F329675
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 218 | 152 | 436 | 484 |
Family's Representative Sequence
| Representative Sequence | 3300005468|Ga0070707_100000723|Ga0070707_10000072313 |
| Length | 524 |
| Sequence | MALVKFKAGKPETKKKKASNRHKGVRSRTVSEPVVSIASRSFEQAFKNIDDVLRKEAGCTTELDYTEQTSWLLFLKYLDGLEQDKADEAALDGKKYKYILDKPYRWESWAAPKTADGKLDHNKAMVGDDLRDFVNQKLFPYLHGFKERASGPNTIEYKIGEIFGEIKNKIQSGYNLREIVEHIDELRFRSQQEKHELSHLYEAKIKNMGNAGRNGGEYYTPRPLIRAIVQVIKPQLGEKIYDGACGSAGFLCESFDYLKANANLTTKNLVTLQTKTFYGKEKKSLAYVIAIMNMILHGIEAPNVIHTNTLSENLADIQERDRYDVVMANPPFGGKERKEVQQNFPIRTGETAFLFLQHFIKILKAGGRGGIVIKNTFLSNTDNASVSLRKLLLESCSLHTVLDCPGGTFQGAGVKTVVLFFEKGTKTRKIWYYQLDPGRSLGKTNPLNDADLTEFVKLQKTLADSPQSWTVDAKSIDQTTFDLSVKNPNGGEEIVHRSPQAIMDEIAALDAESAEVLGNIKALL |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 2 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 3 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 4 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 5 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 6 | 3300004625 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 | Metagenome | Endosphere |
| 7 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 8 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 10 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 11 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 12 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 20 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 22 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 23 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 25 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 26 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 27 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 28 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 29 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 30 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 31 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 32 | 3300007788 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 | Metagenome | Rhizosphere |
| 33 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Metagenome | Rhizosphere |
| 41 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 47 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 49 | 3300024227 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 | Metagenome | Rhizosphere |
| 50 | 3300025228 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300027512 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 70 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 72 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 73 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 74 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 75 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 76 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 77 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 78 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 79 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 80 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 81 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 82 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 83 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 84 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 85 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 86 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 87 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 88 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 89 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 90 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 91 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 92 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 93 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 94 | 3300041411 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 | Metagenome | Rhizosphere |
