F329925

General Info

Members Datasets Scaffolds Average Seq Length
218 128 215 462

Family's Representative Sequence

Representative Sequence 3300009551|Ga0105238_10024103|Ga0105238_100241032
Length 534
Sequence MNKKLMGFITYSIALLSRALFRFGQLLTSPQKYRCGSVVSFCKIFNGSVRGECHQKPLSKLRSLVYLPGMFSSGIKSVHFTGICGTAMASAAAAMKEKGFQVTGSDQSVYPPMSTFLASRQIEVINGYSDRNLAHKPDLVVIGNAISRGNPEAEYVLDHKLRYCSLPELLKEFFIRGKRSIVVAGTHGKTTTTSLLTWVFEHNGLNPSYLIGGIPNNLSQGARFTDSEWFIIEGDEYDTAFFDKRSKFIHYLPEIAIVNNLEFDHADIFENLDAIKKSFSHLIRLIPRNGLLLGNGDDANLAPLMNVTHCPVKKFGLGGDFAIYAFNIRYGPTATEFEIPSFKFHLNLVGELNVRNALAVIACAKHCGLSNKQIQAAFDTFKGIKRRMEIRGIAGGVTVIDDFGHHPTAIRETLRALRIKYPQQQLWAIFEPRSNTTRRNVFQEELAASFADADAVVVAEVARLEQLAAGDRLNPEKLMQDIKASGKPAAYLADVDAIIHHVTKNIQGGDVVCVFSNGGFGGIHGKLLERLGKR

