F328823

General Info

Members Datasets Scaffolds Average Seq Length
217 146 215 913

Family's Representative Sequence

Representative Sequence 3300025315|Ga0207697_10000984|Ga0207697_100009843
Length 986
Sequence MWSCLLGKSMTDSENVIQPDAYQVQKPRALQQRDSTTASLCVDLCSRGCYVASRSAMSQNYKDTLNLPRTDFPMKANLAAREPEMLRTWEETRLYQEIQKSREGRELFVLHDGPPFANGDVHMGTALNKILKDFVVKSQTMLGKRAPYVPGWDCHGLPIEYKVVKESRALSPLEVRQKCEAFARKFINIQREQFRRLGVFGDWEHPYLTMDPKYEAEILRAFAVFVEEGLVYEAQKPVFWSTGAQTALAEAEVEYQDRDDTAVYVKFPITEPRAPNLLANASIAIWTTTPWTLPANLAIAVDAKENYVVQEFSRDGTSETLVLAEKLVPRFSAGTGLQPIGKPLASFPGANLEGVKARHSFLDREVPVFTACFVTMDSGTGLVHIAPGHGADDYVLGMEHKLPILSPVDDHGRFTDEAGLPHLTGKYVFDANPDIVELLRERGMLLGEEKFHHSYPYCWRSKTPIIFRNVDQFFIRIDALRGRALETIHNEVKWIPSWGENRIAGTVESRPDWVISRQRSWGVPLPVFYDKDGKVILDPKTICKLADLVAQRGSNIWFELDDAALAREVGLPPDITKGTDTIDVWIDSGVSHKAVCAVHPELRDPADMYLEATDQHRGWFQSSLMTSIALNNRAPYKTCVTHGFVVDLDGKKISKSGTYEKPTAADHFVGKYGADLLRLWASSIDYTTDVPFSEEIFTRLGDTYRRIRNTLRILLGNLYDFTPHPTLSPSRGEAANSFTLTLIDRWILERLEEVIGTCRLAYEKFEFHKVYHALNQFCAVDLSSLYVDITKDRLYCDAPDSSRRRATQAAMRQIFDGLCSLLAPILVFTAEEAWRYSAVVPTSRDDAGQPGSPTPATASVHLQEFPHSQYRGREAIEQVEELLRLRGIIGQAIERARQEKVIGNTLEARVVLNSDSDVTEKIPRDELEEFFILSDLTVHQGKEASASVTKTPYKKCARCWRHRPTVGTSKAHPDLCDRCEAVVSAH