| 95 | 3300042016 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 | Metagenome | Rhizosphere |
| 96 | 3300042139 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 | Metagenome | Rhizosphere |
| 97 | 3300042156 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 | Metagenome | Rhizosphere |
| 98 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 99 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 100 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 101 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 102 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 111 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 112 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 113 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 114 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 115 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 116 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 117 | 3300049513 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control | Metagenome | Rhizosphere |
| 118 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 125 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300049665 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought | Metagenome | Rhizosphere |
| 128 | 3300049677 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control | Metagenome | Rhizosphere |
| 129 | 3300049686 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control | Metagenome | Rhizosphere |
| 130 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 131 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 133 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 134 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 135 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 136 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 137 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 138 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 139 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 140 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 141 | 3300055283 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere | Metagenome | Endosphere |
| 142 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 143 | 2513237098 | Bradyrhizobium elkanii WSM2783 | Isolate | Nodule |
| 144 | 2585428058 | Methylibium sp. CF468 | Isolate | Rhizosphere |
| 145 | 2721755755 | Bradyrhizobium icense LMTR 13 | Isolate | Nodule |
| 146 | 2874628541 | Bradyrhizobium betae Opo-243 | Isolate | Unclassified |
| 147 | 2883291878 | Hypericibacter terrae R5913 | Isolate | Rhizosphere |
| 148 | 2885427238 | Sphingomonas mesophila SYSUP0001 | Isolate | Stem Tuber |
| 149 | 2906635258 | Bradyrhizobium sp. USDA 3458 | Isolate | Unclassified |
| 150 | 2913912277 | Desmonostoc muscorum LEGE 12446 | Isolate | Unclassified |
| 151 | 2939622612 | Stenotrophomonas sp. 2619 | Isolate | Rhizosphere |
| 152 | 8019555841 | Bradyrhizobium sp. JR6.1 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.41 |
| Metatranscriptomes | 0 |
| Isolates | 4.59 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 6.88 |
| Nodule | 1.38 |
| Rhizoplane | 0.92 |
| Rhizosphere | 82.57 |
| Stem | 0 |
| Stem Tuber | 0.46 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070707_100000723 | 3300005468 | Bacteria | 32932 |
| 2 | JGI24739J22299_10000957 | 3300001989 | Bacteria | 10726 |
| 3 | JGI25165J46597_1001491 | 3300003214 | Bacteria | 11966 |
