F329482
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 218 | 174 | 436 | 740 |
Family's Representative Sequence
| Representative Sequence | 3300003841|Ga0055541_1003100|Ga0055541_10031002 |
| Length | 779 |
| Sequence | MRGGAENELESWYNRNSSDFNEIERMSCMSESNQEYIVISGARENNLKNVSLRIPKRKITIFTGVSGSGKSSIVFDTIAAESTRLLNENFSMFVRNFLPRYPQPDTDAIENLSMAVIVDQKRLGGGSHSTMGTITDISPILRLFFSRVGQPYVGPAHMFSFNDPQGMCLECSGIGRKLDIEMSKALDMSKSLNEGAILLPDYAVNSMDWSIIMQSGSFDPDQKLSDYSEEELDFLLYSKARKVEMQFGGKAINITVEGVIEKFTNKYIKRDVKTMSERTQRAVAPFISEGPCSSCRGARLSQAALNSRINGLNIADMSSMEVGRLIRVIHEVDAANARPVIKSLTERLQHLVDIGLDYLTLDRETDTLSGGESQRVKMVKHLSGSLVDVTYIFDEPSVGLHPRDVHRLNGLLQKLRDKGNTVIVVEHDPDVIKVADHIVDVGPHAGSHGGTIVYEGSFQGLLTSGTRTGTHMKRPLQLKQATRQPSGKLSIQQATLHNLQNVSVDIPSGVLTVVTGVAGSGKSTLINEVFLSEHPDAIVIDQSAVGVSTRSNPATYTGIMDDVRKAFASANKVNQGLFSFNSKGACENCQGLGVVYTDLAFLESVKLPCEVCGGKRFKEEVLAYTFNGKNIAEVLEMTVEQALAFFELKEVVRKLQAMSDVGLNYITLGQPLSTLSGGECQRIKLASELHKNGSIYVMDEPTTGLHMSDIGHLLEIMNRLVDAGNTVIVIEHNLDVISQADWIIDMGPDGGSSGGQVMFEGTPLQIIHARQSITGSYLK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003841 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 2 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 3 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 4 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 5 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 6 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 7 | 3300003751 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 | Metagenome | Endosphere |
| 8 | 3300003758 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 | Metagenome | Endosphere |
| 9 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 10 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 11 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 12 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 14 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 15 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 21 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 22 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 26 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 27 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 28 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 29 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 30 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 31 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 32 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 33 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 34 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 35 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 36 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 37 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 38 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 39 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 40 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300021377 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 | Metagenome | Unclassified |
| 56 | 3300025224 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025225 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300028016 | Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 | Metagenome | Rhizosphere |
| 79 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 80 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 81 | 3300030742 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 | Metagenome | Rhizosphere |
