F330769

General Info

Members Datasets Scaffolds Average Seq Length
219 115 438 326

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100150336|Ga0070714_1001503362
Length 367
Sequence MIHPIPSGTRDVLPEETREVRAITDTLRSVFEHHGYGEVYTPALEYESVLARADMAEAQPAYRVFDESGAVLVLRSDMTVPIARVVATRYGSSEPPLRFCYFAHCYRGVRPQRGQPRELLQAGIELIGSPAPGGTAEALTVLCHALDAVGLKDYRIGLGDASLFPALMSSLQVREPARAGLLEALVQRDFVGLEHRLAETGLSDEAAEVLLDVPQRRGGPELLSDPPAPAVEPVTGMRRVLELLEPAVAERVIFDFGLVRNIGYYTGAVFDVYDPALGAPIGGGGRYDELLGRFGRKLPAVGFALGVDRLHMALAGEERGTGALLARDGASASDGAPAARPLSGSDPRSEQLPPRSGTGAAARESSR

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
4 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
12 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
13 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
14 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
15 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
16 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
17 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
19 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
20 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
21 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
22 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
23 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
24 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
42 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
43 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
44 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
45 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
46 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
47 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
48 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
49 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
50 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
51 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
52 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
53 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
54 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
57 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
58 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
59 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
60 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
61 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
62 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
63 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
64 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
65 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
66 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
67 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
68 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
69 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
70 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
71 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
72 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
73 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
74 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
77 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
78 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
79 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
80 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
81 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
82 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
83 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
84 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
85 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
86 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
87 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
88 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
89 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
90 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
91 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
92 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
93 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
94 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
95 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
96 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
97 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
98 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
99 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
