoplane 7.37
Rhizosphere 86.64
Stem 0
Stem Tuber 0
Unclassified 0.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100002820 3300005329 Bacteria 13903
2 Ga0070683_100013482 3300005329 Bacteria 7130
3 Ga0070683_100405900 3300005329 Bacteria 1299
4 Ga0070666_10117564 3300005335 Bacteria 1842
5 Ga0070680_100133136 3300005336 Bacteria 2081
6 Ga0070682_100010881 3300005337 Bacteria 5180
7 Ga0070660_100004640 3300005339 Bacteria 9512
8 Ga0070691_10000021 3300005341 Bacteria 45268
9 Ga0070661_100081349 3300005344 Bacteria 2391
10 Ga0070692_10016349 3300005345 Bacteria 3528
11 Ga0070668_100018763 3300005347 Bacteria 5195
12 Ga0070668_100041677 3300005347 Bacteria 3518
13 Ga0070669_100016008 3300005353 Bacteria 5351
14 Ga0070675_100013602 3300005354 Bacteria 6399
15 Ga0070673_100026271 3300005364 Bacteria 4299
16 Ga0070659_100000613 3300005366 Bacteria 26154
17 Ga0070667_100001804 3300005367 Bacteria 19049
18 Ga0070703_10022091 3300005406 Bacteria 1864
19 Ga0070713_100059294 3300005436 Bacteria 3196
20 Ga0070711_100127335 3300005439 Bacteria 1892
21 Ga0070700_100000753 3300005441 Bacteria 15970
22 Ga0070694_100126579 3300005444 Bacteria 1840
23 Ga0070663_100001567 3300005455 Bacteria 12581
24 Ga0070662_100010626 3300005457 Bacteria 6053
25 Ga0068867_100011324 3300005459 Bacteria 6293
26 Ga0070684_100033217 3300005535 Bacteria 4404
27 Ga0070684_100139653 3300005535 Bacteria 2190
28 Ga0068853_100030801 3300005539 Bacteria 4533
29 Ga0070672_100000001 3300005543 Bacteria 204624
30 Ga0070672_100004269 3300005543 Bacteria 9343
31 Ga0070686_100026674 3300005544 Bacteria 3489
32 Ga0070665_100020049 3300005548 Bacteria 6713
33 Ga0070665_100024849 3300005548 Bacteria 6036
34 Ga0070665_100204524 3300005548 Bacteria 1975
35 Ga0070665_100252905 3300005548 Bacteria 1763
36 Ga0068855_100184151 3300005563 Bacteria 2360
37 Ga0070664_100014029 3300005564 Bacteria 6534
38 Ga0068857_100088582 3300005577 Bacteria 2769
39 Ga0068857_100202638 3300005577 Bacteria 1809
40 Ga0068854_100012201 3300005578 Bacteria 5623
41 Ga0068856_100019972 3300005614 Bacteria 6504
42 Ga0068852_100000056 3300005616 Bacteria 76111
43 Ga0068852_100047078 3300005616 Bacteria 3677
44 Ga0068864_100251827 3300005618 Bacteria 1640
45 Ga0068858_100000097 3300005842 Bacteria 91503
46 Ga0068860_100031998 3300005843 Bacteria 5057
47 Ga0068862_100001600 3300005844 Bacteria 20633
48 Ga0081455_10086720 3300005937 Bacteria 2549
49 Ga0081455_10117284 3300005937 Bacteria 2104
50 Ga0081539_10004211 3300005985 Bacteria 16224
51 Ga0075365_10012730 3300006038 Bacteria 5006
52 Ga0075365_10022740 3300006038 Bacteria 3932
53 Ga0075365_10046782 3300006038 Bacteria 2842
54 Ga0075365_10210627 3300006038 Bacteria 1363
55 Ga0075363_100001023 3300006048 Bacteria 10038
56 Ga0075363_100031284 3300006048 Bacteria 2758
57 Ga0075363_100057145 3300006048 Bacteria 2093
58 Ga0075363_100106737 3300006048 Bacteria 1554
59 Ga0070715_10000021 3300006163 Bacteria 119283
60 Ga0075428_100090620 3300006844 Bacteria 3336
61 Ga0075431_100011649 3300006847 Bacteria 8871
62 Ga0075431_100193392 3300006847 Bacteria 2084
63 Ga0075429_100106329 3300006880 Bacteria 2451
64 Ga0075435_100251965 3300007076 Bacteria 1503
65 Ga0111539_10069232 3300009094 Bacteria 4167
66 Ga0105245_10000141 3300009098 Bacteria 68413
67 Ga0105245_10277671 3300009098 Bacteria 1636
68 Ga0105247_10000278 3300009101 Bacteria 47180
69 Ga0105243_10001034 3300009148 Bacteria 25569
70 Ga0105242_10000921 3300009176 Bacteria 22877
71 Ga0105248_10000020 3300009177 Bacteria 284637
