F329353

General Info

Members Datasets Scaffolds Average Seq Length
217 157 434 201

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2849281842|2849282279
Length 212
Sequence ILMAFMLISGVAFAQTEGYKVGDVVKDFSLKNVNNKMVALADYKDAKGYIVVFTCNTCPVAKAYQARISALNAAYAAKGYPVIAINPNDAEAVPDESFQKMQALASEKKFNFPYLLDPDHIVTKQFGATKTPHVFVLNKTDKGNVVEYIGAIDNDPEEANTTKVEYVKNAINELSTGKKPAIASTKAVGCSIKWKKAKYNLATIADEFAYIA

Samples

Sample ID Description Type Environment
1 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
2 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
7 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
24 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
25 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
27 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
28 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
29 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
30 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
31 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
32 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
43 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
44 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
45 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
46 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
49 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
50 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
51 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
53 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
54 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
65 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
66 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
67 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
68 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
69 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
70 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
71 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
72 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
73 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
77 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
81 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
82 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
83 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
84 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
85 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
86 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
89 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
90 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
91 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
92 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
93 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
94 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
95 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
96 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
97 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
98 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
99 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
100 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
101 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
102 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
103 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
104 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
105 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
106 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
107 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
108 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
109 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
110 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
111 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
112 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
113 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
114 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
115 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
116 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
117 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
118 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
119 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