100 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
101 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
102 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
103 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
104 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
105 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
106 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
107 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
108 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
109 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
110 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
111 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
112 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
113 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
114 3300059655 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 152R_CD_T3_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
115 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.09
Metatranscriptomes 0.91
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.85
Rhizosphere 79.45
Stem 0
Stem Tuber 0
Unclassified 1.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100150336 3300005435 Bacteria 2098
2 Ga0070668_100218546 3300005347 Bacteria 1570
3 Ga0070669_100126029 3300005353 Bacteria 1959
4 Ga0070674_100145251 3300005356 Bacteria 1785
5 Ga0070709_10100793 3300005434 Bacteria 1924
6 Ga0070714_100010038 3300005435 Bacteria 7470
7 Ga0070714_100071624 3300005435 Bacteria 2998
8 Ga0070714_100082049 3300005435 Bacteria 2808
9 Ga0070713_100285032 3300005436 Bacteria 1516
10 Ga0070713_100331946 3300005436 Bacteria 1407
11 Ga0070710_10005494 3300005437 Bacteria 6023
12 Ga0070711_100001237 3300005439 Bacteria 13806
13 Ga0070711_100017870 3300005439 Bacteria 4520
14 Ga0070685_10120996 3300005466 Bacteria 1625
15 Ga0070665_100003693 3300005548 Bacteria 16210
16 Ga0070664_100294211 3300005564 Bacteria 1466
17 Ga0070702_100069636 3300005615 Bacteria 2074
18 Ga0081539_10002111 3300005985 Bacteria 29448
19 Ga0070717_10007369 3300006028 Bacteria 8170
20 Ga0070717_10010026 3300006028 Bacteria 7131
21 Ga0070717_10036330 3300006028 Bacteria 3995
22 Ga0070717_10107599 3300006028 Bacteria 2375
23 Ga0070712_100029331 3300006175 Bacteria 3687
24 Ga0070712_100034750 3300006175 Bacteria 3418
25 Ga0070712_100193535 3300006175 Bacteria 1593
26 Ga0070712_100350802 3300006175 Bacteria 1208
27 Ga0105240_10088670 3300009093 Bacteria 3785
28 Ga0111539_10258384 3300009094 Bacteria 2028
29 Ga0105237_10009091 3300009545 Bacteria 10677
30 Ga0206353_11031355 3300020082 Bacteria 1444
31 Ga0213873_10011257 3300021358 Bacteria 1909
32 Ga0213873_10023191 3300021358 Bacteria 1477
33 Ga0213874_10001436 3300021377 Bacteria 4936
34 Ga0213876_10011762 3300021384 Bacteria 4668
35 Ga0213876_10021238 3300021384 Bacteria 3433
36 Ga0213875_10051115 3300021388 Bacteria 1936
37 Ga0213875_10085088 3300021388 Bacteria 1475
38 Ga0207692_10001597 3300025898 Bacteria 8540
39 Ga0207692_10173022 3300025898 Bacteria 1253
40 Ga0207699_10068103 3300025906 Bacteria 2167
41 Ga0207699_10139750 3300025906 Bacteria 1591
42 Ga0207695_10066627 3300025913 Bacteria 3697
43 Ga0207671_10001526 3300025914 Bacteria 26567
44 Ga0207693_10001908 3300025915 Bacteria 18240
45 Ga0207693_10004599 3300025915 Bacteria 11642
46 Ga0207693_10067275 3300025915 Bacteria 2805
47 Ga0207693_10095893 3300025915 Bacteria 2325
48 Ga0207663_10002190 3300025916 Bacteria 9339
49 Ga0207663_10011429 3300025916 Bacteria 4767
50 Ga0207646_10206516 3300025922 Bacteria 1774
51 Ga0207681_10253142 3300025923 Bacteria 1376
52 Ga0207700_10078545 3300025928 Bacteria 2568
53 Ga0207664_10018015 3300025929 Bacteria 5188
54 Ga0207664_10062843 3300025929 Bacteria 2966
55 Ga0207664_10101883 3300025929 Bacteria 2373
56 Ga0207664_10111513 3300025929 Bacteria 2276
57 Ga0207664_10186195 3300025929 Bacteria 1785
58 Ga0207664_10216695 3300025929 Bacteria 1658
59 Ga0207690_10170402 3300025932 Bacteria 1631
60 Ga0207669_10233683 3300025937 Bacteria 1358
61 Ga0207665_10043388 3300025939 Bacteria 3007
62 Ga0207708_10034730 3300026075 Bacteria 3836
63 Ga0207675_100033107 3300026118 Bacteria 4816
64 Ga0207675_100349554 3300026118 Bacteria 1449
65 Ga0268266_10029050 3300028379 Bacteria 4699
66 Ga0268264_10405817 3300028381 Bacteria 1311
67 Ga0265326_10007695 3300028558 Bacteria 3289
68 Ga0265319_1000353 3300028563 Bacteria 33333
69 Ga0265319_1000917 3300028563 Bacteria 18532
70 Ga0265319_1011374 3300028563 Bacteria 3647