72 Ga0105248_10533915 3300009177 Bacteria 1323
73 Ga0105249_10258549 3300009553 Bacteria 1729
74 Ga0105239_10054994 3300010375 Bacteria 4366
75 Ga0105246_10056449 3300011119 Bacteria 2714
76 Ga0157371_10072712 3300013102 Bacteria 2435
77 Ga0157370_10042930 3300013104 Bacteria 4354
78 Ga0157370_10052555 3300013104 Bacteria 3890
79 Ga0157369_10000074 3300013105 Bacteria 136668
80 Ga0157378_10015799 3300013297 Bacteria 6611
81 Ga0157375_10000349 3300013308 Bacteria 41764
82 Ga0157375_10018427 3300013308 Bacteria 6331
83 Ga0157379_10066971 3300014968 Bacteria 3211
84 Ga0163161_10031232 3300017792 Bacteria 3794
85 Ga0213875_10003174 3300021388 Bacteria 9446
86 Ga0207710_10001168 3300025900 Bacteria 13367
87 Ga0207688_10002645 3300025901 Bacteria 9692
88 Ga0207680_10095016 3300025903 Bacteria 1904
89 Ga0207685_10000028 3300025905 Bacteria 97935
90 Ga0207645_10232401 3300025907 Bacteria 1217
91 Ga0207707_10339650 3300025912 Bacteria 1295
92 Ga0207663_10198822 3300025916 Bacteria 1444
93 Ga0207662_10129026 3300025918 Bacteria 1592
94 Ga0207657_10000636 3300025919 Bacteria 37227
95 Ga0207649_10041170 3300025920 Bacteria 2811
96 Ga0207659_10143487 3300025926 Bacteria 1856
97 Ga0207687_10000036 3300025927 Bacteria 121934
98 Ga0207700_10175261 3300025928 Bacteria 1792
99 Ga0207664_10155442 3300025929 Bacteria 1947
100 Ga0207690_10004433 3300025932 Bacteria 8285
101 Ga0207706_10011653 3300025933 Bacteria 8014
102 Ga0207686_10002230 3300025934 Bacteria 10644
103 Ga0207686_10127361 3300025934 Bacteria 1742
104 Ga0207709_10017728 3300025935 Bacteria 3979
105 Ga0207670_10061576 3300025936 Bacteria 2561
106 Ga0207669_10049991 3300025937 Bacteria 2496
107 Ga0207691_10000529 3300025940 Bacteria 38127
108 Ga0207691_10008572 3300025940 Bacteria 9814
109 Ga0207711_10000006 3300025941 Bacteria 792692
110 Ga0207661_10002559 3300025944 Bacteria 12512
111 Ga0207661_10066790 3300025944 Bacteria 2922
112 Ga0207712_10226273 3300025961 Bacteria 1498
113 Ga0207640_10004587 3300025981 Bacteria 7493
114 Ga0207677_10071945 3300026023 Bacteria 2442
115 Ga0207703_10000103 3300026035 Bacteria 99918
116 Ga0207678_10000496 3300026067 Bacteria 35801
117 Ga0207708_10003109 3300026075 Bacteria 12217
118 Ga0207708_10204147 3300026075 Bacteria 1578
119 Ga0207708_10305194 3300026075 Bacteria 1295
120 Ga0207702_10004972 3300026078 Bacteria 11680
121 Ga0207648_10111895 3300026089 Bacteria 2397
122 Ga0207676_10204292 3300026095 Bacteria 1748
123 Ga0207674_10037455 3300026116 Bacteria 5044
124 Ga0207674_10237466 3300026116 Bacteria 1770
125 Ga0207698_10000101 3300026142 Bacteria 54530
126 Ga0207698_10075174 3300026142 Bacteria 2698
127 Ga0268266_10007058 3300028379 Bacteria 10199
128 Ga0268266_10122307 3300028379 Bacteria 2317
129 Ga0268265_10064807 3300028380 Bacteria 2816
130 Ga0268264_10060703 3300028381 Bacteria 3169
131 Ga0316574_0074443 3300035398 Bacteria 2149
132 Ga0373937_0012237 3300036401 Bacteria 7538
133 Ga0316584_0120606 3300036712 Bacteria 1960
134 Ga0436364_0731307 3300037853 Bacteria 9432
135 Ga0451807_0116651 3300041486 Bacteria 3251
136 Ga0466966_0008464 3300044684 Bacteria 6812
137 Ga0466961_0008275 3300044693 Bacteria 6626
138 Ga0466963_0036358 3300044694 Bacteria 3212
139 Ga0466957_0127769 3300044842 Bacteria 1625
140 Ga0466959_0048358 3300045049 Bacteria 3125
141 Ga0466967_0093872 3300045976 Bacteria 2731
142 Ga0495592_0066099 3300046454 Bacteria 2647
143 Ga0495592_0101936 3300046454 Bacteria 2045
144 Ga0495603_0009640 3300046455 Bacteria 5838