Samples

Sample ID Description Type Environment
1 2831864461 Roseateles noduli HZ7 Isolate Nodule
2 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
5 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
21 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
39 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
40 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
52 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
53 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
54 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
55 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
56 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
57 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
60 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
61 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
62 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
63 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
64 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
65 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
66 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
67 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
70 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
71 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
72 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
73 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
74 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
75 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
76 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
77 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
78 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
79 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
80 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
81 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
82 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
83 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
84 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
86 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
87 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
91 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
96 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
97 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
98 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
99 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
100 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
101 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
102 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
103 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
104 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
105 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
106 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
107 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
108 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
109 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
110 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
111 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
112 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
113 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
114 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
115 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
119 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
120 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
123 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
124 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
125 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
126 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
127 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
128 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.62
Metatranscriptomes 0
Isolates 1.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.5
Nodule 0.46
Rhizoplane 0.92
Rhizosphere 92.2
Stem 0
Stem Tuber 0
Unclassified 0.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10049345 3300003322 Bacteria 12183
2 Ga0055526_1009771 3300003771 Bacteria 4561
3 Ga0055524_1000552 3300003775 Bacteria 28315
4 Ga0055531_10001408 3300003794 Bacteria 17758
5 Ga0065165_1000016 3300005262 Bacteria 286248
6 Ga0070690_100002212 3300005330 Bacteria 10413
7 Ga0070690_100015068 3300005330 Bacteria 4603
8 Ga0070689_100015553 3300005340 Bacteria 5551
9 Ga0070689_100045049 3300005340 Bacteria 3396
10 Ga0070689_100119593 3300005340 Bacteria 2103
11 Ga0070701_10001691 3300005438 Bacteria 8283
12 Ga0070694_100063607 3300005444 Bacteria 2523
13 Ga0070681_10023370 3300005458 Bacteria 6217
14 Ga0070681_10214940 3300005458 Bacteria 1839
15 Ga0070685_10007953 3300005466 Bacteria 5434
16 Ga0070698_100201561 3300005471 Bacteria 1925