| 4 | JGI25160J50197_1003516 | 3300003354 | Bacteria | 6987 |
| 5 | Ga0055526_1000257 | 3300003771 | Bacteria | 44910 |
| 6 | Ga0055543_1010910 | 3300004625 | Bacteria | 1883 |
| 7 | Ga0065165_1000106 | 3300005262 | Bacteria | 140301 |
| 8 | Ga0070658_10062536 | 3300005327 | Bacteria | 3034 |
| 9 | Ga0070658_10103730 | 3300005327 | Bacteria | 2352 |
| 10 | Ga0070683_100210798 | 3300005329 | Bacteria | 1846 |
| 11 | Ga0070690_100012459 | 3300005330 | Bacteria | 5002 |
| 12 | Ga0068869_100009931 | 3300005334 | Bacteria | 6186 |
| 13 | Ga0070682_100015961 | 3300005337 | Bacteria | 4362 |
| 14 | Ga0070660_100013670 | 3300005339 | Bacteria | 5833 |
| 15 | Ga0070661_100014541 | 3300005344 | Bacteria | 5546 |
| 16 | Ga0070714_100119898 | 3300005435 | Bacteria | 2339 |
| 17 | Ga0070706_100010333 | 3300005467 | Bacteria | 8671 |
| 18 | Ga0070698_100002155 | 3300005471 | Bacteria | 21849 |
| 19 | Ga0070698_100021421 | 3300005471 | Bacteria | 6770 |
| 20 | Ga0070699_100000192 | 3300005518 | Bacteria | 59837 |
| 21 | Ga0070686_100000026 | 3300005544 | Bacteria | 126656 |
| 22 | Ga0070696_100000004 | 3300005546 | Bacteria | 126811 |
| 23 | Ga0070704_100020187 | 3300005549 | Bacteria | 4292 |
| 24 | Ga0068855_100166347 | 3300005563 | Bacteria | 2500 |
| 25 | Ga0070664_100011982 | 3300005564 | Bacteria | 7041 |
| 26 | Ga0068856_100061051 | 3300005614 | Bacteria | 3724 |
| 27 | Ga0068856_100178051 | 3300005614 | Bacteria | 2139 |
| 28 | Ga0068852_100001725 | 3300005616 | Bacteria | 14900 |
| 29 | Ga0068861_100000228 | 3300005719 | Bacteria | 30508 |
| 30 | Ga0068863_100007626 | 3300005841 | Bacteria | 10584 |
| 31 | Ga0068863_100183479 | 3300005841 | Bacteria | 2009 |
| 32 | Ga0068860_100008405 | 3300005843 | Bacteria | 10282 |
| 33 | Ga0081539_10012773 | 3300005985 | Bacteria | 6417 |
| 34 | Ga0075430_100000484 | 3300006846 | Bacteria | 29785 |
| 35 | Ga0075435_100009962 | 3300007076 | Bacteria | 6924 |
| 36 | Ga0099795_10000011 | 3300007788 | Bacteria | 78558 |
| 37 | Ga0105251_10004271 | 3300009011 | Bacteria | 9825 |
| 38 | Ga0111539_10222892 | 3300009094 | Bacteria | 2196 |
| 39 | Ga0105243_10004155 | 3300009148 | Bacteria | 11493 |
| 40 | Ga0105243_10146046 | 3300009148 | Bacteria | 2023 |
| 41 | Ga0105248_10189847 | 3300009177 | Bacteria | 2315 |
| 42 | Ga0105237_10029583 | 3300009545 | Bacteria | 5567 |
| 43 | Ga0105238_10015303 | 3300009551 | Bacteria | 7770 |
| 44 | Ga0105238_10029122 | 3300009551 | Bacteria | 5626 |
| 45 | Ga0105249_10013526 | 3300009553 | Bacteria | 7207 |
| 46 | Ga0099796_10000058 | 3300010159 | Bacteria | 19986 |
| 47 | Ga0105239_10049020 | 3300010375 | Bacteria | 4631 |
| 48 | Ga0105239_10067130 | 3300010375 | Bacteria | 3940 |
| 49 | Ga0157373_10006900 | 3300013100 | Bacteria | 8452 |
| 50 | Ga0157370_10004015 | 3300013104 | Bacteria | 17100 |
| 51 | Ga0157370_10018027 | 3300013104 | Bacteria | 7106 |
| 52 | Ga0157374_10000028 | 3300013296 | Bacteria | 213725 |
| 53 | Ga0157374_10131717 | 3300013296 | Bacteria | 2420 |
| 54 | Ga0163162_10005486 | 3300013306 | Bacteria | 12255 |
| 55 | Ga0163162_10008468 | 3300013306 | Bacteria | 10034 |
| 56 | Ga0163162_10133042 | 3300013306 | Bacteria | 2597 |
| 57 | Ga0182008_10014913 | 3300014497 | Bacteria | 4065 |
| 58 | Ga0182008_10019046 | 3300014497 | Bacteria | 3549 |
| 59 | Ga0182008_10066583 | 3300014497 | Bacteria | 1773 |
| 60 | Ga0157379_10001908 | 3300014968 | Bacteria | 17245 |
| 61 | Ga0182007_10003801 | 3300015262 | Bacteria | 7030 |
| 62 | Ga0182007_10004563 | 3300015262 | Bacteria | 6258 |
| 63 | Ga0182007_10006213 | 3300015262 | Bacteria | 5148 |
| 64 | Ga0228598_1006927 | 3300024227 | Bacteria | 2328 |
| 65 | Ga0209672_100875 | 3300025228 | Bacteria | 13778 |
