F328533

General Info

Members Datasets Scaffolds Average Seq Length
217 154 434 346

Family's Representative Sequence

Representative Sequence 3300005547|Ga0070693_100085505|Ga0070693_1000855051
Length 394
Sequence MKFLLYGATGYTGRLILERCLSRGLHPVLGGRGEPVRVLAESHGLEARVADLENAPLLRRSLDGVGAVLHCAGPFSRTSKPMAEACMAAGVHYLDITGEIGVFEALAACADAARVAGVMLLPGVGFDVVPSDCLAAHLKRRLPDASWLKLAFESTGGLSRGTATTMVENVGRGGAIRRNGRILPVAAAWKTRVVDLGAGPVSVTSIPWGDVATAWYSTGIPDIEVYTRMSAGRRRALIATRYLGRLLATRPVQRWLQSRIRSAAPGPVERARVQGRSRILGEAGNAAGSVVRSRLSGPEGYTLTMYSAVAAVERVLAGQAKPGFQTPSLAFGPDFVLAVEGVSREDLAGSGCGLPPGFHSGFGPSASRRTARAVALITAARCAASALETSSLGR

Samples

Sample ID Description Type Environment
1 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
42 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
46 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
64 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
65 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
90 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
91 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
92 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
93 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
94 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
95 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
96 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
97 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
98 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
99 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
100 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
101 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
104 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
105 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
106 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
107 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
108 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
109 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
110 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
115 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
116 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
117 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
118 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
119 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
120 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
121 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
122 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
123 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
124 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
125 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
126 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
127 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
128 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
129 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
130 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
131 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
132 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
133 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
134 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
135 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
145 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
146 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
149 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
150 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
151 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
152 2902330777 Methylobacterium sp. 2A Isolate Unclassified
153 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
154 2928125067 Methylobacterium sp. 1973 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.7
Metatranscriptomes 0
Isolates 2.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.46
Nodule 0
Rhizoplane 4.15
Rhizosphere 93.09
Stem 0
Stem Tuber 0