120 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
121 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
122 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
123 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
124 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
125 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
126 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
127 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
128 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
129 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
130 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
131 2739367651 Pedobacter sp. OK291 Isolate Unclassified
132 2739367656 Pedobacter sp. CF523 Isolate Unclassified
133 2739367663 Pedobacter sp. YR510 Isolate Unclassified
134 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
135 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
136 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
137 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
138 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
139 2818991437 Pedobacter terrae 518 Isolate Unclassified
140 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
141 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
142 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
143 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
144 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
145 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
146 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
147 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
148 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
149 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
150 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
151 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
152 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
153 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
154 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
155 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
156 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
157 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.57
Metatranscriptomes 0.92
Isolates 17.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.29
Nodule 2.3
Rhizoplane 0.92
Rhizosphere 71.43
Stem 0
Stem Tuber 0
Unclassified 6.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000056 3300002773 Bacteria 75516
2 JGI25150J39212_1000009 3300002774 Bacteria 249509
3 JGI25151J46595_10000017 3300003187 Bacteria 249509
4 JGI25153J46596_10000023 3300003215 Bacteria 249509
5 rootH1_10173316 3300003316 Bacteria 2096
6 Ga0055536_1000030 3300003781 Bacteria 153926
7 Ga0065714_10014606 3300005288 Bacteria 1990
8 Ga0065714_10064922 3300005288 Bacteria 15411
9 Ga0065714_10072161 3300005288 Bacteria 3419
10 Ga0065714_10149234 3300005288 Bacteria 1106
11 Ga0065714_10238947 3300005288 Bacteria 789
12 Ga0065704_10222542 3300005289 Bacteria 1069
13 Ga0065715_10252178 3300005293 Bacteria 1164
14 Ga0070683_100027988 3300005329 Bacteria 5090
15 Ga0070670_100071540 3300005331 Unclassified 2978
16 Ga0070675_101004097 3300005354 Bacteria 766
17 Ga0070674_100013304 3300005356 Bacteria 5083
18 Ga0070673_100009562 3300005364 Bacteria 6513
19 Ga0070659_100000640 3300005366 Bacteria 25630
20 Ga0070662_100859915 3300005457 Bacteria 773
21 Ga0070685_10031798 3300005466 Bacteria 2951
22 Ga0070684_100090216 3300005535 Bacteria 2725
23 Ga0070672_100051824 3300005543 Bacteria 3202
24 Ga0070664_100039909 3300005564 Bacteria 3958
25 Ga0068852_100655884 3300005616 Bacteria 1057
26 Ga0068864_100437824 3300005618 Bacteria 1248
27 Ga0068851_10047224 3300005834 Bacteria 2180
28 Ga0075362_10236472 3300006177 Bacteria 896
29 Ga0097621_100472667 3300006237 Bacteria 1132
30 Ga0068871_100170711 3300006358 Bacteria 1864
31 Ga0099824_1001974 3300006942 Bacteria 29757
32 Ga0079104_1000052 3300006946 Bacteria 170223
33 Ga0099826_10025544 3300006948 Bacteria 4375
34 Ga0105244_10000022 3300009036 Bacteria 234186
35 Ga0105244_10059002 3300009036 Bacteria 1935
36 Ga0157373_10000010 3300013100 Bacteria 195861
37 Ga0157373_10000273 3300013100 Bacteria 41492
38 Ga0157373_10131245 3300013100 Bacteria 1762
39 Ga0157371_10002697 3300013102 Bacteria 16766
40 Ga0157371_10011915 3300013102 Bacteria 6669