| 66 | Ga0209233_1001003 | 3300025261 | Bacteria | 12067 |
| 67 | Ga0207426_1000459 | 3300025302 | Bacteria | 63901 |
| 68 | Ga0207713_1000914 | 3300025735 | Bacteria | 26549 |
| 69 | Ga0207705_10081679 | 3300025909 | Bacteria | 2356 |
| 70 | Ga0207684_10007936 | 3300025910 | Bacteria | 9483 |
| 71 | Ga0207693_10165157 | 3300025915 | Bacteria | 1742 |
| 72 | Ga0207657_10182039 | 3300025919 | Bacteria | 1698 |
| 73 | Ga0207657_10211248 | 3300025919 | Bacteria | 1557 |
| 74 | Ga0207649_10010506 | 3300025920 | Bacteria | 5088 |
| 75 | Ga0207649_10016233 | 3300025920 | Bacteria | 4194 |
| 76 | Ga0207646_10002120 | 3300025922 | Bacteria | 23745 |
| 77 | Ga0207694_10005976 | 3300025924 | Bacteria | 9326 |
| 78 | Ga0207694_10008382 | 3300025924 | Bacteria | 7806 |
| 79 | Ga0207664_10019293 | 3300025929 | Bacteria | 5037 |
| 80 | Ga0207709_10002498 | 3300025935 | Bacteria | 11519 |
| 81 | Ga0207667_10122319 | 3300025949 | Bacteria | 2681 |
| 82 | Ga0207702_10141738 | 3300026078 | Bacteria | 2176 |
| 83 | Ga0207641_10024213 | 3300026088 | Bacteria | 5004 |
| 84 | Ga0207641_10201980 | 3300026088 | Bacteria | 1833 |
| 85 | Ga0207675_100005782 | 3300026118 | Bacteria | 11823 |
| 86 | Ga0207698_10007651 | 3300026142 | Bacteria | 6775 |
| 87 | Ga0209179_1000037 | 3300027512 | Bacteria | 30658 |
| 88 | Ga0207428_10001930 | 3300027907 | Bacteria | 21005 |
| 89 | Ga0268264_10001721 | 3300028381 | Bacteria | 20143 |
| 90 | Ga0307517_10024263 | 3300028786 | Bacteria | 7487 |
| 91 | Ga0307517_10071789 | 3300028786 | Bacteria | 3097 |
| 92 | Ga0265338_10022666 | 3300028800 | Bacteria | 6489 |
| 93 | Ga0265338_10047599 | 3300028800 | Bacteria | 3914 |
| 94 | Ga0265330_10000563 | 3300031235 | Bacteria | 24181 |
| 95 | Ga0265328_10017192 | 3300031239 | Bacteria | 2803 |
| 96 | Ga0265329_10012002 | 3300031242 | Bacteria | 3130 |
| 97 | Ga0265339_10063576 | 3300031249 | Bacteria | 1982 |
| 98 | Ga0265331_10000386 | 3300031250 | Bacteria | 45933 |
| 99 | Ga0265331_10009608 | 3300031250 | Bacteria | 5420 |
| 100 | Ga0265331_10067464 | 3300031250 | Bacteria | 1678 |
| 101 | Ga0265327_10000116 | 3300031251 | Bacteria | 173745 |
| 102 | Ga0265327_10005682 | 3300031251 | Bacteria | 10316 |
| 103 | Ga0265327_10006234 | 3300031251 | Bacteria | 9607 |
| 104 | Ga0265316_10005856 | 3300031344 | Bacteria | 11846 |
| 105 | Ga0265316_10042849 | 3300031344 | Bacteria | 3614 |
| 106 | Ga0265316_10058766 | 3300031344 | Bacteria | 2993 |
| 107 | Ga0265316_10072664 | 3300031344 | Bacteria | 2649 |
| 108 | Ga0307513_10006976 | 3300031456 | Bacteria | 14690 |
| 109 | Ga0307408_100000036 | 3300031548 | Bacteria | 197635 |
| 110 | Ga0307408_100007677 | 3300031548 | Bacteria | 7133 |
| 111 | Ga0307508_10001315 | 3300031616 | Bacteria | 28115 |
| 112 | Ga0307514_10011232 | 3300031649 | Bacteria | 7447 |
| 113 | Ga0265314_10016416 | 3300031711 | Bacteria | 5849 |
| 114 | Ga0265314_10053999 | 3300031711 | Bacteria | 2783 |
| 115 | Ga0265342_10000996 | 3300031712 | Bacteria | 27934 |
| 116 | Ga0307516_10002552 | 3300031730 | Bacteria | 24210 |
| 117 | Ga0307510_10117540 | 3300033180 | Bacteria | 2376 |
| 118 | Ga0395899_0000003 | 3300037312 | Bacteria | 1232684 |
| 119 | Ga0395899_0008660 | 3300037312 | Bacteria | 7828 |
| 120 | Ga0395899_0094620 | 3300037312 | Bacteria | 2162 |
| 121 | Ga0395900_0001978 | 3300037418 | Bacteria | 23133 |
| 122 | Ga0395900_0016435 | 3300037418 | Bacteria | 7545 |
| 123 | Ga0395898_0001085 | 3300037466 | Bacteria | 42099 |
| 124 | Ga0395898_0017808 | 3300037466 | Bacteria | 7248 |
| 125 | Ga0395898_0019462 | 3300037466 | Bacteria | 6907 |
| 126 | Ga0395898_0075712 | 3300037466 | Bacteria | 3251 |
| 127 | Ga0395898_0254847 | 3300037466 | Bacteria | 1673 |
