F329913

General Info

Members Datasets Scaffolds Average Seq Length
218 141 437 361

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10074348|Ga0105248_100743481
Length 391
Sequence MGFNKTTPFSNPRFSIRYIQNEKKMEKFSYVKESTKKFLLTMLCFGIYVFANAQLLKVAVAGLSHDHAHTIMHQFKEGKVIILGIAESDQALVERYKKTYQLPDSLFFSNLNALLDKKKPDAVLAFNSIIEHEAVVSTCAPRGISVMVEKPLATTVQAAEKMAALARQHHILLLTNYETTWYKTNHEVADLINQKNTIGPIRKMVVHDGHQGPKEIGCSKEFLNWLTDPVKNGGGAVIDFGCYGANLMTWLMGGIAPKSVMAITRQIKPDVYPNVDDDATILLEYENATGIIEASWNWPYGIKDMEVFGRNGYLHALNGNDLIYKADTGTYRSISVQSLKYPDNLNYLAAALKSEVQEKNDLSSLENNLIVVKILEAAKESSKTGKRVVLK

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
65 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
66 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
68 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
93 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
94 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
95 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
96 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
97 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
98 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
99 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
100 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
101 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
102 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
103 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
104 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
105 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
106 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
107 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
108 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
109 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
110 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
111 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
112 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
113 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
114 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
117 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
118 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
119 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
121 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
122 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
123 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
124 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
125 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
126 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
127 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
128 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
129 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
130 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
131 2818991437 Pedobacter terrae 518 Isolate Unclassified
132 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
133 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
134 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
135 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
136 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
137 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
138 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
139 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
140 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
141 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.95
Metatranscriptomes 0
Isolates 5.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.88
Nodule 0
Rhizoplane 0.46
Rhizosphere 83.94
Stem 0
Stem Tuber 0
Unclassified 13.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10074348 3300009177 Bacteria 3819
2 JGI24740J21852_10002880 3300001979 Bacteria 7690
3 JGI24739J22299_10004407 3300001989 Bacteria 5394
