F329130

General Info

Members Datasets Scaffolds Average Seq Length
217 147 211 343

Family's Representative Sequence

Representative Sequence 3300046506|Ga0495583_0000023|Ga0495583_0000023_117096_118319
Length 407
Sequence MSPSSARSAAVSVPEERQAMTSIADAADHDFGAVADLGNSQDDAARQSKRKQLFMALALGVAVLGGGYYAYDALVASRHVETDNAYVGANVAQITPLVGGPVREVLVDDTVAVKRGDILVRLDDTDARITLARAEAELALTERRVRALQATDSGLGAQIAARAADQARAEAQFTSARGDLEKARIDLGRREALVASGSVSGDELTVARNAFSTASANLKAAEAARVQXXXNRTAAIGSRDANNVMIANTTVDTNPEVLSARATRDQARVDLDRMVLRAPFDGIVSRRQVQVGQRVQAGAMLMVVVPINATYVDANFKEVQLARVRPGQSVTLHSDLYGGDVVYHGRVVGFSGGTGAAFAVVPAQNATGNWIKVVQRLPVRITLDPKELAQHPLRVGLSMTADIHVAS

Samples

Sample ID Description Type Environment
1 2526164512 Azovibrio restrictus DSM 23866 Isolate Unclassified
2 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
3 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
4 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
5 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
6 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
7 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
8 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
9 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
10 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
11 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
12 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
13 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
14 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
24 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
62 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
64 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
98 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
99 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
100 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
101 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
102 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
105 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
106 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
111 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
112 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
113 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
114 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
115 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
116 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
117 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
118 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
119 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
120 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
121 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
122 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
123 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
124 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
125 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
126 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
127 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
128 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
129 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
130 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
131 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
132 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
133 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
134 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
135 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
144 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
145 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
146 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.24
Metatranscriptomes 0
Isolates 2.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.99
Nodule 0
Rhizoplane 0.92
Rhizosphere 87.1
Stem 0
Stem Tuber 0
Unclassified 5.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10006190 3300001990 Bacteria 4098
2 JGI24735J21928_10014464 3300002067 Bacteria 2471
3 JGI24748J21848_1000085 3300002074 Bacteria 28073
4 JGI24744J21845_10005026 3300002077 Bacteria 2737
5 JGI24034J26672_10000069 3300002239 Bacteria 27837
6 JGI25165J46597_1000320 3300003214 Bacteria 57832
7 rootL2_10072698 3300003322 Bacteria 2002
8 Ga0065707_10086971 3300005295 Bacteria 5221
9 Ga0070658_10055565 3300005327 Bacteria 3216
10 Ga0070670_100117828 3300005331 Bacteria 2290
11 Ga0070666_10050043 3300005335 Bacteria 2810
12 Ga0070660_100000402 3300005339 Bacteria 28811
13 Ga0070660_100196054 3300005339 Bacteria 1637
14 Ga0070689_100001657 3300005340 Bacteria 14241
15 Ga0070669_100000099 3300005353 Bacteria 85328
16 Ga0070675_100011122 3300005354 Bacteria 7043