Samples

Sample ID Description Type Environment
1 2718217752 Candidatus Xiphinematobacter sp. Idaho Grape Isolate Unclassified
2 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
3 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
4 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
5 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
6 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
7 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
11 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
48 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
65 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
66 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
99 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
100 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
101 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
102 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
103 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
104 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
105 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
106 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
107 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
108 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
112 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
113 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
114 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
115 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
116 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
117 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
118 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
119 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
120 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
121 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
122 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
123 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
124 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
127 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
128 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
136 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
139 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
140 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
141 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
142 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
143 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
144 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
145 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
146 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.08
Metatranscriptomes 0
Isolates 0.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.15
Nodule 0
Rhizoplane 3.23
Rhizosphere 85.25
Stem 0
Stem Tuber 0
Unclassified 7.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 CNXas_1000061 3300000545 Bacteria 20985
2 JGI24746J21847_1000241 3300001977 Bacteria 7596
3 JGI24743J22301_10000005 3300001991 Bacteria 22941
4 JGI24033J26618_1000038 3300002155 Bacteria 18550
5 JGI25406J46586_10000474 3300003203 Bacteria 18715
6 rootH2_10000524 3300003320 Bacteria 95867
7 rootH1_10020237 3300003323 Bacteria 65963
8 JGI25405J52794_10002015 3300003911 Unclassified 3446
9 Ga0065715_10091294 3300005293 Bacteria 5915
10 Ga0070683_100011367 3300005329 Bacteria 7693
11 Ga0070670_100009394 3300005331 Bacteria 8348
12 Ga0070670_100013651 3300005331 Bacteria 6962
13 Ga0070666_10008703 3300005335 Bacteria 6312
14 Ga0070666_10045014 3300005335 Bacteria 2958
15 Ga0068868_100008332 3300005338 Bacteria 7418
16 Ga0068868_100029670 3300005338 Bacteria 4190
17 Ga0070689_100002076 3300005340 Bacteria 13008
18 Ga0070689_100006174 3300005340 Bacteria 8261
19 Ga0070687_100008117 3300005343 Bacteria 4425
20 Ga0070661_100003647 3300005344 Bacteria 10601
21 Ga0070661_100052719 3300005344 Bacteria 2977
22 Ga0070668_100001452 3300005347 Bacteria 17113
23 Ga0070669_100002674 3300005353 Bacteria 12837
24 Ga0070669_100004634 3300005353 Bacteria 9923
25 Ga0070675_100004242 3300005354 Bacteria 10908
26 Ga0070675_100007987 3300005354 Bacteria 8199
27 Ga0070671_100008701 3300005355 Bacteria 8143
28 Ga0070671_100010775 3300005355 Bacteria 7334
29 Ga0070673_100002107 3300005364 Bacteria 12029
30 Ga0070673_100006163 3300005364 Bacteria 7771
31 Ga0070688_100002259 3300005365 Bacteria 9729
32 Ga0070659_100006145 3300005366 Bacteria 8670