| 128 | Ga0395905_0017927 | 3300037471 | Bacteria | 6725 |
| 129 | Ga0395905_0114006 | 3300037471 | Bacteria | 2540 |
| 130 | Ga0395901_0027947 | 3300038443 | Bacteria | 5800 |
| 131 | Ga0395901_0054534 | 3300038443 | Bacteria | 4155 |
| 132 | Ga0436365_1429203 | 3300039437 | Bacteria | 8681 |
| 133 | Ga0439466_0025708 | 3300041411 | Bacteria | 2053 |
| 134 | Ga0439463_000871 | 3300042016 | Bacteria | 8307 |
| 135 | Ga0450904_000731 | 3300042139 | Bacteria | 5724 |
| 136 | Ga0439446_0009864 | 3300042156 | Bacteria | 2562 |
| 137 | Ga0451577_0000001 | 3300042876 | Bacteria | 2461803 |
| 138 | Ga0451577_0000002 | 3300042876 | Bacteria | 1731375 |
| 139 | Ga0451577_0000702 | 3300042876 | Bacteria | 52353 |
| 140 | Ga0451577_0047959 | 3300042876 | Bacteria | 3817 |
| 141 | Ga0453683_0000011 | 3300044673 | Bacteria | 412765 |
| 142 | Ga0453683_0000034 | 3300044673 | Bacteria | 235218 |
| 143 | Ga0453683_0000315 | 3300044673 | Bacteria | 59982 |
| 144 | Ga0453683_0002397 | 3300044673 | Bacteria | 14632 |
| 145 | Ga0453684_0000002 | 3300044712 | Bacteria | 1731375 |
| 146 | Ga0453684_0000361 | 3300044712 | Bacteria | 188097 |
| 147 | Ga0453684_0002686 | 3300044712 | Bacteria | 42328 |
| 148 | Ga0453684_0005573 | 3300044712 | Bacteria | 24814 |
| 149 | Ga0453684_0006831 | 3300044712 | Bacteria | 21458 |
| 150 | Ga0453684_0009013 | 3300044712 | Bacteria | 17618 |
| 151 | Ga0453684_0017600 | 3300044712 | Bacteria | 11054 |
| 152 | Ga0453684_0036365 | 3300044712 | Bacteria | 6787 |
| 153 | Ga0453684_0329098 | 3300044712 | Bacteria | 1728 |
| 154 | Ga0451576_0000004 | 3300045051 | Bacteria | 1312238 |
| 155 | Ga0451576_0000107 | 3300045051 | Bacteria | 212456 |
| 156 | Ga0451576_0001816 | 3300045051 | Bacteria | 34786 |
| 157 | Ga0451576_0002446 | 3300045051 | Bacteria | 27697 |
| 158 | Ga0451576_0009559 | 3300045051 | Bacteria | 11227 |
| 159 | Ga0495584_0004932 | 3300046491 | Bacteria | 7116 |
| 160 | Ga0495585_0000337 | 3300046492 | Bacteria | 45680 |
| 161 | Ga0495610_0030746 | 3300046512 | Bacteria | 2809 |
| 162 | Ga0495618_0085932 | 3300046514 | Bacteria | 2011 |
| 163 | Ga0495656_0050877 | 3300046615 | Bacteria | 1771 |
| 164 | Ga0495625_0000014 | 3300046660 | Bacteria | 323486 |
| 165 | Ga0495680_0012133 | 3300047322 | Bacteria | 7603 |
| 166 | Ga0495673_0001666 | 3300047469 | Bacteria | 17102 |
| 167 | Ga0495673_0009965 | 3300047469 | Bacteria | 5207 |
| 168 | Ga0496102_0002284 | 3300048905 | Bacteria | 16382 |
| 169 | Ga0496103_0000845 | 3300048906 | Bacteria | 22406 |
| 170 | Ga0496117_0006966 | 3300048920 | Bacteria | 11207 |
| 171 | Ga0496118_0004990 | 3300048921 | Bacteria | 15338 |
| 172 | Ga0496118_0019583 | 3300048921 | Bacteria | 6042 |
| 173 | Ga0496122_0010434 | 3300048925 | Bacteria | 9576 |
| 174 | Ga0496123_0012107 | 3300048926 | Bacteria | 7390 |
| 175 | Ga0496126_0194671 | 3300048929 | Bacteria | 1715 |
| 176 | Ga0501290_001491 | 3300049513 | Bacteria | 3197 |
| 177 | Ga0501032_0000896 | 3300049569 | Bacteria | 24141 |
| 178 | Ga0501032_0013168 | 3300049569 | Bacteria | 5886 |
| 179 | Ga0501032_0084801 | 3300049569 | Bacteria | 2106 |
| 180 | Ga0501033_0001187 | 3300049570 | Bacteria | 23521 |
| 181 | Ga0501033_0012012 | 3300049570 | Bacteria | 6615 |
| 182 | Ga0501034_0000270 | 3300049571 | Bacteria | 94119 |
| 183 | Ga0501034_0015898 | 3300049571 | Bacteria | 7727 |
| 184 | Ga0501037_0023677 | 3300049573 | Bacteria | 4540 |
| 185 | Ga0501038_0000690 | 3300049574 | Bacteria | 30033 |
| 186 | Ga0501038_0005803 | 3300049574 | Bacteria | 11436 |
| 187 | Ga0501040_0000028 | 3300049576 | Bacteria | 64790 |
| 188 | Ga0501042_0011343 | 3300049578 | Bacteria | 6010 |
| 189 | Ga0501043_0155319 | 3300049579 | Bacteria | 1789 |