145 Ga0495629_0001073 3300046459 Bacteria 21818
146 Ga0495629_0136451 3300046459 Bacteria 1708
147 Ga0495641_0001404 3300046461 Bacteria 20498
148 Ga0495653_0039601 3300046463 Bacteria 3691
149 Ga0495653_0042027 3300046463 Bacteria 3564
150 Ga0495594_0000011 3300046499 Bacteria 118444
151 Ga0495606_0000586 3300046507 Bacteria 57795
152 Ga0495608_0000007 3300046511 Bacteria 313495
153 Ga0495644_0000176 3300046523 Bacteria 30116
154 Ga0495586_0001171 3300046535 Bacteria 14697
155 Ga0495598_0003115 3300046537 Bacteria 3494
156 Ga0495645_0000984 3300046543 Bacteria 19435
157 Ga0495622_0000387 3300046557 Bacteria 30369
158 Ga0495667_0095753 3300046559 Bacteria 1922
159 Ga0495656_0066918 3300046615 Unclassified 1584
160 Ga0495634_0000031 3300046642 Bacteria 110396
161 Ga0495634_0002062 3300046642 Bacteria 16995
162 Ga0495625_0001050 3300046660 Bacteria 36223
163 Ga0495657_0000001 3300046675 Bacteria 445641
164 Ga0495658_0007677 3300046683 Bacteria 5345
165 Ga0495613_0157493 3300046689 Bacteria 1617
166 Ga0495600_0001910 3300046809 Bacteria 11700
167 Ga0495604_0000050 3300047317 Bacteria 108094
168 Ga0495672_0042010 3300047320 Bacteria 2760
169 Ga0495676_0012335 3300047321 Bacteria 7698
170 Ga0495680_0000241 3300047322 Bacteria 60168
171 Ga0495680_0102314 3300047322 Bacteria 2133
172 Ga0495675_0000453 3300047444 Bacteria 27185
173 Ga0495686_0012287 3300047472 Bacteria 5995
174 Ga0495686_0013033 3300047472 Bacteria 5789
175 Ga0495602_0171572 3300048088 Bacteria 1683
176 Ga0496100_0000001 3300048903 Bacteria 530179
177 Ga0496101_0000004 3300048904 Bacteria 331599
178 Ga0496101_0111484 3300048904 Bacteria 2060
179 Ga0496106_0000414 3300048909 Bacteria 30298
180 Ga0496107_0000005 3300048910 Bacteria 281747
181 Ga0496108_0017030 3300048911 Bacteria 5941
182 Ga0496108_0079953 3300048911 Bacteria 2768
183 Ga0496109_0001088 3300048912 Bacteria 22576
184 Ga0496109_0010630 3300048912 Bacteria 7872
185 Ga0496110_0000242 3300048913 Bacteria 35454
186 Ga0496110_0001010 3300048913 Bacteria 19810
187 Ga0496111_0000316 3300048914 Bacteria 23885
188 Ga0496111_0009912 3300048914 Bacteria 6368
189 Ga0496111_0061676 3300048914 Bacteria 2718
190 Ga0496115_0000162 3300048918 Bacteria 62522
191 Ga0501041_0102314 3300049577 Bacteria 1774
192 Ga0501042_0027573 3300049578 Bacteria 3995
193 Ga0501068_0058075 3300049584 Bacteria 2347
194 Ga0501069_0033593 3300049585 Bacteria 2826
195 Ga0501070_0038076 3300049586 Bacteria 4013
196 Ga0501070_0046093 3300049586 Bacteria 3625
197 Ga0501070_0066727 3300049586 Bacteria 2980
198 Ga0501071_0171302 3300049587 Bacteria 1625
199 Ga0501072_0019676 3300049588 Bacteria 5222
200 Ga0501074_0010072 3300049590 Bacteria 6863
201 Ga0501075_0187073 3300049591 Bacteria 1580
202 Ga0501076_0062300 3300049592 Bacteria 2970
203 Ga0501080_0030466 3300049742 Bacteria 5026
204 nmdc:mga03n38_16305_c1 3300050490 Bacteria 2888
205 nmdc:mga0yw44_11083_c1 3300050492 Bacteria 4634
206 nmdc:mga0yw44_130396_c1 3300050492 Bacteria 1627
207 nmdc:mga0qj67_14329_c1 3300050509 Bacteria 5991
208 nmdc:mga08y16_196970_c1 3300050511 Bacteria 2088
209 nmdc:mga08y16_721778_c1 3300050511 Bacteria 995
210 nmdc:mga0rr50_231122_c1 3300050513 Bacteria 1530
211 Ga0495612_0011027 3300053078 Bacteria 3649
212 Ga0495655_0000539 3300053083 Bacteria 6211
213 Ga0495595_0000002 3300053084 Bacteria 445641
214 Ga0495619_0000010 3300053085 Bacteria 302390
215 Ga0495619_0000276 3300053085 Bacteria 36931
216 Ga0501084_0225899 3300054114 Bacteria 1580
217 Ga0501082_0144359 3300060353 Bacteria 2066