33 Ga0070659_100009641 3300005366 Bacteria 7097
34 Ga0070667_100007057 3300005367 Bacteria 9338
35 Ga0070667_100051585 3300005367 Bacteria 3469
36 Ga0070711_100000927 3300005439 Bacteria 15486
37 Ga0070711_100016289 3300005439 Bacteria 4719
38 Ga0070711_100024470 3300005439 Bacteria 3938
39 Ga0070708_100040299 3300005445 Bacteria 4090
40 Ga0070678_100030728 3300005456 Bacteria 3696
41 Ga0070662_100001650 3300005457 Bacteria 13726
42 Ga0068867_100000149 3300005459 Bacteria 44625
43 Ga0068867_100016367 3300005459 Bacteria 5263
44 Ga0068867_100017101 3300005459 Bacteria 5151
45 Ga0070706_100003259 3300005467 Bacteria 16047
46 Ga0070706_100004603 3300005467 Bacteria 13235
47 Ga0070706_100016018 3300005467 Bacteria 6924
48 Ga0070707_100000306 3300005468 Bacteria 48065
49 Ga0070707_100049794 3300005468 Bacteria 4016
50 Ga0070698_100001528 3300005471 Bacteria 25683
51 Ga0070698_100011594 3300005471 Bacteria 9355
52 Ga0070698_100057455 3300005471 Bacteria 3937
53 Ga0070699_100037551 3300005518 Bacteria 4193
54 Ga0070684_100001535 3300005535 Bacteria 16699
55 Ga0070697_100002766 3300005536 Bacteria 13502
56 Ga0070697_100013049 3300005536 Bacteria 6513
57 Ga0068853_100000199 3300005539 Bacteria 42238
58 Ga0070672_100025046 3300005543 Bacteria 4420
59 Ga0070665_100021411 3300005548 Bacteria 6503
60 Ga0068855_100018254 3300005563 Bacteria 8427
61 Ga0068856_100000473 3300005614 Bacteria 44407
62 Ga0068860_100001519 3300005843 Bacteria 24980
63 Ga0081455_10000725 3300005937 Bacteria 42784
64 Ga0081455_10001494 3300005937 Bacteria 28914
65 Ga0081455_10002780 3300005937 Bacteria 20611
66 Ga0081540_1000380 3300005983 Bacteria 44546
67 Ga0081539_10000026 3300005985 Bacteria 330830
68 Ga0081539_10001925 3300005985 Bacteria 32014
69 Ga0070717_10007245 3300006028 Bacteria 8223
70 Ga0075362_10001302 3300006177 Bacteria 7905
71 Ga0075366_10014385 3300006195 Unclassified 4519
72 Ga0068871_100024027 3300006358 Bacteria 4723
73 Ga0075435_100017422 3300007076 Bacteria 5440
74 Ga0105240_10000026 3300009093 Bacteria 355569
75 Ga0105245_10052479 3300009098 Bacteria 3657
76 Ga0105243_10000062 3300009148 Bacteria 127525
77 Ga0105243_10001899 3300009148 Bacteria 17809
78 Ga0105249_10003708 3300009553 Bacteria 13173
79 Ga0105239_10004587 3300010375 Bacteria 16461
80 Ga0157373_10002642 3300013100 Bacteria 13591
81 Ga0157370_10000550 3300013104 Bacteria 46770
82 Ga0157374_10000041 3300013296 Bacteria 150386
83 Ga0157374_10010648 3300013296 Bacteria 7920
84 Ga0157374_10021956 3300013296 Bacteria 5687
85 Ga0157378_10002888 3300013297 Bacteria 15296
86 Ga0157378_10007874 3300013297 Bacteria 9299
87 Ga0157378_10028227 3300013297 Bacteria 4949
88 Ga0157372_10031425 3300013307 Bacteria 5814
89 Ga0157375_10010030 3300013308 Bacteria 8327
90 Ga0157376_10000129 3300014969 Bacteria 52119
91 Ga0157376_10016260 3300014969 Bacteria 5643
92 Ga0213872_10002739 3300021361 Bacteria 10118
93 Ga0213876_10001376 3300021384 Bacteria 15206
94 Ga0213876_10002364 3300021384 Bacteria 11102
95 Ga0213876_10003491 3300021384 Bacteria 8983
96 Ga0207666_1000183 3300025271 Bacteria 9592
97 Ga0209050_1003976 3300025298 Bacteria 10427
98 Ga0207697_10000494 3300025315 Bacteria 22177
99 Ga0207697_10000938 3300025315 Bacteria 16442
100 Ga0207697_10000984 3300025315 Bacteria 15936
101 Ga0207697_10002983 3300025315 Bacteria 8539
102 Ga0207697_10003575 3300025315 Bacteria 7635
103 Ga0207697_10008282 3300025315 Bacteria 4564
104 Ga0207688_10004863 3300025901 Bacteria 7314
105 Ga0207688_10005465 3300025901 Bacteria 6908
106 Ga0207645_10000660 3300025907 Bacteria 28632
107 Ga0207684_10000042 3300025910 Bacteria 262010
108 Ga0207684_10015723 3300025910 Bacteria 6512
109 Ga0207684_10018294 3300025910 Bacteria 5997
110 Ga0207684_10019866 3300025910 Bacteria 5743
111 Ga0207684_10046539 3300025910 Bacteria 3680
112 Ga0207695_10000246 3300025913 Bacteria 140972
113 Ga0207671_10038160 3300025914 Bacteria 3560
114 Ga0207693_10005740 3300025915 Bacteria 10302
115 Ga0207663_10000778 3300025916 Bacteria 14284
116 Ga0207662_10005996 3300025918 Bacteria 6530
117 Ga0207657_10054944 3300025919 Bacteria 3441
118 Ga0207649_10027536 3300025920 Bacteria 3336
119 Ga0207646_10001149 3300025922 Bacteria 33749
120 Ga0207646_10001395 3300025922 Bacteria 29964
121 Ga0207646_10046761 3300025922 Bacteria 3882
122 Ga0207681_10003839 3300025923 Bacteria 9323
123 Ga0207650_10005665 3300025925 Bacteria 8527
124 Ga0207659_10004297 3300025926 Bacteria 8615