| 190 | Ga0501047_0021146 | 3300049581 | Bacteria | 6248 |
| 191 | Ga0501227_006952 | 3300049665 | Bacteria | 2424 |
| 192 | Ga0501247_000755 | 3300049677 | Bacteria | 2792 |
| 193 | Ga0501257_000050 | 3300049686 | Bacteria | 33034 |
| 194 | Ga0501035_0011433 | 3300049822 | Bacteria | 8229 |
| 195 | Ga0501044_0021529 | 3300049823 | Bacteria | 6876 |
| 196 | Ga0501044_0100065 | 3300049823 | Bacteria | 2917 |
| 197 | nmdc:mga05p37_208469_c1 | 3300050507 | Bacteria | 2363 |
| 198 | nmdc:mga0qj67_102_c1 | 3300050509 | Bacteria | 56790 |
| 199 | nmdc:mga08y16_4055_c1 | 3300050511 | Bacteria | 15288 |
| 200 | nmdc:mga0rr50_4230_c1 | 3300050513 | Bacteria | 8395 |
| 201 | Ga0500644_0001416 | 3300053088 | Bacteria | 6374 |
| 202 | Ga0500646_0010950 | 3300053090 | Bacteria | 2330 |
| 203 | Ga0500595_002186 | 3300053119 | Bacteria | 9933 |
| 204 | Ga0500595_003138 | 3300053119 | Bacteria | 7835 |
| 205 | Ga0500604_0000301 | 3300053151 | Bacteria | 13749 |
| 206 | Ga0500616_0002041 | 3300053153 | Bacteria | 17777 |
| 207 | Ga0500661_000181 | 3300055283 | Bacteria | 11004 |
| 208 | Ga0501082_0019265 | 3300060353 | Bacteria | 5882 |
| 209 | 2513673859 | 2513237098 | Bacteria | 9902361 |
| 210 | 2587733616 | 2585428058 | Bacteria | 6853932 |
| 211 | 2723849001 | 2721755755 | Bacteria | 8322773 |
| 212 | 2874628564 | 2874628541 | Bacteria | 8630250 |
| 213 | 2883295843 | 2883291878 | Bacteria | 5894118 |
| 214 | 2885429539 | 2885427238 | Bacteria | 2291351 |
| 215 | 2906643599 | 2906635258 | Bacteria | 8601019 |
| 216 | 2913920599 | 2913912277 | Bacteria | 9037797 |
| 217 | 2939625062 | 2939622612 | Bacteria | 4698046 |
| 218 | 8019564243 | 8019555841 | Bacteria | 9642137 |
| 219 | Ga0070707_100000723 | |||
| 220 | JGI24739J22299_10000957 | |||
| 221 | JGI25165J46597_1001491 | |||
| 222 | JGI25160J50197_1003516 | |||
| 223 | Ga0055526_1000257 | |||
| 224 | Ga0055543_1010910 | |||
| 225 | Ga0065165_1000106 | |||
| 226 | Ga0070658_10062536 | |||
| 227 | Ga0070658_10103730 | |||
| 228 | Ga0070683_100210798 | |||
| 229 | Ga0070690_100012459 | |||
| 230 | Ga0068869_100009931 | |||
| 231 | Ga0070682_100015961 | |||
| 232 | Ga0070660_100013670 | |||
| 233 | Ga0070661_100014541 | |||
| 234 | Ga0070714_100119898 | |||
| 235 | Ga0070706_100010333 | |||
| 236 | Ga0070698_100002155 | |||
| 237 | Ga0070698_100021421 | |||
| 238 | Ga0070699_100000192 | |||
| 239 | Ga0070686_100000026 | |||
| 240 | Ga0070696_100000004 | |||
| 241 | Ga0070704_100020187 | |||
| 242 | Ga0068855_100166347 | |||
| 243 | Ga0070664_100011982 | |||
| 244 | Ga0068856_100061051 | |||
| 245 | Ga0068856_100178051 | |||
| 246 | Ga0068852_100001725 | |||
| 247 | Ga0068861_100000228 | |||
| 248 | Ga0068863_100007626 | |||
| 249 | Ga0068863_100183479 | |||
| 250 | Ga0068860_100008405 | |||
| 251 | Ga0081539_10012773 | |||
| 252 | Ga0075430_100000484 | |||
| 253 | Ga0075435_100009962 | |||
| 254 | Ga0099795_10000011 | |||
| 255 | Ga0105251_10004271 | |||
| 256 | Ga0111539_10222892 | |||
| 257 | Ga0105243_10004155 | |||
| 258 | Ga0105243_10146046 | |||
| 259 | Ga0105248_10189847 | |||
| 260 | Ga0105237_10029583 | |||
| 261 | Ga0105238_10015303 | |||
| 262 | Ga0105238_10029122 | |||
| 263 | Ga0105249_10013526 | |||
| 264 | Ga0099796_10000058 | |||
| 265 | Ga0105239_10049020 | |||
| 266 | Ga0105239_10067130 | |||
| 267 | Ga0157373_10006900 | |||
| 268 | Ga0157370_10004015 | |||
| 269 | Ga0157370_10018027 | |||
| 270 | Ga0157374_10000028 | |||
| 271 | Ga0157374_10131717 | |||
| 272 | Ga0163162_10005486 | |||
| 273 | Ga0163162_10008468 | |||
| 274 | Ga0163162_10133042 | |||
| 275 | Ga0182008_10014913 | |||
| 276 | Ga0182008_10019046 | |||
| 277 | Ga0182008_10066583 | |||
| 278 | Ga0157379_10001908 | |||
| 279 | Ga0182007_10003801 | |||