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050511 nmdc:mga08y16_721778_c1 nmdc:mga08y16_721778_c1_119_982 286
2 3300025907 Ga0207645_10232401 Ga0207645_102324011 288
3 3300050490 nmdc:mga03n38_16305_c1 nmdc:mga03n38_16305_c1_11_931 295
4 3300049578 Ga0501042_0027573 Ga0501042_0027573_1982_3073 300
5 3300005985 Ga0081539_10004211 Ga0081539_100042118 306
6 3300050492 nmdc:mga0yw44_130396_c1 nmdc:mga0yw44_130396_c1_23_985 309
7 3300046454 Ga0495592_0101936 Ga0495592_0101936_1016_2023 334
8 3300047317 Ga0495604_0000050 Ga0495604_0000050_82143_83234 345
9 3300047472 Ga0495686_0012287 Ga0495686_0012287_389_1462 346
10 3300046660 Ga0495625_0001050 Ga0495625_0001050_9770_10861 348
11 3300005535 Ga0070684_100033217 Ga0070684_1000332175 350
12 3300005577 Ga0068857_100202638 Ga0068857_1002026382 350
13 3300048913 Ga0496110_0001010 Ga0496110_0001010_2548_3642 350
14 3300048914 Ga0496111_0009912 Ga0496111_0009912_227_1321 350
15 3300005329 Ga0070683_100405900 Ga0070683_1004059001 352
16 3300005937 Ga0081455_10117284 Ga0081455_101172842 352
17 3300025912 Ga0207707_10339650 Ga0207707_103396502 352
18 3300025944 Ga0207661_10066790 Ga0207661_100667902 352
19 3300026116 Ga0207674_10237466 Ga0207674_102374662 352
20 3300049591 Ga0501075_0187073 Ga0501075_0187073_298_1368 353
21 3300009098 Ga0105245_10277671 Ga0105245_102776712 354
22 3300021388 Ga0213875_10003174 Ga0213875_100031747 354
23 3300026075 Ga0207708_10204147 Ga0207708_102041472 354
24 3300037853 Ga0436364_0731307 Ga0436364_0731307_4154_5254 354
25 3300046615 Ga0495656_0066918 Ga0495656_0066918_64_1140 354
26 3300006844 Ga0075428_100090620 Ga0075428_1000906202 355
27 3300006847 Ga0075431_100011649 Ga0075431_1000116496 355
28 3300006847 Ga0075431_100193392 Ga0075431_1001933922 355
29 3300006880 Ga0075429_100106329 Ga0075429_1001063292 355
30 3300046461 Ga0495641_0001404 Ga0495641_0001404_5691_6770 355
31 3300046683 Ga0495658_0007677 Ga0495658_0007677_27_1106 355
32 3300047472 Ga0495686_0013033 Ga0495686_0013033_1511_2590 355
33 3300049577 Ga0501041_0102314 Ga0501041_0102314_140_1216 355
34 3300060353 Ga0501082_0144359 Ga0501082_0144359_621_1697 355
35 3300044684 Ga0466966_0008464 Ga0466966_0008464_5450_6523 356
36 3300044693 Ga0466961_0008275 Ga0466961_0008275_4857_5930 356
37 3300045049 Ga0466959_0048358 Ga0466959_0048358_1606_2679 356
38 3300050509 nmdc:mga0qj67_14329_c1 nmdc:mga0qj67_14329_c1_68_1150 359
39 3300005544 Ga0070686_100026674 Ga0070686_1000266743 361
40 3300046463 Ga0495653_0039601 Ga0495653_0039601_2165_3259 361
41 3300005548 Ga0070665_100252905 Ga0070665_1002529052 362
42 3300049592 Ga0501076_0062300 Ga0501076_0062300_32_1120 362
43 3300005329 Ga0070683_100002820 Ga0070683_1000028203 363
44 3300005329 Ga0070683_100013482 Ga0070683_1000134824 363
45 3300005335 Ga0070666_10117564 Ga0070666_101175642 363
46 3300005336 Ga0070680_100133136 Ga0070680_1001331362 363
47 3300005337 Ga0070682_100010881 Ga0070682_1000108815 363
48 3300005339 Ga0070660_100004640 Ga0070660_1000046402 363
49 3300005341 Ga0070691_10000021 Ga0070691_1000002129 363
50 3300005344 Ga0070661_100081349 Ga0070661_1000813492 363
51 3300005345 Ga0070692_10016349 Ga0070692_100163492 363
52 3300005347 Ga0070668_100018763 Ga0070668_1000187635 363
53 3300005347 Ga0070668_100041677 Ga0070668_1000416773 363
54 3300005353 Ga0070669_100016008 Ga0070669_1000160085 363