17 Ga0070675_100090483 3300005354 Bacteria 2563
18 Ga0070671_100006363 3300005355 Bacteria 9427
19 Ga0070671_100014735 3300005355 Bacteria 6318
20 Ga0070674_100025378 3300005356 Bacteria 3858
21 Ga0070674_100069716 3300005356 Bacteria 2481
22 Ga0070688_100002008 3300005365 Bacteria 10262
23 Ga0070662_100206874 3300005457 Bacteria 1560
24 Ga0070685_10000101 3300005466 Bacteria 54043
25 Ga0068853_100116020 3300005539 Bacteria 2384
26 Ga0068853_100445808 3300005539 Bacteria 1217
27 Ga0070672_100064763 3300005543 Bacteria 2889
28 Ga0070665_100000254 3300005548 Bacteria 88587
29 Ga0068855_100031226 3300005563 Bacteria 6362
30 Ga0068855_100057415 3300005563 Bacteria 4562
31 Ga0068857_100042829 3300005577 Bacteria 4016
32 Ga0068857_100159660 3300005577 Bacteria 2045
33 Ga0068856_100000795 3300005614 Bacteria 34021
34 Ga0068856_100035927 3300005614 Bacteria 4858
35 Ga0068856_100142124 3300005614 Bacteria 2407
36 Ga0068856_100336327 3300005614 Bacteria 1528
37 Ga0068852_100000206 3300005616 Bacteria 40002
38 Ga0068852_100004011 3300005616 Bacteria 10354
39 Ga0068859_100002416 3300005617 Bacteria 19020
40 Ga0068859_100024123 3300005617 Bacteria 6104
41 Ga0068864_100000060 3300005618 Bacteria 124506
42 Ga0068861_100000663 3300005719 Bacteria 20491
43 Ga0068861_100002849 3300005719 Bacteria 11378
44 Ga0068863_100000023 3300005841 Bacteria 186490
45 Ga0068863_100005857 3300005841 Bacteria 12043
46 Ga0068858_100000184 3300005842 Bacteria 66104
47 Ga0068858_100000228 3300005842 Bacteria 60736
48 Ga0068858_100007575 3300005842 Bacteria 10488
49 Ga0068858_100038501 3300005842 Bacteria 4435
50 Ga0068860_100012547 3300005843 Bacteria 8342
51 Ga0068860_100041567 3300005843 Bacteria 4391
52 Ga0068862_100000154 3300005844 Bacteria 78358
53 Ga0068862_100002077 3300005844 Bacteria 18076
54 Ga0081540_1006741 3300005983 Bacteria 8305
55 Ga0075366_10111054 3300006195 Bacteria 1649
56 Ga0075370_10008841 3300006353 Bacteria 5201
57 Ga0068871_100401836 3300006358 Bacteria 1220
58 Ga0097620_100002416 3300006931 Bacteria 19020
59 Ga0097620_100024122 3300006931 Bacteria 6104
60 Ga0105251_10034038 3300009011 Bacteria 2525
61 Ga0105240_10210378 3300009093 Bacteria 2273
62 Ga0105247_10017234 3300009101 Bacteria 4335
63 Ga0105247_10025062 3300009101 Bacteria 3598
64 Ga0105241_10056674 3300009174 Bacteria 3005
65 Ga0105241_10069905 3300009174 Bacteria 2723
66 Ga0105248_10007147 3300009177 Bacteria 12243
67 Ga0105248_10008966 3300009177 Bacteria 10999
68 Ga0105248_10024980 3300009177 Bacteria 6640
69 Ga0105237_10018540 3300009545 Bacteria 7202
70 Ga0105237_10136708 3300009545 Bacteria 2445
71 Ga0105238_10462569 3300009551 Bacteria 1266
72 Ga0105249_10122398 3300009553 Bacteria 2474
73 Ga0105239_10085700 3300010375 Bacteria 3472
74 Ga0105239_10164871 3300010375 Bacteria 2477
75 Ga0157378_10083503 3300013297 Bacteria 2891
76 Ga0163162_10004242 3300013306 Bacteria 13788
77 Ga0163162_10046595 3300013306 Bacteria 4346
78 Ga0157372_10230930 3300013307 Bacteria 2145
79 Ga0163163_10000090 3300014325 Bacteria 97441
80 Ga0163163_10089664 3300014325 Bacteria 3087
81 Ga0163163_10199304 3300014325 Bacteria 2050
82 Ga0157379_10000778 3300014968 Bacteria 25897
83 Ga0157379_10231210 3300014968 Bacteria 1676
84 Ga0207672_1000862 3300025223 Bacteria 3133
85 Ga0207427_100788 3300025231 Bacteria 14422
86 Ga0209148_1000863 3300025254 Bacteria 21228
87 Ga0209233_1000278 3300025261 Bacteria 71989
88 Ga0209455_1000479 3300025272 Bacteria 29764
89 Ga0209050_1000813 3300025298 Bacteria 43681
90 Ga0207697_10025826 3300025315 Bacteria 2401
91 Ga0207682_10054522 3300025893 Bacteria 1661
92 Ga0207688_10116793 3300025901 Bacteria 1554
93 Ga0207647_10028118 3300025904 Bacteria 3657
94 Ga0207645_10039075 3300025907 Bacteria 3041
95 Ga0207695_10169759 3300025913 Bacteria 2108
96 Ga0207695_10342173 3300025913 Bacteria 1383
97 Ga0207657_10000414 3300025919 Bacteria 45279
98 Ga0207657_10045894 3300025919 Bacteria 3830
99 Ga0207657_10290627 3300025919 Bacteria 1296
100 Ga0207681_10000106 3300025923 Bacteria 71721
101 Ga0207694_10315593 3300025924 Bacteria 1289
102 Ga0207650_10105742 3300025925 Bacteria 2173
103 Ga0207659_10003906 3300025926 Bacteria 8988
104 Ga0207659_10078556 3300025926 Bacteria 2432
105 Ga0207644_10000292 3300025931 Bacteria 33037
106 Ga0207644_10003513 3300025931 Bacteria 10146
107 Ga0207686_10108261 3300025934 Bacteria 1869
108 Ga0207670_10046065 3300025936 Bacteria 2895
109 Ga0207669_10022925 3300025937 Bacteria 3325
110 Ga0207669_10047846 3300025937 Bacteria 2536
111 Ga0207691_10069744 3300025940 Bacteria 3175
112 Ga0207711_10009352 3300025941 Bacteria 8184
113 Ga0207711_10009828 3300025941 Bacteria 7957
114 Ga0207711_10043467 3300025941 Bacteria 3833
