F328652

General Info

Members Datasets Scaffolds Average Seq Length
217 147 434 329

Family's Representative Sequence

Representative Sequence 3300006846|Ga0075430_100049921|Ga0075430_1000499212
Length 344
Sequence MTHLRHPTHPIPPGTRDILPDEMRELRRLSLALIDTFERFGYGEVATPTIEYEDVLARGDERGAPVAYRFFDESGELLAMRSDMTIPIARLVANRYAGAEPPYRLCYLARAYRAVRPQRGQMREFTQAGVELVGAPAPEGTVEVVEVLAAALDAAGLTRAVIGLGDADLYRQLLDEVGVTGEARGRLLDCLATHDHVGLEAEVGRLDLDEQHRDTLLRAPTLRGGPEVLEEARRLGGPATDRATSRLAETFEALRARGVADRISLDLGLLRDLGYYTGAILEVYDPALGHILGGGGRYDELMGRFGRPLPAAGFALHLERLHVAQAEEERESAIRSPQSAGGPA

Samples

Sample ID Description Type Environment
1 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
2 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
14 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
15 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
22 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
23 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
39 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
40 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
55 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
56 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
57 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
58 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
59 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
60 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
61 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
62 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
63 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
64 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
65 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
66 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
67 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
68 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
69 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
70 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
71 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
72 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
73 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
74 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
75 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
76 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
77 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
78 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
79 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
80 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
81 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
82 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
83 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
84 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
85 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
86 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
87 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
88 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
89 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
90 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
91 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
92 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
93 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
94 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
95 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
96 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
97 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
98 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
99 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
100 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
101 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
102 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
103 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
104 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
105 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
113 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