4 JGI25154J39366_1000005 3300002738 Bacteria 345115
5 JGI25157J39369_1006134 3300002741 Unclassified 1867
6 JGI25406J46586_10002476 3300003203 Bacteria 8732
7 JGI25153J46596_10003493 3300003215 Bacteria 8777
8 rootH1_10182078 3300003316 Bacteria 1658
9 rootH2_10001414 3300003320 Bacteria 59840
10 rootH2_10014134 3300003320 Bacteria 15342
11 rootH1_10091449 3300003316 Bacteria 6470
12 rootH1_10091449 3300003323 Bacteria 3171
13 Ga0055542_1002194 3300003762 Bacteria 6976
14 Ga0070658_10000049 3300005327 Bacteria 119985
15 Ga0070683_100106876 3300005329 Bacteria 2638
16 Ga0070683_100121086 3300005329 Bacteria 2472
17 Ga0070680_100007801 3300005336 Bacteria 8156
18 Ga0070682_100000890 3300005337 Bacteria 17439
19 Ga0070660_100018187 3300005339 Bacteria 5131
20 Ga0070660_100171609 3300005339 Bacteria 1752
21 Ga0070691_10000810 3300005341 Bacteria 12515
22 Ga0070691_10004512 3300005341 Bacteria 6319
23 Ga0070671_100005460 3300005355 Bacteria 10149
24 Ga0070659_100286283 3300005366 Unclassified 1371
25 Ga0070667_100023144 3300005367 Bacteria 5154
26 Ga0070663_100147312 3300005455 Unclassified 1802
27 Ga0070678_100176512 3300005456 Unclassified 1745
28 Ga0070681_10015715 3300005458 Bacteria 7543
29 Ga0068867_100090380 3300005459 Unclassified 2323
30 Ga0070684_100024989 3300005535 Bacteria 5016
31 Ga0068853_100003352 3300005539 Bacteria 12261
32 Ga0068853_100035169 3300005539 Bacteria 4254
33 Ga0068853_100043883 3300005539 Bacteria 3826
34 Ga0068853_100118717 3300005539 Bacteria 2357
35 Ga0068853_100407572 3300005539 Bacteria 1273
36 Ga0070693_100009121 3300005547 Bacteria 4925
37 Ga0070665_100000052 3300005548 Bacteria 245694
38 Ga0068855_100051208 3300005563 Unclassified 4864
39 Ga0068855_100051912 3300005563 Bacteria 4830
40 Ga0070664_100167003 3300005564 Unclassified 1950
41 Ga0068857_100011753 3300005577 Bacteria 7613
42 Ga0068854_100019250 3300005578 Bacteria 4597
43 Ga0068856_100001044 3300005614 Bacteria 29392
44 Ga0068852_100000133 3300005616 Bacteria 49905
45 Ga0068852_100068475 3300005616 Bacteria 3107
46 Ga0068852_100391592 3300005616 Bacteria 1365
47 Ga0068864_100133089 3300005618 Bacteria 2236
48 Ga0068863_100167671 3300005841 Unclassified 2106
49 Ga0068860_100002170 3300005843 Bacteria 20661
50 Ga0068860_100009323 3300005843 Bacteria 9752
51 Ga0068860_100014468 3300005843 Bacteria 7726
52 Ga0068860_100117207 3300005843 Bacteria 2548
53 Ga0081540_1013407 3300005983 Bacteria 5328
54 Ga0081539_10000037 3300005985 Bacteria 296160
55 Ga0097621_100000606 3300006237 Bacteria 25267
56 Ga0097621_100004447 3300006237 Bacteria 9758
57 Ga0097621_100018796 3300006237 Bacteria 5288
58 Ga0068871_100000334 3300006358 Bacteria 32598
59 Ga0068871_100022952 3300006358 Bacteria 4818
60 Ga0105240_10000063 3300009093 Bacteria 215936
61 Ga0105240_10000071 3300009093 Bacteria 204197
62 Ga0105240_10002411 3300009093 Bacteria 30047
63 Ga0105240_10006121 3300009093 Bacteria 17751
64 Ga0105240_10021884 3300009093 Bacteria 8494
65 Ga0105240_10430136 3300009093 Bacteria 1481
66 Ga0105243_10094454 3300009148 Bacteria 2469
67 Ga0105241_10020283 3300009174 Bacteria 4910
68 Ga0105241_10070233 3300009174 Bacteria 2717
69 Ga0105237_10001134 3300009545 Bacteria 35751
70 Ga0105237_10001747 3300009545 Bacteria 28074
71 Ga0105237_10005152 3300009545 Bacteria 14792
72 Ga0105237_10155047 3300009545 Bacteria 2287
73 Ga0105238_10019119 3300009551 Bacteria 6979
74 Ga0105238_10023921 3300009551 Bacteria 6227
75 Ga0105238_10310589 3300009551 Bacteria 1561
76 Ga0105249_10079088 3300009553 Bacteria 3052
77 Ga0105239_10000566 3300010375 Bacteria 53074
78 Ga0105239_10021449 3300010375 Bacteria 7121
79 Ga0105239_10044872 3300010375 Bacteria 4845
80 Ga0157373_10004906 3300013100 Bacteria 10074
81 Ga0157371_10127948 3300013102 Bacteria 1806
82 Ga0157370_10011288 3300013104 Bacteria 9364
83 Ga0157370_10078524 3300013104 Bacteria 3108