Unclassified 12.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070693_100085505 3300005547 Unclassified 1890
2 rootH1_10018325 3300003323 Bacteria 17281
3 JGI25404J52841_10000130 3300003659 Bacteria 7888
4 JGI25404J52841_10000591 3300003659 Bacteria 5412
5 JGI25404J52841_10002264 3300003659 Bacteria 3618
6 Ga0070683_100116139 3300005329 Bacteria 2527
7 Ga0070682_100000035 3300005337 Bacteria 150016
8 Ga0070682_100026671 3300005337 Bacteria 3460
9 Ga0068868_100122220 3300005338 Unclassified 2125
10 Ga0070689_100000748 3300005340 Bacteria 19835
11 Ga0070691_10100611 3300005341 Unclassified 1435
12 Ga0070687_100079697 3300005343 Bacteria 1783
13 Ga0070687_100133583 3300005343 Bacteria 1436
14 Ga0070692_10172645 3300005345 Bacteria 1247
15 Ga0070669_100282582 3300005353 Unclassified 1330
16 Ga0070673_100063525 3300005364 Bacteria 2938
17 Ga0070673_100169283 3300005364 Bacteria 1864
18 Ga0070667_100014846 3300005367 Bacteria 6435
19 Ga0070667_100067534 3300005367 Unclassified 3040
20 Ga0070667_100211957 3300005367 Bacteria 1722
21 Ga0070709_10000283 3300005434 Bacteria 32257
22 Ga0070714_100000403 3300005435 Bacteria 31860
23 Ga0070713_100000848 3300005436 Bacteria 19595
24 Ga0070710_10000160 3300005437 Bacteria 31176
25 Ga0070711_100000349 3300005439 Bacteria 23811
26 Ga0070711_100109767 3300005439 Bacteria 2023
27 Ga0070705_100099923 3300005440 Bacteria 1829
28 Ga0070700_100000119 3300005441 Bacteria 48741
29 Ga0070694_100083921 3300005444 Unclassified 2221
30 Ga0070694_100177509 3300005444 Unclassified 1573
31 Ga0070708_100035629 3300005445 Bacteria 4336
32 Ga0070708_100045575 3300005445 Unclassified 3864
33 Ga0070708_100109386 3300005445 Bacteria 2539
34 Ga0070708_100314920 3300005445 Unclassified 1474
35 Ga0070685_10001612 3300005466 Bacteria 11907
36 Ga0070685_10011621 3300005466 Bacteria 4613
37 Ga0070685_10036091 3300005466 Unclassified 2793
38 Ga0070706_100021218 3300005467 Bacteria 5982
39 Ga0070707_100230255 3300005468 Bacteria 1804
40 Ga0070698_100006181 3300005471 Bacteria 13044
41 Ga0070698_100046137 3300005471 Unclassified 4456
42 Ga0070698_100363442 3300005471 Bacteria 1379
43 Ga0070699_100029745 3300005518 Bacteria 4711
44 Ga0070699_100153349 3300005518 Bacteria 2038
45 Ga0070684_100082169 3300005535 Bacteria 2852
46 Ga0070697_100016328 3300005536 Bacteria 5840
47 Ga0070697_100078506 3300005536 Bacteria 2716
48 Ga0068853_100000754 3300005539 Bacteria 22447
49 Ga0070672_100000600 3300005543 Bacteria 21192
50 Ga0070672_100102965 3300005543 Unclassified 2318
51 Ga0070686_100123139 3300005544 Unclassified 1783
52 Ga0070686_100173440 3300005544 Bacteria 1527
53 Ga0070695_100115601 3300005545 Bacteria 1828
54 Ga0070695_100193507 3300005545 Unclassified 1449
55 Ga0070704_100102594 3300005549 Bacteria 2159
56 Ga0070702_100003928 3300005615 Bacteria 6740
57 Ga0068859_100032027 3300005617 Bacteria 5281
58 Ga0068859_100049573 3300005617 Bacteria 4217
59 Ga0068864_100000007 3300005618 Bacteria 392187
60 Ga0068863_100132328 3300005841 Bacteria 2381
61 Ga0068858_100003752 3300005842 Bacteria 15037
62 Ga0068862_100041584 3300005844 Bacteria 3912
63 Ga0081455_10001156 3300005937 Bacteria 33081
64 Ga0081455_10135516 3300005937 Bacteria 1919
65 Ga0081540_1000617 3300005983 Bacteria 33762
66 Ga0081540_1001202 3300005983 Bacteria 22684
67 Ga0081540_1013084 3300005983 Bacteria 5419
68 Ga0081539_10051110 3300005985 Bacteria 2332
69 Ga0070717_10001151 3300006028 Bacteria 17860
70 Ga0070717_10089750 3300006028 Bacteria 2593
71 Ga0070715_10008175 3300006163 Bacteria 3636
72 Ga0070716_100002811 3300006173 Bacteria 8103
73 Ga0068871_100108160 3300006358 Unclassified 2336
74 Ga0075428_100463727 3300006844 Bacteria 1356
75 Ga0075431_100015885 3300006847 Bacteria 7634
76 Ga0075434_100027611 3300006871 Bacteria 5574
77 Ga0075434_100119376 3300006871 Unclassified 2651
78 Ga0075429_100031949 3300006880 Bacteria 4577
79 Ga0075429_100132568 3300006880 Bacteria 2180