125 Ga0207659_10028012 3300025926 Bacteria 3822
126 Ga0207659_10050490 3300025926 Bacteria 2955
127 Ga0207644_10005475 3300025931 Bacteria 8269
128 Ga0207644_10007638 3300025931 Bacteria 7051
129 Ga0207644_10020041 3300025931 Bacteria 4543
130 Ga0207690_10010809 3300025932 Bacteria 5439
131 Ga0207706_10000535 3300025933 Bacteria 40346
132 Ga0207709_10000452 3300025935 Bacteria 38297
133 Ga0207709_10001298 3300025935 Bacteria 17812
134 Ga0207691_10007323 3300025940 Bacteria 10645
135 Ga0207691_10027756 3300025940 Bacteria 5306
136 Ga0207661_10027930 3300025944 Unclassified 4316
137 Ga0207667_10012876 3300025949 Bacteria 9609
138 Ga0207658_10011844 3300025986 Bacteria 5942
139 Ga0207658_10046101 3300025986 Bacteria 3181
140 Ga0207658_10058153 3300025986 Bacteria 2876
141 Ga0207677_10019585 3300026023 Bacteria 4091
142 Ga0207639_10000235 3300026041 Bacteria 41429
143 Ga0207702_10000240 3300026078 Bacteria 63855
144 Ga0207648_10000474 3300026089 Bacteria 44892
145 Ga0207648_10004077 3300026089 Bacteria 15142
146 Ga0207683_10007420 3300026121 Bacteria 9403
147 Ga0268266_10012012 3300028379 Bacteria 7494
148 Ga0268266_10017834 3300028379 Bacteria 6049
149 Ga0268266_10027517 3300028379 Bacteria 4834
150 Ga0268266_10041515 3300028379 Bacteria 3925
151 Ga0268264_10001382 3300028381 Bacteria 22728
152 Ga0265327_10000562 3300031251 Bacteria 63462
153 Ga0307513_10020556 3300031456 Bacteria 7827
154 Ga0307408_100000014 3300031548 Bacteria 377369
155 Ga0307408_100007673 3300031548 Bacteria 7134
156 Ga0307406_10000010 3300031901 Bacteria 114357
157 Ga0307407_10000062 3300031903 Bacteria 43369
158 Ga0307412_10000211 3300031911 Bacteria 39709
159 Ga0307409_100000960 3300031995 Bacteria 13440
160 Ga0307414_10000034 3300032004 Bacteria 177560
161 Ga0395899_0000009 3300037312 Bacteria 538632
162 Ga0395898_0000050 3300037466 Bacteria 283059
163 Ga0395905_0068002 3300037471 Unclassified 3337
164 Ga0395901_0009917 3300038443 Bacteria 9656
165 Ga0395901_0013051 3300038443 Bacteria 8433
166 Ga0395901_0075311 3300038443 Bacteria 3521
167 Ga0436365_0282499 3300039437 Bacteria 8283
168 Ga0436365_0709357 3300039437 Bacteria 19530
169 Ga0436365_0874983 3300039437 Bacteria 53988
170 Ga0436365_0929096 3300039437 Bacteria 27643
171 Ga0436365_1515978 3300039437 Bacteria 8136
172 Ga0436361_0445374 3300039447 Bacteria 8416
173 Ga0436361_0769210 3300039447 Bacteria 3706
174 Ga0436361_0881870 3300039447 Bacteria 11647
175 Ga0436363_0344166 3300039450 Bacteria 17689
176 Ga0436363_1173668 3300039450 Unclassified 4739
177 Ga0436362_0102447 3300039453 Bacteria 2927
178 Ga0450890_000051 3300042127 Bacteria 24348
179 Ga0450893_0000208 3300042532 Bacteria 7772
180 Ga0450893_0001521 3300042532 Bacteria 3567
181 Ga0466971_0000591 3300044719 Bacteria 14363
182 Ga0495643_0000996 3300046522 Bacteria 28898
183 Ga0495652_0026346 3300046529 Bacteria 5137
184 Ga0495599_0011702 3300046678 Bacteria 5393
185 Ga0495684_0016018 3300047471 Bacteria 5772
186 Ga0496101_0003790 3300048904 Bacteria 9447
187 Ga0496103_0027301 3300048906 Bacteria 3458
188 Ga0496107_0003361 3300048910 Bacteria 10693
189 Ga0496109_0067155 3300048912 Bacteria 3285
190 Ga0496112_0012855 3300048915 Bacteria 7707
191 Ga0496112_0033795 3300048915 Bacteria 4973
192 Ga0496115_0019975 3300048918 Bacteria 5161
193 Ga0496125_0000006 3300048928 Bacteria 759385
194 Ga0501031_0001670 3300049568 Bacteria 13928
195 Ga0501032_0000614 3300049569 Bacteria 28863
196 Ga0501032_0006035 3300049569 Bacteria 8939
197 Ga0501033_0000010 3300049570 Bacteria 270511
198 Ga0501033_0000049 3300049570 Bacteria 114610
199 Ga0501037_0000459 3300049573 Bacteria 33122
200 Ga0501038_0000065 3300049574 Bacteria 86668
201 Ga0501043_0003640 3300049579 Bacteria 12650
202 Ga0501047_0010102 3300049581 Bacteria 8922
203 Ga0501070_0008406 3300049586 Bacteria 8717
204 Ga0501227_000490 3300049665 Bacteria 8431
205 Ga0501080_0055286 3300049742 Bacteria 3697
206 Ga0501035_0000001 3300049822 Bacteria 1037138
207 nmdc:mga03683_447_c1 3300050489 Bacteria 11872
208 nmdc:mga03n38_14579_c1 3300050490 Bacteria 3016
209 nmdc:mga0k408_1834_c1 3300050493 Bacteria 11403
210 nmdc:mga0k408_495_c2 3300050493 Bacteria 18710
211 nmdc:mga05p37_15081_c1 3300050507 Bacteria 9279
212 nmdc:mga0rr50_14744_c1 3300050513 Bacteria 5138
213 Ga0500556_0000287 3300053104 Bacteria 39576
214 Ga0500616_0001908 3300053153 Bacteria 18638
215 Ga0466962_0000091 3300061719 Bacteria 36637