84 Ga0157370_10139238 3300013104 Unclassified 2261
85 Ga0157369_10026606 3300013105 Bacteria 6416
86 Ga0157369_10176614 3300013105 Unclassified 2248
87 Ga0157374_10000001 3300013296 Bacteria 1077351
88 Ga0157374_10028776 3300013296 Bacteria 5023
89 Ga0157374_10226359 3300013296 Bacteria 1836
90 Ga0157378_10012618 3300013297 Bacteria 7396
91 Ga0157378_10265038 3300013297 Unclassified 1650
92 Ga0163162_10000166 3300013306 Bacteria 60654
93 Ga0163162_10000214 3300013306 Bacteria 53543
94 Ga0163162_10105643 3300013306 Unclassified 2910
95 Ga0163162_10202067 3300013306 Bacteria 2116
96 Ga0163162_10297621 3300013306 Bacteria 1745
97 Ga0157372_10007805 3300013307 Bacteria 11367
98 Ga0157375_10000125 3300013308 Bacteria 75607
99 Ga0163163_10172464 3300014325 Bacteria 2210
100 Ga0157379_10006414 3300014968 Bacteria 10131
101 Ga0157379_10037760 3300014968 Bacteria 4307
102 Ga0157376_10001900 3300014969 Bacteria 13949
103 Ga0157376_10002152 3300014969 Bacteria 13267
104 Ga0157376_10010589 3300014969 Bacteria 6753
105 Ga0157376_10076480 3300014969 Unclassified 2860
106 Ga0157376_10208570 3300014969 Unclassified 1802
107 Ga0182005_1000215 3300015265 Bacteria 38214
108 Ga0163161_10007816 3300017792 Bacteria 7398
109 Ga0163161_10018601 3300017792 Bacteria 4868
110 Ga0163161_10033839 3300017792 Unclassified 3653
111 Ga0163161_10097896 3300017792 Bacteria 2179
112 Ga0209258_100219 3300025242 Bacteria 108974
113 Ga0209646_1000017 3300025246 Bacteria 488265
114 Ga0209026_1000296 3300025250 Bacteria 54741
115 Ga0209148_1000283 3300025254 Bacteria 77780
116 Ga0209758_1006422 3300025297 Bacteria 8461
117 Ga0209758_1016031 3300025297 Unclassified 3832
118 Ga0207426_1000377 3300025302 Bacteria 77705
119 Ga0207426_1007805 3300025302 Bacteria 4426
120 Ga0207654_10002610 3300025911 Bacteria 9144
121 Ga0207707_10001244 3300025912 Bacteria 23897
122 Ga0207695_10000068 3300025913 Bacteria 324859
123 Ga0207695_10000133 3300025913 Bacteria 222573
124 Ga0207695_10022709 3300025913 Bacteria 7111
125 Ga0207695_10080003 3300025913 Bacteria 3310
126 Ga0207695_10092029 3300025913 Bacteria 3044
127 Ga0207695_10103850 3300025913 Bacteria 2833
128 Ga0207695_10215233 3300025913 Unclassified 1830
129 Ga0207671_10001716 3300025914 Bacteria 24737
130 Ga0207671_10003818 3300025914 Bacteria 14746
131 Ga0207671_10011692 3300025914 Bacteria 7114
132 Ga0207671_10018833 3300025914 Bacteria 5290
133 Ga0207657_10005606 3300025919 Bacteria 13104
134 Ga0207649_10187478 3300025920 Unclassified 1452
135 Ga0207694_10078554 3300025924 Bacteria 2587
136 Ga0207694_10098914 3300025924 Bacteria 2310
137 Ga0207694_10129501 3300025924 Unclassified 2022
138 Ga0207650_10107535 3300025925 Bacteria 2155
139 Ga0207644_10007168 3300025931 Bacteria 7263
140 Ga0207706_10005503 3300025933 Bacteria 11810
141 Ga0207704_10077800 3300025938 Unclassified 2131
142 Ga0207689_10004189 3300025942 Bacteria 13113
143 Ga0207689_10364960 3300025942 Bacteria 1201
144 Ga0207661_10342679 3300025944 Bacteria 1347
145 Ga0207667_10041989 3300025949 Unclassified 4864
146 Ga0207667_10097728 3300025949 Bacteria 3030
147 Ga0207667_10098013 3300025949 Unclassified 3025
148 Ga0207658_10076484 3300025986 Unclassified 2550
149 Ga0207639_10013299 3300026041 Bacteria 5756
150 Ga0207639_10044342 3300026041 Bacteria 3345
151 Ga0207639_10051600 3300026041 Unclassified 3129
152 Ga0207639_10052193 3300026041 Bacteria 3115
153 Ga0207639_10102079 3300026041 Unclassified 2321
154 Ga0207641_10120190 3300026088 Unclassified 2343
155 Ga0207648_10068523 3300026089 Unclassified 3092
156 Ga0207648_10112402 3300026089 Bacteria 2392
157 Ga0207674_10010427 3300026116 Bacteria 10528
158 Ga0207683_10231263 3300026121 Unclassified 1686
159 Ga0207698_10106417 3300026142 Bacteria 2339
160 Ga0268266_10000070 3300028379 Bacteria 235423
161 Ga0268264_10000098 3300028381 Bacteria 229055