| 82 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 83 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 84 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 85 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 86 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 87 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 88 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 89 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 90 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 91 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 92 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 93 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 94 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 95 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 96 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 97 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 98 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 99 | 3300042016 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 | Metagenome | Rhizosphere |
| 100 | 3300042439 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 | Metagenome | Rhizosphere |
| 101 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 102 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 103 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 104 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 105 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 106 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 107 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 108 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 113 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 114 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 115 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 116 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 117 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 121 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 123 | 3300049758 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought | Metagenome | Rhizosphere |
| 124 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300050005 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought | Metagenome | Rhizosphere |
| 126 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 127 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 128 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 129 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 130 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 131 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 132 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 133 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 134 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 135 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 136 | 2510917027 | Brevibacillus sp. CF112 | Isolate | Rhizosphere |
| 137 | 2512564013 | Brevibacillus sp. BC25 | Isolate | Rhizosphere |
| 138 | 2512564039 | Paenibacillus mucilaginosus 3016 | Isolate | Rhizosphere |
| 139 | 2524023129 | Paenibacillus pinihumi DSM 23905 | Isolate | Rhizosphere |
| 140 | 2548877040 | Paenibacillus sonchi X19-5 | Isolate | Rhizosphere |
| 141 | 2593339198 | Paenibacillus sp. UNCCL117 | Isolate | Unclassified |
| 142 | 2619619294 | Paenibacillus durus ATCC 35681 | Isolate | Unclassified |
| 143 | 2671180531 | Gemmata sp. SH-PL17 | Isolate | Unclassified |
| 144 | 2671180694 | Paenibacillus sp. A3 | Isolate | Unclassified |
| 145 | 2738541278 | Niastella sp. CF465 | Isolate | Unclassified |
| 146 | 2738541295 | Bacillus sp. OK085 | Isolate | Unclassified |
| 147 | 2791355222 | Paenibacillus oryzae 1DrF-4 | Isolate | Unclassified |
| 148 | 2816332139 | Pseudonocardia kunmingensis DSM 45301 | Isolate | Unclassified |
| 149 | 2821111986 | Paenibacillus illinoisensis 582 | Isolate | Unclassified |
| 150 | 2857460504 | Brevibacillus sp. R-74223 | Isolate | Unclassified |
| 151 | 2857465823 | Brevibacillus sp. R-74266 | Isolate | Unclassified |
| 152 | 2857472729 | Cohnella sp. R-74144 | Isolate | Unclassified |
| 153 | 2865002811 | Paenibacillus sp. R-74131 | Isolate | Unclassified |
| 154 | 2881636855 | Paenibacillus sp. 7197 | Isolate | Rhizosphere |
| 155 | 2884791551 | Chitinophaga oryzae 1310 | Isolate | Unclassified |