115 Ga0207667_10026103 3300025949 Bacteria 6387
116 Ga0207667_10026229 3300025949 Bacteria 6369
117 Ga0207667_10030020 3300025949 Bacteria 5887
118 Ga0207712_10145007 3300025961 Bacteria 1827
119 Ga0207703_10000273 3300026035 Bacteria 57186
120 Ga0207703_10000476 3300026035 Bacteria 41990
121 Ga0207703_10002719 3300026035 Bacteria 15153
122 Ga0207639_10061440 3300026041 Bacteria 2902
123 Ga0207678_10023931 3300026067 Bacteria 5340
124 Ga0207702_10000331 3300026078 Bacteria 54217
125 Ga0207702_10115206 3300026078 Bacteria 2397
126 Ga0207702_10200452 3300026078 Bacteria 1849
127 Ga0207702_10235357 3300026078 Bacteria 1713
128 Ga0207641_10000067 3300026088 Bacteria 155379
129 Ga0207641_10001411 3300026088 Bacteria 23684
130 Ga0207641_10018239 3300026088 Bacteria 5753
131 Ga0207676_10000646 3300026095 Bacteria 27901
132 Ga0207674_10065603 3300026116 Bacteria 3658
133 Ga0207674_10179071 3300026116 Bacteria 2072
134 Ga0207675_100001244 3300026118 Bacteria 25447
135 Ga0207675_100003730 3300026118 Bacteria 14838
136 Ga0207675_100024138 3300026118 Bacteria 5653
137 Ga0207675_100048319 3300026118 Bacteria 3972
138 Ga0207698_10000214 3300026142 Bacteria 36073
139 Ga0207698_10001296 3300026142 Bacteria 14578
140 Ga0268266_10000069 3300028379 Bacteria 239714
141 Ga0268266_10043338 3300028379 Bacteria 3845
142 Ga0268266_10356443 3300028379 Bacteria 1375
143 Ga0268265_10000169 3300028380 Bacteria 78493
144 Ga0268265_10000760 3300028380 Bacteria 31315
145 Ga0268264_10001822 3300028381 Bacteria 19507
146 Ga0268264_10030572 3300028381 Bacteria 4414
147 Ga0307515_10027785 3300028794 Bacteria 9651
148 Ga0307515_10062395 3300028794 Bacteria 5262
149 Ga0265332_10047024 3300031238 Bacteria 1858
150 Ga0265328_10037123 3300031239 Bacteria 1800
151 Ga0265325_10003232 3300031241 Bacteria 10728
152 Ga0265339_10007325 3300031249 Bacteria 7146
153 Ga0307408_100040407 3300031548 Bacteria 3303
154 Ga0265314_10000590 3300031711 Bacteria 45642
155 Ga0265342_10001737 3300031712 Bacteria 19900
156 Ga0307412_10002306 3300031911 Bacteria 10562
157 Ga0307409_100024871 3300031995 Bacteria 4187
158 Ga0395900_0000052 3300037418 Bacteria 223910
159 Ga0395900_0007968 3300037418 Bacteria 10903
160 Ga0395898_0012979 3300037466 Bacteria 8590
161 Ga0395898_0077624 3300037466 Bacteria 3206
162 Ga0395905_0015761 3300037471 Bacteria 7180
163 Ga0395905_0022032 3300037471 Bacteria 6028
164 Ga0395905_0062027 3300037471 Bacteria 3497
165 Ga0395905_0083158 3300037471 Bacteria 2999
166 Ga0395905_0129932 3300037471 Bacteria 2369
167 Ga0395901_0000001 3300038443 Bacteria 800383
168 Ga0395901_0019255 3300038443 Bacteria 6978
169 Ga0395901_0030692 3300038443 Bacteria 5538
170 Ga0451802_0323676 3300041460 Bacteria 3762
171 Ga0439455_0000937 3300042012 Bacteria 4548
172 Ga0439455_0009223 3300042012 Bacteria 2135
173 Ga0439458_0000332 3300042157 Bacteria 11804
174 Ga0466972_0006938 3300044658 Bacteria 5678
175 Ga0466964_0007867 3300044706 Bacteria 3992
176 Ga0466968_0097219 3300044735 Bacteria 1311
177 Ga0466960_0004923 3300044901 Bacteria 5255
178 Ga0495627_000548 3300046453 Bacteria 30996
179 Ga0495590_0002396 3300046457 Bacteria 7765
180 Ga0495638_0037892 3300046460 Bacteria 3067
181 Ga0495585_0000988 3300046492 Bacteria 23843
182 Ga0495583_0000023 3300046506 Bacteria 280019
183 Ga0495631_0028296 3300046518 Bacteria 2557
184 Ga0495668_0026936 3300046616 Bacteria 3259
185 Ga0495661_0174032 3300046665 Bacteria 1145
186 Ga0495670_0017199 3300046691 Bacteria 3558
187 Ga0495672_0104834 3300047320 Bacteria 1527
188 Ga0495687_013189 3300047443 Bacteria 4327
189 Ga0495673_0000083 3300047469 Bacteria 198298
190 Ga0495686_0000638 3300047472 Bacteria 48292
191 Ga0495686_0055322 3300047472 Bacteria 2482
192 Ga0496107_0050530 3300048910 Bacteria 2997
193 Ga0496121_0002303 3300048924 Bacteria 29622
194 Ga0496121_0002379 3300048924 Bacteria 28899
195 Ga0496123_0002002 3300048926 Bacteria 26314
196 Ga0496124_0001778 3300048927 Bacteria 29985
197 Ga0496124_0006324 3300048927 Bacteria 12931
198 Ga0496125_0035480 3300048928 Bacteria 4373
199 Ga0496126_0043265 3300048929 Bacteria 4155
200 Ga0495682_0008137 3300049460 Bacteria 4142
201 Ga0501033_0068399 3300049570 Bacteria 2611
202 Ga0501047_0068696 3300049581 Bacteria 3413
203 Ga0501073_0100749 3300049589 Bacteria 2006
204 Ga0501083_0108780 3300049744 Bacteria 1823
205 Ga0501035_0309503 3300049822 Bacteria 1329
206 Ga0500555_000417 3300053103 Bacteria 17761
207 Ga0500592_001077 3300053116 Bacteria 4455
208 Ga0500573_0000009 3300053140 Bacteria 230823
209 Ga0500622_0000184 3300053156 Bacteria 67149
210 Ga0500622_0006428 3300053156 Bacteria 6813
211 Ga0501082_0286669 3300060353 Bacteria 1433