80 Ga0075429_100188931 3300006880 Unclassified 1805
81 Ga0068865_100096592 3300006881 Unclassified 2155
82 Ga0097620_100032028 3300006931 Bacteria 5281
83 Ga0097620_100049575 3300006931 Bacteria 4217
84 Ga0105245_10000863 3300009098 Bacteria 27512
85 Ga0105245_10070883 3300009098 Unclassified 3164
86 Ga0114129_10015400 3300009147 Bacteria 10881
87 Ga0114129_10018946 3300009147 Bacteria 9803
88 Ga0114129_10509412 3300009147 Bacteria 1571
89 Ga0105243_10100247 3300009148 Bacteria 2402
90 Ga0105242_10006155 3300009176 Bacteria 9245
91 Ga0105242_10054965 3300009176 Bacteria 3256
92 Ga0105249_10018240 3300009553 Bacteria 6237
93 Ga0157374_10291074 3300013296 Bacteria 1614
94 Ga0163162_10133901 3300013306 Bacteria 2588
95 Ga0157375_10000003 3300013308 Bacteria 476325
96 Ga0163163_10483160 3300014325 Bacteria 1300
97 Ga0163161_10003491 3300017792 Bacteria 11010
98 Ga0213872_10000153 3300021361 Bacteria 63358
99 Ga0213872_10059331 3300021361 Bacteria 1731
100 Ga0207692_10000102 3300025898 Bacteria 25160
101 Ga0207645_10031203 3300025907 Bacteria 3431
102 Ga0207684_10003303 3300025910 Bacteria 15829
103 Ga0207684_10021391 3300025910 Bacteria 5521
104 Ga0207684_10026603 3300025910 Bacteria 4932
105 Ga0207663_10007463 3300025916 Bacteria 5672
106 Ga0207663_10040061 3300025916 Bacteria 2845
107 Ga0207662_10004867 3300025918 Bacteria 7101
108 Ga0207662_10025575 3300025918 Bacteria 3400
109 Ga0207662_10072292 3300025918 Bacteria 2090
110 Ga0207646_10003336 3300025922 Bacteria 18235
111 Ga0207687_10000527 3300025927 Bacteria 25638
112 Ga0207700_10000139 3300025928 Bacteria 43579
113 Ga0207664_10000108 3300025929 Bacteria 72754
114 Ga0207644_10070350 3300025931 Bacteria 2557
115 Ga0207686_10051970 3300025934 Unclassified 2555
116 Ga0207670_10000459 3300025936 Bacteria 22756
117 Ga0207665_10000753 3300025939 Bacteria 21805
118 Ga0207691_10001373 3300025940 Bacteria 24293
119 Ga0207711_10052088 3300025941 Unclassified 3507
120 Ga0207661_10102263 3300025944 Archaea 2409
121 Ga0207661_10120990 3300025944 Bacteria 2229
122 Ga0207658_10422452 3300025986 Bacteria 1176
123 Ga0207677_10000001 3300026023 Bacteria 534789
124 Ga0207703_10000599 3300026035 Bacteria 36596
125 Ga0207708_10000022 3300026075 Bacteria 181216
126 Ga0207641_10052118 3300026088 Bacteria 3464
127 Ga0207648_10039840 3300026089 Bacteria 4130
128 Ga0207676_10000015 3300026095 Bacteria 329100
129 Ga0207676_10017743 3300026095 Bacteria 5163
130 Ga0268265_10083375 3300028380 Bacteria 2531
131 Ga0265330_10014624 3300031235 Bacteria 3640
132 Ga0265330_10068005 3300031235 Bacteria 1543
133 Ga0265332_10058979 3300031238 Bacteria 1643
134 Ga0265325_10010454 3300031241 Bacteria 5374
135 Ga0265339_10013080 3300031249 Bacteria 5040
136 Ga0265316_10177679 3300031344 Bacteria 1586
137 Ga0307408_100006924 3300031548 Bacteria 7505
138 Ga0307408_100101488 3300031548 Bacteria 2193
139 Ga0307408_100107678 3300031548 Bacteria 2135
140 Ga0265313_10025482 3300031595 Bacteria 3133
141 Ga0265314_10004022 3300031711 Bacteria 13902
142 Ga0265314_10005101 3300031711 Bacteria 11959
143 Ga0316576_10077175 3300031727 Bacteria 2466
144 Ga0307413_10012360 3300031824 Bacteria 4247
145 Ga0307410_10003766 3300031852 Bacteria 7688
146 Ga0307410_10006526 3300031852 Bacteria 6302
147 Ga0307406_10030357 3300031901 Bacteria 3281
148 Ga0307409_100028190 3300031995 Bacteria 3995
149 Ga0307416_100023148 3300032002 Bacteria 4503
150 Ga0307416_100211110 3300032002 Bacteria 1852
151 Ga0307414_10142150 3300032004 Bacteria 1880
152 Ga0307411_10045758 3300032005 Bacteria 2816
153 Ga0316580_10020382 3300032139 Bacteria 2042
154 Ga0373943_0066048 3300035170 Bacteria 1821
155 Ga0373933_0000252 3300035724 Bacteria 35249
156 Ga0373937_0019822 3300036401 Bacteria 6023
157 Ga0316584_0296165 3300036712 Bacteria 1172
158 Ga0395899_0007943 3300037312 Bacteria 8172
159 Ga0395900_0032644 3300037418 Bacteria 5355
160 Ga0395905_0015161 3300037471 Bacteria 7334