41 Ga0157371_10218358 3300013102 Bacteria 1369
42 Ga0157370_10000029 3300013104 Bacteria 145930
43 Ga0157370_10000106 3300013104 Bacteria 96408
44 Ga0157370_10070845 3300013104 Bacteria 3290
45 Ga0157370_10072661 3300013104 Bacteria 3245
46 Ga0157370_10081490 3300013104 Bacteria 3045
47 Ga0157370_10307951 3300013104 Bacteria 1462
48 Ga0157369_10000002 3300013105 Bacteria 524510
49 Ga0157369_10012439 3300013105 Bacteria 9660
50 Ga0157374_11614990 3300013296 Unclassified 672
51 Ga0157378_10030082 3300013297 Bacteria 4797
52 Ga0157378_11024684 3300013297 Unclassified 860
53 Ga0163162_10715965 3300013306 Bacteria 1122
54 Ga0163162_10761795 3300013306 Unclassified 1087
55 Ga0163162_10931900 3300013306 Unclassified 980
56 Ga0157372_10000428 3300013307 Bacteria 46270
57 Ga0157372_10079685 3300013307 Unclassified 3704
58 Ga0157372_10094932 3300013307 Bacteria 3397
59 Ga0157372_10433602 3300013307 Unclassified 1532
60 Ga0157375_10128451 3300013308 Bacteria 2652
61 Ga0157375_10202025 3300013308 Bacteria 2144
62 Ga0157375_10363817 3300013308 Bacteria 1613
63 Ga0157380_10412533 3300014326 Bacteria 1285
64 Ga0157380_10546119 3300014326 Bacteria 1136
65 Ga0157376_11314942 3300014969 Bacteria 753
66 Ga0182006_1000638 3300015261 Bacteria 24857
67 Ga0182006_1001751 3300015261 Bacteria 12597
68 Ga0182007_10000001 3300015262 Bacteria 1127301
69 Ga0183373_1010 3300015682 Bacteria 196982
70 Ga0163161_10000041 3300017792 Bacteria 136862
71 Ga0163161_10000218 3300017792 Bacteria 52323
72 Ga0163161_10006050 3300017792 Bacteria 8389
73 Ga0163161_10034018 3300017792 Bacteria 3644
74 Ga0163161_10182642 3300017792 Bacteria 1609
75 Ga0163161_10249754 3300017792 Bacteria 1382
76 Ga0206351_10073721 3300020077 Bacteria 1107
77 Ga0206352_10999796 3300020078 Bacteria 851
78 Ga0207425_1000007 3300025245 Bacteria 777411
79 Ga0209026_1000318 3300025250 Bacteria 51578
80 Ga0209129_1000006 3300025258 Bacteria 777761
81 Ga0209676_1000001 3300025292 Bacteria 1852142
82 Ga0209025_1000025 3300025294 Bacteria 524454
83 Ga0209758_1000016 3300025297 Bacteria 778557
84 Ga0209050_1000018 3300025298 Bacteria 723263
85 Ga0207655_1000052 3300025728 Bacteria 291090
86 Ga0207682_10063071 3300025893 Bacteria 1555
87 Ga0207650_10111880 3300025925 Unclassified 2115
88 Ga0207690_10003636 3300025932 Bacteria 9184
89 Ga0207691_10023217 3300025940 Bacteria 5841
90 Ga0207689_10131637 3300025942 Bacteria 2059
91 Ga0207661_10107365 3300025944 Bacteria 2355
92 Ga0207651_10010792 3300025960 Bacteria 5080
93 Ga0207683_10077798 3300026121 Bacteria 2938
94 Ga0209281_1000210 3300027111 Bacteria 132199
95 Ga0209282_1039368 3300027666 Bacteria 2820
96 Ga0307515_10031653 3300028794 Bacteria 8806
97 Ga0307512_10296282 3300030522 Bacteria 758
98 Ga0316177_1191994 3300030731 Unclassified 725
99 Ga0307408_100000733 3300031548 Bacteria 26532
100 Ga0307408_100002342 3300031548 Bacteria 13408
101 Ga0307408_100005092 3300031548 Bacteria 8818
102 Ga0316576_10156680 3300031727 Bacteria 1717
103 Ga0307516_10000648 3300031730 Bacteria 47083
104 Ga0307405_10000046 3300031731 Bacteria 71442
105 Ga0307405_10346408 3300031731 Bacteria 1144
106 Ga0307413_10000107 3300031824 Bacteria 21411
107 Ga0307410_10000130 3300031852 Bacteria 27002
108 Ga0307406_10000003 3300031901 Bacteria 251998
109 Ga0307407_10223099 3300031903 Bacteria 1275
110 Ga0307412_10003147 3300031911 Bacteria 9165
111 Ga0307412_10029063 3300031911 Bacteria 3466
112 Ga0307412_10155882 3300031911 Bacteria 1690
113 Ga0307409_100348324 3300031995 Bacteria 1397
114 Ga0307416_100000195 3300032002 Bacteria 32400
115 Ga0307414_10000001 3300032004 Bacteria 1352954
116 Ga0307414_10031744 3300032004 Bacteria 3469
117 Ga0307414_10095673 3300032004 Bacteria 2220
118 Ga0307414_10214100 3300032004 Bacteria 1577
119 Ga0307414_10347171 3300032004 Bacteria 1272
120 Ga0307414_10585928 3300032004 Bacteria 998
121 Ga0307414_10614403 3300032004 Bacteria 976
122 Ga0307411_10000001 3300032005 Bacteria 931810
123 Ga0307411_10097087 3300032005 Unclassified 2073
124 Ga0307411_10694814 3300032005 Bacteria 885
125 Ga0307510_10122165 3300033180 Bacteria 2305
126 Ga0316584_0428186 3300036712 Unclassified 939
127 Ga0439447_010947 3300041407 Bacteria 2671
128 Ga0451837_1736482 3300041494 Bacteria 713
129 Ga0439462_0026510 3300042015 Unclassified 1528