119 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
131 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
132 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
138 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
139 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
140 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
141 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
142 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
143 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
144 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
145 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.84
Nodule 0
Rhizoplane 12.44
Rhizosphere 84.79
Stem 0
Stem Tuber 0
Unclassified 1.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075430_100049921 3300006846 Bacteria 3530
2 Ga0070682_100000578 3300005337 Bacteria 22504
3 Ga0068868_100012815 3300005338 Bacteria 6133
4 Ga0070689_100265845 3300005340 Bacteria 1419
5 Ga0070668_100483959 3300005347 Bacteria 1069
6 Ga0070671_100153939 3300005355 Bacteria 1942
7 Ga0070674_100000235 3300005356 Bacteria 27333
8 Ga0070674_100083094 3300005356 Bacteria 2292
9 Ga0070711_100000944 3300005439 Bacteria 15375
10 Ga0070700_100120107 3300005441 Bacteria 1760
11 Ga0070678_100078379 3300005456 Bacteria 2496
12 Ga0070662_100000925 3300005457 Bacteria 17953
13 Ga0070684_100038310 3300005535 Bacteria 4118
14 Ga0070693_100002911 3300005547 Bacteria 7898
15 Ga0070704_100112985 3300005549 Bacteria 2070
16 Ga0068866_10000008 3300005718 Bacteria 117658
17 Ga0068866_10043414 3300005718 Bacteria 2244
18 Ga0068863_100000022 3300005841 Bacteria 188278
19 Ga0068863_100003052 3300005841 Bacteria 16547
20 Ga0081455_10047633 3300005937 Bacteria 3710
21 Ga0081455_10298748 3300005937 Bacteria 1156
22 Ga0081538_10000227 3300005981 Bacteria 63237
23 Ga0081538_10028617 3300005981 Bacteria 3827
24 Ga0081538_10038860 3300005981 Bacteria 3061
25 Ga0081538_10081417 3300005981 Bacteria 1722
26 Ga0081540_1000041 3300005983 Bacteria 136874
27 Ga0081540_1002481 3300005983 Bacteria 15029
28 Ga0081539_10028843 3300005985 Bacteria 3484
29 Ga0075365_10008402 3300006038 Bacteria 5858
30 Ga0070715_10000021 3300006163 Bacteria 119283
31 Ga0097621_100238015 3300006237 Bacteria 1591
32 Ga0068871_100141943 3300006358 Bacteria 2043
33 Ga0075428_100425871 3300006844 Unclassified 1422
34 Ga0075430_100015501 3300006846 Bacteria 6489
35 Ga0075430_100222266 3300006846 Bacteria 1567
36 Ga0075431_100008031 3300006847 Bacteria 10528
37 Ga0075431_100035975 3300006847 Bacteria 5100
38 Ga0075431_100097564 3300006847 Bacteria 3035
39 Ga0075433_10001387 3300006852 Bacteria 17846
40 Ga0075433_10033321 3300006852 Bacteria 4415
41 Ga0075434_100002616 3300006871 Bacteria 15875
42 Ga0075434_100038871 3300006871 Bacteria 4715
43 Ga0075429_100005398 3300006880 Bacteria 11000
44 Ga0114129_10011936 3300009147 Bacteria 12356
45 Ga0114129_10046061 3300009147 Bacteria 6130
46 Ga0114129_10116760 3300009147 Bacteria 3677
47 Ga0105242_10000533 3300009176 Bacteria 30003
48 Ga0105242_10141371 3300009176 Bacteria 2089
49 Ga0105238_10000055 3300009551 Bacteria 139232
50 Ga0157370_10044257 3300013104 Bacteria 4280
51 Ga0157374_10003554 3300013296 Bacteria 13123
52 Ga0157374_10090859 3300013296 Bacteria 2911
53 Ga0157378_10106801 3300013297 Bacteria 2561
54 Ga0157378_10177462 3300013297 Bacteria 2002
55 Ga0157375_10041089 3300013308 Bacteria 4463
56 Ga0157375_10484343 3300013308 Bacteria 1402
57 Ga0163163_10282670 3300014325 Bacteria 1711
58 Ga0157380_10005021 3300014326 Bacteria 9224
59 Ga0163161_10000053 3300017792 Bacteria 117408
60 Ga0163161_10162806 3300017792 Bacteria 1702
61 Ga0207642_10000002 3300025899 Bacteria 658166
62 Ga0207642_10011322 3300025899 Bacteria 3177
63 Ga0207710_10052733 3300025900 Bacteria 1829
64 Ga0207685_10000028 3300025905 Bacteria 97935
65 Ga0207694_10000063 3300025924 Bacteria 139700
66 Ga0207690_10046686 3300025932 Bacteria 2870
67 Ga0207706_10002479 3300025933 Bacteria 17986
68 Ga0207686_10000073 3300025934 Bacteria 92009