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049742 Ga0501080_0055286 Ga0501080_0055286_1107_3638 832
2 3300039450 Ga0436363_1173668 Ga0436363_1173668_36_2600 838
3 3300038443 Ga0395901_0075311 Ga0395901_0075311_689_3472 861
4 iso_pu_bacteria 2718217752 2718715904 869
5 3300046529 Ga0495652_0026346 Ga0495652_0026346_1470_4262 872
6 3300046678 Ga0495599_0011702 Ga0495599_0011702_290_3082 872
7 3300005937 Ga0081455_10001494 Ga0081455_100014945 874
8 3300048928 Ga0496125_0000006 Ga0496125_0000006_91153_93810 875
9 3300049569 Ga0501032_0000614 Ga0501032_0000614_26183_28828 875
10 3300005467 Ga0070706_100016018 Ga0070706_1000160185 877
11 3300005471 Ga0070698_100001528 Ga0070698_10000152813 877
12 3300005340 Ga0070689_100006174 Ga0070689_1000061743 880
13 3300028379 Ga0268266_10027517 Ga0268266_100275173 880
14 3300049570 Ga0501033_0000049 Ga0501033_0000049_54808_57567 881
15 3300049579 Ga0501043_0003640 Ga0501043_0003640_3014_5728 881
16 3300049665 Ga0501227_000490 Ga0501227_000490_1502_4192 881
17 3300005468 Ga0070707_100000306 Ga0070707_10000030627 883
18 3300005937 Ga0081455_10000725 Ga0081455_1000072532 883
19 3300005937 Ga0081455_10002780 Ga0081455_100027804 883
20 3300021384 Ga0213876_10003491 Ga0213876_100034915 883
21 3300025922 Ga0207646_10001395 Ga0207646_100013952 883
22 3300039437 Ga0436365_0874983 Ga0436365_0874983_44016_46772 883
23 3300001991 JGI24743J22301_10000005 JGI24743J22301_100000055 885
24 3300005467 Ga0070706_100003259 Ga0070706_10000325915 885
25 3300005471 Ga0070698_100057455 Ga0070698_1000574552 885
26 3300005518 Ga0070699_100037551 Ga0070699_1000375512 885
27 3300005536 Ga0070697_100013049 Ga0070697_1000130494 885
28 3300050493 nmdc:mga0k408_495_c2 nmdc:mga0k408_495_c2_14983_17670 885
29 3300039447 Ga0436361_0769210 Ga0436361_0769210_105_2861 886
30 3300050507 nmdc:mga05p37_15081_c1 nmdc:mga05p37_15081_c1_5363_8113 886
31 3300042532 Ga0450893_0000208 Ga0450893_0000208_509_3253 887
32 3300049573 Ga0501037_0000459 Ga0501037_0000459_17490_20204 887
33 3300005439 Ga0070711_100000927 Ga0070711_1000009278 888
34 3300006028 Ga0070717_10007245 Ga0070717_100072453 888
35 3300007076 Ga0075435_100017422 Ga0075435_1000174225 888
36 3300009148 Ga0105243_10001899 Ga0105243_1000189911 888
37 3300025916 Ga0207663_10000778 Ga0207663_100007787 888
38 3300025935 Ga0207709_10001298 Ga0207709_1000129810 888
39 3300050513 nmdc:mga0rr50_14744_c1 nmdc:mga0rr50_14744_c1_99_2840 888
40 3300002155 JGI24033J26618_1000038 JGI24033J26618_100003812 891
41 3300005344 Ga0070661_100052719 Ga0070661_1000527191 891
42 3300005366 Ga0070659_100006145 Ga0070659_1000061454 891
43 3300013297 Ga0157378_10007874 Ga0157378_100078743 891
44 3300049570 Ga0501033_0000010 Ga0501033_0000010_251584_254277 891
45 3300001977 JGI24746J21847_1000241 JGI24746J21847_10002412 893
46 3300003323 rootH1_10020237 rootH1_1002023739 893
47 3300005344 Ga0070661_100003647 Ga0070661_1000036476 893
48 3300005459 Ga0068867_100000149 Ga0068867_10000014934 893
49 3300005614 Ga0068856_100000473 Ga0068856_10000047313 893
50 3300009098 Ga0105245_10052479 Ga0105245_100524792 893
51 3300009148 Ga0105243_10000062 Ga0105243_100000626 893
52 3300025920 Ga0207649_10027536 Ga0207649_100275361 893
53 3300025935 Ga0207709_10000452 Ga0207709_1000045220 893
54 3300026078 Ga0207702_10000240 Ga0207702_1000024055 893
55 3300026089 Ga0207648_10000474 Ga0207648_100004746 893
56 3300037312 Ga0395899_0000009 Ga0395899_0000009_63720_66437 893
57 3300037466 Ga0395898_0000050 Ga0395898_0000050_233608_236349 893
58 3300044719 Ga0466971_0000591 Ga0466971_0000591_9849_12608 893
59 3300049568 Ga0501031_0001670 Ga0501031_0001670_4357_7116 893
60 3300049569 Ga0501032_0006035 Ga0501032_0006035_2130_4862 893
61 3300049581 Ga0501047_0010102 Ga0501047_0010102_1360_4119 893
62 3300049586 Ga0501070_0008406 Ga0501070_0008406_1287_4046 893
63 3300049822 Ga0501035_0000001 Ga0501035_0000001_215083_217842 893
64 3300053153 Ga0500616_0001908 Ga0500616_0001908_2084_4873 893
65 3300061719 Ga0466962_0000091 Ga0466962_0000091_9550_12309 893
66 iso_pu_bacteria 2786546548 2787509264 893
67 3300025914 Ga0207671_10038160 Ga0207671_100381602 894
68 3300005354 Ga0070675_100004242 Ga0070675_1000042426 895
69 3300013100 Ga0157373_10002642 Ga0157373_100026425 895
70 3300013104 Ga0157370_10000550 Ga0157370_1000055015 895
71 3300025315 Ga0207697_10000938 Ga0207697_1000093810 895