130 Ga0451577_0133123 3300042876 Bacteria 2231
131 Ga0451577_0307607 3300042876 Bacteria 1436
132 Ga0453683_0000674 3300044673 Bacteria 36279
133 Ga0453683_0001321 3300044673 Bacteria 21805
134 Ga0453683_0010485 3300044673 Bacteria 6138
135 Ga0453683_0231705 3300044673 Bacteria 1175
136 Ga0453683_0403480 3300044673 Bacteria 881
137 Ga0453683_0413051 3300044673 Unclassified 870
138 Ga0466965_0076436 3300044683 Bacteria 1690
139 Ga0453684_0112170 3300044712 Bacteria 3310
140 Ga0453684_0114140 3300044712 Bacteria 3275
141 Ga0453684_0273842 3300044712 Bacteria 1928
142 Ga0453684_0441912 3300044712 Bacteria 1449
143 Ga0453684_1280798 3300044712 Bacteria 766
144 Ga0451576_0001668 3300045051 Bacteria 36838
145 Ga0451576_0077703 3300045051 Bacteria 3454
146 Ga0451576_0414475 3300045051 Bacteria 1413
147 Ga0495664_0194902 3300046477 Bacteria 1228
148 Ga0495610_0000719 3300046512 Bacteria 31465
149 Ga0495610_0055208 3300046512 Bacteria 1915
150 Ga0495610_0191462 3300046512 Bacteria 844
151 Ga0495637_0076789 3300046520 Bacteria 1338
152 Ga0495654_0074067 3300046530 Bacteria 1609
153 Ga0495640_0386938 3300046533 Bacteria 860
154 Ga0495634_0020034 3300046642 Bacteria 4746
155 Ga0495681_0035631 3300047470 Bacteria 2469
156 Ga0496114_0815361 3300048917 Bacteria 812
157 Ga0496115_0012598 3300048918 Bacteria 6370
158 Ga0496116_0000030 3300048919 Bacteria 420761
159 Ga0496117_0057553 3300048920 Bacteria 2699
160 Ga0496118_0062148 3300048921 Bacteria 2760
161 Ga0496121_0086798 3300048924 Bacteria 2458
162 Ga0496124_0011173 3300048927 Bacteria 9004
163 Ga0496125_0000035 3300048928 Bacteria 339737
164 Ga0496126_0006465 3300048929 Bacteria 13057
165 Ga0501223_000733 3300049663 Bacteria 7806
166 Ga0501239_018101 3300049672 Unclassified 844
167 Ga0501249_000004 3300049679 Bacteria 226777
168 Ga0501249_020342 3300049679 Bacteria 1443
169 Ga0501241_020349 3300049758 Bacteria 1221
170 Ga0501241_027024 3300049758 Bacteria 1072
171 Ga0501266_000005 3300049763 Bacteria 346750
172 Ga0501268_044115 3300049765 Bacteria 847
173 Ga0501280_000196 3300049776 Bacteria 15178
174 Ga0500646_0004655 3300053090 Bacteria 3468
175 Ga0500641_0000020 3300053096 Bacteria 119591
176 Ga0500641_0015795 3300053096 Bacteria 2807
177 Ga0500658_0000024 3300053134 Bacteria 117952
178 Ga0500590_115835 3300053148 Bacteria 1264
179 Ga0500584_101655 3300053726 Bacteria 1183
180 2849282279 2849281842 Bacteria 6065644
181 2513233615 2513020052 Bacteria 5120511
182 2520881499 2519899754 Bacteria 5336938
183 2586207606 2585427687 Bacteria 5544917
184 2644008590 2643221600 Bacteria 5530138
185 2644369767 2643221667 Bacteria 5627472
186 2644642967 2643221716 Bacteria 4986332
187 2644682951 2643221725 Bacteria 5087956
188 2738736087 2738541279 Bacteria 6149495
189 2738766859 2738541285 Bacteria 6150075
190 2739217570 2738543007 Bacteria 6149845
191 2739588759 2739367651 Bacteria 6359826
192 2739616047 2739367656 Bacteria 5152243
193 2739645178 2739367663 Bacteria 5040914
194 2740000998 2739367857 Bacteria 5433684
195 2740005814 2739367858 Bacteria 5432813
196 2740032770 2739367866 Bacteria 4215900
197 2802654433 2802428842 Bacteria 4926114
198 2817416767 2816332280 Bacteria 5109718
199 2819548041 2818991437 Bacteria 5805520
200 2842726181 2842722452 Bacteria 6263924
201 2842904378 2842903701 Bacteria 6986368
202 2842910424 2842909656 Bacteria 6185908
203 2857614657 2857613821 Bacteria 4917088
204 2857618262 2857618242 Bacteria 5635925
205 2881363836 2881359912 Bacteria 4935907
206 2902050969 2902048731 Bacteria 4976191
207 2903897375 2903895155 Bacteria 5258610
208 2904419950 2904419702 Bacteria 5166287
209 2904556745 2904555929 Bacteria 5218588
210 2919194965 2919191525 Bacteria 5765973
211 2929153151 2929150217 Bacteria 5462483
212 2946000776 2945997725 Bacteria 6404843
213 2958462235 2958458903 Bacteria 5301041
214 2977270659 2977268062 Bacteria 5243061
215 8054309828 8054307821 Bacteria 5212224
216 8055422250 8055419101 Bacteria 5289643
217 8055596224 8055592153 Bacteria 5961247
218 JGI25152J39213_1000056
219 JGI25150J39212_1000009
220 JGI25151J46595_10000017
221 JGI25153J46596_10000023
222 rootH1_10173316
223 Ga0055536_1000030
224 Ga0065714_10014606
225 Ga0065714_10064922
226 Ga0065714_10072161
227 Ga0065714_10149234
228 Ga0065714_10238947
229 Ga0065704_10222542
230 Ga0065715_10252178
231 Ga0070683_100027988