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005614 Ga0068856_100142124 Ga0068856_1001421242 274
2 3300026078 Ga0207702_10200452 Ga0207702_102004522 274
3 3300005340 Ga0070689_100001657 Ga0070689_1000016577 288
4 3300005353 Ga0070669_100000099 Ga0070669_1000000998 288
5 3300005365 Ga0070688_100002008 Ga0070688_1000020082 288
6 3300005466 Ga0070685_10000101 Ga0070685_1000010146 288
7 3300005543 Ga0070672_100064763 Ga0070672_1000647632 288
8 3300005548 Ga0070665_100000254 Ga0070665_10000025427 288
9 3300005617 Ga0068859_100024123 Ga0068859_1000241235 288
10 3300005842 Ga0068858_100007575 Ga0068858_1000075758 288
11 3300006931 Ga0097620_100024122 Ga0097620_1000241224 288
12 3300009011 Ga0105251_10034038 Ga0105251_100340382 288
13 3300014325 Ga0163163_10089664 Ga0163163_100896643 288
14 3300025923 Ga0207681_10000106 Ga0207681_1000010678 288
15 3300025936 Ga0207670_10046065 Ga0207670_100460652 288
16 3300025940 Ga0207691_10069744 Ga0207691_100697443 288
17 3300026035 Ga0207703_10002719 Ga0207703_100027197 288
18 3300026118 Ga0207675_100003730 Ga0207675_1000037309 288
19 3300028379 Ga0268266_10000069 Ga0268266_10000069153 288
20 3300046518 Ga0495631_0028296 Ga0495631_0028296_1337_2482 295
21 3300047472 Ga0495686_0000638 Ga0495686_0000638_31317_32462 295
22 3300048910 Ga0496107_0050530 Ga0496107_0050530_1317_2477 295
23 3300028794 Ga0307515_10027785 Ga0307515_100277852 299
24 3300005339 Ga0070660_100000402 Ga0070660_10000040218 300
25 3300005539 Ga0068853_100116020 Ga0068853_1001160201 300
26 3300005563 Ga0068855_100031226 Ga0068855_1000312265 300
27 3300025919 Ga0207657_10000414 Ga0207657_1000041440 300
28 3300025949 Ga0207667_10026103 Ga0207667_100261035 300
29 3300026041 Ga0207639_10061440 Ga0207639_100614403 300
30 3300049570 Ga0501033_0068399 Ga0501033_0068399_1202_2356 300
31 3300049581 Ga0501047_0068696 Ga0501047_0068696_1773_2927 300
32 3300049822 Ga0501035_0309503 Ga0501035_0309503_154_1308 300
33 3300013307 Ga0157372_10230930 Ga0157372_102309302 302
34 3300048924 Ga0496121_0002303 Ga0496121_0002303_15286_16443 302
35 3300041460 Ga0451802_0323676 Ga0451802_0323676_1899_3053 303
36 3300025254 Ga0209148_1000863 Ga0209148_100086312 305
37 3300025272 Ga0209455_1000479 Ga0209455_10004792 305
38 3300025919 Ga0207657_10045894 Ga0207657_100458942 305
39 3300037471 Ga0395905_0022032 Ga0395905_0022032_1648_2646 306
40 3300047469 Ga0495673_0000083 Ga0495673_0000083_111566_112708 306
41 3300005331 Ga0070670_100117828 Ga0070670_1001178282 307
42 3300005719 Ga0068861_100000663 Ga0068861_1000006636 307
43 3300005842 Ga0068858_100000184 Ga0068858_10000018447 307
44 3300014325 Ga0163163_10199304 Ga0163163_101993042 307
45 3300025925 Ga0207650_10105742 Ga0207650_101057421 307
46 3300026035 Ga0207703_10000273 Ga0207703_1000027347 307
47 3300026118 Ga0207675_100001244 Ga0207675_10000124410 307
48 3300048928 Ga0496125_0035480 Ga0496125_0035480_628_1764 307
49 3300009093 Ga0105240_10210378 Ga0105240_102103782 309
50 3300025913 Ga0207695_10342173 Ga0207695_103421731 309
51 3300047320 Ga0495672_0104834 Ga0495672_0104834_181_1341 309
52 3300031712 Ga0265342_10001737 Ga0265342_100017372 310
53 3300005577 Ga0068857_100042829 Ga0068857_1000428293 312
54 3300005614 Ga0068856_100035927 Ga0068856_1000359272 312