17 Ga0070686_100003772 3300005544 Bacteria 8332
18 Ga0068855_100145018 3300005563 Bacteria 2704
19 Ga0068859_100025250 3300005617 Bacteria 5962
20 Ga0068864_100087697 3300005618 Bacteria 2740
21 Ga0068863_100016776 3300005841 Bacteria 7027
22 Ga0068863_100021583 3300005841 Bacteria 6141
23 Ga0075366_10016983 3300006195 Bacteria 4185
24 Ga0075370_10056912 3300006353 Bacteria 2222
25 Ga0075428_100019620 3300006844 Bacteria 7481
26 Ga0075428_100024194 3300006844 Bacteria 6718
27 Ga0075428_100032132 3300006844 Bacteria 5798
28 Ga0075431_100008923 3300006847 Bacteria 10048
29 Ga0075431_100054249 3300006847 Bacteria 4133
30 Ga0075433_10000387 3300006852 Bacteria 27925
31 Ga0075433_10004881 3300006852 Bacteria 10491
32 Ga0075434_100000111 3300006871 Bacteria 46866
33 Ga0075434_100023894 3300006871 Bacteria 5965
34 Ga0097620_100025250 3300006931 Bacteria 5962
35 Ga0105240_10088327 3300009093 Bacteria 3793
36 Ga0111539_10354877 3300009094 Bacteria 1706
37 Ga0105245_10056011 3300009098 Bacteria 3542
38 Ga0105242_10028977 3300009176 Bacteria 4411
39 Ga0105248_10054993 3300009177 Bacteria 4464
40 Ga0105238_10005205 3300009551 Bacteria 12854
41 Ga0105238_10024103 3300009551 Bacteria 6203
42 Ga0105238_10025849 3300009551 Bacteria 5985
43 Ga0105238_10035606 3300009551 Bacteria 5060
44 Ga0157319_1000015 3300012497 Bacteria 130857
45 Ga0157370_10111621 3300013104 Bacteria 2556
46 Ga0157375_10000006 3300013308 Bacteria 384086
47 Ga0163163_10000210 3300014325 Bacteria 60503
48 Ga0163163_10118406 3300014325 Bacteria 2681
49 Ga0209673_1004414 3300025273 Bacteria 7551
50 Ga0209564_1000008 3300025295 Bacteria 953227
51 Ga0209256_1000394 3300025299 Bacteria 69416
52 Ga0209257_1006029 3300025304 Bacteria 8096
53 Ga0207707_10086143 3300025912 Bacteria 2745
54 Ga0207707_10173661 3300025912 Bacteria 1883
55 Ga0207695_10025111 3300025913 Bacteria 6683
56 Ga0207695_10146340 3300025913 Bacteria 2306
57 Ga0207663_10002393 3300025916 Bacteria 9012
58 Ga0207694_10206135 3300025924 Bacteria 1601
59 Ga0207670_10000910 3300025936 Bacteria 15635
60 Ga0207670_10085278 3300025936 Bacteria 2219
61 Ga0207669_10178118 3300025937 Bacteria 1521
62 Ga0207667_10124512 3300025949 Bacteria 2655
63 Ga0207708_10086939 3300026075 Bacteria 2406
64 Ga0207702_10000274 3300026078 Bacteria 59342
65 Ga0207674_10014486 3300026116 Bacteria 8707
66 Ga0207674_10201569 3300026116 Bacteria 1939
67 Ga0265337_1001208 3300028556 Bacteria 13148
68 Ga0265337_1001578 3300028556 Bacteria 11130
69 Ga0265337_1007217 3300028556 Bacteria 4183
70 Ga0265326_10018109 3300028558 Bacteria 2028
71 Ga0265319_1000004 3300028563 Bacteria 305085
72 Ga0265318_10053723 3300028577 Bacteria 1510
73 Ga0265323_10000225 3300028653 Bacteria 33236
74 Ga0265322_10009841 3300028654 Bacteria 2773
75 Ga0265336_10001551 3300028666 Bacteria 10305
76 Ga0265336_10007141 3300028666 Bacteria 3989
77 Ga0265338_10000070 3300028800 Bacteria 185904
78 Ga0265338_10000129 3300028800 Bacteria 138608
79 Ga0265338_10001063 3300028800 Bacteria 45630
80 Ga0265338_10001410 3300028800 Bacteria 39134
81 Ga0265338_10001418 3300028800 Bacteria 39001
82 Ga0265338_10001539 3300028800 Bacteria 37247
83 Ga0265338_10001689 3300028800 Bacteria 35059
84 Ga0265338_10001696 3300028800 Bacteria 34994
85 Ga0265338_10001712 3300028800 Bacteria 34790
86 Ga0265338_10002374 3300028800 Bacteria 28399
87 Ga0265338_10006028 3300028800 Bacteria 15573
88 Ga0265338_10008405 3300028800 Bacteria 12538
89 Ga0265338_10019453 3300028800 Bacteria 7203
90 Ga0265338_10027019 3300028800 Bacteria 5770
91 Ga0265338_10029903 3300028800 Bacteria 5387
92 Ga0265338_10059394 3300028800 Bacteria 3369
93 Ga0265338_10068456 3300028800 Bacteria 3058
94 Ga0265324_10000410 3300029957 Bacteria 30845
95 Ga0265324_10000546 3300029957 Bacteria 25761
96 Ga0265324_10010896 3300029957 Bacteria 3485
97 Ga0265324_10041476 3300029957 Bacteria 1592
98 Ga0265324_10042348 3300029957 Bacteria 1574
99 Ga0265332_10049205 3300031238 Bacteria 1813
100 Ga0265320_10001037 3300031240 Bacteria 20637
101 Ga0265320_10003034 3300031240 Bacteria 11402
102 Ga0265320_10007939 3300031240 Bacteria 6546
103 Ga0265320_10015846 3300031240 Bacteria 4246
104 Ga0265320_10025974 3300031240 Bacteria 3072
105 Ga0265320_10063728 3300031240 Bacteria 1753
106 Ga0265325_10003806 3300031241 Bacteria 9730
107 Ga0265325_10034932 3300031241 Bacteria 2672
108 Ga0265329_10000487 3300031242 Bacteria 20650
109 Ga0265340_10001962 3300031247 Bacteria 11749
110 Ga0265340_10051228 3300031247 Bacteria 2000
111 Ga0265339_10007863 3300031249 Bacteria 6842
112 Ga0265331_10018279 3300031250 Bacteria 3641
113 Ga0265327_10000215 3300031251 Bacteria 119243
114 Ga0265327_10006300 3300031251 Bacteria 9547
115 Ga0265327_10022317 3300031251 Bacteria 3789
116 Ga0265316_10001214 3300031344 Bacteria 27769