232 Ga0070670_100071540
233 Ga0070675_101004097
234 Ga0070674_100013304
235 Ga0070673_100009562
236 Ga0070659_100000640
237 Ga0070662_100859915
238 Ga0070685_10031798
239 Ga0070684_100090216
240 Ga0070672_100051824
241 Ga0070664_100039909
242 Ga0068852_100655884
243 Ga0068864_100437824
244 Ga0068851_10047224
245 Ga0075362_10236472
246 Ga0097621_100472667
247 Ga0068871_100170711
248 Ga0099824_1001974
249 Ga0079104_1000052
250 Ga0099826_10025544
251 Ga0105244_10000022
252 Ga0105244_10059002
253 Ga0157373_10000010
254 Ga0157373_10000273
255 Ga0157373_10131245
256 Ga0157371_10002697
257 Ga0157371_10011915
258 Ga0157371_10218358
259 Ga0157370_10000029
260 Ga0157370_10000106
261 Ga0157370_10070845
262 Ga0157370_10072661
263 Ga0157370_10081490
264 Ga0157370_10307951
265 Ga0157369_10000002
266 Ga0157369_10012439
267 Ga0157374_11614990
268 Ga0157378_10030082
269 Ga0157378_11024684
270 Ga0163162_10715965
271 Ga0163162_10761795
272 Ga0163162_10931900
273 Ga0157372_10000428
274 Ga0157372_10079685
275 Ga0157372_10094932
276 Ga0157372_10433602
277 Ga0157375_10128451
278 Ga0157375_10202025
279 Ga0157375_10363817
280 Ga0157380_10412533
281 Ga0157380_10546119
282 Ga0157376_11314942
283 Ga0182006_1000638
284 Ga0182006_1001751
285 Ga0182007_10000001
286 Ga0183373_1010
287 Ga0163161_10000041
288 Ga0163161_10000218
289 Ga0163161_10006050
290 Ga0163161_10034018
291 Ga0163161_10182642
292 Ga0163161_10249754
293 Ga0206351_10073721
294 Ga0206352_10999796
295 Ga0207425_1000007
296 Ga0209026_1000318
297 Ga0209129_1000006
298 Ga0209676_1000001
299 Ga0209025_1000025
300 Ga0209758_1000016
301 Ga0209050_1000018
302 Ga0207655_1000052
303 Ga0207682_10063071
304 Ga0207650_10111880
305 Ga0207690_10003636
306 Ga0207691_10023217
307 Ga0207689_10131637
308 Ga0207661_10107365
309 Ga0207651_10010792
310 Ga0207683_10077798
311 Ga0209281_1000210
312 Ga0209282_1039368
313 Ga0307515_10031653
314 Ga0307512_10296282
315 Ga0316177_1191994
316 Ga0307408_100000733
317 Ga0307408_100002342
318 Ga0307408_100005092
319 Ga0316576_10156680
320 Ga0307516_10000648
321 Ga0307405_10000046
322 Ga0307405_10346408
323 Ga0307413_10000107
324 Ga0307410_10000130
325 Ga0307406_10000003
326 Ga0307407_10223099
327 Ga0307412_10003147
328 Ga0307412_10029063
329 Ga0307412_10155882
330 Ga0307409_100348324
331 Ga0307416_100000195
332 Ga0307414_10000001
333 Ga0307414_10031744
334 Ga0307414_10095673
335 Ga0307414_10214100
336 Ga0307414_10347171
337 Ga0307414_10585928
338 Ga0307414_10614403
339 Ga0307411_10000001
340 Ga0307411_10097087
341 Ga0307411_10694814
342 Ga0307510_10122165
343 Ga0316584_0428186
344 Ga0439447_010947
345 Ga0451837_1736482
346 Ga0439462_0026510
347 Ga0451577_0133123
348 Ga0451577_0307607
349 Ga0453683_0000674
350 Ga0453683_0001321
351 Ga0453683_0010485
352 Ga0453683_0231705
353 Ga0453683_0403480
354 Ga0453683_0413051
355 Ga0466965_0076436
356 Ga0453684_0112170
357 Ga0453684_0114140
358 Ga0453684_0273842
359 Ga0453684_0441912
360 Ga0453684_1280798
361 Ga0451576_0001668
362 Ga0451576_0077703
363 Ga0451576_0414475
364 Ga0495664_0194902
365 Ga0495610_0000719
366 Ga0495610_0055208
367 Ga0495610_0191462
368 Ga0495637_0076789
369 Ga0495654_0074067
370 Ga0495640_0386938
371 Ga0495634_0020034
372 Ga0495681_0035631
373 Ga0496114_0815361
374 Ga0496115_0012598
375 Ga0496116_0000030
376 Ga0496117_0057553
377 Ga0496118_0062148
378 Ga0496121_0086798
379 Ga0496124_0011173
380 Ga0496125_0000035
381 Ga0496126_0006465
382 Ga0501223_000733
383 Ga0501239_018101
384 Ga0501249_000004
385 Ga0501249_020342
386 Ga0501241_020349
387 Ga0501241_027024
388 Ga0501266_000005
389 Ga0501268_044115
390 Ga0501280_000196
391 Ga0500646_0004655
392 Ga0500641_0000020
393 Ga0500641_0015795
394 Ga0500658_0000024
395 Ga0500590_115835
396 Ga0500584_101655
397 2849282279
398 2513233615
399 2520881499
400 2586207606
401 2644008590
402 2644369767
403 2644642967
404 2644682951
405 2738736087
406 2738766859
407 2739217570
408 2739588759
409 2739616047
410 2739645178
411 2740000998
412 2740005814
413 2740032770
414 2802654433
415 2817416767
416 2819548041
417 2842726181
418 2842904378
419 2842910424
420 2857614657
421 2857618262
422 2881363836
423 2902050969
424 2903897375
425 2904419950
426 2904556745
427 2919194965
428 2929153151
429 2946000776
430 2958462235
431 2977270659
432 8054309828
433 8055422250
434 8055596224

