F329282

General Info

Members Datasets Scaffolds Average Seq Length
217 150 434 596

Family's Representative Sequence

Representative Sequence 3300050508|nmdc:mga09592_28871_c1|nmdc:mga09592_28871_c1_2450_4447
Length 665
Sequence VAEDPHQEEVLGKAYDARLMRRLVAYVRPYRGQMALAVALIVLSAALELVGPLATAVALDLFVRPAGGGRPSGVSRWVLEQLASRGLSLDRAEGLAWCAGVYLLSLLSTFVVLYWQSYVMQLMGQRIMRDLRREVFGHLQRLQVSFFDRNPVGRLVTRATTDVDALNELFTAGLVSVFGDVMTLLGIVVVLFALDWRLALVTFSILPLLLLLTLWFKSRARDMYREVRIWIARINAFLQEHISGMSVVQLFGREKVTLAAFRDINRRHRDVNVKAIYYYAVYYPAVELITSLGLALIIWYGGGKVLQGAVSIGALVAFFQYAQRFYEPISDLSDKYNILQAAMASSERIFRLLDAPVSIASPAEPHRPEPLAAEPVSGRSVPSGPRPRAIRGMVELDHVGFEYNPGEPVLRDVSFRIEPGQSVAVVGHTGAGKSTLASLLLRFYDPTAGSVRIDGVDARLWDVQTLRRGIAMVLQDVFLFAGNLADNVTLGDPAISRERLRWAAGEARALDFVERLPQGFESTVHERGAGLSVGQKQLISFARALAFDPAILILDEATSSVDTETEQRIQEALDRLLVGRTSLVIAHRLSTVQRCDRILVMHKGEVREQGTHQELLAKRGIYYRLYLLQYRDQLGTPGEAGPVPDVALPPAPDDALIGGEPHHRA