| 156 | 2888578766 | Paenibacillus lycopersici 12200R-189 | Isolate | Rhizosphere |
| 157 | 2889049205 | Paenibacillus rhizovicinus 14171R-81 | Isolate | Rhizosphere |
| 158 | 2896085136 | Chitinophaga alhagiae T22 | Isolate | Unclassified |
| 159 | 2904755435 | Paenibacillus aceris KACC 19194 | Isolate | Rhizosphere |
| 160 | 2907202186 | Paenibacillus sp. HJL G12 | Isolate | Unclassified |
| 161 | 2915597211 | Brevibacillus brevis Ag35 | Isolate | Nodule |
| 162 | 2915606848 | Brevibacillus sp. HD1.4A | Isolate | Rhizosphere |
| 163 | 2919425241 | Bacillus sp. 3255 | Isolate | Rhizosphere |
| 164 | 2929183550 | Brevibacillus sp. R-71971 Hybrid assembly | Isolate | Unclassified |
| 165 | 2929206907 | Paenibacillus sp. R-74146 Hybrid assembly | Isolate | Unclassified |
| 166 | 2971403814 | Paenibacillus tritici LMG 29502 | Isolate | Unclassified |
| 167 | 2980182181 | Paenibacillus cymbidii R196 | Isolate | Unclassified |
| 168 | 3001892409 | Neobacillus rhizophilus FJAT-49825 | Isolate | Rhizosphere |
| 169 | 8002317523 | Cohnella sp. GbtcB17 | Isolate | Unclassified |
| 170 | 8054465665 | Paenibacillus sonchi IIRRBNF1 | Isolate | Rhizosphere |
| 171 | 8054795415 | Paenibacillus periandrae PM10 | Isolate | Nodule |
| 172 | 8055632911 | Paenibacillus radicibacter N1-5-1-14 | Isolate | Unclassified |
| 173 | 8057473075 | Paenibacillus endoradicis T3-5-0-4 | Isolate | Unclassified |
| 174 | 8057977335 | Paenibacillus oenotherae DT7-4 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 82.11 |
| Metatranscriptomes | 0 |
| Isolates | 17.89 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 10.55 |
| Nodule | 0.92 |
| Rhizoplane | 0.46 |
| Rhizosphere | 69.72 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.29 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0055541_1003100 | 3300003841 | Bacteria | 3184 |
| 2 | JGI24740J21852_10009362 | 3300001979 | Unclassified | 3841 |
| 3 | JGI24739J22299_10002128 | 3300001989 | Bacteria | 7584 |
| 4 | JGI24735J21928_10000377 | 3300002067 | Bacteria | 15618 |
| 5 | rootL2_10049627 | 3300003322 | Bacteria | 4951 |
| 6 | rootL2_10059650 | 3300003322 | Bacteria | 7404 |
| 7 | rootH1_10052429 | 3300003323 | Bacteria | 26945 |
| 8 | Ga0055538_1000948 | 3300003751 | Bacteria | 6930 |
| 9 | Ga0055532_1001434 | 3300003758 | Bacteria | 6649 |
| 10 | Ga0055531_10000198 | 3300003794 | Bacteria | 66737 |
| 11 | Ga0055531_10000362 | 3300003794 | Bacteria | 43910 |
| 12 | Ga0065165_1000406 | 3300005262 | Bacteria | 69083 |
| 13 | Ga0065704_10074188 | 3300005289 | Bacteria | 6462 |
| 14 | Ga0070658_10000035 | 3300005327 | Bacteria | 145828 |
| 15 | Ga0070680_100012601 | 3300005336 | Bacteria | 6574 |
| 16 | Ga0070687_100018637 | 3300005343 | Bacteria | 3215 |
| 17 | Ga0070674_100044884 | 3300005356 | Bacteria | 3017 |
| 18 | Ga0070659_100012570 | 3300005366 | Bacteria | 6276 |
| 19 | Ga0070711_100017639 | 3300005439 | Bacteria | 4548 |
| 20 | Ga0070708_100053776 | 3300005445 | Bacteria | 3574 |
| 21 | Ga0070706_100003555 | 3300005467 | Bacteria | 15329 |
| 22 | Ga0070706_100050071 | 3300005467 | Bacteria | 3855 |
| 23 | Ga0070707_100054272 | 3300005468 | Bacteria | 3842 |
| 24 | Ga0070707_100085161 | 3300005468 | Bacteria | 3055 |
| 25 | Ga0070698_100013812 | 3300005471 | Bacteria | 8543 |
| 26 | Ga0070698_100061787 | 3300005471 | Bacteria | 3780 |
| 27 | Ga0070699_100013458 | 3300005518 | Bacteria | 7045 |
| 28 | Ga0070699_100030881 | 3300005518 | Bacteria | 4626 |
| 29 | Ga0070696_100022104 | 3300005546 | Bacteria | 4319 |
| 30 | Ga0070664_100001649 | 3300005564 | Bacteria | 17871 |
| 31 | Ga0068857_100000018 | 3300005577 | Bacteria | 93371 |
| 32 | Ga0068856_100000018 | 3300005614 | Bacteria | 151165 |
| 33 | Ga0068856_100000151 | 3300005614 | Bacteria | 70749 |
| 34 | Ga0068852_100000045 | 3300005616 | Bacteria | 88494 |
| 35 | Ga0068866_10003024 | 3300005718 | Bacteria | 6944 |