55 3300005354 Ga0070675_100013602 Ga0070675_1000136023 363
56 3300005364 Ga0070673_100026271 Ga0070673_1000262711 363
57 3300005366 Ga0070659_100000613 Ga0070659_10000061323 363
58 3300005367 Ga0070667_100001804 Ga0070667_10000180413 363
59 3300005406 Ga0070703_10022091 Ga0070703_100220912 363
60 3300005436 Ga0070713_100059294 Ga0070713_1000592942 363
61 3300005439 Ga0070711_100127335 Ga0070711_1001273351 363
62 3300005441 Ga0070700_100000753 Ga0070700_1000007538 363
63 3300005444 Ga0070694_100126579 Ga0070694_1001265792 363
64 3300005455 Ga0070663_100001567 Ga0070663_1000015674 363
65 3300005457 Ga0070662_100010626 Ga0070662_1000106265 363
66 3300005459 Ga0068867_100011324 Ga0068867_1000113242 363
67 3300005535 Ga0070684_100139653 Ga0070684_1001396532 363
68 3300005539 Ga0068853_100030801 Ga0068853_1000308012 363
69 3300005543 Ga0070672_100000001 Ga0070672_10000000110 363
70 3300005543 Ga0070672_100004269 Ga0070672_1000042694 363
71 3300005548 Ga0070665_100020049 Ga0070665_1000200492 363
72 3300005548 Ga0070665_100024849 Ga0070665_1000248492 363
73 3300005548 Ga0070665_100204524 Ga0070665_1002045242 363
74 3300005563 Ga0068855_100184151 Ga0068855_1001841512 363
75 3300005564 Ga0070664_100014029 Ga0070664_1000140295 363
76 3300005577 Ga0068857_100088582 Ga0068857_1000885822 363
77 3300005578 Ga0068854_100012201 Ga0068854_1000122013 363
78 3300005614 Ga0068856_100019972 Ga0068856_1000199724 363
79 3300005616 Ga0068852_100000056 Ga0068852_10000005629 363
80 3300005616 Ga0068852_100047078 Ga0068852_1000470783 363
81 3300005618 Ga0068864_100251827 Ga0068864_1002518272 363
82 3300005842 Ga0068858_100000097 Ga0068858_10000009718 363
83 3300005843 Ga0068860_100031998 Ga0068860_1000319982 363
84 3300005844 Ga0068862_100001600 Ga0068862_10000160015 363
85 3300005937 Ga0081455_10086720 Ga0081455_100867202 363
86 3300006038 Ga0075365_10012730 Ga0075365_100127304 363
87 3300006038 Ga0075365_10022740 Ga0075365_100227403 363
88 3300006038 Ga0075365_10046782 Ga0075365_100467822 363
89 3300006038 Ga0075365_10210627 Ga0075365_102106272 363
90 3300006048 Ga0075363_100001023 Ga0075363_1000010238 363
91 3300006048 Ga0075363_100031284 Ga0075363_1000312842 363
92 3300006048 Ga0075363_100057145 Ga0075363_1000571451 363
93 3300006048 Ga0075363_100106737 Ga0075363_1001067372 363
94 3300006163 Ga0070715_10000021 Ga0070715_1000002195 363
95 3300007076 Ga0075435_100251965 Ga0075435_1002519651 363
96 3300009094 Ga0111539_10069232 Ga0111539_100692322 363
97 3300009098 Ga0105245_10000141 Ga0105245_1000014148 363
98 3300009101 Ga0105247_10000278 Ga0105247_1000027831 363
99 3300009148 Ga0105243_10001034 Ga0105243_100010344 363
100 3300009176 Ga0105242_10000921 Ga0105242_1000092117 363
101 3300009177 Ga0105248_10000020 Ga0105248_1000002032 363
102 3300009177 Ga0105248_10533915 Ga0105248_105339152 363
103 3300009553 Ga0105249_10258549 Ga0105249_102585492 363
104 3300010375 Ga0105239_10054994 Ga0105239_100549944 363
105 3300011119 Ga0105246_10056449 Ga0105246_100564492 363
106 3300013102 Ga0157371_10072712 Ga0157371_100727122 363
107 3300013104 Ga0157370_10042930 Ga0157370_100429302 363
108 3300013104 Ga0157370_10052555 Ga0157370_100525553 363
109 3300013105 Ga0157369_10000074 Ga0157369_10000074121 363
110 3300013297 Ga0157378_10015799 Ga0157378_100157992 363
111 3300013308 Ga0157375_10000349 Ga0157375_1000034928 363