Samples

Sample ID Description Type Environment
1 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
65 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
97 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
98 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
99 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
100 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
101 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
102 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
103 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
104 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
105 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
106 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
107 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
108 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
109 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
110 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
111 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
112 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
113 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
114 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
115 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
116 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
117 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
118 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
119 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
120 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
121 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
122 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
125 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
126 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
127 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
128 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
129 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
137 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
138 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
143 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
144 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
147 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
148 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
150 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.46
Rhizosphere 96.31
Stem 0
Stem Tuber 0
Unclassified 4.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga09592_28871_c1 3300050508 Bacteria 4611
2 Ga0065715_10117936 3300005293 Bacteria 2331
3 Ga0070658_10007952 3300005327 Bacteria 8533
4 Ga0070683_100000216 3300005329 Bacteria 39311
5 Ga0070690_100009927 3300005330 Bacteria 5525
6 Ga0070670_100000226 3300005331 Bacteria 52113
7 Ga0070670_100001470 3300005331 Bacteria 18967
8 Ga0068869_100018921 3300005334 Bacteria 4696
9 Ga0070666_10002505 3300005335 Bacteria 11107
10 Ga0070666_10010505 3300005335 Bacteria 5793
11 Ga0070666_10024971 3300005335 Bacteria 3894
12 Ga0070666_10044514 3300005335 Bacteria 2973
13 Ga0070680_100014246 3300005336 Bacteria 6208
14 Ga0070682_100000001 3300005337 Bacteria 569837
15 Ga0068868_100000072 3300005338 Bacteria 59008
16 Ga0068868_100000567 3300005338 Bacteria 24765
17 Ga0068868_100023672 3300005338 Unclassified 4651
18 Ga0070660_100085567 3300005339 Bacteria 2480
19 Ga0070689_100001939 3300005340 Bacteria 13392
20 Ga0070661_100027112 3300005344 Unclassified 4124
21 Ga0070692_10000392 3300005345 Bacteria 13053
22 Ga0070669_100000051 3300005353 Bacteria 114909
23 Ga0070675_100000002 3300005354 Bacteria 435215
24 Ga0070674_100054859 3300005356 Bacteria 2758
25 Ga0070667_100002082 3300005367 Bacteria 17707
26 Ga0070667_100027711 3300005367 Bacteria 4715
27 Ga0070709_10000004 3300005434 Bacteria 214262
28 Ga0070714_100000039 3300005435 Bacteria 121007
29 Ga0070713_100014366 3300005436 Bacteria 5878
30 Ga0070701_10000041 3300005438 Bacteria 32521
31 Ga0070700_100000078 3300005441 Bacteria 65986
32 Ga0070707_100061607 3300005468 Bacteria 3599
33 Ga0070699_100030940 3300005518 Bacteria 4621
34 Ga0070684_100000497 3300005535 Bacteria 27113
35 Ga0070672_100001366 3300005543 Bacteria 15052
36 Ga0070672_100005663 3300005543 Bacteria 8317
37 Ga0070665_100000216 3300005548 Bacteria 98310
38 Ga0070704_100018053 3300005549 Bacteria 4501
39 Ga0070664_100002178 3300005564 Bacteria 15737
40 Ga0070664_100082928 3300005564 Bacteria 2765
41 Ga0068857_100040940 3300005577 Bacteria 4107
42 Ga0068854_100006655 3300005578 Bacteria 7364