| 36 | Ga0068861_100027389 | 3300005719 | Bacteria | 4150 |
| 37 | Ga0081455_10030240 | 3300005937 | Bacteria | 4923 |
| 38 | Ga0081539_10006584 | 3300005985 | Bacteria | 11050 |
| 39 | Ga0081539_10012525 | 3300005985 | Bacteria | 6521 |
| 40 | Ga0081539_10022328 | 3300005985 | Bacteria | 4192 |
| 41 | Ga0081539_10029844 | 3300005985 | Bacteria | 3398 |
| 42 | Ga0075365_10001193 | 3300006038 | Bacteria | 11442 |
| 43 | Ga0075364_10034635 | 3300006051 | Unclassified | 3259 |
| 44 | Ga0070712_100019146 | 3300006175 | Bacteria | 4459 |
| 45 | Ga0075428_100061034 | 3300006844 | Bacteria | 4128 |
| 46 | Ga0075431_100115643 | 3300006847 | Bacteria | 2769 |
| 47 | Ga0075429_100006781 | 3300006880 | Bacteria | 9933 |
| 48 | Ga0075429_100013679 | 3300006880 | Bacteria | 7037 |
| 49 | Ga0075429_100046991 | 3300006880 | Bacteria | 3755 |
| 50 | Ga0068865_100006331 | 3300006881 | Bacteria | 7212 |
| 51 | Ga0099794_10018974 | 3300007265 | Bacteria | 3091 |
| 52 | Ga0105240_10000009 | 3300009093 | Bacteria | 591332 |
| 53 | Ga0111539_10091582 | 3300009094 | Bacteria | 3573 |
| 54 | Ga0114129_10020172 | 3300009147 | Bacteria | 9486 |
| 55 | Ga0114129_10040400 | 3300009147 | Bacteria | 6576 |
| 56 | Ga0114129_10049458 | 3300009147 | Bacteria | 5906 |
| 57 | Ga0114129_10063808 | 3300009147 | Bacteria | 5141 |
| 58 | Ga0105241_10040603 | 3300009174 | Unclassified | 3513 |
| 59 | Ga0105237_10000049 | 3300009545 | Bacteria | 162066 |
| 60 | Ga0105238_10008800 | 3300009551 | Bacteria | 10099 |
| 61 | Ga0105239_10002235 | 3300010375 | Bacteria | 24786 |
| 62 | Ga0105239_10009847 | 3300010375 | Bacteria | 10737 |
| 63 | Ga0105246_10005986 | 3300011119 | Bacteria | 7426 |
| 64 | Ga0105246_10006253 | 3300011119 | Bacteria | 7269 |
| 65 | Ga0157373_10013026 | 3300013100 | Bacteria | 6103 |
| 66 | Ga0157371_10067151 | 3300013102 | Unclassified | 2538 |
| 67 | Ga0157370_10000574 | 3300013104 | Bacteria | 45896 |
| 68 | Ga0157370_10021604 | 3300013104 | Bacteria | 6412 |
| 69 | Ga0157369_10000271 | 3300013105 | Bacteria | 69705 |
| 70 | Ga0157369_10000864 | 3300013105 | Bacteria | 38646 |
| 71 | Ga0163163_10044887 | 3300014325 | Unclassified | 4336 |
| 72 | Ga0157377_10001105 | 3300014745 | Bacteria | 11406 |
| 73 | Ga0157376_10000035 | 3300014969 | Bacteria | 151993 |
| 74 | Ga0213874_10000708 | 3300021377 | Bacteria | 6740 |
| 75 | Ga0209784_100634 | 3300025224 | Bacteria | 10850 |
| 76 | Ga0209566_100210 | 3300025225 | Bacteria | 59477 |
| 77 | Ga0209566_100336 | 3300025225 | Bacteria | 41560 |
| 78 | Ga0209147_100086 | 3300025229 | Bacteria | 182078 |
| 79 | Ga0209025_1016654 | 3300025294 | Bacteria | 4312 |
| 80 | Ga0209257_1000006 | 3300025304 | Bacteria | 1570111 |
| 81 | Ga0209257_1000008 | 3300025304 | Bacteria | 1294570 |
| 82 | Ga0207647_10003335 | 3300025904 | Bacteria | 12056 |
| 83 | Ga0207705_10000010 | 3300025909 | Bacteria | 518023 |
| 84 | Ga0207684_10006202 | 3300025910 | Bacteria | 10915 |
| 85 | Ga0207684_10032152 | 3300025910 | Bacteria | 4462 |
| 86 | Ga0207695_10000038 | 3300025913 | Bacteria | 475092 |
| 87 | Ga0207671_10000004 | 3300025914 | Bacteria | 1022356 |
| 88 | Ga0207671_10063814 | 3300025914 | Bacteria | 2737 |
| 89 | Ga0207693_10055168 | 3300025915 | Bacteria | 3118 |
| 90 | Ga0207663_10014819 | 3300025916 | Bacteria | 4283 |
| 91 | Ga0207660_10023992 | 3300025917 | Bacteria | 4125 |
| 92 | Ga0207657_10041304 | 3300025919 | Bacteria | 4079 |
| 93 | Ga0207646_10009145 | 3300025922 | Bacteria | 9832 |
| 94 | Ga0207704_10006875 | 3300025938 | Bacteria | 5337 |
| 95 | Ga0207679_10001035 | 3300025945 | Bacteria | 17767 |
| 96 | Ga0207667_10014997 | 3300025949 | Bacteria | 8814 |
| 97 | Ga0207702_10000100 | 3300026078 | Bacteria | 99927 |
| 98 | Ga0207702_10000112 | 3300026078 | Bacteria | 94838 |
| 99 | Ga0207674_10000215 | 3300026116 | Bacteria | 71809 |
| 100 | Ga0207675_100013199 | 3300026118 | Bacteria | 7710 |