162 Ga0268264_10002849 3300028381 Bacteria 15081
163 Ga0268264_10015037 3300028381 Bacteria 6348
164 Ga0268264_10117423 3300028381 Bacteria 2340
165 Ga0307515_10141690 3300028794 Bacteria 2574
166 Ga0307511_10000304 3300030521 Bacteria 52160
167 Ga0265327_10000051 3300031251 Bacteria 257963
168 Ga0265327_10021146 3300031251 Bacteria 3935
169 Ga0265327_10074923 3300031251 Bacteria 1685
170 Ga0307516_10082955 3300031730 Bacteria 3047
171 Ga0307405_10000008 3300031731 Bacteria 264953
172 Ga0307407_10000056 3300031903 Bacteria 49331
173 Ga0307416_100000048 3300032002 Bacteria 120194
174 Ga0307414_10002073 3300032004 Bacteria 10416
175 Ga0439439_0011829 3300041406 Bacteria 2104
176 Ga0439457_000445 3300042014 Bacteria 11904
177 Ga0466972_0001012 3300044658 Bacteria 13484
178 Ga0466965_0024616 3300044683 Unclassified 2913
179 Ga0466965_0064432 3300044683 Bacteria 1835
180 Ga0466964_0134852 3300044706 Unclassified 1128
181 Ga0466970_0000370 3300044765 Bacteria 21830
182 Ga0466970_0036055 3300044765 Bacteria 2619
183 Ga0466957_0051443 3300044842 Bacteria 2508
184 Ga0466959_0006841 3300045049 Bacteria 7949
185 Ga0466958_0049695 3300045836 Bacteria 2538
186 Ga0495630_0133240 3300046517 Bacteria 1888
187 Ga0495648_0001718 3300046524 Bacteria 21140
188 Ga0495645_0161881 3300046543 Bacteria 1547
189 Ga0495611_0000150 3300046648 Bacteria 49672
190 Ga0495672_0044210 3300047320 Bacteria 2674
191 Ga0495687_000006 3300047443 Bacteria 571936
192 Ga0495684_0094421 3300047471 Bacteria 2265
193 Ga0495686_0000078 3300047472 Bacteria 203927
194 Ga0496100_0151570 3300048903 Bacteria 1654
195 Ga0496121_0000020 3300048924 Bacteria 498732
196 Ga0501034_0291644 3300049571 Bacteria 1569
197 Ga0501069_0025800 3300049585 Bacteria 3214
198 Ga0501083_0022490 3300049744 Bacteria 4374
199 nmdc:mga08y16_71885_c1 3300050511 Bacteria 3605
200 nmdc:mga0a205_302824_c1 3300050515 Bacteria 1471
201 Ga0500583_0095514 3300053092 Bacteria 1451
202 Ga0500658_0001169 3300053134 Bacteria 10690
203 Ga0500577_0002494 3300053142 Bacteria 4708
204 Ga0500616_0024746 3300053153 Bacteria 3333
205 Ga0500622_0000490 3300053156 Bacteria 37113
206 Ga0500622_0003767 3300053156 Bacteria 9903
207 Ga0500661_000946 3300055283 Bacteria 5439
208 Ga0466962_0009937 3300061719 Bacteria 4566
209 2819549023 2818991437 Bacteria 5805520
210 2819573775 2818991442 Bacteria 8318214
211 2821137111 2821136567 Bacteria 8080116
212 2842912774 2842909656 Bacteria 6185908
213 2852624023 2852623160 Bacteria 4376875
214 2884937054 2884933994 Bacteria 4535041
215 2896115046 2896109856 Bacteria 7140722
216 2904449096 2904445276 Bacteria 5310396
217 2904468147 2904467357 Bacteria 8057758
218 2929925618 2929921140 Bacteria 8649150
219 8003153411 8003151029 Bacteria 8187759
220 Ga0105248_10074348
221 JGI24740J21852_10002880
222 JGI24739J22299_10004407
223 JGI25154J39366_1000005
224 JGI25157J39369_1006134
225 JGI25406J46586_10002476
226 JGI25153J46596_10003493
227 rootH1_10182078
228 rootH2_10001414
229 rootH2_10014134
230 rootH1_10091449
231 Ga0055542_1002194
232 Ga0070658_10000049
233 Ga0070683_100106876
234 Ga0070683_100121086
235 Ga0070680_100007801
236 Ga0070682_100000890
237 Ga0070660_100018187
238 Ga0070660_100171609
239 Ga0070691_10000810
240 Ga0070691_10004512
241 Ga0070671_100005460
242 Ga0070659_100286283
243 Ga0070667_100023144
244 Ga0070663_100147312
245 Ga0070678_100176512
246 Ga0070681_10015715
247 Ga0068867_100090380
248 Ga0070684_100024989
249 Ga0068853_100003352
250 Ga0068853_100035169
251 Ga0068853_100043883
252 Ga0068853_100118717
253 Ga0068853_100407572
254 Ga0070693_100009121
255 Ga0070665_100000052
256 Ga0068855_100051208
257 Ga0068855_100051912
258 Ga0070664_100167003
259 Ga0068857_100011753
260 Ga0068854_100019250
261 Ga0068856_100001044
262 Ga0068852_100000133
263 Ga0068852_100068475
264 Ga0068852_100391592
265 Ga0068864_100133089