43 Ga0068859_100000021 3300005617 Bacteria 236322
44 Ga0068859_100043377 3300005617 Unclassified 4520
45 Ga0068864_100000117 3300005618 Bacteria 78069
46 Ga0068864_100002907 3300005618 Bacteria 14162
47 Ga0068863_100003103 3300005841 Bacteria 16402
48 Ga0068863_100164635 3300005841 Bacteria 2126
49 Ga0068858_100001445 3300005842 Bacteria 24428
50 Ga0068858_100072686 3300005842 Unclassified 3191
51 Ga0068862_100003829 3300005844 Bacteria 12812
52 Ga0070717_10000117 3300006028 Bacteria 61723
53 Ga0070712_100063691 3300006175 Bacteria 2612
54 Ga0075428_100013760 3300006844 Bacteria 9011
55 Ga0075428_100014615 3300006844 Bacteria 8720
56 Ga0075430_100023840 3300006846 Bacteria 5210
57 Ga0075431_100002249 3300006847 Bacteria 18505
58 Ga0075431_100006501 3300006847 Bacteria 11598
59 Ga0075431_100036763 3300006847 Bacteria 5044
60 Ga0075429_100022241 3300006880 Bacteria 5501
61 Ga0075429_100025595 3300006880 Bacteria 5122
62 Ga0075429_100029799 3300006880 Bacteria 4740
63 Ga0097620_100000021 3300006931 Bacteria 236322
64 Ga0097620_100043376 3300006931 Unclassified 4520
65 Ga0075435_100000082 3300007076 Bacteria 50118
66 Ga0075435_100058781 3300007076 Bacteria 3115
67 Ga0105240_10026503 3300009093 Bacteria 7606
68 Ga0111539_10000053 3300009094 Bacteria 115976
69 Ga0105245_10000024 3300009098 Bacteria 178565
70 Ga0105245_10003856 3300009098 Bacteria 13348
71 Ga0114129_10000576 3300009147 Bacteria 45211
72 Ga0114129_10039933 3300009147 Bacteria 6620
73 Ga0105242_10068267 3300009176 Bacteria 2941
74 Ga0105248_10003333 3300009177 Bacteria 17841
75 Ga0105238_10000001 3300009551 Bacteria 2036163
76 Ga0105246_10021611 3300011119 Bacteria 4143
77 Ga0157369_10000654 3300013105 Bacteria 44821
78 Ga0157374_10000012 3300013296 Bacteria 462353
79 Ga0157378_10000269 3300013297 Bacteria 50584
80 Ga0157378_10000600 3300013297 Bacteria 33795
81 Ga0157378_10068586 3300013297 Bacteria 3180
82 Ga0157378_10085939 3300013297 Bacteria 2851
83 Ga0163162_10000740 3300013306 Bacteria 30360
84 Ga0157372_10078791 3300013307 Bacteria 3724
85 Ga0157375_10000001 3300013308 Bacteria 696576
86 Ga0157375_10000008 3300013308 Bacteria 373560
87 Ga0157375_10000106 3300013308 Bacteria 82080
88 Ga0157375_10000523 3300013308 Bacteria 34505
89 Ga0163163_10042329 3300014325 Unclassified 4460
90 Ga0157377_10000002 3300014745 Bacteria 473827
91 Ga0157377_10000126 3300014745 Bacteria 49710
92 Ga0157376_10000020 3300014969 Bacteria 246318
93 Ga0213873_10000002 3300021358 Bacteria 1164195
94 Ga0213876_10000001 3300021384 Bacteria 1186326
95 Ga0213876_10000173 3300021384 Bacteria 67175
96 Ga0207680_10002231 3300025903 Bacteria 9034
97 Ga0207699_10000033 3300025906 Bacteria 137438
98 Ga0207695_10076550 3300025913 Bacteria 3401
99 Ga0207660_10026072 3300025917 Bacteria 3977
100 Ga0207646_10071648 3300025922 Bacteria 3095
101 Ga0207681_10000043 3300025923 Bacteria 136641
102 Ga0207694_10000001 3300025924 Bacteria 4078485
103 Ga0207650_10000218 3300025925 Bacteria 65326
104 Ga0207650_10007462 3300025925 Bacteria 7452
105 Ga0207650_10019407 3300025925 Bacteria 4777
106 Ga0207650_10123920 3300025925 Bacteria 2015
107 Ga0207659_10000005 3300025926 Bacteria 405839
108 Ga0207687_10000003 3300025927 Bacteria 875159
109 Ga0207687_10000550 3300025927 Bacteria 25194
110 Ga0207687_10015701 3300025927 Bacteria 4969
111 Ga0207664_10001419 3300025929 Bacteria 15768
112 Ga0207686_10013687 3300025934 Bacteria 4495
113 Ga0207704_10051955 3300025938 Bacteria 2482
114 Ga0207691_10006102 3300025940 Bacteria 11645
115 Ga0207691_10039554 3300025940 Unclassified 4362
116 Ga0207661_10000044 3300025944 Bacteria 115753
117 Ga0207651_10004197 3300025960 Bacteria 7217
118 Ga0207640_10004716 3300025981 Bacteria 7401
119 Ga0207658_10025693 3300025986 Bacteria 4124
120 Ga0207658_10124782 3300025986 Bacteria 2058
121 Ga0207677_10000009 3300026023 Bacteria 252751
122 Ga0207677_10000090 3300026023 Bacteria 74352
123 Ga0207677_10027548 3300026023 Unclassified 3581
124 Ga0207703_10000609 3300026035 Bacteria 36301
125 Ga0207639_10000003 3300026041 Bacteria 806887
126 Ga0207708_10000018 3300026075 Bacteria 188140
127 Ga0207702_10030359 3300026078 Bacteria 4504
128 Ga0207648_10055163 3300026089 Bacteria 3470
129 Ga0207676_10000393 3300026095 Bacteria 37094
130 Ga0207676_10007615 3300026095 Bacteria 7688
131 Ga0207674_10034750 3300026116 Bacteria 5266
132 Ga0207428_10000061 3300027907 Bacteria 155152
133 Ga0268266_10000245 3300028379 Bacteria 91853
134 Ga0268265_10000290 3300028380 Bacteria 56705
135 Ga0268264_10002291 3300028381 Bacteria 16954