| 101 | Ga0207675_100067642 | 3300026118 | Bacteria | 3339 |
| 102 | Ga0207698_10000197 | 3300026142 | Bacteria | 37794 |
| 103 | Ga0265354_1000056 | 3300028016 | Bacteria | 18570 |
| 104 | Ga0307517_10042088 | 3300028786 | Bacteria | 4912 |
| 105 | Ga0307515_10000019 | 3300028794 | Bacteria | 422262 |
| 106 | Ga0316183_1114883 | 3300030742 | Bacteria | 48072 |
| 107 | Ga0265316_10024196 | 3300031344 | Bacteria | 5094 |
| 108 | Ga0307513_10002872 | 3300031456 | Bacteria | 23596 |
| 109 | Ga0307513_10065755 | 3300031456 | Bacteria | 3814 |
| 110 | Ga0265314_10031389 | 3300031711 | Bacteria | 3922 |
| 111 | Ga0265342_10002317 | 3300031712 | Bacteria | 16557 |
| 112 | Ga0316578_10012952 | 3300031728 | Bacteria | 4408 |
| 113 | Ga0307516_10000021 | 3300031730 | Bacteria | 192678 |
| 114 | Ga0307406_10000002 | 3300031901 | Bacteria | 255753 |
| 115 | Ga0307406_10041214 | 3300031901 | Bacteria | 2876 |
| 116 | Ga0307416_100019129 | 3300032002 | Bacteria | 4848 |
| 117 | Ga0316574_0024358 | 3300035398 | Bacteria | 3621 |
| 118 | Ga0316584_0018081 | 3300036712 | Bacteria | 5082 |
| 119 | Ga0316584_0022619 | 3300036712 | Bacteria | 4587 |
| 120 | Ga0395900_0000001 | 3300037418 | Bacteria | 931146 |
| 121 | Ga0395900_0073052 | 3300037418 | Bacteria | 3526 |
| 122 | Ga0395898_0000002 | 3300037466 | Bacteria | 931013 |
| 123 | Ga0436364_0521311 | 3300037853 | Bacteria | 3712 |
| 124 | Ga0395901_0000072 | 3300038443 | Bacteria | 140394 |
| 125 | Ga0436363_0775270 | 3300039450 | Bacteria | 16759 |
| 126 | Ga0439431_0001178 | 3300041997 | Bacteria | 5716 |
| 127 | Ga0439445_0000569 | 3300042004 | Bacteria | 7558 |
| 128 | Ga0439463_001487 | 3300042016 | Bacteria | 6192 |
| 129 | Ga0439464_0000459 | 3300042439 | Bacteria | 8159 |
| 130 | Ga0466969_0008093 | 3300044656 | Bacteria | 5583 |
| 131 | Ga0466972_0000180 | 3300044658 | Bacteria | 48646 |
| 132 | Ga0453683_0001235 | 3300044673 | Bacteria | 22899 |
| 133 | Ga0453683_0014799 | 3300044673 | Bacteria | 5063 |
| 134 | Ga0453684_0006052 | 3300044712 | Bacteria | 23377 |
| 135 | Ga0453684_0016755 | 3300044712 | Bacteria | 11418 |
| 136 | Ga0453684_0027052 | 3300044712 | Bacteria | 8246 |
| 137 | Ga0453684_0055181 | 3300044712 | Bacteria | 5167 |
| 138 | Ga0453684_0075278 | 3300044712 | Bacteria | 4244 |
| 139 | Ga0453684_0104962 | 3300044712 | Bacteria | 3448 |
| 140 | Ga0466970_0033325 | 3300044765 | Bacteria | 2723 |
| 141 | Ga0466959_0051584 | 3300045049 | Bacteria | 3016 |
| 142 | Ga0451576_0000736 | 3300045051 | Bacteria | 65519 |
| 143 | Ga0451576_0001483 | 3300045051 | Bacteria | 39693 |
| 144 | Ga0451576_0005983 | 3300045051 | Bacteria | 15042 |
| 145 | Ga0451576_0116478 | 3300045051 | Bacteria | 2782 |
| 146 | Ga0495627_000555 | 3300046453 | Bacteria | 30748 |
| 147 | Ga0495643_0000104 | 3300046522 | Bacteria | 140570 |
| 148 | Ga0495633_0000022 | 3300046558 | Bacteria | 226582 |
| 149 | Ga0495672_0003213 | 3300047320 | Bacteria | 14208 |
| 150 | Ga0496105_0041203 | 3300048908 | Bacteria | 3806 |
| 151 | Ga0496122_0017967 | 3300048925 | Bacteria | 6562 |
| 152 | Ga0496122_0031906 | 3300048925 | Bacteria | 4370 |
| 153 | Ga0496123_0009392 | 3300048926 | Bacteria | 8813 |
| 154 | Ga0496124_0000793 | 3300048927 | Bacteria | 51468 |
| 155 | Ga0496125_0001006 | 3300048928 | Bacteria | 43901 |
| 156 | Ga0501037_0016518 | 3300049573 | Bacteria | 5433 |
| 157 | Ga0501047_0062842 | 3300049581 | Bacteria | 3582 |
| 158 | Ga0501048_0047772 | 3300049582 | Bacteria | 3054 |
| 159 | Ga0501075_0089450 | 3300049591 | Bacteria | 2335 |
| 160 | Ga0501076_0054537 | 3300049592 | Bacteria | 3168 |
| 161 | Ga0501225_0000573 | 3300049705 | Bacteria | 11524 |
| 162 | Ga0501241_000704 | 3300049758 | Bacteria | 7208 |
| 163 | Ga0501044_0004493 | 3300049823 | Bacteria | 15599 |
| 164 | Ga0501284_00040 | 3300050005 | Bacteria | 51651 |
| 165 | nmdc:mga0yw44_178_c1 | 3300050492 | Bacteria | 22323 |