117 Ga0265316_10005887 3300031344 Bacteria 11816
118 Ga0265316_10011194 3300031344 Bacteria 8113
119 Ga0265316_10037657 3300031344 Bacteria 3902
120 Ga0265316_10093423 3300031344 Bacteria 2292
121 Ga0265316_10098851 3300031344 Bacteria 2220
122 Ga0265316_10141714 3300031344 Bacteria 1805
123 Ga0265313_10001250 3300031595 Bacteria 24196
124 Ga0265313_10003525 3300031595 Bacteria 12620
125 Ga0265314_10000172 3300031711 Bacteria 96486
126 Ga0265342_10011137 3300031712 Bacteria 6173
127 Ga0265342_10049541 3300031712 Bacteria 2513
128 Ga0307405_10021963 3300031731 Bacteria 3599
129 Ga0307406_10053142 3300031901 Bacteria 2580
130 Ga0316583_10001121 3300032133 Bacteria 8738
131 Ga0373944_0000155 3300035089 Bacteria 13498
132 Ga0373951_0002913 3300035091 Bacteria 4254
133 Ga0373932_0000001 3300035112 Bacteria 1459067
134 Ga0373956_0009635 3300035119 Bacteria 3933
135 Ga0373931_0000008 3300035691 Bacteria 362269
136 Ga0373935_0007429 3300035692 Bacteria 6559
137 Ga0373927_0002505 3300035695 Bacteria 13406
138 Ga0373927_0023363 3300035695 Bacteria 4049
139 Ga0373947_0005284 3300035725 Bacteria 7550
140 Ga0373947_0126766 3300035725 Bacteria 1626
141 Ga0316582_0124757 3300036647 Bacteria 1726
142 Ga0373925_0000907 3300037068 Bacteria 27030
143 Ga0373925_0005278 3300037068 Bacteria 9647
144 Ga0373925_0009768 3300037068 Bacteria 6968
145 Ga0373925_0142066 3300037068 Bacteria 1880
146 Ga0395900_0099048 3300037418 Bacteria 2995
147 Ga0395898_0032840 3300037466 Bacteria 5182
148 Ga0439435_0013351 3300042436 Bacteria 2007
149 Ga0451577_0000302 3300042876 Bacteria 95860
150 Ga0451577_0006375 3300042876 Bacteria 11782
151 Ga0451577_0010879 3300042876 Bacteria 8646
152 Ga0451577_0012381 3300042876 Bacteria 8011
153 Ga0466969_0000013 3300044656 Bacteria 111537
154 Ga0466966_0033743 3300044684 Bacteria 3312
155 Ga0453684_0004761 3300044712 Bacteria 28012
156 Ga0453684_0055654 3300044712 Bacteria 5142
157 Ga0453684_0099294 3300044712 Bacteria 3566
158 Ga0451576_0003357 3300045051 Bacteria 22176
159 Ga0451576_0026812 3300045051 Bacteria 6192
160 Ga0451576_0051107 3300045051 Bacteria 4334
161 Ga0451576_0162970 3300045051 Bacteria 2327
162 Ga0495641_0026976 3300046461 Bacteria 2797
163 Ga0495651_0031865 3300046462 Bacteria 4111
164 Ga0495618_0001621 3300046514 Bacteria 15042
165 Ga0495628_0000030 3300046516 Bacteria 120546
166 Ga0495630_0002526 3300046517 Bacteria 12691
167 Ga0495630_0015272 3300046517 Bacteria 5604
168 Ga0495630_0086540 3300046517 Bacteria 2367
169 Ga0495666_0039694 3300046526 Bacteria 2284
170 Ga0495640_0018212 3300046533 Bacteria 5216
171 Ga0495586_0000064 3300046535 Bacteria 65287
172 Ga0495586_0000468 3300046535 Bacteria 24169
173 Ga0495586_0001243 3300046535 Bacteria 14299
174 Ga0495586_0002913 3300046535 Bacteria 9234
175 Ga0495645_0002862 3300046543 Bacteria 11712
176 Ga0495645_0026796 3300046543 Bacteria 4186
177 Ga0495622_0007734 3300046557 Bacteria 4991
178 Ga0495634_0010798 3300046642 Bacteria 6680
179 Ga0495634_0052978 3300046642 Bacteria 2719
180 Ga0495599_0004191 3300046678 Bacteria 8513
181 Ga0495599_0012563 3300046678 Bacteria 5223
182 Ga0495599_0040762 3300046678 Bacteria 2916
183 Ga0495658_0084868 3300046683 Bacteria 1865
184 Ga0495613_0002463 3300046689 Bacteria 13952
185 Ga0495674_0000496 3300047319 Bacteria 35977
186 Ga0495674_0006762 3300047319 Bacteria 10979
187 Ga0495674_0030025 3300047319 Bacteria 4945
188 Ga0495676_0034504 3300047321 Bacteria 4245
189 Ga0495676_0067642 3300047321 Bacteria 2763
190 Ga0495676_0161831 3300047321 Bacteria 1583
191 Ga0495680_0011051 3300047322 Bacteria 8020
192 Ga0495684_0059777 3300047471 Bacteria 2902
193 Ga0495684_0081838 3300047471 Bacteria 2450
194 Ga0496107_0094136 3300048910 Bacteria 2192
195 Ga0496115_0011510 3300048918 Bacteria 6634
196 Ga0496124_0020278 3300048927 Bacteria 6150
197 Ga0495682_0043733 3300049460 Bacteria 1640
198 Ga0501031_0000631 3300049568 Bacteria 20805
199 Ga0501032_0002706 3300049569 Bacteria 13828
200 Ga0501033_0003368 3300049570 Bacteria 13186
201 Ga0501033_0014615 3300049570 Bacteria 5962
202 Ga0501080_0008989 3300049742 Bacteria 9090
203 Ga0501083_0031138 3300049744 Bacteria 3661
204 Ga0501035_0055553 3300049822 Bacteria 3535
205 Ga0501044_0000442 3300049823 Bacteria 50741
206 nmdc:mga07m45_3801_c1 3300050496 Bacteria 7308
207 nmdc:mga05p37_80005_c1 3300050507 Bacteria 2836
208 nmdc:mga06r32_144749_c1 3300050510 Bacteria 2354
209 nmdc:mga06r32_27563_c1 3300050510 Bacteria 5309
210 nmdc:mga08y16_160003_c1 3300050511 Bacteria 2339
211 nmdc:mga08y16_283922_c1 3300050511 Bacteria 1707
212 nmdc:mga0n895_3789_c1 3300050512 Bacteria 12244
213 nmdc:mga0a205_1530_c1 3300050515 Bacteria 19762
214 nmdc:mga0a205_71060_c1 3300050515 Bacteria 3362
215 Ga0500650_0008024 3300053098 Bacteria 4151