| 280 | Ga0182007_10004563 | |||
| 281 | Ga0182007_10006213 | |||
| 282 | Ga0228598_1006927 | |||
| 283 | Ga0209672_100875 | |||
| 284 | Ga0209233_1001003 | |||
| 285 | Ga0207426_1000459 | |||
| 286 | Ga0207713_1000914 | |||
| 287 | Ga0207705_10081679 | |||
| 288 | Ga0207684_10007936 | |||
| 289 | Ga0207693_10165157 | |||
| 290 | Ga0207657_10182039 | |||
| 291 | Ga0207657_10211248 | |||
| 292 | Ga0207649_10010506 | |||
| 293 | Ga0207649_10016233 | |||
| 294 | Ga0207646_10002120 | |||
| 295 | Ga0207694_10005976 | |||
| 296 | Ga0207694_10008382 | |||
| 297 | Ga0207664_10019293 | |||
| 298 | Ga0207709_10002498 | |||
| 299 | Ga0207667_10122319 | |||
| 300 | Ga0207702_10141738 | |||
| 301 | Ga0207641_10024213 | |||
| 302 | Ga0207641_10201980 | |||
| 303 | Ga0207675_100005782 | |||
| 304 | Ga0207698_10007651 | |||
| 305 | Ga0209179_1000037 | |||
| 306 | Ga0207428_10001930 | |||
| 307 | Ga0268264_10001721 | |||
| 308 | Ga0307517_10024263 | |||
| 309 | Ga0307517_10071789 | |||
| 310 | Ga0265338_10022666 | |||
| 311 | Ga0265338_10047599 | |||
| 312 | Ga0265330_10000563 | |||
| 313 | Ga0265328_10017192 | |||
| 314 | Ga0265329_10012002 | |||
| 315 | Ga0265339_10063576 | |||
| 316 | Ga0265331_10000386 | |||
| 317 | Ga0265331_10009608 | |||
| 318 | Ga0265331_10067464 | |||
| 319 | Ga0265327_10000116 | |||
| 320 | Ga0265327_10005682 | |||
| 321 | Ga0265327_10006234 | |||
| 322 | Ga0265316_10005856 | |||
| 323 | Ga0265316_10042849 | |||
| 324 | Ga0265316_10058766 | |||
| 325 | Ga0265316_10072664 | |||
| 326 | Ga0307513_10006976 | |||
| 327 | Ga0307408_100000036 | |||
| 328 | Ga0307408_100007677 | |||
| 329 | Ga0307508_10001315 | |||
| 330 | Ga0307514_10011232 | |||
| 331 | Ga0265314_10016416 | |||
| 332 | Ga0265314_10053999 | |||
| 333 | Ga0265342_10000996 | |||
| 334 | Ga0307516_10002552 | |||
| 335 | Ga0307510_10117540 | |||
| 336 | Ga0395899_0000003 | |||
| 337 | Ga0395899_0008660 | |||
| 338 | Ga0395899_0094620 | |||
| 339 | Ga0395900_0001978 | |||
| 340 | Ga0395900_0016435 | |||
| 341 | Ga0395898_0001085 | |||
| 342 | Ga0395898_0017808 | |||
| 343 | Ga0395898_0019462 | |||
| 344 | Ga0395898_0075712 | |||
| 345 | Ga0395898_0254847 | |||
| 346 | Ga0395905_0017927 | |||
| 347 | Ga0395905_0114006 | |||
| 348 | Ga0395901_0027947 | |||
| 349 | Ga0395901_0054534 | |||
| 350 | Ga0436365_1429203 | |||
| 351 | Ga0439466_0025708 | |||
| 352 | Ga0439463_000871 | |||
| 353 | Ga0450904_000731 | |||
| 354 | Ga0439446_0009864 | |||
| 355 | Ga0451577_0000001 | |||
| 356 | Ga0451577_0000002 | |||
| 357 | Ga0451577_0000702 | |||
| 358 | Ga0451577_0047959 | |||
| 359 | Ga0453683_0000011 | |||
| 360 | Ga0453683_0000034 | |||
| 361 | Ga0453683_0000315 | |||
| 362 | Ga0453683_0002397 | |||
| 363 | Ga0453684_0000002 | |||
| 364 | Ga0453684_0000361 | |||
| 365 | Ga0453684_0002686 | |||
| 366 | Ga0453684_0005573 | |||
| 367 | Ga0453684_0006831 | |||
| 368 | Ga0453684_0009013 | |||
| 369 | Ga0453684_0017600 | |||
| 370 | Ga0453684_0036365 | |||
| 371 | Ga0453684_0329098 | |||
| 372 | Ga0451576_0000004 | |||
| 373 | Ga0451576_0000107 | |||
| 374 | Ga0451576_0001816 | |||
| 375 | Ga0451576_0002446 | |||
| 376 | Ga0451576_0009559 | |||
| 377 | Ga0495584_0004932 | |||
| 378 | Ga0495585_0000337 | |||
| 379 | Ga0495610_0030746 | |||
| 380 | Ga0495618_0085932 | |||
| 381 | Ga0495656_0050877 | |||
| 382 | Ga0495625_0000014 | |||
| 383 | Ga0495680_0012133 | |||
| 384 | Ga0495673_0001666 | |||
| 385 | Ga0495673_0009965 | |||
| 386 | Ga0496102_0002284 | |||
| 387 | Ga0496103_0000845 | |||
| 388 | Ga0496117_0006966 | |||
| 389 | Ga0496118_0004990 | |||
| 390 | Ga0496118_0019583 | |||
| 391 | Ga0496122_0010434 | |||
| 392 | Ga0496123_0012107 | |||
| 393 | Ga0496126_0194671 | |||