| 166 | nmdc:mga06z11_18424_c2 | 3300050494 | Bacteria | 2136 |
| 167 | nmdc:mga05p37_11686_c1 | 3300050507 | Bacteria | 10463 |
| 168 | nmdc:mga05p37_32521_c1 | 3300050507 | Bacteria | 6380 |
| 169 | nmdc:mga05p37_46227_c1 | 3300050507 | Bacteria | 5353 |
| 170 | nmdc:mga09592_25642_c1 | 3300050508 | Bacteria | 4882 |
| 171 | nmdc:mga08y16_103554_c1 | 3300050511 | Bacteria | 2963 |
| 172 | nmdc:mga08y16_14311_c1 | 3300050511 | Bacteria | 8350 |
| 173 | Ga0500643_011463 | 3300053087 | Bacteria | 3234 |
| 174 | Ga0500568_0012419 | 3300053139 | Bacteria | 3920 |
| 175 | Ga0500577_0000984 | 3300053142 | Bacteria | 7346 |
| 176 | Ga0500622_0000004 | 3300053156 | Bacteria | 557587 |
| 177 | Ga0500622_0000005 | 3300053156 | Bacteria | 502443 |
| 178 | Ga0500622_0000595 | 3300053156 | Bacteria | 32894 |
| 179 | Ga0501084_0001901 | 3300054114 | Bacteria | 16665 |
| 180 | 2511180630 | 2510917027 | Bacteria | 5287437 |
| 181 | 2512638068 | 2512564013 | Bacteria | 6286191 |
| 182 | 2512731728 | 2512564039 | Bacteria | 8739048 |
| 183 | 2524189454 | 2524023129 | Bacteria | 6762600 |
| 184 | 2550902417 | 2548877040 | Bacteria | 7507281 |
| 185 | 2595316933 | 2593339198 | Bacteria | 7267884 |
| 186 | 2621275333 | 2619619294 | Bacteria | 5575484 |
| 187 | 2673166578 | 2671180531 | Bacteria | 9045424 |
| 188 | 2673821410 | 2671180694 | Bacteria | 7506943 |
| 189 | 2738724935 | 2738541278 | Bacteria | 9755573 |
| 190 | 2738817012 | 2738541295 | Bacteria | 5730091 |
| 191 | 2793182161 | 2791355222 | Bacteria | 5898266 |
| 192 | 2816510207 | 2816332139 | Bacteria | 9138787 |
| 193 | 2821112893 | 2821111986 | Bacteria | 6894338 |
| 194 | 2857465386 | 2857460504 | Bacteria | 5194327 |
| 195 | 2857467495 | 2857465823 | Bacteria | 6772595 |
| 196 | 2857476869 | 2857472729 | Bacteria | 6568124 |
| 197 | 2865008701 | 2865002811 | Bacteria | 6333767 |
| 198 | 2881637647 | 2881636855 | Bacteria | 5205297 |
| 199 | 2884793065 | 2884791551 | Bacteria | 8511252 |
| 200 | 2888581642 | 2888578766 | Bacteria | 6743310 |
| 201 | 2889049713 | 2889049205 | Bacteria | 7524325 |
| 202 | 2896089929 | 2896085136 | Bacteria | 6129793 |
| 203 | 2904757931 | 2904755435 | Bacteria | 7986759 |
| 204 | 2907202924 | 2907202186 | Bacteria | 6632024 |
| 205 | 2915601487 | 2915597211 | Bacteria | 6475886 |
| 206 | 2915607759 | 2915606848 | Bacteria | 6032732 |
| 207 | 2919426262 | 2919425241 | Bacteria | 8055701 |
| 208 | 2929186671 | 2929183550 | Bacteria | 6377511 |
| 209 | 2929209683 | 2929206907 | Bacteria | 5918291 |
| 210 | 2971406231 | 2971403814 | Bacteria | 7370929 |
| 211 | 2980183867 | 2980182181 | Bacteria | 9454109 |
| 212 | 3001895549 | 3001892409 | Bacteria | 6328293 |
| 213 | 8002318677 | 8002317523 | Bacteria | 8051857 |
| 214 | 8054468643 | 8054465665 | Bacteria | 7323556 |
| 215 | 8054800592 | 8054795415 | Bacteria | 9785225 |
| 216 | 8055637675 | 8055632911 | Bacteria | 5283357 |
| 217 | 8057474306 | 8057473075 | Bacteria | 5892720 |
| 218 | 8057981761 | 8057977335 | Bacteria | 5694872 |
| 219 | Ga0055541_1003100 | |||
| 220 | JGI24740J21852_10009362 | |||
| 221 | JGI24739J22299_10002128 | |||
| 222 | JGI24735J21928_10000377 | |||
| 223 | rootL2_10049627 | |||
| 224 | rootL2_10059650 | |||
| 225 | rootH1_10052429 | |||
| 226 | Ga0055538_1000948 | |||
| 227 | Ga0055532_1001434 | |||
| 228 | Ga0055531_10000198 | |||
| 229 | Ga0055531_10000362 | |||
| 230 | Ga0065165_1000406 | |||
| 231 | Ga0065704_10074188 | |||
| 232 | Ga0070658_10000035 | |||
| 233 | Ga0070680_100012601 | |||
| 234 | Ga0070687_100018637 | |||
| 235 | Ga0070674_100044884 | |||
| 236 | Ga0070659_100012570 | |||
| 237 | Ga0070711_100017639 | |||
| 238 | Ga0070708_100053776 | |||
| 239 | Ga0070706_100003555 | |||
| 240 | Ga0070706_100050071 | |||
| 241 | Ga0070707_100054272 | |||
| 242 | Ga0070707_100085161 | |||
| 243 | Ga0070698_100013812 | |||