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050507 nmdc:mga05p37_80005_c1 nmdc:mga05p37_80005_c1_10_1296 389
2 3300037418 Ga0395900_0099048 Ga0395900_0099048_153_1541 390
3 3300037466 Ga0395898_0032840 Ga0395898_0032840_3553_4941 390
4 3300005466 Ga0070685_10007953 Ga0070685_100079532 400
5 3300028556 Ga0265337_1001578 Ga0265337_10015783 406
6 3300050510 nmdc:mga06r32_27563_c1 nmdc:mga06r32_27563_c1_995_2338 407
7 3300005340 Ga0070689_100119593 Ga0070689_1001195932 408
8 3300005438 Ga0070701_10001691 Ga0070701_100016914 408
9 3300005444 Ga0070694_100063607 Ga0070694_1000636071 408
10 3300005458 Ga0070681_10023370 Ga0070681_100233702 408
11 3300005458 Ga0070681_10214940 Ga0070681_102149402 408
12 3300005544 Ga0070686_100003772 Ga0070686_1000037729 408
13 3300005563 Ga0068855_100145018 Ga0068855_1001450182 408
14 3300009176 Ga0105242_10028977 Ga0105242_100289773 408
15 3300009551 Ga0105238_10005205 Ga0105238_100052052 408
16 3300025912 Ga0207707_10086143 Ga0207707_100861432 408
17 3300025913 Ga0207695_10025111 Ga0207695_100251115 408
18 3300025949 Ga0207667_10124512 Ga0207667_101245122 408
19 3300028800 Ga0265338_10001539 Ga0265338_100015394 408
20 3300028800 Ga0265338_10027019 Ga0265338_100270193 408
21 3300031242 Ga0265329_10000487 Ga0265329_1000048711 408
22 3300031251 Ga0265327_10006300 Ga0265327_100063006 408
23 3300031344 Ga0265316_10098851 Ga0265316_100988512 408
24 3300036647 Ga0316582_0124757 Ga0316582_0124757_36_1379 408
25 3300037068 Ga0373925_0009768 Ga0373925_0009768_5064_6407 408
26 3300049460 Ga0495682_0043733 Ga0495682_0043733_54_1397 408
27 3300025937 Ga0207669_10178118 Ga0207669_101781181 409
28 3300031731 Ga0307405_10021963 Ga0307405_100219633 409
29 3300031901 Ga0307406_10053142 Ga0307406_100531422 409
30 3300046461 Ga0495641_0026976 Ga0495641_0026976_994_2430 409
31 3300046517 Ga0495630_0086540 Ga0495630_0086540_909_2345 409
32 3300046535 Ga0495586_0002913 Ga0495586_0002913_130_1566 409
33 3300046642 Ga0495634_0052978 Ga0495634_0052978_675_2111 409
34 3300046683 Ga0495658_0084868 Ga0495658_0084868_293_1729 409
35 3300047321 Ga0495676_0067642 Ga0495676_0067642_640_2076 409
36 3300048910 Ga0496107_0094136 Ga0496107_0094136_177_1529 409
37 3300031344 Ga0265316_10005887 Ga0265316_100058874 411
38 3300031344 Ga0265316_10141714 Ga0265316_101417141 413
39 3300031712 Ga0265342_10049541 Ga0265342_100495411 413
40 3300042876 Ga0451577_0006375 Ga0451577_0006375_9575_10987 413
41 3300046689 Ga0495613_0002463 Ga0495613_0002463_9367_10803 413
42 3300006852 Ga0075433_10004881 Ga0075433_100048816 414
43 3300009094 Ga0111539_10354877 Ga0111539_103548771 414
44 3300028577 Ga0265318_10053723 Ga0265318_100537231 414
45 3300028800 Ga0265338_10008405 Ga0265338_100084052 414
46 3300031247 Ga0265340_10051228 Ga0265340_100512282 414
47 3300031249 Ga0265339_10007863 Ga0265339_100078635 414
48 3300031344 Ga0265316_10011194 Ga0265316_100111945 414
49 3300031595 Ga0265313_10001250 Ga0265313_1000125021 414
50 3300031712 Ga0265342_10011137 Ga0265342_100111375 414
51 3300050511 nmdc:mga08y16_160003_c1 nmdc:mga08y16_160003_c1_716_2311 415
52 3300006847 Ga0075431_100008923 Ga0075431_1000089236 419
53 3300028800 Ga0265338_10059394 Ga0265338_100593943 419
54 3300005330 Ga0070690_100015068 Ga0070690_1000150682 420
55 3300005340 Ga0070689_100015553 Ga0070689_1000155533 420
56 3300005340 Ga0070689_100045049 Ga0070689_1000450493 420
57 3300005617 Ga0068859_100025250 Ga0068859_1000252502 420
58 3300005618 Ga0068864_100087697 Ga0068864_1000876972 420
59 3300005841 Ga0068863_100016776 Ga0068863_1000167765 420
60 3300005841 Ga0068863_100021583 Ga0068863_1000215834 420
61 3300006844 Ga0075428_100019620 Ga0075428_1000196203 420
62 3300006931 Ga0097620_100025250 Ga0097620_1000252502 420
63 3300009093 Ga0105240_10088327 Ga0105240_100883272 420
64 3300009098 Ga0105245_10056011 Ga0105245_100560112 420
65 3300009177 Ga0105248_10054993 Ga0105248_100549932 420
66 3300009551 Ga0105238_10024103 Ga0105238_100241032 420
67 3300009551 Ga0105238_10025849 Ga0105238_100258492 420
68 3300009551 Ga0105238_10035606 Ga0105238_100356064 420
69 3300013308 Ga0157375_10000006 Ga0157375_10000006282 420
70 3300014325 Ga0163163_10118406 Ga0163163_101184062 420
71 3300025912 Ga0207707_10173661 Ga0207707_101736612 420
72 3300025913 Ga0207695_10146340 Ga0207695_101463402 420
73 3300025916 Ga0207663_10002393 Ga0207663_100023933 420
74 3300025936 Ga0207670_10000910 Ga0207670_100009102 420