112 3300013308 Ga0157375_10018427 Ga0157375_100184272 363
113 3300014968 Ga0157379_10066971 Ga0157379_100669712 363
114 3300017792 Ga0163161_10031232 Ga0163161_100312323 363
115 3300025900 Ga0207710_10001168 Ga0207710_100011683 363
116 3300025901 Ga0207688_10002645 Ga0207688_100026455 363
117 3300025903 Ga0207680_10095016 Ga0207680_100950162 363
118 3300025905 Ga0207685_10000028 Ga0207685_1000002830 363
119 3300025916 Ga0207663_10198822 Ga0207663_101988222 363
120 3300025918 Ga0207662_10129026 Ga0207662_101290262 363
121 3300025919 Ga0207657_10000636 Ga0207657_100006362 363
122 3300025920 Ga0207649_10041170 Ga0207649_100411702 363
123 3300025926 Ga0207659_10143487 Ga0207659_101434872 363
124 3300025927 Ga0207687_10000036 Ga0207687_1000003630 363
125 3300025928 Ga0207700_10175261 Ga0207700_101752612 363
126 3300025929 Ga0207664_10155442 Ga0207664_101554422 363
127 3300025932 Ga0207690_10004433 Ga0207690_100044337 363
128 3300025933 Ga0207706_10011653 Ga0207706_100116533 363
129 3300025934 Ga0207686_10002230 Ga0207686_100022307 363
130 3300025934 Ga0207686_10127361 Ga0207686_101273612 363
131 3300025935 Ga0207709_10017728 Ga0207709_100177283 363
132 3300025936 Ga0207670_10061576 Ga0207670_100615762 363
133 3300025937 Ga0207669_10049991 Ga0207669_100499912 363
134 3300025940 Ga0207691_10000529 Ga0207691_1000052934 363
135 3300025940 Ga0207691_10008572 Ga0207691_100085728 363
136 3300025941 Ga0207711_10000006 Ga0207711_10000006343 363
137 3300025944 Ga0207661_10002559 Ga0207661_100025593 363
138 3300025961 Ga0207712_10226273 Ga0207712_102262732 363
139 3300025981 Ga0207640_10004587 Ga0207640_100045873 363
140 3300026023 Ga0207677_10071945 Ga0207677_100719451 363
141 3300026035 Ga0207703_10000103 Ga0207703_1000010329 363
142 3300026067 Ga0207678_10000496 Ga0207678_1000049627 363
143 3300026075 Ga0207708_10003109 Ga0207708_100031094 363
144 3300026075 Ga0207708_10305194 Ga0207708_103051942 363
145 3300026078 Ga0207702_10004972 Ga0207702_100049727 363
146 3300026089 Ga0207648_10111895 Ga0207648_101118952 363
147 3300026095 Ga0207676_10204292 Ga0207676_102042922 363
148 3300026116 Ga0207674_10037455 Ga0207674_100374552 363
149 3300026142 Ga0207698_10000101 Ga0207698_1000010129 363
150 3300026142 Ga0207698_10075174 Ga0207698_100751742 363
151 3300028379 Ga0268266_10007058 Ga0268266_100070582 363
152 3300028379 Ga0268266_10122307 Ga0268266_101223072 363
153 3300028380 Ga0268265_10064807 Ga0268265_100648072 363
154 3300028381 Ga0268264_10060703 Ga0268264_100607032 363
155 3300035398 Ga0316574_0074443 Ga0316574_0074443_76_1200 363
156 3300036401 Ga0373937_0012237 Ga0373937_0012237_5788_6879 363
157 3300036712 Ga0316584_0120606 Ga0316584_0120606_158_1282 363
158 3300041486 Ga0451807_0116651 Ga0451807_0116651_84_1175 363
159 3300044694 Ga0466963_0036358 Ga0466963_0036358_1632_2726 363
160 3300044842 Ga0466957_0127769 Ga0466957_0127769_118_1212 363
161 3300045976 Ga0466967_0093872 Ga0466967_0093872_1187_2281 363
162 3300046454 Ga0495592_0066099 Ga0495592_0066099_1182_2276 363
163 3300046455 Ga0495603_0009640 Ga0495603_0009640_553_1644 363
164 3300046459 Ga0495629_0001073 Ga0495629_0001073_8523_9617 363
165 3300046459 Ga0495629_0136451 Ga0495629_0136451_246_1337 363
166 3300046463 Ga0495653_0042027 Ga0495653_0042027_1510_2601 363
167 3300046499 Ga0495594_0000011 Ga0495594_0000011_97783_98877 363