69 Ga0207670_10090996 3300025936 Bacteria 2157
70 Ga0207669_10000182 3300025937 Bacteria 29102
71 Ga0207668_10446330 3300025972 Bacteria 1103
72 Ga0207677_10058516 3300026023 Bacteria 2654
73 Ga0207708_10087319 3300026075 Bacteria 2401
74 Ga0207708_10139501 3300026075 Bacteria 1900
75 Ga0207641_10000016 3300026088 Bacteria 307363
76 Ga0207641_10002193 3300026088 Bacteria 18362
77 Ga0207683_10111290 3300026121 Bacteria 2452
78 Ga0207428_10013763 3300027907 Bacteria 7052
79 Ga0207428_10113761 3300027907 Bacteria 2080
80 Ga0265319_1000105 3300028563 Bacteria 65502
81 Ga0265338_10000507 3300028800 Bacteria 69026
82 Ga0307511_10137075 3300030521 Bacteria 1453
83 Ga0307513_10109185 3300031456 Bacteria 2765
84 Ga0373956_0043685 3300035119 Bacteria 1996
85 Ga0395900_0193332 3300037418 Bacteria 2063
86 Ga0395900_0277839 3300037418 Bacteria 1668
87 Ga0395898_0142838 3300037466 Bacteria 2292
88 Ga0395898_0240378 3300037466 Bacteria 1727
89 Ga0395901_0129234 3300038443 Bacteria 2655
90 Ga0466963_0000008 3300044694 Bacteria 74916
91 Ga0466963_0045101 3300044694 Bacteria 2903
92 Ga0495592_0003688 3300046454 Bacteria 11039
93 Ga0495603_0007986 3300046455 Bacteria 6388
94 Ga0495603_0010572 3300046455 Bacteria 5590
95 Ga0495629_0007301 3300046459 Bacteria 8140
96 Ga0495629_0223142 3300046459 Bacteria 1300
97 Ga0495651_0026915 3300046462 Bacteria 4478
98 Ga0495651_0045199 3300046462 Bacteria 3412
99 Ga0495651_0213438 3300046462 Bacteria 1341
100 Ga0495653_0225180 3300046463 Bacteria 1258
101 Ga0495582_0000001 3300046473 Bacteria 252434
102 Ga0495639_0128529 3300046475 Unclassified 1212
103 Ga0495662_0002686 3300046476 Bacteria 8981
104 Ga0495594_0000011 3300046499 Bacteria 118444
105 Ga0495608_0005478 3300046511 Bacteria 9073
106 Ga0495608_0007506 3300046511 Bacteria 7697
107 Ga0495618_0000091 3300046514 Bacteria 64654
108 Ga0495620_0000211 3300046515 Bacteria 43874
109 Ga0495628_0034992 3300046516 Bacteria 4038
110 Ga0495628_0219968 3300046516 Bacteria 1426
111 Ga0495630_0004844 3300046517 Bacteria 9443
112 Ga0495644_0000176 3300046523 Bacteria 30116
113 Ga0495652_0000037 3300046529 Bacteria 133232
114 Ga0495652_0014694 3300046529 Bacteria 7021
115 Ga0495640_0019139 3300046533 Bacteria 5059
116 Ga0495586_0031863 3300046535 Bacteria 2826
117 Ga0495587_0017335 3300046536 Bacteria 4474
118 Ga0495587_0200758 3300046536 Bacteria 1128
119 Ga0495598_0001538 3300046537 Bacteria 4612
120 Ga0495645_0019494 3300046543 Bacteria 4882
121 Ga0495622_0000021 3300046557 Bacteria 162267
122 Ga0495668_0050171 3300046616 Bacteria 2313
123 Ga0495634_0006592 3300046642 Bacteria 8806
124 Ga0495634_0008204 3300046642 Bacteria 7785
125 Ga0495635_0000086 3300046663 Bacteria 55020
126 Ga0495657_0002416 3300046675 Bacteria 15729
127 Ga0495657_0141180 3300046675 Bacteria 1501
128 Ga0495647_0000001 3300046681 Bacteria 222371
129 Ga0495647_0001895 3300046681 Bacteria 6513
130 Ga0495647_0022110 3300046681 Bacteria 2296
131 Ga0495658_0000002 3300046683 Bacteria 309651
132 Ga0495669_0000143 3300046684 Bacteria 45428
133 Ga0495613_0003350 3300046689 Bacteria 11976
134 Ga0495624_0000594 3300046690 Bacteria 28184
135 Ga0495670_0060059 3300046691 Bacteria 1910
136 Ga0495600_0002071 3300046809 Bacteria 11318
137 Ga0495600_0107325 3300046809 Bacteria 1819
138 Ga0495604_0000050 3300047317 Bacteria 108094
139 Ga0495674_0000059 3300047319 Bacteria 73353
140 Ga0495674_0300926 3300047319 Bacteria 1310
141 Ga0495672_0070235 3300047320 Bacteria 1985
142 Ga0495676_0004577 3300047321 Bacteria 12659
143 Ga0495676_0025514 3300047321 Bacteria 5102
144 Ga0495676_0181603 3300047321 Bacteria 1474
145 Ga0495680_0000212 3300047322 Bacteria 63418
146 Ga0495680_0025775 3300047322 Bacteria 4862
147 Ga0495675_0111853 3300047444 Bacteria 1704
148 Ga0495685_026677 3300047447 Bacteria 1986
149 Ga0495673_0051902 3300047469 Bacteria 1794
150 Ga0495593_0061502 3300047673 Bacteria 1964
151 Ga0495593_0136314 3300047673 Bacteria 1244
152 Ga0496100_0000001 3300048903 Bacteria 530179
153 Ga0496100_0000013 3300048903 Bacteria 177476