75 3300025936 Ga0207670_10085278 Ga0207670_100852782 420
76 3300026116 Ga0207674_10014486 Ga0207674_100144866 420
77 3300028556 Ga0265337_1001208 Ga0265337_10012086 420
78 3300028556 Ga0265337_1007217 Ga0265337_10072173 420
79 3300028558 Ga0265326_10018109 Ga0265326_100181091 420
80 3300028563 Ga0265319_1000004 Ga0265319_1000004189 420
81 3300028653 Ga0265323_10000225 Ga0265323_1000022522 420
82 3300028654 Ga0265322_10009841 Ga0265322_100098412 420
83 3300028666 Ga0265336_10001551 Ga0265336_100015516 420
84 3300028666 Ga0265336_10007141 Ga0265336_100071413 420
85 3300028800 Ga0265338_10000070 Ga0265338_1000007051 420
86 3300028800 Ga0265338_10000129 Ga0265338_1000012989 420
87 3300028800 Ga0265338_10001063 Ga0265338_1000106329 420
88 3300028800 Ga0265338_10001410 Ga0265338_1000141022 420
89 3300028800 Ga0265338_10001689 Ga0265338_100016896 420
90 3300028800 Ga0265338_10001696 Ga0265338_1000169611 420
91 3300028800 Ga0265338_10001712 Ga0265338_1000171221 420
92 3300028800 Ga0265338_10002374 Ga0265338_100023748 420
93 3300028800 Ga0265338_10006028 Ga0265338_1000602810 420
94 3300028800 Ga0265338_10019453 Ga0265338_100194532 420
95 3300028800 Ga0265338_10029903 Ga0265338_100299034 420
96 3300028800 Ga0265338_10068456 Ga0265338_100684562 420
97 3300029957 Ga0265324_10000410 Ga0265324_1000041033 420
98 3300029957 Ga0265324_10000546 Ga0265324_100005467 420
99 3300029957 Ga0265324_10010896 Ga0265324_100108962 420
100 3300029957 Ga0265324_10041476 Ga0265324_100414761 420
101 3300029957 Ga0265324_10042348 Ga0265324_100423481 420
102 3300031238 Ga0265332_10049205 Ga0265332_100492052 420
103 3300031240 Ga0265320_10001037 Ga0265320_1000103720 420
104 3300031240 Ga0265320_10003034 Ga0265320_1000303412 420
105 3300031240 Ga0265320_10007939 Ga0265320_100079392 420
106 3300031240 Ga0265320_10015846 Ga0265320_100158463 420
107 3300031240 Ga0265320_10025974 Ga0265320_100259742 420
108 3300031240 Ga0265320_10063728 Ga0265320_100637282 420
109 3300031241 Ga0265325_10034932 Ga0265325_100349322 420
110 3300031247 Ga0265340_10001962 Ga0265340_100019628 420
111 3300031250 Ga0265331_10018279 Ga0265331_100182793 420
112 3300031251 Ga0265327_10000215 Ga0265327_1000021527 420
113 3300031251 Ga0265327_10022317 Ga0265327_100223171 420
114 3300031344 Ga0265316_10001214 Ga0265316_100012148 420
115 3300031344 Ga0265316_10037657 Ga0265316_100376572 420
116 3300031595 Ga0265313_10003525 Ga0265313_100035256 420
117 3300031711 Ga0265314_10000172 Ga0265314_1000017232 420
118 3300035089 Ga0373944_0000155 Ga0373944_0000155_3659_5056 420
119 3300035091 Ga0373951_0002913 Ga0373951_0002913_636_2033 420
120 3300035112 Ga0373932_0000001 Ga0373932_0000001_808071_809468 420
121 3300035119 Ga0373956_0009635 Ga0373956_0009635_2512_3909 420
122 3300035691 Ga0373931_0000008 Ga0373931_0000008_274646_276043 420
123 3300035692 Ga0373935_0007429 Ga0373935_0007429_1778_3184 420
124 3300035695 Ga0373927_0002505 Ga0373927_0002505_8712_10109 420
125 3300035695 Ga0373927_0023363 Ga0373927_0023363_2415_3821 420
126 3300035725 Ga0373947_0005284 Ga0373947_0005284_3964_5361 420
127 3300035725 Ga0373947_0126766 Ga0373947_0126766_178_1584 420
128 3300037068 Ga0373925_0000907 Ga0373925_0000907_20804_22201 420
129 3300037068 Ga0373925_0005278 Ga0373925_0005278_357_1763 420
130 3300042876 Ga0451577_0000302 Ga0451577_0000302_26192_27586 420
131 3300044712 Ga0453684_0004761 Ga0453684_0004761_4276_5682 420
132 3300044712 Ga0453684_0055654 Ga0453684_0055654_1005_2402 420
133 3300045051 Ga0451576_0003357 Ga0451576_0003357_17868_19274 420
134 3300045051 Ga0451576_0026812 Ga0451576_0026812_3304_4707 420
135 3300045051 Ga0451576_0051107 Ga0451576_0051107_1695_3089 420
136 3300045051 Ga0451576_0162970 Ga0451576_0162970_741_2135 420
137 3300046462 Ga0495651_0031865 Ga0495651_0031865_2142_3539 420
138 3300046517 Ga0495630_0002526 Ga0495630_0002526_4892_6286 420
139 3300046517 Ga0495630_0015272 Ga0495630_0015272_1972_3378 420
140 3300046526 Ga0495666_0039694 Ga0495666_0039694_313_1719 420
141 3300046535 Ga0495586_0000064 Ga0495586_0000064_24866_26260 420
142 3300046535 Ga0495586_0001243 Ga0495586_0001243_3520_4917 420
143 3300046543 Ga0495645_0026796 Ga0495645_0026796_1681_3075 420
144 3300046557 Ga0495622_0007734 Ga0495622_0007734_2348_3739 420
145 3300046642 Ga0495634_0010798 Ga0495634_0010798_5019_6413 420
146 3300046678 Ga0495599_0004191 Ga0495599_0004191_710_2116 420
147 3300046678 Ga0495599_0040762 Ga0495599_0040762_1445_2851 420