161 Ga0395901_0006283 3300038443 Bacteria 12035
162 Ga0436360_0101498 3300039438 Bacteria 4355
163 Ga0436361_0160413 3300039447 Bacteria 7109
164 Ga0436361_0280538 3300039447 Bacteria 40481
165 Ga0436361_0505056 3300039447 Bacteria 1408
166 Ga0451577_0180433 3300042876 Bacteria 1903
167 Ga0451577_0313266 3300042876 Bacteria 1422
168 Ga0466972_0001686 3300044658 Bacteria 10824
169 Ga0453683_0044307 3300044673 Unclassified 2791
170 Ga0453683_0243206 3300044673 Bacteria 1146
171 Ga0466961_0001663 3300044693 Bacteria 13823
172 Ga0453684_0158340 3300044712 Bacteria 2681
173 Ga0453684_0223171 3300044712 Bacteria 2181
174 Ga0453684_0566951 3300044712 Unclassified 1249
175 Ga0466968_0005132 3300044735 Bacteria 4898
176 Ga0466960_0001788 3300044901 Bacteria 7893
177 Ga0495629_0097061 3300046459 Bacteria 2056
178 Ga0495580_0044707 3300046472 Bacteria 3149
179 Ga0495620_0006755 3300046515 Bacteria 6275
180 Ga0495643_0000008 3300046522 Bacteria 367010
181 Ga0495667_0035926 3300046559 Bacteria 3310
182 Ga0495635_0139018 3300046663 Bacteria 1655
183 Ga0495599_0061231 3300046678 Unclassified 2352
184 Ga0495623_0038767 3300046679 Unclassified 3047
185 Ga0495581_0053961 3300047315 Bacteria 2320
186 Ga0496105_0064484 3300048908 Bacteria 3022
187 Ga0496107_0212435 3300048910 Unclassified 1439
188 Ga0496108_0088504 3300048911 Bacteria 2631
189 Ga0496108_0132150 3300048911 Bacteria 2145
190 Ga0496111_0193196 3300048914 Bacteria 1513
191 Ga0496112_0023256 3300048915 Bacteria 5917
192 Ga0496114_0002911 3300048917 Bacteria 13118
193 Ga0496114_0037228 3300048917 Bacteria 4024
194 Ga0496114_0261273 3300048917 Bacteria 1524
195 Ga0501034_0277310 3300049571 Bacteria 1616
196 Ga0501073_0063784 3300049589 Bacteria 2569
197 Ga0501080_0381456 3300049742 Bacteria 1270
198 nmdc:mga05p37_36477_c1 3300050507 Bacteria 6031
199 nmdc:mga05p37_399758_c1 3300050507 Bacteria 1604
200 nmdc:mga09592_168148_c1 3300050508 Bacteria 1895
201 nmdc:mga09592_316034_c1 3300050508 Bacteria 1353
202 nmdc:mga09592_334449_c1 3300050508 Bacteria 1311
203 nmdc:mga06r32_266412_c1 3300050510 Bacteria 1701
204 nmdc:mga06r32_80561_c1 3300050510 Bacteria 3169
205 nmdc:mga08y16_159204_c1 3300050511 Bacteria 2346
206 nmdc:mga0n895_76341_c1 3300050512 Bacteria 3332
207 nmdc:mga0rr50_197845_c1 3300050513 Bacteria 1650
208 nmdc:mga0a205_10217_c1 3300050515 Bacteria 8622
209 nmdc:mga0a205_11193_c1 3300050515 Bacteria 8258
210 nmdc:mga0a205_191304_c1 3300050515 Archaea 1938
211 Ga0495619_0229799 3300053085 Unclassified 1285
212 Ga0500616_0001171 3300053153 Bacteria 26721
213 2596371916 2595698237 Bacteria 6712432
214 2889310813 2889306138 Bacteria 6358934
215 2902336559 2902330777 Bacteria 6395352
216 2902406275 2902405164 Bacteria 6784948
217 2928128968 2928125067 Bacteria 5937560
218 Ga0070693_100085505
219 rootH1_10018325
220 JGI25404J52841_10000130
221 JGI25404J52841_10000591
222 JGI25404J52841_10002264
223 Ga0070683_100116139
224 Ga0070682_100000035
225 Ga0070682_100026671
226 Ga0068868_100122220
227 Ga0070689_100000748
228 Ga0070691_10100611
229 Ga0070687_100079697
230 Ga0070687_100133583
231 Ga0070692_10172645
232 Ga0070669_100282582
233 Ga0070673_100063525
234 Ga0070673_100169283
235 Ga0070667_100014846
236 Ga0070667_100067534
237 Ga0070667_100211957
238 Ga0070709_10000283
239 Ga0070714_100000403
240 Ga0070713_100000848
241 Ga0070710_10000160
242 Ga0070711_100000349
243 Ga0070711_100109767
244 Ga0070705_100099923
245 Ga0070700_100000119
246 Ga0070694_100083921
247 Ga0070694_100177509
248 Ga0070708_100035629
249 Ga0070708_100045575
250 Ga0070708_100109386
251 Ga0070708_100314920
252 Ga0070685_10001612
253 Ga0070685_10011621
254 Ga0070685_10036091
255 Ga0070706_100021218
256 Ga0070707_100230255
257 Ga0070698_100006181
258 Ga0070698_100046137
259 Ga0070698_100363442
260 Ga0070699_100029745
261 Ga0070699_100153349
262 Ga0070684_100082169
263 Ga0070697_100016328
264 Ga0070697_100078506