154 Ga0496101_0000004 3300048904 Bacteria 331599
155 Ga0496101_0000035 3300048904 Bacteria 177237
156 Ga0496102_0000522 3300048905 Bacteria 41862
157 Ga0496103_0000174 3300048906 Bacteria 67124
158 Ga0496103_0007177 3300048906 Bacteria 6644
159 Ga0496104_0000052 3300048907 Bacteria 137286
160 Ga0496104_0001566 3300048907 Bacteria 19685
161 Ga0496105_0000030 3300048908 Bacteria 137325
162 Ga0496105_0001501 3300048908 Bacteria 16486
163 Ga0496105_0013778 3300048908 Bacteria 6421
164 Ga0496106_0000062 3300048909 Bacteria 85769
165 Ga0496106_0000139 3300048909 Bacteria 54238
166 Ga0496106_0000414 3300048909 Bacteria 30298
167 Ga0496107_0000005 3300048910 Bacteria 281747
168 Ga0496107_0000020 3300048910 Bacteria 148990
169 Ga0496107_0005847 3300048910 Bacteria 8420
170 Ga0496109_0006784 3300048912 Bacteria 9645
171 Ga0496110_0029251 3300048913 Bacteria 4740
172 Ga0496111_0012923 3300048914 Bacteria 5666
173 Ga0496111_0104642 3300048914 Bacteria 2082
174 Ga0496113_0151938 3300048916 Bacteria 1827
175 Ga0496114_0000039 3300048917 Bacteria 138486
176 Ga0496114_0009804 3300048917 Bacteria 7611
177 Ga0496115_0000011 3300048918 Bacteria 222529
178 Ga0496115_0000162 3300048918 Bacteria 62522
179 Ga0501034_0085892 3300049571 Unclassified 3148
180 Ga0501036_0060393 3300049572 Bacteria 3212
181 Ga0501038_0156267 3300049574 Bacteria 1857
182 Ga0501039_0166879 3300049575 Bacteria 1731
183 Ga0501040_0065635 3300049576 Bacteria 2500
184 Ga0501040_0369080 3300049576 Bacteria 1029
185 Ga0501042_0167054 3300049578 Bacteria 1587
186 Ga0501071_0161551 3300049587 Bacteria 1674
187 Ga0501072_0008765 3300049588 Bacteria 7679
188 Ga0501074_0034123 3300049590 Bacteria 3689
189 Ga0501075_0004637 3300049591 Bacteria 9327
190 Ga0501079_0106097 3300049741 Bacteria 2180
191 Ga0501045_0020050 3300049824 Bacteria 4773
192 nmdc:mga0yw44_35622_c1 3300050492 Bacteria 2926
193 nmdc:mga05p37_218350_c1 3300050507 Bacteria 2302
194 nmdc:mga05p37_8499_c1 3300050507 Bacteria 12134
195 nmdc:mga09592_53047_c1 3300050508 Bacteria 3423
196 nmdc:mga0qj67_42653_c1 3300050509 Bacteria 3571
197 nmdc:mga0qj67_62039_c1 3300050509 Bacteria 2970
198 nmdc:mga06r32_11123_c1 3300050510 Bacteria 8103
199 nmdc:mga0n895_53411_c1 3300050512 Bacteria 3970
200 nmdc:mga0a205_13148_c1 3300050515 Bacteria 7320
201 nmdc:mga0a205_134804_c1 3300050515 Bacteria 2370
202 nmdc:mga0a205_521_c1 3300050515 Bacteria 18797
203 Ga0495601_0006880 3300053077 Bacteria 6662
204 Ga0495601_0014754 3300053077 Bacteria 4715
205 Ga0495612_0000160 3300053078 Bacteria 28362
206 Ga0495612_0015832 3300053078 Bacteria 3023
207 Ga0495655_0000002 3300053083 Bacteria 312752
208 Ga0495595_0000178 3300053084 Bacteria 25404
209 Ga0495619_0000485 3300053085 Bacteria 26622
210 Ga0495619_0000680 3300053085 Bacteria 22263
211 Ga0495619_0003183 3300053085 Bacteria 10637
212 Ga0495619_0009287 3300053085 Bacteria 6208
213 Ga0495619_0075668 3300053085 Bacteria 2259
214 Ga0500566_0007440 3300053094 Bacteria 6490
215 Ga0500628_000001 3300053129 Bacteria 564074
216 Ga0501084_0273588 3300054114 Bacteria 1426
217 Ga0530510_0100817 3300061734 Bacteria 2111
218 Ga0075430_100049921
219 Ga0070682_100000578
220 Ga0068868_100012815
221 Ga0070689_100265845
222 Ga0070668_100483959
223 Ga0070671_100153939
224 Ga0070674_100000235
225 Ga0070674_100083094
226 Ga0070711_100000944
227 Ga0070700_100120107
228 Ga0070678_100078379
229 Ga0070662_100000925
230 Ga0070684_100038310
231 Ga0070693_100002911
232 Ga0070704_100112985
233 Ga0068866_10000008
234 Ga0068866_10043414
235 Ga0068863_100000022
236 Ga0068863_100003052
237 Ga0081455_10047633
238 Ga0081455_10298748
239 Ga0081538_10000227
240 Ga0081538_10028617
241 Ga0081538_10038860
242 Ga0081538_10081417
243 Ga0081540_1000041
244 Ga0081540_1002481
245 Ga0081539_10028843
246 Ga0075365_10008402
247 Ga0070715_10000021
248 Ga0097621_100238015
249 Ga0068871_100141943
250 Ga0075428_100425871
251 Ga0075430_100015501
252 Ga0075430_100222266
253 Ga0075431_100008031
254 Ga0075431_100035975
255 Ga0075431_100097564
256 Ga0075433_10001387