148 3300047319 Ga0495674_0000496 Ga0495674_0000496_32876_34270 420
149 3300047319 Ga0495674_0006762 Ga0495674_0006762_8603_10009 420
150 3300047321 Ga0495676_0034504 Ga0495676_0034504_58_1452 420
151 3300047321 Ga0495676_0161831 Ga0495676_0161831_159_1565 420
152 3300047322 Ga0495680_0011051 Ga0495680_0011051_2564_3961 420
153 3300047471 Ga0495684_0059777 Ga0495684_0059777_318_1712 420
154 3300047471 Ga0495684_0081838 Ga0495684_0081838_710_2116 420
155 3300048918 Ga0496115_0011510 Ga0496115_0011510_5138_6532 420
156 3300049568 Ga0501031_0000631 Ga0501031_0000631_1269_2666 420
157 3300049569 Ga0501032_0002706 Ga0501032_0002706_3348_4745 420
158 3300049570 Ga0501033_0003368 Ga0501033_0003368_1369_2766 420
159 3300049822 Ga0501035_0055553 Ga0501035_0055553_1640_3037 420
160 3300049823 Ga0501044_0000442 Ga0501044_0000442_31484_32881 420
161 3300050511 nmdc:mga08y16_283922_c1 nmdc:mga08y16_283922_c1_168_1562 420
162 3300053098 Ga0500650_0008024 Ga0500650_0008024_1616_3013 420
163 3300006844 Ga0075428_100032132 Ga0075428_1000321322 421
164 3300014325 Ga0163163_10000210 Ga0163163_100002103 421
165 3300025924 Ga0207694_10206135 Ga0207694_102061351 421
166 3300026078 Ga0207702_10000274 Ga0207702_1000027411 421
167 3300026116 Ga0207674_10201569 Ga0207674_102015691 421
168 3300028800 Ga0265338_10001418 Ga0265338_1000141816 421
169 3300042876 Ga0451577_0010879 Ga0451577_0010879_870_2273 421
170 3300042876 Ga0451577_0012381 Ga0451577_0012381_5002_6399 421
171 3300044712 Ga0453684_0099294 Ga0453684_0099294_1014_2420 421
172 3300046514 Ga0495618_0001621 Ga0495618_0001621_13608_15011 421
173 3300046516 Ga0495628_0000030 Ga0495628_0000030_2039_3553 421
174 3300046533 Ga0495640_0018212 Ga0495640_0018212_995_2509 421
175 3300046535 Ga0495586_0000468 Ga0495586_0000468_22437_23951 421
176 3300046543 Ga0495645_0002862 Ga0495645_0002862_7885_9399 421
177 3300046678 Ga0495599_0012563 Ga0495599_0012563_3178_4692 421
178 3300047319 Ga0495674_0030025 Ga0495674_0030025_2459_3973 421
179 3300049570 Ga0501033_0014615 Ga0501033_0014615_2531_3928 421
180 3300049744 Ga0501083_0031138 Ga0501083_0031138_1057_2457 421
181 iso_pu_bacteria 2831864461 2831869431 421
182 iso_pu_bacteria 2886848708 2886849752 421
183 iso_pu_bacteria 2886848708 2886854705 421
184 3300013104 Ga0157370_10111621 Ga0157370_101116212 423
185 3300003771 Ga0055526_1009771 Ga0055526_10097713 425
186 3300003775 Ga0055524_1000552 Ga0055524_100055222 425
187 3300003794 Ga0055531_10001408 Ga0055531_100014088 425
188 3300005262 Ga0065165_1000016 Ga0065165_1000016202 425
189 3300006195 Ga0075366_10016983 Ga0075366_100169833 425
190 3300006353 Ga0075370_10056912 Ga0075370_100569122 425
191 3300012497 Ga0157319_1000015 Ga0157319_100001580 425
192 3300025273 Ga0209673_1004414 Ga0209673_10044144 425
193 3300025295 Ga0209564_1000008 Ga0209564_1000008341 425
194 3300025299 Ga0209256_1000394 Ga0209256_100039428 425
195 3300025304 Ga0209257_1006029 Ga0209257_10060293 425
196 3300048927 Ga0496124_0020278 Ga0496124_0020278_1330_2694 425
197 3300050496 nmdc:mga07m45_3801_c1 nmdc:mga07m45_3801_c1_5556_6920 425
198 3300005330 Ga0070690_100002212 Ga0070690_1000022125 426
199 3300005471 Ga0070698_100201561 Ga0070698_1002015612 426
200 3300006844 Ga0075428_100024194 Ga0075428_1000241944 426
201 3300006852 Ga0075433_10000387 Ga0075433_1000038710 426
202 3300006871 Ga0075434_100000111 Ga0075434_10000011137 426
203 3300006871 Ga0075434_100023894 Ga0075434_1000238945 426
204 3300026075 Ga0207708_10086939 Ga0207708_100869392 426
205 3300042436 Ga0439435_0013351 Ga0439435_0013351_284_1651 426
206 3300044656 Ga0466969_0000013 Ga0466969_0000013_97494_98879 426
207 3300044684 Ga0466966_0033743 Ga0466966_0033743_32_1417 426
208 3300050512 nmdc:mga0n895_3789_c1 nmdc:mga0n895_3789_c1_4738_6135 426
209 3300050515 nmdc:mga0a205_1530_c1 nmdc:mga0a205_1530_c1_3034_4431 426
210 3300050515 nmdc:mga0a205_71060_c1 nmdc:mga0a205_71060_c1_392_1789 426
211 3300006847 Ga0075431_100054249 Ga0075431_1000542492 427
212 3300031241 Ga0265325_10003806 Ga0265325_1000380611 427
213 3300031344 Ga0265316_10093423 Ga0265316_100934232 427
214 3300032133 Ga0316583_10001121 Ga0316583_100011212 427
215 3300037068 Ga0373925_0142066 Ga0373925_0142066_227_1570 427
216 3300049742 Ga0501080_0008989 Ga0501080_0008989_211_1554 427
217 3300050510 nmdc:mga06r32_144749_c1 nmdc:mga06r32_144749_c1_447_1883 427
218 3300003322 rootL2_10049345 rootL2_100493454 436