55 3300005616 Ga0068852_100004011 Ga0068852_1000040112 312
56 3300026116 Ga0207674_10065603 Ga0207674_100656032 312
57 3300026142 Ga0207698_10000214 Ga0207698_1000021433 312
58 3300031239 Ga0265328_10037123 Ga0265328_100371232 312
59 3300031241 Ga0265325_10003232 Ga0265325_100032328 312
60 3300031249 Ga0265339_10007325 Ga0265339_100073252 312
61 3300031711 Ga0265314_10000590 Ga0265314_1000059038 312
62 3300037471 Ga0395905_0129932 Ga0395905_0129932_595_1740 312
63 3300025934 Ga0207686_10108261 Ga0207686_101082612 313
64 3300025941 Ga0207711_10009828 Ga0207711_100098285 313
65 3300044658 Ga0466972_0006938 Ga0466972_0006938_3598_4743 313
66 3300044706 Ga0466964_0007867 Ga0466964_0007867_2466_3611 313
67 3300044735 Ga0466968_0097219 Ga0466968_0097219_60_1205 313
68 3300044901 Ga0466960_0004923 Ga0466960_0004923_3273_4418 313
69 3300005354 Ga0070675_100090483 Ga0070675_1000904832 314
70 3300006195 Ga0075366_10111054 Ga0075366_101110542 314
71 3300006353 Ga0075370_10008841 Ga0075370_100088414 314
72 3300025893 Ga0207682_10054522 Ga0207682_100545222 314
73 3300025926 Ga0207659_10078556 Ga0207659_100785562 314
74 3300031548 Ga0307408_100040407 Ga0307408_1000404073 314
75 3300031995 Ga0307409_100024871 Ga0307409_1000248712 314
76 3300003322 rootL2_10072698 rootL2_100726982 315
77 3300006358 Ga0068871_100401836 Ga0068871_1004018361 315
78 3300046457 Ga0495590_0002396 Ga0495590_0002396_5001_6146 315
79 3300053156 Ga0500622_0000184 Ga0500622_0000184_34782_35927 315
80 3300005617 Ga0068859_100002416 Ga0068859_1000024168 316
81 3300006931 Ga0097620_100002416 Ga0097620_1000024168 316
82 3300053140 Ga0500573_0000009 Ga0500573_0000009_120267_121337 316
83 3300046453 Ga0495627_000548 Ga0495627_000548_25145_26290 318
84 3300028794 Ga0307515_10062395 Ga0307515_100623952 320
85 3300005843 Ga0068860_100041567 Ga0068860_1000415673 321
86 3300028381 Ga0268264_10030572 Ga0268264_100305723 321
87 3300005618 Ga0068864_100000060 Ga0068864_10000006034 322
88 3300005841 Ga0068863_100000023 Ga0068863_10000002396 322
89 3300009101 Ga0105247_10017234 Ga0105247_100172343 322
90 3300026088 Ga0207641_10000067 Ga0207641_10000067123 322
91 3300026095 Ga0207676_10000646 Ga0207676_1000064619 322
92 3300031238 Ga0265332_10047024 Ga0265332_100470242 322
93 3300031911 Ga0307412_10002306 Ga0307412_100023066 322
94 3300005295 Ga0065707_10086971 Ga0065707_100869712 323
95 3300037418 Ga0395900_0000052 Ga0395900_0000052_62189_63304 325
96 3300037466 Ga0395898_0012979 Ga0395898_0012979_3768_4883 325
97 3300037471 Ga0395905_0015761 Ga0395905_0015761_4729_5844 325
98 3300038443 Ga0395901_0000001 Ga0395901_0000001_724696_725811 325
99 3300048929 Ga0496126_0043265 Ga0496126_0043265_511_1653 325
100 3300005983 Ga0081540_1006741 Ga0081540_10067416 326
101 3300037471 Ga0395905_0062027 Ga0395905_0062027_1470_2588 326
102 3300005614 Ga0068856_100336327 Ga0068856_1003363272 327
103 3300009177 Ga0105248_10008966 Ga0105248_100089666 327
104 3300026078 Ga0207702_10235357 Ga0207702_102353573 327
105 3300053156 Ga0500622_0006428 Ga0500622_0006428_5385_6581 327
106 3300005355 Ga0070671_100014735 Ga0070671_1000147352 328
107 3300005356 Ga0070674_100069716 Ga0070674_1000697162 328
108 3300005457 Ga0070662_100206874 Ga0070662_1002068741 328