257 Ga0075433_10033321
258 Ga0075434_100002616
259 Ga0075434_100038871
260 Ga0075429_100005398
261 Ga0114129_10011936
262 Ga0114129_10046061
263 Ga0114129_10116760
264 Ga0105242_10000533
265 Ga0105242_10141371
266 Ga0105238_10000055
267 Ga0157370_10044257
268 Ga0157374_10003554
269 Ga0157374_10090859
270 Ga0157378_10106801
271 Ga0157378_10177462
272 Ga0157375_10041089
273 Ga0157375_10484343
274 Ga0163163_10282670
275 Ga0157380_10005021
276 Ga0163161_10000053
277 Ga0163161_10162806
278 Ga0207642_10000002
279 Ga0207642_10011322
280 Ga0207710_10052733
281 Ga0207685_10000028
282 Ga0207694_10000063
283 Ga0207690_10046686
284 Ga0207706_10002479
285 Ga0207686_10000073
286 Ga0207670_10090996
287 Ga0207669_10000182
288 Ga0207668_10446330
289 Ga0207677_10058516
290 Ga0207708_10087319
291 Ga0207708_10139501
292 Ga0207641_10000016
293 Ga0207641_10002193
294 Ga0207683_10111290
295 Ga0207428_10013763
296 Ga0207428_10113761
297 Ga0265319_1000105
298 Ga0265338_10000507
299 Ga0307511_10137075
300 Ga0307513_10109185
301 Ga0373956_0043685
302 Ga0395900_0193332
303 Ga0395900_0277839
304 Ga0395898_0142838
305 Ga0395898_0240378
306 Ga0395901_0129234
307 Ga0466963_0000008
308 Ga0466963_0045101
309 Ga0495592_0003688
310 Ga0495603_0007986
311 Ga0495603_0010572
312 Ga0495629_0007301
313 Ga0495629_0223142
314 Ga0495651_0026915
315 Ga0495651_0045199
316 Ga0495651_0213438
317 Ga0495653_0225180
318 Ga0495582_0000001
319 Ga0495639_0128529
320 Ga0495662_0002686
321 Ga0495594_0000011
322 Ga0495608_0005478
323 Ga0495608_0007506
324 Ga0495618_0000091
325 Ga0495620_0000211
326 Ga0495628_0034992
327 Ga0495628_0219968
328 Ga0495630_0004844
329 Ga0495644_0000176
330 Ga0495652_0000037
331 Ga0495652_0014694
332 Ga0495640_0019139
333 Ga0495586_0031863
334 Ga0495587_0017335
335 Ga0495587_0200758
336 Ga0495598_0001538
337 Ga0495645_0019494
338 Ga0495622_0000021
339 Ga0495668_0050171
340 Ga0495634_0006592
341 Ga0495634_0008204
342 Ga0495635_0000086
343 Ga0495657_0002416
344 Ga0495657_0141180
345 Ga0495647_0000001
346 Ga0495647_0001895
347 Ga0495647_0022110
348 Ga0495658_0000002
349 Ga0495669_0000143
350 Ga0495613_0003350
351 Ga0495624_0000594
352 Ga0495670_0060059
353 Ga0495600_0002071
354 Ga0495600_0107325
355 Ga0495604_0000050
356 Ga0495674_0000059
357 Ga0495674_0300926
358 Ga0495672_0070235
359 Ga0495676_0004577
360 Ga0495676_0025514
361 Ga0495676_0181603
362 Ga0495680_0000212
363 Ga0495680_0025775
364 Ga0495675_0111853
365 Ga0495685_026677
366 Ga0495673_0051902
367 Ga0495593_0061502
368 Ga0495593_0136314
369 Ga0496100_0000001
370 Ga0496100_0000013
371 Ga0496101_0000004
372 Ga0496101_0000035
373 Ga0496102_0000522
374 Ga0496103_0000174
375 Ga0496103_0007177
376 Ga0496104_0000052
377 Ga0496104_0001566
378 Ga0496105_0000030
379 Ga0496105_0001501
380 Ga0496105_0013778
381 Ga0496106_0000062
382 Ga0496106_0000139
383 Ga0496106_0000414
384 Ga0496107_0000005
385 Ga0496107_0000020
386 Ga0496107_0005847
387 Ga0496109_0006784
388 Ga0496110_0029251
389 Ga0496111_0012923
390 Ga0496111_0104642
391 Ga0496113_0151938
392 Ga0496114_0000039
393 Ga0496114_0009804
394 Ga0496115_0000011
395 Ga0496115_0000162
396 Ga0501034_0085892
397 Ga0501036_0060393
398 Ga0501038_0156267
399 Ga0501039_0166879
400 Ga0501040_0065635
401 Ga0501040_0369080
402 Ga0501042_0167054
403 Ga0501071_0161551
404 Ga0501072_0008765
405 Ga0501074_0034123
406 Ga0501075_0004637
407 Ga0501079_0106097
408 Ga0501045_0020050
409 nmdc:mga0yw44_35622_c1
410 nmdc:mga05p37_218350_c1
411 nmdc:mga05p37_8499_c1
412 nmdc:mga09592_53047_c1
413 nmdc:mga0qj67_42653_c1
414 nmdc:mga0qj67_62039_c1
415 nmdc:mga06r32_11123_c1
416 nmdc:mga0n895_53411_c1
417 nmdc:mga0a205_13148_c1
418 nmdc:mga0a205_134804_c1
419 nmdc:mga0a205_521_c1
420 Ga0495601_0006880
421 Ga0495601_0014754
422 Ga0495612_0000160
423 Ga0495612_0015832
424 Ga0495655_0000002
425 Ga0495595_0000178
426 Ga0495619_0000485
427 Ga0495619_0000680
428 Ga0495619_0003183
429 Ga0495619_0009287
430 Ga0495619_0075668
431 Ga0500566_0007440
432 Ga0500628_000001
433 Ga0501084_0273588
434 Ga0530510_0100817