| 244 | Ga0070698_100061787 | |||
| 245 | Ga0070699_100013458 | |||
| 246 | Ga0070699_100030881 | |||
| 247 | Ga0070696_100022104 | |||
| 248 | Ga0070664_100001649 | |||
| 249 | Ga0068857_100000018 | |||
| 250 | Ga0068856_100000018 | |||
| 251 | Ga0068856_100000151 | |||
| 252 | Ga0068852_100000045 | |||
| 253 | Ga0068866_10003024 | |||
| 254 | Ga0068861_100027389 | |||
| 255 | Ga0081455_10030240 | |||
| 256 | Ga0081539_10006584 | |||
| 257 | Ga0081539_10012525 | |||
| 258 | Ga0081539_10022328 | |||
| 259 | Ga0081539_10029844 | |||
| 260 | Ga0075365_10001193 | |||
| 261 | Ga0075364_10034635 | |||
| 262 | Ga0070712_100019146 | |||
| 263 | Ga0075428_100061034 | |||
| 264 | Ga0075431_100115643 | |||
| 265 | Ga0075429_100006781 | |||
| 266 | Ga0075429_100013679 | |||
| 267 | Ga0075429_100046991 | |||
| 268 | Ga0068865_100006331 | |||
| 269 | Ga0099794_10018974 | |||
| 270 | Ga0105240_10000009 | |||
| 271 | Ga0111539_10091582 | |||
| 272 | Ga0114129_10020172 | |||
| 273 | Ga0114129_10040400 | |||
| 274 | Ga0114129_10049458 | |||
| 275 | Ga0114129_10063808 | |||
| 276 | Ga0105241_10040603 | |||
| 277 | Ga0105237_10000049 | |||
| 278 | Ga0105238_10008800 | |||
| 279 | Ga0105239_10002235 | |||
| 280 | Ga0105239_10009847 | |||
| 281 | Ga0105246_10005986 | |||
| 282 | Ga0105246_10006253 | |||
| 283 | Ga0157373_10013026 | |||
| 284 | Ga0157371_10067151 | |||
| 285 | Ga0157370_10000574 | |||
| 286 | Ga0157370_10021604 | |||
| 287 | Ga0157369_10000271 | |||
| 288 | Ga0157369_10000864 | |||
| 289 | Ga0163163_10044887 | |||
| 290 | Ga0157377_10001105 | |||
| 291 | Ga0157376_10000035 | |||
| 292 | Ga0213874_10000708 | |||
| 293 | Ga0209784_100634 | |||
| 294 | Ga0209566_100210 | |||
| 295 | Ga0209566_100336 | |||
| 296 | Ga0209147_100086 | |||
| 297 | Ga0209025_1016654 | |||
| 298 | Ga0209257_1000006 | |||
| 299 | Ga0209257_1000008 | |||
| 300 | Ga0207647_10003335 | |||
| 301 | Ga0207705_10000010 | |||
| 302 | Ga0207684_10006202 | |||
| 303 | Ga0207684_10032152 | |||
| 304 | Ga0207695_10000038 | |||
| 305 | Ga0207671_10000004 | |||
| 306 | Ga0207671_10063814 | |||
| 307 | Ga0207693_10055168 | |||
| 308 | Ga0207663_10014819 | |||
| 309 | Ga0207660_10023992 | |||
| 310 | Ga0207657_10041304 | |||
| 311 | Ga0207646_10009145 | |||
| 312 | Ga0207704_10006875 | |||
| 313 | Ga0207679_10001035 | |||
| 314 | Ga0207667_10014997 | |||
| 315 | Ga0207702_10000100 | |||
| 316 | Ga0207702_10000112 | |||
| 317 | Ga0207674_10000215 | |||
| 318 | Ga0207675_100013199 | |||
| 319 | Ga0207675_100067642 | |||
| 320 | Ga0207698_10000197 | |||
| 321 | Ga0265354_1000056 | |||
| 322 | Ga0307517_10042088 | |||
| 323 | Ga0307515_10000019 | |||
| 324 | Ga0316183_1114883 | |||
| 325 | Ga0265316_10024196 | |||
| 326 | Ga0307513_10002872 | |||
| 327 | Ga0307513_10065755 | |||
| 328 | Ga0265314_10031389 | |||
| 329 | Ga0265342_10002317 | |||
| 330 | Ga0316578_10012952 | |||
| 331 | Ga0307516_10000021 | |||
| 332 | Ga0307406_10000002 | |||
| 333 | Ga0307406_10041214 | |||
| 334 | Ga0307416_100019129 | |||
| 335 | Ga0316574_0024358 | |||
| 336 | Ga0316584_0018081 | |||
| 337 | Ga0316584_0022619 | |||
| 338 | Ga0395900_0000001 | |||
| 339 | Ga0395900_0073052 | |||
| 340 | Ga0395898_0000002 | |||
| 341 | Ga0436364_0521311 | |||
| 342 | Ga0395901_0000072 | |||
| 343 | Ga0436363_0775270 | |||
| 344 | Ga0439431_0001178 | |||
| 345 | Ga0439445_0000569 | |||
| 346 | Ga0439463_001487 | |||
| 347 | Ga0439464_0000459 | |||
| 348 | Ga0466969_0008093 | |||
| 349 | Ga0466972_0000180 | |||
| 350 | Ga0453683_0001235 | |||
| 351 | Ga0453683_0014799 | |||
| 352 | Ga0453684_0006052 | |||
| 353 | Ga0453684_0016755 | |||
| 354 | Ga0453684_0027052 | |||
| 355 | Ga0453684_0055181 | |||
| 356 | Ga0453684_0075278 | |||
| 357 | Ga0453684_0104962 | |||
| 358 | Ga0466970_0033325 | |||
| 359 | Ga0466959_0051584 | |||
| 360 | Ga0451576_0000736 | |||
| 361 | Ga0451576_0001483 | |||