72 3300025931 Ga0207644_10005475 Ga0207644_100054754 895
73 3300031548 Ga0307408_100000014 Ga0307408_10000001485 895
74 3300031903 Ga0307407_10000062 Ga0307407_1000006233 895
75 3300031911 Ga0307412_10000211 Ga0307412_1000021126 895
76 3300042127 Ga0450890_000051 Ga0450890_000051_16031_18775 895
77 3300042532 Ga0450893_0001521 Ga0450893_0001521_710_3454 895
78 3300005445 Ga0070708_100040299 Ga0070708_1000402992 896
79 3300025298 Ga0209050_1003976 Ga0209050_10039763 896
80 3300025910 Ga0207684_10018294 Ga0207684_100182943 896
81 3300047471 Ga0495684_0016018 Ga0495684_0016018_2822_5581 896
82 3300048918 Ga0496115_0019975 Ga0496115_0019975_255_3041 896
83 3300003320 rootH2_10000524 rootH2_1000052424 897
84 3300025315 Ga0207697_10008282 Ga0207697_100082822 897
85 3300049574 Ga0501038_0000065 Ga0501038_0000065_30169_32910 897
86 3300005467 Ga0070706_100004603 Ga0070706_1000046039 898
87 3300005563 Ga0068855_100018254 Ga0068855_1000182546 898
88 3300021384 Ga0213876_10002364 Ga0213876_100023644 898
89 3300025315 Ga0207697_10000984 Ga0207697_100009843 898
90 3300025910 Ga0207684_10000042 Ga0207684_10000042218 898
91 3300025949 Ga0207667_10012876 Ga0207667_100128764 898
92 3300031251 Ga0265327_10000562 Ga0265327_1000056217 898
93 3300031548 Ga0307408_100007673 Ga0307408_1000076736 898
94 3300031901 Ga0307406_10000010 Ga0307406_1000001034 898
95 3300031995 Ga0307409_100000960 Ga0307409_10000096012 898
96 3300032004 Ga0307414_10000034 Ga0307414_1000003458 898
97 3300039437 Ga0436365_0709357 Ga0436365_0709357_10582_13329 898
98 3300005329 Ga0070683_100011367 Ga0070683_1000113674 899
99 3300005331 Ga0070670_100013651 Ga0070670_1000136513 899
100 3300005338 Ga0068868_100029670 Ga0068868_1000296701 899
101 3300005340 Ga0070689_100002076 Ga0070689_1000020765 899
102 3300005353 Ga0070669_100004634 Ga0070669_1000046345 899
103 3300005364 Ga0070673_100002107 Ga0070673_1000021077 899
104 3300005365 Ga0070688_100002259 Ga0070688_1000022594 899
105 3300005367 Ga0070667_100007057 Ga0070667_1000070577 899
106 3300005459 Ga0068867_100017101 Ga0068867_1000171013 899
107 3300005543 Ga0070672_100025046 Ga0070672_1000250463 899
108 3300013296 Ga0157374_10000041 Ga0157374_1000004147 899
109 3300014969 Ga0157376_10000129 Ga0157376_100001294 899
110 3300025315 Ga0207697_10003575 Ga0207697_100035755 899
111 3300025901 Ga0207688_10004863 Ga0207688_100048634 899
112 3300025931 Ga0207644_10020041 Ga0207644_100200413 899
113 3300025940 Ga0207691_10007323 Ga0207691_100073234 899
114 3300025944 Ga0207661_10027930 Ga0207661_100279301 899
115 3300026089 Ga0207648_10004077 Ga0207648_100040773 899
116 3300026121 Ga0207683_10007420 Ga0207683_100074205 899
117 3300028379 Ga0268266_10017834 Ga0268266_100178344 899
118 3300003911 JGI25405J52794_10002015 JGI25405J52794_100020152 900
119 3300005364 Ga0070673_100006163 Ga0070673_1000061637 900
120 3300005536 Ga0070697_100002766 Ga0070697_1000027668 900
121 3300005843 Ga0068860_100001519 Ga0068860_10000151918 900
122 3300005983 Ga0081540_1000380 Ga0081540_100038027 900
123 3300006177 Ga0075362_10001302 Ga0075362_100013026 900
124 3300006195 Ga0075366_10014385 Ga0075366_100143853 900
125 3300021361 Ga0213872_10002739 Ga0213872_100027399 900
126 3300021384 Ga0213876_10001376 Ga0213876_1000137619 900
127 3300025271 Ga0207666_1000183 Ga0207666_10001832 900
128 3300025910 Ga0207684_10015723 Ga0207684_100157234 900
129 3300025910 Ga0207684_10046539 Ga0207684_100465392 900
130 3300025922 Ga0207646_10001149 Ga0207646_1000114911 900
131 3300028381 Ga0268264_10001382 Ga0268264_1000138214 900
132 3300037471 Ga0395905_0068002 Ga0395905_0068002_476_3253 900
133 3300038443 Ga0395901_0013051 Ga0395901_0013051_3388_6165 900
134 3300039437 Ga0436365_0929096 Ga0436365_0929096_232_2970 900
135 3300039437 Ga0436365_1515978 Ga0436365_1515978_1303_4035 900
136 3300039447 Ga0436361_0445374 Ga0436361_0445374_4855_7587 900
137 3300039447 Ga0436361_0881870 Ga0436361_0881870_6445_9177 900
138 3300039450 Ga0436363_0344166 Ga0436363_0344166_13154_15886 900
139 3300039453 Ga0436362_0102447 Ga0436362_0102447_49_2781 900
140 3300050489 nmdc:mga03683_447_c1 nmdc:mga03683_447_c1_7815_10547 900
141 3300050490 nmdc:mga03n38_14579_c1 nmdc:mga03n38_14579_c1_195_2927 900
142 3300050493 nmdc:mga0k408_1834_c1 nmdc:mga0k408_1834_c1_3609_6341 900
143 3300053104 Ga0500556_0000287 Ga0500556_0000287_18887_21619 900
144 3300005338 Ga0068868_100008332 Ga0068868_1000083323 901