136 Ga0265337_1014456 3300028556 Bacteria 2616
137 Ga0265326_10001108 3300028558 Bacteria 9578
138 Ga0265326_10008253 3300028558 Unclassified 3147
139 Ga0265319_1000047 3300028563 Bacteria 101105
140 Ga0265319_1000112 3300028563 Bacteria 62336
141 Ga0265319_1025779 3300028563 Bacteria 2101
142 Ga0265334_10001911 3300028573 Bacteria 9882
143 Ga0265318_10001786 3300028577 Bacteria 12232
144 Ga0265323_10000107 3300028653 Bacteria 48675
145 Ga0265322_10000164 3300028654 Bacteria 30408
146 Ga0265336_10001411 3300028666 Bacteria 11085
147 Ga0265338_10001635 3300028800 Bacteria 35866
148 Ga0265338_10003909 3300028800 Bacteria 20575
149 Ga0265324_10004559 3300029957 Bacteria 6203
150 Ga0307511_10000562 3300030521 Bacteria 39912
151 Ga0265332_10000901 3300031238 Bacteria 17832
152 Ga0265328_10001074 3300031239 Bacteria 12584
153 Ga0265320_10001097 3300031240 Bacteria 19985
154 Ga0265320_10015721 3300031240 Bacteria 4268
155 Ga0265325_10006944 3300031241 Bacteria 6828
156 Ga0265329_10000247 3300031242 Bacteria 29026
157 Ga0265340_10005968 3300031247 Bacteria 6731
158 Ga0265340_10009155 3300031247 Bacteria 5326
159 Ga0265339_10000527 3300031249 Bacteria 29911
160 Ga0265331_10001890 3300031250 Bacteria 14731
161 Ga0265316_10000869 3300031344 Bacteria 33204
162 Ga0265316_10013203 3300031344 Bacteria 7357
163 Ga0265316_10073912 3300031344 Unclassified 2625
164 Ga0265316_10086108 3300031344 Bacteria 2403
165 Ga0265313_10004463 3300031595 Bacteria 10729
166 Ga0265313_10030001 3300031595 Bacteria 2806
167 Ga0265314_10000357 3300031711 Bacteria 63729
168 Ga0265342_10000570 3300031712 Bacteria 38944
169 Ga0265342_10050092 3300031712 Bacteria 2496
170 Ga0373932_0000690 3300035112 Bacteria 10222
171 Ga0373961_0001709 3300035241 Bacteria 6106
172 Ga0373935_0016076 3300035692 Bacteria 4528
173 Ga0373937_0019633 3300036401 Bacteria 6050
174 Ga0395901_0001977 3300038443 Bacteria 21078
175 Ga0436365_0036525 3300039437 Bacteria 4944
176 Ga0436365_0587160 3300039437 Bacteria 47503
177 Ga0436365_0774883 3300039437 Bacteria 390569
178 Ga0436365_0895794 3300039437 Bacteria 8005
179 Ga0436362_0660519 3300039453 Bacteria 832172
180 Ga0436362_1152295 3300039453 Bacteria 9883
181 Ga0451577_0000182 3300042876 Bacteria 133479
182 Ga0451577_0001342 3300042876 Bacteria 33389
183 Ga0451577_0091385 3300042876 Bacteria 2717
184 Ga0453683_0006534 3300044673 Bacteria 7994
185 Ga0453683_0043722 3300044673 Bacteria 2811
186 Ga0453684_0000038 3300044712 Bacteria 706970
187 Ga0453684_0000354 3300044712 Bacteria 190599
188 Ga0453684_0000949 3300044712 Bacteria 95680
189 Ga0453684_0001735 3300044712 Bacteria 58368
190 Ga0453684_0009071 3300044712 Bacteria 17541
191 Ga0495620_0001860 3300046515 Bacteria 12422
192 Ga0496114_0000015 3300048917 Bacteria 278139
193 Ga0501039_0107519 3300049575 Bacteria 2179
194 Ga0501040_0065803 3300049576 Bacteria 2497
195 Ga0501041_0037726 3300049577 Bacteria 2929
196 Ga0501067_0006627 3300049583 Bacteria 6424
197 Ga0501073_0031515 3300049589 Bacteria 3782
198 Ga0501075_0054132 3300049591 Bacteria 3018
199 Ga0501076_0016370 3300049592 Bacteria 5623
200 Ga0501079_0032421 3300049741 Bacteria 4017
201 Ga0501080_0003006 3300049742 Bacteria 14866
202 Ga0501081_0085491 3300049743 Bacteria 2214
203 Ga0501083_0000700 3300049744 Bacteria 21809
204 Ga0501045_0014326 3300049824 Bacteria 5619
205 nmdc:mga05p37_1863_c1 3300050507 Bacteria 24556
206 nmdc:mga05p37_95415_c1 3300050507 Bacteria 3664
207 nmdc:mga09592_2682_c1 3300050508 Bacteria 14394
208 nmdc:mga06r32_2745_c1 3300050510 Bacteria 15747
209 nmdc:mga06r32_36883_c1 3300050510 Bacteria 4623
210 nmdc:mga06r32_63190_c1 3300050510 Bacteria 3568
211 nmdc:mga08y16_4_c1 3300050511 Bacteria 916963
212 nmdc:mga0rr50_48_c1 3300050513 Bacteria 67747
213 nmdc:mga0rr50_49136_c1 3300050513 Bacteria 3122
214 nmdc:mga08x19_17639_c1 3300050514 Bacteria 4371
215 Ga0495655_0000035 3300053083 Bacteria 28675
216 Ga0501082_0000081 3300060353 Bacteria 71114
217 Ga0530510_0009670 3300061734 Bacteria 6766
218 nmdc:mga09592_28871_c1
219 Ga0065715_10117936
220 Ga0070658_10007952
221 Ga0070683_100000216
222 Ga0070690_100009927
223 Ga0070670_100000226
224 Ga0070670_100001470
225 Ga0068869_100018921
226 Ga0070666_10002505
227 Ga0070666_10010505
228 Ga0070666_10024971
229 Ga0070666_10044514
230 Ga0070680_100014246
231 Ga0070682_100000001
232 Ga0068868_100000072
233 Ga0068868_100000567
234 Ga0068868_100023672
235 Ga0070660_100085567
236 Ga0070689_100001939
237 Ga0070661_100027112
238 Ga0070692_10000392
239 Ga0070669_100000051