109 3300025931 Ga0207644_10003513 Ga0207644_100035135 328
110 3300025937 Ga0207669_10047846 Ga0207669_100478462 328
111 3300026067 Ga0207678_10023931 Ga0207678_100239315 328
112 3300042012 Ga0439455_0000937 Ga0439455_0000937_2160_3314 328
113 3300042157 Ga0439458_0000332 Ga0439458_0000332_1606_2748 328
114 3300046492 Ga0495585_0000988 Ga0495585_0000988_18977_20134 329
115 3300047472 Ga0495686_0055322 Ga0495686_0055322_734_1891 329
116 3300046616 Ga0495668_0026936 Ga0495668_0026936_2076_3131 331
117 3300053116 Ga0500592_001077 Ga0500592_001077_2828_3886 331
118 3300037418 Ga0395900_0007968 Ga0395900_0007968_6980_8098 332
119 3300037471 Ga0395905_0083158 Ga0395905_0083158_1801_2919 332
120 3300005841 Ga0068863_100005857 Ga0068863_1000058572 334
121 3300026088 Ga0207641_10018239 Ga0207641_100182394 334
122 3300005563 Ga0068855_100057415 Ga0068855_1000574153 335
123 3300025949 Ga0207667_10026229 Ga0207667_100262295 335
124 3300038443 Ga0395901_0019255 Ga0395901_0019255_177_1295 335
125 3300046665 Ga0495661_0174032 Ga0495661_0174032_58_1119 337
126 3300005577 Ga0068857_100159660 Ga0068857_1001596602 338
127 3300005842 Ga0068858_100038501 Ga0068858_1000385012 338
128 3300009174 Ga0105241_10069905 Ga0105241_100699052 338
129 3300009545 Ga0105237_10018540 Ga0105237_100185407 338
130 3300009553 Ga0105249_10122398 Ga0105249_101223982 338
131 3300013297 Ga0157378_10083503 Ga0157378_100835034 338
132 3300014968 Ga0157379_10231210 Ga0157379_102312102 338
133 3300025941 Ga0207711_10009352 Ga0207711_100093526 338
134 3300025961 Ga0207712_10145007 Ga0207712_101450072 338
135 3300026116 Ga0207674_10179071 Ga0207674_101790712 338
136 3300026118 Ga0207675_100048319 Ga0207675_1000483192 338
137 3300028379 Ga0268266_10356443 Ga0268266_103564431 338
138 3300048926 Ga0496123_0002002 Ga0496123_0002002_8089_9240 338
139 3300048927 Ga0496124_0001778 Ga0496124_0001778_11189_12340 338
140 3300009177 Ga0105248_10024980 Ga0105248_100249802 339
141 3300049589 Ga0501073_0100749 Ga0501073_0100749_607_1677 339
142 3300049744 Ga0501083_0108780 Ga0501083_0108780_345_1415 339
143 3300060353 Ga0501082_0286669 Ga0501082_0286669_40_1110 339
144 3300010375 Ga0105239_10085700 Ga0105239_100857003 340
145 3300014325 Ga0163163_10000090 Ga0163163_1000009016 340
146 3300014968 Ga0157379_10000778 Ga0157379_1000077810 340
147 3300025298 Ga0209050_1000813 Ga0209050_100081350 342
148 3300048927 Ga0496124_0006324 Ga0496124_0006324_6281_7432 342
149 3300005843 Ga0068860_100012547 Ga0068860_1000125472 343
150 3300005844 Ga0068862_100000154 Ga0068862_10000015427 343
151 3300028380 Ga0268265_10000169 Ga0268265_1000016926 343
152 3300028381 Ga0268264_10001822 Ga0268264_1000182211 343
153 3300048924 Ga0496121_0002379 Ga0496121_0002379_25863_27014 343
154 3300003214 JGI25165J46597_1000320 JGI25165J46597_100032038 344
155 3300025231 Ga0207427_100788 Ga0207427_10078811 344
156 3300025261 Ga0209233_1000278 Ga0209233_100027816 344
157 3300005327 Ga0070658_10055565 Ga0070658_100555652 348
158 3300005539 Ga0068853_100445808 Ga0068853_1004458081 348
159 3300009174 Ga0105241_10056674 Ga0105241_100566742 348
160 3300009545 Ga0105237_10136708 Ga0105237_101367082 348
161 3300009551 Ga0105238_10462569 Ga0105238_104625692 348
162 3300010375 Ga0105239_10164871 Ga0105239_101648712 348