| 362 | Ga0451576_0005983 | |||
| 363 | Ga0451576_0116478 | |||
| 364 | Ga0495627_000555 | |||
| 365 | Ga0495643_0000104 | |||
| 366 | Ga0495633_0000022 | |||
| 367 | Ga0495672_0003213 | |||
| 368 | Ga0496105_0041203 | |||
| 369 | Ga0496122_0017967 | |||
| 370 | Ga0496122_0031906 | |||
| 371 | Ga0496123_0009392 | |||
| 372 | Ga0496124_0000793 | |||
| 373 | Ga0496125_0001006 | |||
| 374 | Ga0501037_0016518 | |||
| 375 | Ga0501047_0062842 | |||
| 376 | Ga0501048_0047772 | |||
| 377 | Ga0501075_0089450 | |||
| 378 | Ga0501076_0054537 | |||
| 379 | Ga0501225_0000573 | |||
| 380 | Ga0501241_000704 | |||
| 381 | Ga0501044_0004493 | |||
| 382 | Ga0501284_00040 | |||
| 383 | nmdc:mga0yw44_178_c1 | |||
| 384 | nmdc:mga06z11_18424_c2 | |||
| 385 | nmdc:mga05p37_11686_c1 | |||
| 386 | nmdc:mga05p37_32521_c1 | |||
| 387 | nmdc:mga05p37_46227_c1 | |||
| 388 | nmdc:mga09592_25642_c1 | |||
| 389 | nmdc:mga08y16_103554_c1 | |||
| 390 | nmdc:mga08y16_14311_c1 | |||
| 391 | Ga0500643_011463 | |||
| 392 | Ga0500568_0012419 | |||
| 393 | Ga0500577_0000984 | |||
| 394 | Ga0500622_0000004 | |||
| 395 | Ga0500622_0000005 | |||
| 396 | Ga0500622_0000595 | |||
| 397 | Ga0501084_0001901 | |||
| 398 | 2511180630 | |||
| 399 | 2512638068 | |||
| 400 | 2512731728 | |||
| 401 | 2524189454 | |||
| 402 | 2550902417 | |||
| 403 | 2595316933 | |||
| 404 | 2621275333 | |||
| 405 | 2673166578 | |||
| 406 | 2673821410 | |||
| 407 | 2738724935 | |||
| 408 | 2738817012 | |||
| 409 | 2793182161 | |||
| 410 | 2816510207 | |||
| 411 | 2821112893 | |||
| 412 | 2857465386 | |||
| 413 | 2857467495 | |||
| 414 | 2857476869 | |||
| 415 | 2865008701 | |||
| 416 | 2881637647 | |||
| 417 | 2884793065 | |||
| 418 | 2888581642 | |||
| 419 | 2889049713 | |||
| 420 | 2896089929 | |||
| 421 | 2904757931 | |||
| 422 | 2907202924 | |||
| 423 | 2915601487 | |||
| 424 | 2915607759 | |||
| 425 | 2919426262 | |||
| 426 | 2929186671 | |||
| 427 | 2929209683 | |||
| 428 | 2971406231 | |||
| 429 | 2980183867 | |||
| 430 | 3001895549 | |||
| 431 | 8002318677 | |||
| 432 | 8054468643 | |||
| 433 | 8054800592 | |||
| 434 | 8055637675 | |||
| 435 | 8057474306 | |||
| 436 | 8057981761 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7sh1-assembly1.cif.gz_A | class ii uvra protein - ecm16 | 0.9144 | 6 | 715 |
| 7sh1-assembly1.cif.gz_B-2 | class ii uvra protein - ecm16 | 0.9117 | 6 | 715 |
| 7sh1-assembly1.cif.gz_A | class ii uvra protein - ecm16 | 0.8957 | 6 | 715 |
| 7sh1-assembly1.cif.gz_B-2 | class ii uvra protein - ecm16 | 0.8931 | 6 | 715 |
| 2r6f-assembly1.cif.gz_A | crystal structure of bacillus stearothermophilus uvra | 0.8296 | 8 | 715 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2r6fB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9353 | 9 | 437 | 3.40.50.300 |
| 2r6fB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9206 | 9 | 437 | 3.40.50.300 |
| 2vf7B01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.864 | 7 | 449 | 3.40.50.300 |
| 2ygrF01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8592 | 7 | 443 | 3.40.50.300 |
| 2vf8A03 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8558 | 451 | 715 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6B3FI07-F1-model_v4 | UvrABC system protein A (Excinuclease ABC subunit A) | 0.9696 | 265 | 405 |
GO:0003677
GO:0004518 GO:0005524 GO:0005737 GO:0006281 |
| AF-A0A352VZH5-F1-model_v4 | UvrABC system protein A (Excinuclease ABC subunit A) | 0.9683 | 262 | 428 |
GO:0003677
GO:0004518 GO:0005524 GO:0005737 GO:0006281 |
| AF-A0A540V411-F1-model_v4 | UvrABC system protein A (Excinuclease ABC subunit A) | 0.9632 | 263 | 444 |
GO:0003677
GO:0004518 GO:0005524 GO:0005737 GO:0006281 |
| AF-A0A3C0F6M3-F1-model_v4 | deleted | 0.958 | 265 | 477 |
|
| AF-A0A3S1F7G1-F1-model_v4 | UvrABC system protein A (Excinuclease ABC subunit A) | 0.9544 | 325 | 476 |
GO:0003677
GO:0004518 GO:0005524 GO:0005737 GO:0006281 |