265 Ga0068853_100000754
266 Ga0070672_100000600
267 Ga0070672_100102965
268 Ga0070686_100123139
269 Ga0070686_100173440
270 Ga0070695_100115601
271 Ga0070695_100193507
272 Ga0070704_100102594
273 Ga0070702_100003928
274 Ga0068859_100032027
275 Ga0068859_100049573
276 Ga0068864_100000007
277 Ga0068863_100132328
278 Ga0068858_100003752
279 Ga0068862_100041584
280 Ga0081455_10001156
281 Ga0081455_10135516
282 Ga0081540_1000617
283 Ga0081540_1001202
284 Ga0081540_1013084
285 Ga0081539_10051110
286 Ga0070717_10001151
287 Ga0070717_10089750
288 Ga0070715_10008175
289 Ga0070716_100002811
290 Ga0068871_100108160
291 Ga0075428_100463727
292 Ga0075431_100015885
293 Ga0075434_100027611
294 Ga0075434_100119376
295 Ga0075429_100031949
296 Ga0075429_100132568
297 Ga0075429_100188931
298 Ga0068865_100096592
299 Ga0097620_100032028
300 Ga0097620_100049575
301 Ga0105245_10000863
302 Ga0105245_10070883
303 Ga0114129_10015400
304 Ga0114129_10018946
305 Ga0114129_10509412
306 Ga0105243_10100247
307 Ga0105242_10006155
308 Ga0105242_10054965
309 Ga0105249_10018240
310 Ga0157374_10291074
311 Ga0163162_10133901
312 Ga0157375_10000003
313 Ga0163163_10483160
314 Ga0163161_10003491
315 Ga0213872_10000153
316 Ga0213872_10059331
317 Ga0207692_10000102
318 Ga0207645_10031203
319 Ga0207684_10003303
320 Ga0207684_10021391
321 Ga0207684_10026603
322 Ga0207663_10007463
323 Ga0207663_10040061
324 Ga0207662_10004867
325 Ga0207662_10025575
326 Ga0207662_10072292
327 Ga0207646_10003336
328 Ga0207687_10000527
329 Ga0207700_10000139
330 Ga0207664_10000108
331 Ga0207644_10070350
332 Ga0207686_10051970
333 Ga0207670_10000459
334 Ga0207665_10000753
335 Ga0207691_10001373
336 Ga0207711_10052088
337 Ga0207661_10102263
338 Ga0207661_10120990
339 Ga0207658_10422452
340 Ga0207677_10000001
341 Ga0207703_10000599
342 Ga0207708_10000022
343 Ga0207641_10052118
344 Ga0207648_10039840
345 Ga0207676_10000015
346 Ga0207676_10017743
347 Ga0268265_10083375
348 Ga0265330_10014624
349 Ga0265330_10068005
350 Ga0265332_10058979
351 Ga0265325_10010454
352 Ga0265339_10013080
353 Ga0265316_10177679
354 Ga0307408_100006924
355 Ga0307408_100101488
356 Ga0307408_100107678
357 Ga0265313_10025482
358 Ga0265314_10004022
359 Ga0265314_10005101
360 Ga0316576_10077175
361 Ga0307413_10012360
362 Ga0307410_10003766
363 Ga0307410_10006526
364 Ga0307406_10030357
365 Ga0307409_100028190
366 Ga0307416_100023148
367 Ga0307416_100211110
368 Ga0307414_10142150
369 Ga0307411_10045758
370 Ga0316580_10020382
371 Ga0373943_0066048
372 Ga0373933_0000252
373 Ga0373937_0019822
374 Ga0316584_0296165
375 Ga0395899_0007943
376 Ga0395900_0032644
377 Ga0395905_0015161
378 Ga0395901_0006283
379 Ga0436360_0101498
380 Ga0436361_0160413
381 Ga0436361_0280538
382 Ga0436361_0505056
383 Ga0451577_0180433
384 Ga0451577_0313266
385 Ga0466972_0001686
386 Ga0453683_0044307
387 Ga0453683_0243206
388 Ga0466961_0001663
389 Ga0453684_0158340
390 Ga0453684_0223171
391 Ga0453684_0566951
392 Ga0466968_0005132
393 Ga0466960_0001788
394 Ga0495629_0097061
395 Ga0495580_0044707
396 Ga0495620_0006755
397 Ga0495643_0000008
398 Ga0495667_0035926
399 Ga0495635_0139018
400 Ga0495599_0061231
401 Ga0495623_0038767
402 Ga0495581_0053961
403 Ga0496105_0064484
404 Ga0496107_0212435
405 Ga0496108_0088504
406 Ga0496108_0132150
407 Ga0496111_0193196
408 Ga0496112_0023256
409 Ga0496114_0002911
410 Ga0496114_0037228
411 Ga0496114_0261273
412 Ga0501034_0277310
413 Ga0501073_0063784
414 Ga0501080_0381456
415 nmdc:mga05p37_36477_c1
416 nmdc:mga05p37_399758_c1
417 nmdc:mga09592_168148_c1
418 nmdc:mga09592_316034_c1
419 nmdc:mga09592_334449_c1
420 nmdc:mga06r32_266412_c1
421 nmdc:mga06r32_80561_c1
422 nmdc:mga08y16_159204_c1
423 nmdc:mga0n895_76341_c1
424 nmdc:mga0rr50_197845_c1
425 nmdc:mga0a205_10217_c1
426 nmdc:mga0a205_11193_c1
427 nmdc:mga0a205_191304_c1
428 Ga0495619_0229799
429 Ga0500616_0001171
430 2596371916
431 2889310813
432 2902336559
433 2902406275
434 2928128968