168 3300046507 Ga0495606_0000586 Ga0495606_0000586_20041_21135 363
169 3300046511 Ga0495608_0000007 Ga0495608_0000007_26014_27108 363
170 3300046523 Ga0495644_0000176 Ga0495644_0000176_7606_8697 363
171 3300046535 Ga0495586_0001171 Ga0495586_0001171_11573_12664 363
172 3300046537 Ga0495598_0003115 Ga0495598_0003115_1836_2927 363
173 3300046543 Ga0495645_0000984 Ga0495645_0000984_11412_12506 363
174 3300046557 Ga0495622_0000387 Ga0495622_0000387_6106_7200 363
175 3300046559 Ga0495667_0095753 Ga0495667_0095753_579_1670 363
176 3300046642 Ga0495634_0000031 Ga0495634_0000031_88260_89351 363
177 3300046642 Ga0495634_0002062 Ga0495634_0002062_14190_15281 363
178 3300046675 Ga0495657_0000001 Ga0495657_0000001_158160_159254 363
179 3300046689 Ga0495613_0157493 Ga0495613_0157493_333_1427 363
180 3300046809 Ga0495600_0001910 Ga0495600_0001910_4270_5364 363
181 3300047320 Ga0495672_0042010 Ga0495672_0042010_362_1468 363
182 3300047321 Ga0495676_0012335 Ga0495676_0012335_4410_5504 363
183 3300047322 Ga0495680_0000241 Ga0495680_0000241_2053_3144 363
184 3300047322 Ga0495680_0102314 Ga0495680_0102314_431_1522 363
185 3300047444 Ga0495675_0000453 Ga0495675_0000453_14819_15913 363
186 3300048088 Ga0495602_0171572 Ga0495602_0171572_546_1640 363
187 3300048903 Ga0496100_0000001 Ga0496100_0000001_507897_508988 363
188 3300048904 Ga0496101_0000004 Ga0496101_0000004_309249_310340 363
189 3300048904 Ga0496101_0111484 Ga0496101_0111484_34_1158 363
190 3300048909 Ga0496106_0000414 Ga0496106_0000414_8014_9105 363
191 3300048910 Ga0496107_0000005 Ga0496107_0000005_21260_22351 363
192 3300048911 Ga0496108_0017030 Ga0496108_0017030_603_1697 363
193 3300048911 Ga0496108_0079953 Ga0496108_0079953_1361_2485 363
194 3300048912 Ga0496109_0001088 Ga0496109_0001088_13066_14160 363
195 3300048912 Ga0496109_0010630 Ga0496109_0010630_4794_5918 363
196 3300048913 Ga0496110_0000242 Ga0496110_0000242_9683_10777 363
197 3300048914 Ga0496111_0000316 Ga0496111_0000316_16141_17235 363
198 3300048914 Ga0496111_0061676 Ga0496111_0061676_307_1431 363
199 3300048918 Ga0496115_0000162 Ga0496115_0000162_37515_38606 363
200 3300049584 Ga0501068_0058075 Ga0501068_0058075_782_1906 363
201 3300049585 Ga0501069_0033593 Ga0501069_0033593_344_1468 363
202 3300049586 Ga0501070_0038076 Ga0501070_0038076_1576_2676 363
203 3300049586 Ga0501070_0046093 Ga0501070_0046093_968_2092 363
204 3300049586 Ga0501070_0066727 Ga0501070_0066727_1188_2312 363
205 3300049587 Ga0501071_0171302 Ga0501071_0171302_430_1554 363
206 3300049588 Ga0501072_0019676 Ga0501072_0019676_3170_4294 363
207 3300049590 Ga0501074_0010072 Ga0501074_0010072_5425_6549 363
208 3300049742 Ga0501080_0030466 Ga0501080_0030466_3515_4639 363
209 3300050492 nmdc:mga0yw44_11083_c1 nmdc:mga0yw44_11083_c1_2400_3524 363
210 3300050511 nmdc:mga08y16_196970_c1 nmdc:mga08y16_196970_c1_253_1377 363
211 3300050513 nmdc:mga0rr50_231122_c1 nmdc:mga0rr50_231122_c1_66_1157 363
212 3300053078 Ga0495612_0011027 Ga0495612_0011027_399_1490 363
213 3300053083 Ga0495655_0000539 Ga0495655_0000539_3338_4432 363
214 3300053084 Ga0495595_0000002 Ga0495595_0000002_286388_287482 363
215 3300053085 Ga0495619_0000010 Ga0495619_0000010_23076_24173 363
216 3300053085 Ga0495619_0000276 Ga0495619_0000276_11257_12351 363
217 3300054114 Ga0501084_0225899 Ga0501084_0225899_408_1532 363