240 Ga0070675_100000002
241 Ga0070674_100054859
242 Ga0070667_100002082
243 Ga0070667_100027711
244 Ga0070709_10000004
245 Ga0070714_100000039
246 Ga0070713_100014366
247 Ga0070701_10000041
248 Ga0070700_100000078
249 Ga0070707_100061607
250 Ga0070699_100030940
251 Ga0070684_100000497
252 Ga0070672_100001366
253 Ga0070672_100005663
254 Ga0070665_100000216
255 Ga0070704_100018053
256 Ga0070664_100002178
257 Ga0070664_100082928
258 Ga0068857_100040940
259 Ga0068854_100006655
260 Ga0068859_100000021
261 Ga0068859_100043377
262 Ga0068864_100000117
263 Ga0068864_100002907
264 Ga0068863_100003103
265 Ga0068863_100164635
266 Ga0068858_100001445
267 Ga0068858_100072686
268 Ga0068862_100003829
269 Ga0070717_10000117
270 Ga0070712_100063691
271 Ga0075428_100013760
272 Ga0075428_100014615
273 Ga0075430_100023840
274 Ga0075431_100002249
275 Ga0075431_100006501
276 Ga0075431_100036763
277 Ga0075429_100022241
278 Ga0075429_100025595
279 Ga0075429_100029799
280 Ga0097620_100000021
281 Ga0097620_100043376
282 Ga0075435_100000082
283 Ga0075435_100058781
284 Ga0105240_10026503
285 Ga0111539_10000053
286 Ga0105245_10000024
287 Ga0105245_10003856
288 Ga0114129_10000576
289 Ga0114129_10039933
290 Ga0105242_10068267
291 Ga0105248_10003333
292 Ga0105238_10000001
293 Ga0105246_10021611
294 Ga0157369_10000654
295 Ga0157374_10000012
296 Ga0157378_10000269
297 Ga0157378_10000600
298 Ga0157378_10068586
299 Ga0157378_10085939
300 Ga0163162_10000740
301 Ga0157372_10078791
302 Ga0157375_10000001
303 Ga0157375_10000008
304 Ga0157375_10000106
305 Ga0157375_10000523
306 Ga0163163_10042329
307 Ga0157377_10000002
308 Ga0157377_10000126
309 Ga0157376_10000020
310 Ga0213873_10000002
311 Ga0213876_10000001
312 Ga0213876_10000173
313 Ga0207680_10002231
314 Ga0207699_10000033
315 Ga0207695_10076550
316 Ga0207660_10026072
317 Ga0207646_10071648
318 Ga0207681_10000043
319 Ga0207694_10000001
320 Ga0207650_10000218
321 Ga0207650_10007462
322 Ga0207650_10019407
323 Ga0207650_10123920
324 Ga0207659_10000005
325 Ga0207687_10000003
326 Ga0207687_10000550
327 Ga0207687_10015701
328 Ga0207664_10001419
329 Ga0207686_10013687
330 Ga0207704_10051955
331 Ga0207691_10006102
332 Ga0207691_10039554
333 Ga0207661_10000044
334 Ga0207651_10004197
335 Ga0207640_10004716
336 Ga0207658_10025693
337 Ga0207658_10124782
338 Ga0207677_10000009
339 Ga0207677_10000090
340 Ga0207677_10027548
341 Ga0207703_10000609
342 Ga0207639_10000003
343 Ga0207708_10000018
344 Ga0207702_10030359
345 Ga0207648_10055163
346 Ga0207676_10000393
347 Ga0207676_10007615
348 Ga0207674_10034750
349 Ga0207428_10000061
350 Ga0268266_10000245
351 Ga0268265_10000290
352 Ga0268264_10002291
353 Ga0265337_1014456
354 Ga0265326_10001108
355 Ga0265326_10008253
356 Ga0265319_1000047
357 Ga0265319_1000112
358 Ga0265319_1025779
359 Ga0265334_10001911
360 Ga0265318_10001786
361 Ga0265323_10000107
362 Ga0265322_10000164
363 Ga0265336_10001411
364 Ga0265338_10001635
365 Ga0265338_10003909
366 Ga0265324_10004559
367 Ga0307511_10000562
368 Ga0265332_10000901
369 Ga0265328_10001074
370 Ga0265320_10001097
371 Ga0265320_10015721
372 Ga0265325_10006944
373 Ga0265329_10000247
374 Ga0265340_10005968
375 Ga0265340_10009155
376 Ga0265339_10000527
377 Ga0265331_10001890
378 Ga0265316_10000869
379 Ga0265316_10013203
380 Ga0265316_10073912
381 Ga0265316_10086108
382 Ga0265313_10004463
383 Ga0265313_10030001
384 Ga0265314_10000357
385 Ga0265342_10000570
386 Ga0265342_10050092
387 Ga0373932_0000690
388 Ga0373961_0001709
389 Ga0373935_0016076
390 Ga0373937_0019633
391 Ga0395901_0001977
392 Ga0436365_0036525
393 Ga0436365_0587160
394 Ga0436365_0774883
395 Ga0436365_0895794
396 Ga0436362_0660519
397 Ga0436362_1152295
398 Ga0451577_0000182
399 Ga0451577_0001342
400 Ga0451577_0091385
401 Ga0453683_0006534
402 Ga0453683_0043722
403 Ga0453684_0000038
404 Ga0453684_0000354
405 Ga0453684_0000949
406 Ga0453684_0001735
407 Ga0453684_0009071
408 Ga0495620_0001860
409 Ga0496114_0000015
410 Ga0501039_0107519
411 Ga0501040_0065803
412 Ga0501041_0037726
413 Ga0501067_0006627
414 Ga0501073_0031515
415 Ga0501075_0054132
416 Ga0501076_0016370
417 Ga0501079_0032421
418 Ga0501080_0003006
419 Ga0501081_0085491
420 Ga0501083_0000700
421 Ga0501045_0014326
422 nmdc:mga05p37_1863_c1
423 nmdc:mga05p37_95415_c1
424 nmdc:mga09592_2682_c1
425 nmdc:mga06r32_2745_c1
426 nmdc:mga06r32_36883_c1
427 nmdc:mga06r32_63190_c1
428 nmdc:mga08y16_4_c1
429 nmdc:mga0rr50_48_c1
430 nmdc:mga0rr50_49136_c1
431 nmdc:mga08x19_17639_c1
432 Ga0495655_0000035
433 Ga0501082_0000081
434 Ga0530510_0009670