145 3300005343 Ga0070687_100008117 Ga0070687_1000081172 901
146 3300005347 Ga0070668_100001452 Ga0070668_1000014524 901
147 3300005353 Ga0070669_100002674 Ga0070669_1000026745 901
148 3300005354 Ga0070675_100007987 Ga0070675_1000079874 901
149 3300005366 Ga0070659_100009641 Ga0070659_1000096413 901
150 3300005439 Ga0070711_100016289 Ga0070711_1000162892 901
151 3300005457 Ga0070662_100001650 Ga0070662_1000016509 901
152 3300009553 Ga0105249_10003708 Ga0105249_100037089 901
153 3300010375 Ga0105239_10004587 Ga0105239_1000458710 901
154 3300013296 Ga0157374_10021956 Ga0157374_100219563 901
155 3300013297 Ga0157378_10002888 Ga0157378_100028883 901
156 3300013307 Ga0157372_10031425 Ga0157372_100314253 901
157 3300025315 Ga0207697_10000494 Ga0207697_1000049413 901
158 3300025907 Ga0207645_10000660 Ga0207645_1000066011 901
159 3300025918 Ga0207662_10005996 Ga0207662_100059966 901
160 3300025919 Ga0207657_10054944 Ga0207657_100549442 901
161 3300025923 Ga0207681_10003839 Ga0207681_100038395 901
162 3300025926 Ga0207659_10004297 Ga0207659_100042975 901
163 3300025932 Ga0207690_10010809 Ga0207690_100108093 901
164 3300025933 Ga0207706_10000535 Ga0207706_1000053510 901
165 3300025986 Ga0207658_10011844 Ga0207658_100118445 901
166 3300026023 Ga0207677_10019585 Ga0207677_100195852 901
167 3300005468 Ga0070707_100049794 Ga0070707_1000497942 902
168 3300005471 Ga0070698_100011594 Ga0070698_1000115945 902
169 3300005535 Ga0070684_100001535 Ga0070684_10000153514 902
170 3300025910 Ga0207684_10019866 Ga0207684_100198661 902
171 3300039437 Ga0436365_0282499 Ga0436365_0282499_2785_5526 902
172 3300025926 Ga0207659_10050490 Ga0207659_100504901 903
173 3300005439 Ga0070711_100024470 Ga0070711_1000244701 904
174 3300006358 Ga0068871_100024027 Ga0068871_1000240274 904
175 3300025922 Ga0207646_10046761 Ga0207646_100467613 904
176 3300038443 Ga0395901_0009917 Ga0395901_0009917_1190_3925 904
177 3300048912 Ga0496109_0067155 Ga0496109_0067155_328_3042 904
178 3300003203 JGI25406J46586_10000474 JGI25406J46586_100004746 905
179 3300005331 Ga0070670_100009394 Ga0070670_1000093944 905
180 3300005355 Ga0070671_100010775 Ga0070671_1000107754 905
181 3300005459 Ga0068867_100016367 Ga0068867_1000163672 905
182 3300005985 Ga0081539_10000026 Ga0081539_1000002699 905
183 3300013296 Ga0157374_10010648 Ga0157374_100106484 905
184 3300013308 Ga0157375_10010030 Ga0157375_100100304 905
185 3300025925 Ga0207650_10005665 Ga0207650_100056654 905
186 3300025986 Ga0207658_10058153 Ga0207658_100581531 905
187 3300048915 Ga0496112_0012855 Ga0496112_0012855_503_3220 905
188 3300005335 Ga0070666_10008703 Ga0070666_100087032 906
189 3300005355 Ga0070671_100008701 Ga0070671_1000087014 906
190 3300005367 Ga0070667_100051585 Ga0070667_1000515852 906
191 3300005548 Ga0070665_100021411 Ga0070665_1000214114 906
192 3300025926 Ga0207659_10028012 Ga0207659_100280121 906
193 3300025931 Ga0207644_10007638 Ga0207644_100076383 906
194 3300025940 Ga0207691_10027756 Ga0207691_100277564 906
195 3300028379 Ga0268266_10012012 Ga0268266_100120124 906
196 3300005293 Ga0065715_10091294 Ga0065715_100912943 907
197 3300013297 Ga0157378_10028227 Ga0157378_100282274 908
198 3300025915 Ga0207693_10005740 Ga0207693_100057402 909
199 3300009093 Ga0105240_10000026 Ga0105240_1000002638 911
200 3300025913 Ga0207695_10000246 Ga0207695_1000024696 911
201 3300031456 Ga0307513_10020556 Ga0307513_100205564 911
202 3300005335 Ga0070666_10045014 Ga0070666_100450141 912
203 3300014969 Ga0157376_10016260 Ga0157376_100162602 912
204 3300025315 Ga0207697_10002983 Ga0207697_100029832 912
205 3300025901 Ga0207688_10005465 Ga0207688_100054651 912
206 3300025986 Ga0207658_10046101 Ga0207658_100461011 912
207 3300028379 Ga0268266_10041515 Ga0268266_100415151 912
208 3300048904 Ga0496101_0003790 Ga0496101_0003790_2209_5040 912
209 3300048906 Ga0496103_0027301 Ga0496103_0027301_506_3337 912
210 3300048910 Ga0496107_0003361 Ga0496107_0003361_1005_3836 912
211 3300005985 Ga0081539_10001925 Ga0081539_1000192515 913
212 3300046522 Ga0495643_0000996 Ga0495643_0000996_5963_8764 914
213 3300005456 Ga0070678_100030728 Ga0070678_1000307281 915
214 3300005539 Ga0068853_100000199 Ga0068853_10000019921 915
215 3300026041 Ga0207639_10000235 Ga0207639_1000023521 915
216 3300048915 Ga0496112_0033795 Ga0496112_0033795_920_3772 924
217 3300000545 CNXas_1000061 CNXas_10000615 942