266 Ga0068863_100167671
267 Ga0068860_100002170
268 Ga0068860_100009323
269 Ga0068860_100014468
270 Ga0068860_100117207
271 Ga0081540_1013407
272 Ga0081539_10000037
273 Ga0097621_100000606
274 Ga0097621_100004447
275 Ga0097621_100018796
276 Ga0068871_100000334
277 Ga0068871_100022952
278 Ga0105240_10000063
279 Ga0105240_10000071
280 Ga0105240_10002411
281 Ga0105240_10006121
282 Ga0105240_10021884
283 Ga0105240_10430136
284 Ga0105243_10094454
285 Ga0105241_10020283
286 Ga0105241_10070233
287 Ga0105237_10001134
288 Ga0105237_10001747
289 Ga0105237_10005152
290 Ga0105237_10155047
291 Ga0105238_10019119
292 Ga0105238_10023921
293 Ga0105238_10310589
294 Ga0105249_10079088
295 Ga0105239_10000566
296 Ga0105239_10021449
297 Ga0105239_10044872
298 Ga0157373_10004906
299 Ga0157371_10127948
300 Ga0157370_10011288
301 Ga0157370_10078524
302 Ga0157370_10139238
303 Ga0157369_10026606
304 Ga0157369_10176614
305 Ga0157374_10000001
306 Ga0157374_10028776
307 Ga0157374_10226359
308 Ga0157378_10012618
309 Ga0157378_10265038
310 Ga0163162_10000166
311 Ga0163162_10000214
312 Ga0163162_10105643
313 Ga0163162_10202067
314 Ga0163162_10297621
315 Ga0157372_10007805
316 Ga0157375_10000125
317 Ga0163163_10172464
318 Ga0157379_10006414
319 Ga0157379_10037760
320 Ga0157376_10001900
321 Ga0157376_10002152
322 Ga0157376_10010589
323 Ga0157376_10076480
324 Ga0157376_10208570
325 Ga0182005_1000215
326 Ga0163161_10007816
327 Ga0163161_10018601
328 Ga0163161_10033839
329 Ga0163161_10097896
330 Ga0209258_100219
331 Ga0209646_1000017
332 Ga0209026_1000296
333 Ga0209148_1000283
334 Ga0209758_1006422
335 Ga0209758_1016031
336 Ga0207426_1000377
337 Ga0207426_1007805
338 Ga0207654_10002610
339 Ga0207707_10001244
340 Ga0207695_10000068
341 Ga0207695_10000133
342 Ga0207695_10022709
343 Ga0207695_10080003
344 Ga0207695_10092029
345 Ga0207695_10103850
346 Ga0207695_10215233
347 Ga0207671_10001716
348 Ga0207671_10003818
349 Ga0207671_10011692
350 Ga0207671_10018833
351 Ga0207657_10005606
352 Ga0207649_10187478
353 Ga0207694_10078554
354 Ga0207694_10098914
355 Ga0207694_10129501
356 Ga0207650_10107535
357 Ga0207644_10007168
358 Ga0207706_10005503
359 Ga0207704_10077800
360 Ga0207689_10004189
361 Ga0207689_10364960
362 Ga0207661_10342679
363 Ga0207667_10041989
364 Ga0207667_10097728
365 Ga0207667_10098013
366 Ga0207658_10076484
367 Ga0207639_10013299
368 Ga0207639_10044342
369 Ga0207639_10051600
370 Ga0207639_10052193
371 Ga0207639_10102079
372 Ga0207641_10120190
373 Ga0207648_10068523
374 Ga0207648_10112402
375 Ga0207674_10010427
376 Ga0207683_10231263
377 Ga0207698_10106417
378 Ga0268266_10000070
379 Ga0268264_10000098
380 Ga0268264_10002849
381 Ga0268264_10015037
382 Ga0268264_10117423
383 Ga0307515_10141690
384 Ga0307511_10000304
385 Ga0265327_10000051
386 Ga0265327_10021146
387 Ga0265327_10074923
388 Ga0307516_10082955
389 Ga0307405_10000008
390 Ga0307407_10000056
391 Ga0307416_100000048
392 Ga0307414_10002073
393 Ga0439439_0011829
394 Ga0439457_000445
395 Ga0466972_0001012
396 Ga0466965_0024616
397 Ga0466965_0064432
398 Ga0466964_0134852
399 Ga0466970_0000370
400 Ga0466970_0036055
401 Ga0466957_0051443
402 Ga0466959_0006841
403 Ga0466958_0049695
404 Ga0495630_0133240
405 Ga0495648_0001718
406 Ga0495645_0161881
407 Ga0495611_0000150
408 Ga0495672_0044210
409 Ga0495687_000006
410 Ga0495684_0094421
411 Ga0495686_0000078
412 Ga0496100_0151570
413 Ga0496121_0000020
414 Ga0501034_0291644
415 Ga0501069_0025800
416 Ga0501083_0022490
417 nmdc:mga08y16_71885_c1
418 nmdc:mga0a205_302824_c1
419 Ga0500583_0095514
420 Ga0500658_0001169
421 Ga0500577_0002494
422 Ga0500616_0024746
423 Ga0500622_0000490
424 Ga0500622_0003767
425 Ga0500661_000946
426 Ga0466962_0009937
427 2819549023
428 2819573775
429 2821137111
430 2842912774
431 2852624023
432 2884937054
433 2896115046
434 2904449096
435 2904468147
436 2929925618
437 8003153411