163 3300025913 Ga0207695_10169759 Ga0207695_101697591 348
164 3300025924 Ga0207694_10315593 Ga0207694_103155931 348
165 3300025949 Ga0207667_10030020 Ga0207667_100300203 348
166 3300028379 Ga0268266_10043338 Ga0268266_100433382 348
167 3300037466 Ga0395898_0077624 Ga0395898_0077624_158_1252 348
168 3300038443 Ga0395901_0030692 Ga0395901_0030692_4307_5401 348
169 3300002074 JGI24748J21848_1000085 JGI24748J21848_100008516 349
170 3300002239 JGI24034J26672_10000069 JGI24034J26672_1000006914 349
171 3300005355 Ga0070671_100006363 Ga0070671_1000063638 349
172 3300005719 Ga0068861_100002849 Ga0068861_10000284910 349
173 3300005844 Ga0068862_100002077 Ga0068862_1000020775 349
174 3300009101 Ga0105247_10025062 Ga0105247_100250622 349
175 3300025223 Ga0207672_1000862 Ga0207672_10008622 349
176 3300025931 Ga0207644_10000292 Ga0207644_1000029210 349
177 3300026088 Ga0207641_10001411 Ga0207641_100014119 349
178 3300026118 Ga0207675_100024138 Ga0207675_1000241382 349
179 3300028380 Ga0268265_10000760 Ga0268265_100007605 349
180 3300026078 Ga0207702_10115206 Ga0207702_101152062 351
181 iso_pu_bacteria 2884960567 2884964962 352
182 iso_pu_bacteria 2526164512 2526213646 354
183 iso_pu_bacteria 2738543031 2739350464 355
184 3300005335 Ga0070666_10050043 Ga0070666_100500432 358
185 3300013306 Ga0163162_10004242 Ga0163162_100042428 358
186 3300013306 Ga0163162_10046595 Ga0163162_100465955 358
187 3300025315 Ga0207697_10025826 Ga0207697_100258262 358
188 3300005842 Ga0068858_100000228 Ga0068858_10000022857 359
189 3300009177 Ga0105248_10007147 Ga0105248_1000714715 359
190 3300025941 Ga0207711_10043467 Ga0207711_100434673 359
191 3300026035 Ga0207703_10000476 Ga0207703_1000047620 359
192 iso_pu_bacteria 2751185897 2753765633 359
193 3300005356 Ga0070674_100025378 Ga0070674_1000253783 360
194 3300025937 Ga0207669_10022925 Ga0207669_100229253 360
195 3300005614 Ga0068856_100000795 Ga0068856_10000079528 361
196 3300005616 Ga0068852_100000206 Ga0068852_10000020610 361
197 3300026078 Ga0207702_10000331 Ga0207702_1000033110 361
198 3300026142 Ga0207698_10001296 Ga0207698_1000129610 361
199 3300047443 Ga0495687_013189 Ga0495687_013189_1656_2801 361
200 3300042012 Ga0439455_0009223 Ga0439455_0009223_31_1176 363
201 iso_pu_bacteria 2928100450 2928103295 364
202 3300001990 JGI24737J22298_10006190 JGI24737J22298_100061905 365
203 3300002067 JGI24735J21928_10014464 JGI24735J21928_100144642 365
204 3300002077 JGI24744J21845_10005026 JGI24744J21845_100050262 365
205 3300005339 Ga0070660_100196054 Ga0070660_1001960542 365
206 3300005354 Ga0070675_100011122 Ga0070675_1000111222 365
207 3300025901 Ga0207688_10116793 Ga0207688_101167932 365
208 3300025904 Ga0207647_10028118 Ga0207647_100281182 365
209 3300025907 Ga0207645_10039075 Ga0207645_100390752 365
210 3300025919 Ga0207657_10290627 Ga0207657_102906271 365
211 3300025926 Ga0207659_10003906 Ga0207659_100039068 365
212 3300046460 Ga0495638_0037892 Ga0495638_0037892_1820_2986 365
213 3300046506 Ga0495583_0000023 Ga0495583_0000023_117096_118319 365
214 3300046691 Ga0495670_0017199 Ga0495670_0017199_1759_2925 365
215 3300049460 Ga0495682_0008137 Ga0495682_0008137_2051_3217 365
216 3300053103 Ga0500555_000417 Ga0500555_000417_5160_6326 365
217 iso_pu_bacteria 2919138771 2919141934 365