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02163

Peptidase_M50

Peptidase family M50

5

354

0.98

PF00595

PDZ

PDZ domain

114

173

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3wkm-assembly1.cif.gz_A the periplasmic pdz tandem fragment of the rsep homologue from aquifex aeolicus in complex with the fab fragment 0.8858 119 221
3i1e-assembly2.cif.gz_B crystal structure of the pdz domain of the sdrc-like protein (lin2157) from listeria innocua, northeast structural genomics consortium target lkr136c 0.8596 123 220
3i18-assembly1.cif.gz_A crystal structure of the pdz domain of the sdrc-like protein (lmo2051) from listeria monocytogenes, northeast structural genomics consortium target lmr166b 0.8414 122 220
2kjk-assembly1.cif.gz_A solution structure of the second domain of the listeria protein lin2157, northeast structural genomics consortium target lkr136b 0.8381 121 221
6icc-assembly1.cif.gz_A the nz-1 fab complexed with the pdz tandem fragment of a. aeolicus s2p homolog with the pa12 tag inserted between the residues 181 and 186 0.8044 119 223
ID Description Score Start End Superfamily
3wkmB02 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.8303 123 226 2.30.42.10
af_I1LRP6_205_299_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.8256 120 221 2.30.42.10
3wkmB02 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.812 123 226 2.30.42.10
3i18A00 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.795 124 220 2.30.42.10
af_O53340_130_222_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.785 116 225 2.30.42.10
ID Description Score Start End GO Terms
AF-A0A496MTS6-F1-model_v4 Zinc metalloprotease Rip1 0.962 4 110 GO:0004222
GO:0006508
GO:0016020
AF-A0A3B8M3T5-F1-model_v4 Peptidase M50 domain-containing protein 0.9555 4 95 GO:0004222
GO:0006508
GO:0016020
AF-A0A356TKY7-F1-model_v4 RIP metalloprotease RseP 0.9414 1 105 GO:0004222
GO:0006508
GO:0016020
AF-A0A6J4R8B5-F1-model_v4 Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage 0.9344 1 110 GO:0004222
GO:0006508
GO:0016020
GO:0051301
AF-X8ASX6-F1-model_v4 deleted 0.927 4 117

Feature Viewer

pLDDT pTM Quality
81.25 0.72 High
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Predicted Structure (AlphaFold2)

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