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

186

315

0.94

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

56

177

0.9

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

190

390

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
2glx-assembly1.cif.gz_A crystal structure analysis of bacterial 1,5-af reductase 0.8767 26 357
2glx-assembly1.cif.gz_A crystal structure analysis of bacterial 1,5-af reductase 0.8593 26 357
7bvk-assembly2.cif.gz_B udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p212121) 0.852 24 352
4koa-assembly1.cif.gz_A-2 crystal structure analysis of 1,5-anhydro-d-fructose reductase from sinorhizobium meliloti 0.8518 25 357
7bvj-assembly4.cif.gz_D udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p21) 0.8502 24 352
ID Description Score Start End Superfamily
1xeaB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8581 24 145 3.40.50.720
3ezyC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8571 25 145 3.40.50.720
5a02A02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.8563 153 358 3.30.360.10
1xeaB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8516 24 145 3.40.50.720
3ezyC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8506 25 145 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A353TGD5-F1-model_v4 Oxidoreductase 0.9826 21 287 GO:0000166
GO:0016491
AF-A0A7Y8LGW4-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9753 24 358 GO:0000166
GO:0016491
AF-A0A2V8X4D8-F1-model_v4 Oxidoreductase 0.9674 20 358 GO:0000166
GO:0016491
AF-A0A1Q8AQM2-F1-model_v4 Oxidoreductase 0.9636 24 358 GO:0000166
GO:0016491
AF-A0A6I7MY07-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9627 21 358 GO:0000166
GO:0016491

Map