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13533

Biotin_lipoyl_2

Biotin-lipoyl like

90

139

0.96

PF16576

HlyD_D23

Barrel-sandwich domain of CusB or HlyD membrane-fusion

198

349

0.87

PF00529

CusB_dom_1

Cation efflux system protein CusB domain 1

56

405

0.78

PF13437

HlyD_3

HlyD family secretion protein

275

396

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ks8-assembly1.cif.gz_D crystal structure of two-subunit pyruvate carboxylase from methylobacillus flagellatus 0.9596 68 97
7wtb-assembly1.cif.gz_A cryo-em structure of human pyruvate carboxylase with acetyl-coa 0.8991 67 97
5gua-assembly1.cif.gz_A structure of biotin carboxyl carrier protein from pyrococcus horikoshi ot3 (delta n79) a138y mutant 0.8888 64 262
4qsh-assembly1.cif.gz_D crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.8877 67 263
4qsh-assembly1.cif.gz_B crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.8874 67 263
ID Description Score Start End Superfamily
1vf7M03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9866 142 197 1.10.287.470
4l8jA03 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9847 64 264 2.40.50.100
1vf7L03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9842 142 197 1.10.287.470
1vf7B03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9832 142 197 1.10.287.470
1t5eB03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9807 142 197 1.10.287.470
ID Description Score Start End GO Terms
AF-A0A3A0FPX5-F1-model_v4 RND efflux pump membrane fusion protein barrel-sandwich domain-containing protein 0.766 52 364 GO:0005886
GO:0015679
GO:0022857
GO:0030313
GO:0060003
AF-G8TXJ1-F1-model_v4 Biotin/lipoyl attachment domain-containing protein 0.7647 26 362 GO:0030313
AF-A0A172ZBH9-F1-model_v4 Hemolysin D 0.7524 24 364 GO:0030313
AF-G8TXJ1-F1-model_v4 Biotin/lipoyl attachment domain-containing protein 0.7515 26 362 GO:0030313
AF-A0A0E3M9H8-F1-model_v4 EmrA-related transporter protein 0.749 21 364 GO:0016020

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pLDDT pTM Quality
79.91 0.53 Medium
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Predicted Structure (AlphaFold2)

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