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13393

tRNA-synt_His

Histidyl-tRNA synthetase

14

321

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
3od1-assembly1.cif.gz_A the crystal structure of an atp phosphoribosyltransferase regulatory subunit/histidyl-trna synthetase from bacillus halodurans c 0.8136 1 320
3od1-assembly1.cif.gz_B the crystal structure of an atp phosphoribosyltransferase regulatory subunit/histidyl-trna synthetase from bacillus halodurans c 0.8005 1 320
8oy0-assembly1.cif.gz_B atp phosphoribosyltransferase (hiszg atpprt) from acinetobacter baumanii 0.7838 5 316
3od1-assembly1.cif.gz_A the crystal structure of an atp phosphoribosyltransferase regulatory subunit/histidyl-trna synthetase from bacillus halodurans c 0.7792 1 320
1z7m-assembly3.cif.gz_D atp phosphoribosyl transferase (hiszg atp-prtase) from lactococcus lactis 0.7766 3 324
ID Description Score Start End Superfamily
3od1B01 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.7975 2 320 3.30.930.10
af_Q58406_2_319_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.7948 2 317 3.30.930.10
3od1B01 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.7907 2 320 3.30.930.10
af_Q58406_2_319_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.7808 2 317 3.30.930.10
1z7nB00 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.7705 3 324 3.30.930.10
ID Description Score Start End GO Terms
AF-A0A524JAW2-F1-model_v4 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain-containing protein 0.8887 170 324
AF-A0A357ZG22-F1-model_v4 ATP phosphoribosyltransferase regulatory subunit 0.8756 146 323 GO:0016757
AF-A0A7C6ULA0-F1-model_v4 ATP phosphoribosyltransferase regulatory subunit 0.8572 100 325 GO:0004821
GO:0005737
GO:0006427
GO:0016757
AF-A0A6J4RWP6-F1-model_v4 ATP phosphoribosyltransferase regulatory subunit 0.8456 1 326 GO:0000105
GO:0004821
GO:0005737
GO:0006427
GO:0016757
AF-A0A3D4AM98-F1-model_v4 ATP phosphoribosyltransferase regulatory subunit 0.8455 61 330 GO:0000105
GO:0004821
GO:0005737
GO:0006427
GO:0016757

Map