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01225

Mur_ligase

Mur ligase family, catalytic domain

77

178

0.97

PF08245

Mur_ligase_M

Mur ligase middle domain

183

364

0.91

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

386

518

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3mvn-assembly1.cif.gz_A crystal structure of a domain from a putative udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl-medo-diaminopimelate ligase from haemophilus ducreyi 35000hp 0.9659 300 434
3mvn-assembly1.cif.gz_A crystal structure of a domain from a putative udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl-medo-diaminopimelate ligase from haemophilus ducreyi 35000hp 0.9582 300 434
2c5a-assembly1.cif.gz_B gdp-mannose-3', 5' -epimerase (arabidopsis thaliana),y174f, with gdp-beta-l-galactose bound in the active site 0.9304 1 33
2c59-assembly1.cif.gz_B gdp-mannose-3', 5' -epimerase (arabidopsis thaliana), with gdp-alpha-d-mannose and gdp-beta-l-galactose bound in the active site. 0.9296 1 33
2c5e-assembly1.cif.gz_B gdp-mannose-3', 5' -epimerase (arabidopsis thaliana), k217a, with gdp-alpha-d-mannose bound in the active site. 0.9251 1 33
ID Description Score Start End Superfamily
3mvnA00 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.965 300 434 3.90.190.20
3mvnA00 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9573 300 434 3.90.190.20
af_P37773_314_451_3.90.190.20 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9531 300 435 3.90.190.20
af_P37773_314_451_3.90.190.20 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9331 300 435 3.90.190.20
3hn7A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9247 1 81 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2X5SN44-F1-model_v4 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) 0.9745 1 83 GO:0009058
GO:0016881
AF-A0A855HIA3-F1-model_v4 deleted 0.9667 1 84
AF-A0A7V6ED13-F1-model_v4 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.9651 2 83 GO:0009058
GO:0016020
GO:0016881
AF-A0A3C0GYS5-F1-model_v4 deleted 0.9646 1 74
AF-A0A3C0YAX7-F1-model_v4 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.9591 342 435 GO:0009058
GO:0016881

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