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

410

559

0.96

PF00664

ABC_membrane

ABC transporter transmembrane region

34

329

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2awo-assembly2.cif.gz_D crystal structure of the adp-mg-bound e. coli malk (crystallized with adp-mg) 0.8076 340 548
2awn-assembly2.cif.gz_D crystal structure of the adp-mg-bound e. coli malk (crystallized with atp-mg) 0.7608 340 548
6jb3-assembly1.cif.gz_B structure of sur1 subunit bound with repaglinide 0.759 3 332
5yke-assembly1.cif.gz_B structure of pancreatic atp-sensitive potassium channel bound with glibenclamide and atpgammas (focused refinement on tm at 4.11a) 0.7318 4 327
2awn-assembly1.cif.gz_A crystal structure of the adp-mg-bound e. coli malk (crystallized with atp-mg) 0.7063 340 548
ID Description Score Start End Superfamily
af_A0A1D6P1I8_181_285_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9523 338 421 3.40.50.300
af_I1J537_124_443_1.20.1560.10 Mainly Alpha;Up-down Bundle;ABC transporter transmembrane region fold;ABC transporter type 1, transmembrane domain 0.9331 14 328 1.20.1560.10
af_Q9GTN7_1043_1365_1.20.1560.10 Mainly Alpha;Up-down Bundle;ABC transporter transmembrane region fold;ABC transporter type 1, transmembrane domain 0.9329 18 328 1.20.1560.10
af_A0A1D6Q2V7_231_304_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.931 336 405 3.40.50.300
af_P9WQJ1_3_315_1.20.1560.10 Mainly Alpha;Up-down Bundle;ABC transporter transmembrane region fold;ABC transporter type 1, transmembrane domain 0.9287 14 328 1.20.1560.10
ID Description Score Start End GO Terms
AF-A0A3D1EFC6-F1-model_v4 deleted 0.9569 16 325
AF-A0A7C6XX83-F1-model_v4 ABC transporter ATP-binding protein 0.9555 14 299 GO:0005524
GO:0005886
GO:0015421
AF-A0A7C5KSP1-F1-model_v4 ABC transporter ATP-binding protein 0.9487 16 294 GO:0005524
GO:0005886
GO:0015421
AF-A0A3D1EFC6-F1-model_v4 deleted 0.9481 16 325
AF-A0A6N9CNE4-F1-model_v4 deleted 0.9459 15 328

Map