| 394 | Ga0501290_001491 | |||
| 395 | Ga0501032_0000896 | |||
| 396 | Ga0501032_0013168 | |||
| 397 | Ga0501032_0084801 | |||
| 398 | Ga0501033_0001187 | |||
| 399 | Ga0501033_0012012 | |||
| 400 | Ga0501034_0000270 | |||
| 401 | Ga0501034_0015898 | |||
| 402 | Ga0501037_0023677 | |||
| 403 | Ga0501038_0000690 | |||
| 404 | Ga0501038_0005803 | |||
| 405 | Ga0501040_0000028 | |||
| 406 | Ga0501042_0011343 | |||
| 407 | Ga0501043_0155319 | |||
| 408 | Ga0501047_0021146 | |||
| 409 | Ga0501227_006952 | |||
| 410 | Ga0501247_000755 | |||
| 411 | Ga0501257_000050 | |||
| 412 | Ga0501035_0011433 | |||
| 413 | Ga0501044_0021529 | |||
| 414 | Ga0501044_0100065 | |||
| 415 | nmdc:mga05p37_208469_c1 | |||
| 416 | nmdc:mga0qj67_102_c1 | |||
| 417 | nmdc:mga08y16_4055_c1 | |||
| 418 | nmdc:mga0rr50_4230_c1 | |||
| 419 | Ga0500644_0001416 | |||
| 420 | Ga0500646_0010950 | |||
| 421 | Ga0500595_002186 | |||
| 422 | Ga0500595_003138 | |||
| 423 | Ga0500604_0000301 | |||
| 424 | Ga0500616_0002041 | |||
| 425 | Ga0500661_000181 | |||
| 426 | Ga0501082_0019265 | |||
| 427 | 2513673859 | |||
| 428 | 2587733616 | |||
| 429 | 2723849001 | |||
| 430 | 2874628564 | |||
| 431 | 2883295843 | |||
| 432 | 2885429539 | |||
| 433 | 2906643599 | |||
| 434 | 2913920599 | |||
| 435 | 2939625062 | |||
| 436 | 8019564243 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5ybb-assembly1.cif.gz_B | structural basis underlying complex assembly andconformational transition of the type i r-m system | 0.8093 | 33 | 504 |
| 2okc-assembly1.cif.gz_A | crystal structure of type i restriction enzyme stysji m protein (np_813429.1) from bacteroides thetaiotaomicron vpi-5482 at 2.20 a resolution | 0.8021 | 42 | 468 |
| 3ufb-assembly1.cif.gz_A | crystal structure of a modification subunit of a putative type i restriction enzyme from vibrio vulnificus yj016 | 0.7988 | 30 | 470 |
| 2okc-assembly1.cif.gz_A | crystal structure of type i restriction enzyme stysji m protein (np_813429.1) from bacteroides thetaiotaomicron vpi-5482 at 2.20 a resolution | 0.7968 | 42 | 468 |
| 2okc-assembly2.cif.gz_B | crystal structure of type i restriction enzyme stysji m protein (np_813429.1) from bacteroides thetaiotaomicron vpi-5482 at 2.20 a resolution | 0.7911 | 40 | 468 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P08957_150_472_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.9123 | 200 | 435 | 3.40.50.150 |
| 3ufbA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.9009 | 171 | 470 | 3.40.50.150 |
| 5ybbB02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8501 | 171 | 504 | 3.40.50.150 |
| 2okcB02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8418 | 178 | 468 | 3.40.50.150 |
| 3ufbA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8344 | 171 | 470 | 3.40.50.150 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A286U2Z3-F1-model_v4 | site-specific DNA-methyltransferase (adenine-specific) (EC 2.1.1.72) | 0.9862 | 321 | 408 |
GO:0003677
GO:0008170 GO:0009307 GO:0032259 |
| AF-A0A0S4LGT3-F1-model_v4 | Type I restriction-modification system, methyltransferase subunit | 0.9783 | 40 | 180 |
GO:0009007
GO:0009307 GO:0032259 |
| AF-A0A286TYH6-F1-model_v4 | site-specific DNA-methyltransferase (adenine-specific) (EC 2.1.1.72) | 0.9745 | 158 | 419 |
GO:0003677
GO:0008170 GO:0009007 GO:0009307 GO:0032259 |
| AF-A0A347TJZ0-F1-model_v4 | site-specific DNA-methyltransferase (adenine-specific) (EC 2.1.1.72) | 0.9707 | 40 | 418 |
GO:0003677
GO:0008170 GO:0009007 GO:0009307 GO:0032259 |
| AF-A0A3D4BMW1-F1-model_v4 | site-specific DNA-methyltransferase (adenine-specific) (EC 2.1.1.72) | 0.9669 | 40 | 427 |
GO:0003677
GO:0004519 GO:0008170 GO:0009007 GO:0009307 GO:0032259 |