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00578

AhpC-TSA

AhpC/TSA family

21

148

0.93

PF08534

Redoxin

Redoxin

20

167

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
2cvb-assembly1.cif.gz_A crystal structure of a thioredoxin-like protein from thermus thermophilus hb8 0.9297 22 199
3u5r-assembly1.cif.gz_E crystal structure of a hypothetical protein smc02350 from sinorhizobium meliloti 1021 0.9161 22 201
2ywi-assembly2.cif.gz_B crystal structure of uncharacterized conserved protein from geobacillus kaustophilus 0.9114 23 202
3u5r-assembly1.cif.gz_E crystal structure of a hypothetical protein smc02350 from sinorhizobium meliloti 1021 0.8875 22 201
5um7-assembly1.cif.gz_A crystal structure of the reduced state of the thiol-disulfide reductase sdba from streptococcus gordonii 0.868 25 153
ID Description Score Start End Superfamily
2ywoA00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.929 22 199 3.40.30.10
af_I1KAL3_50_244_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9125 22 202 3.40.30.10
af_P71990_1_182_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8975 24 199 3.40.30.10
2ywoA00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8573 22 199 3.40.30.10
af_P71990_1_182_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8553 24 199 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A4Q3TR39-F1-model_v4 deleted 0.9952 68 200
AF-A0A4Q3TJT0-F1-model_v4 deleted 0.9871 83 202
AF-A0A3C0BAF9-F1-model_v4 Thioredoxin family protein 0.983 26 199 GO:0016209
GO:0016491
AF-A0A2E8I8U5-F1-model_v4 Thioredoxin family protein 0.9805 15 197 GO:0016209
GO:0016491
AF-A0A345HBK6-F1-model_v4 Thioredoxin family protein 0.9796 22 201 GO:0016209
GO:0016491

Map