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

84

693

0.95

PF06827

zf-FPG_IleRS

Zinc finger found in FPG and IleRS

954

982

0.95

PF08264

Anticodon_1

Anticodon-binding domain of tRNA ligase

744

912

0.88

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

109

300

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wka-assembly1.cif.gz_A structural basis for non-cognate amino acid discrimination by the valyl-trna synthetase editing domain 0.895 205 412
1wka-assembly1.cif.gz_A structural basis for non-cognate amino acid discrimination by the valyl-trna synthetase editing domain 0.8832 205 412
1ue0-assembly2.cif.gz_B isoleucyl-trna synthetase editing domain complexed with l-valine 0.8638 204 409
1udz-assembly2.cif.gz_B isoleucyl-trna synthetase editing domain 0.8572 206 410
1wny-assembly1.cif.gz_A isoleucyl-trna synthetase editing domain 0.8541 206 410
ID Description Score Start End Superfamily
af_Q54ET5_250_378_3.90.740.10 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.946 317 365 3.90.740.10
af_A0A1D6HM00_82_247_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.934 17 159 3.40.50.620
af_P00956_215_378_3.90.740.10 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.923 224 390 3.90.740.10
af_Q2FZ82_244_362_3.90.740.10 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.9167 242 380 3.90.740.10
af_A0A0G2JZH2_37_194_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9145 49 186 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A3D4AAJ2-F1-model_v4 Zinc finger FPG/IleRS-type domain-containing protein 0.9851 829 941 GO:0004822
GO:0005524
GO:0005829
GO:0006428
AF-A0A2V5TMR9-F1-model_v4 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase anticodon-binding domain-containing protein 0.9707 763 941 GO:0004822
GO:0005524
GO:0005829
GO:0006428
AF-A0A3C0DTV8-F1-model_v4 Isoleucine--tRNA ligase 0.965 1 176 GO:0004822
GO:0005524
GO:0005829
GO:0006428
AF-A0A537W453-F1-model_v4 Isoleucine--tRNA ligase (EC 6.1.1.5) 0.9625 1 152 GO:0004822
GO:0005524
GO:0005829
GO:0006428
AF-A0A7C2ZR15-F1-model_v4 Isoleucine--tRNA ligase 0.9621 711 938 GO:0000049
GO:0004822
GO:0005524
GO:0005829
GO:0006428

Feature Viewer

pLDDT pTM Quality
84.64 0.77 High
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Predicted Structure (AlphaFold2)

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