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03435

Sacchrp_dh_NADP

Saccharopine dehydrogenase NADP binding domain

3

121

0.88

PF13460

NAD_binding_10

NAD(P)H-binding

7

118

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4j91-assembly1.cif.gz_D-2 diamond-shaped octameric structure of ktra with adp bound 0.8563 5 109
4j91-assembly1.cif.gz_A-2 diamond-shaped octameric structure of ktra with adp bound 0.8422 5 109
6s2j-assembly1.cif.gz_A square conformation of ktra r16k mutant ring with bound atp 0.8325 5 98
6s5o-assembly1.cif.gz_H-5 non-square conformations of ktra e125q mutant rings with bound adp 0.8293 5 98
1lsu-assembly2.cif.gz_B ktn bsu222 crystal structure in complex with nadh 0.826 5 109
ID Description Score Start End Superfamily
af_I1LWP4_7_171_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9265 5 135 3.40.50.720
af_A0A0N7KSE7_9_129_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9061 40 128 3.40.50.720
af_Q5RHQ4_13_183_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8983 5 135 3.40.50.720
af_A0A0P0Y6T5_38_191_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.895 5 128 3.40.50.720
af_P9WGV5_8_167_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8816 4 147 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A250BH59-F1-model_v4 deleted 0.984 5 123
AF-A0A345UKU1-F1-model_v4 Saccharopine dehydrogenase NADP binding domain-containing protein 0.9768 3 354
AF-A0A3D5KM29-F1-model_v4 Saccharopine dehydrogenase NADP binding domain-containing protein 0.9763 1 353
AF-A0A4D6HGJ1-F1-model_v4 Saccharopine dehydrogenase 0.9762 2 354
AF-A0A6A9SZM7-F1-model_v4 NAD(P)H-binding protein 0.9762 5 353

Map