71 Ga0265318_10001586 3300028577 Bacteria 13166
72 Ga0265318_10005786 3300028577 Bacteria 5769
73 Ga0265322_10025281 3300028654 Bacteria 1698
74 Ga0265336_10000005 3300028666 Bacteria 399349
75 Ga0265338_10000001 3300028800 Bacteria 1177449
76 Ga0265338_10055262 3300028800 Bacteria 3533
77 Ga0265324_10005314 3300029957 Bacteria 5589
78 Ga0265320_10008105 3300031240 Bacteria 6458
79 Ga0265340_10000001 3300031247 Bacteria 1647668
80 Ga0265327_10010800 3300031251 Bacteria 6369
81 Ga0265316_10024867 3300031344 Bacteria 5005
82 Ga0307410_10425015 3300031852 Bacteria 1079
83 Ga0307407_10042890 3300031903 Bacteria 2540
84 Ga0307409_100045553 3300031995 Bacteria 3312
85 Ga0307409_100487737 3300031995 Bacteria 1197
86 Ga0307416_100010792 3300032002 Bacteria 6053
87 Ga0307416_100588629 3300032002 Bacteria 1191
88 Ga0307415_100233153 3300032126 Bacteria 1484
89 Ga0373953_0026271 3300035117 Bacteria 2230
90 Ga0395900_0009968 3300037418 Bacteria 9726
91 Ga0436364_0141287 3300037853 Bacteria 2248
92 Ga0436364_0260630 3300037853 Bacteria 18389
93 Ga0436364_0784998 3300037853 Bacteria 9739
94 Ga0436364_0880558 3300037853 Bacteria 3587
95 Ga0436364_0922110 3300037853 Bacteria 5002
96 Ga0436364_0930394 3300037853 Bacteria 22678
97 Ga0436364_0964361 3300037853 Bacteria 5899
98 Ga0436364_1090129 3300037853 Bacteria 2227
99 Ga0436364_1343636 3300037853 Bacteria 1317
100 Ga0436364_1448200 3300037853 Bacteria 4322
101 Ga0436364_1450573 3300037853 Bacteria 2436
102 Ga0436365_0304994 3300039437 Bacteria 5810
103 Ga0436365_0576278 3300039437 Bacteria 2310
104 Ga0436365_0605282 3300039437 Bacteria 6095
105 Ga0436365_0673848 3300039437 Bacteria 3624
106 Ga0436365_0887741 3300039437 Bacteria 34339
107 Ga0436365_0910503 3300039437 Bacteria 2576
108 Ga0436365_0931977 3300039437 Bacteria 1249
109 Ga0436365_1133939 3300039437 Bacteria 4275
110 Ga0436365_1681994 3300039437 Bacteria 5002
111 Ga0436365_1702970 3300039437 Bacteria 5677
112 Ga0436360_0290405 3300039438 Bacteria 1993
113 Ga0436361_0459849 3300039447 Bacteria 4177
114 Ga0436363_0061345 3300039450 Bacteria 2194
115 Ga0436363_0530695 3300039450 Bacteria 8499
116 Ga0436363_1301125 3300039450 Bacteria 33245
117 Ga0436362_0138817 3300039453 Bacteria 2054
118 Ga0436362_0195527 3300039453 Bacteria 3077
119 Ga0436362_0196751 3300039453 Bacteria 3207
120 Ga0436362_0402922 3300039453 Bacteria 2074
121 Ga0436362_0472666 3300039453 Bacteria 1732
122 Ga0436362_0684661 3300039453 Bacteria 1165
123 Ga0436362_1130989 3300039453 Bacteria 1264
124 Ga0466969_0023066 3300044656 Bacteria 3209
125 Ga0466969_0049332 3300044656 Bacteria 2078
126 Ga0466965_0040569 3300044683 Bacteria 2292
127 Ga0466966_0075999 3300044684 Bacteria 2098
128 Ga0466966_0120013 3300044684 Bacteria 1616
129 Ga0466961_0044553 3300044693 Bacteria 2839
130 Ga0466961_0078375 3300044693 Bacteria 2093
131 Ga0466961_0140805 3300044693 Bacteria 1510
132 Ga0466961_0151504 3300044693 Bacteria 1448
133 Ga0466963_0010569 3300044694 Bacteria 5593
134 Ga0466963_0016615 3300044694 Bacteria 4578
135 Ga0466963_0068646 3300044694 Bacteria 2381
136 Ga0466963_0183261 3300044694 Bacteria 1462
137 Ga0466968_0031300 3300044735 Bacteria 2207
138 Ga0466968_0061605 3300044735 Bacteria 1619
139 Ga0466968_0078283 3300044735 Unclassified 1449
140 Ga0466970_0034152 3300044765 Bacteria 2691
141 Ga0466970_0137900 3300044765 Bacteria 1343
142 Ga0466957_0005022 3300044842 Bacteria 7408
143 Ga0466957_0012437 3300044842 Bacteria 4926
144 Ga0466957_0031751 3300044842 Bacteria 3158
145 Ga0466957_0073580 3300044842 Bacteria 2118
146 Ga0466959_0003996 3300045049 Bacteria 9801
147 Ga0466959_0011946 3300045049 Bacteria 6261
148 Ga0466959_0013010 3300045049 Bacteria 6025
149 Ga0466959_0014287 3300045049 Bacteria 5763
150 Ga0466959_0023331 3300045049 Bacteria 4578
151 Ga0466959_0029413 3300045049 Bacteria 4070
152 Ga0466959_0030517 3300045049 Bacteria 3991
153 Ga0466959_0128699 3300045049 Bacteria 1795
154 Ga0466959_0186905 3300045049 Bacteria 1447
155 Ga0466958_0003618 3300045836 Bacteria 8057
156 Ga0466958_0008259 3300045836 Bacteria 5764
157 Ga0466958_0043663 3300045836 Bacteria 2700
158 Ga0466958_0043838 3300045836 Bacteria 2695
159 Ga0466958_0046451 3300045836 Bacteria 2620
160 Ga0466958_0096103 3300045836 Bacteria 1837
161 Ga0466958_0213884 3300045836 Bacteria 1229
162 Ga0466967_0022485 3300045976 Bacteria 5146
163 Ga0466967_0061211 3300045976 Bacteria 3339
164 Ga0495592_0075973 3300046454 Bacteria 2438
165 Ga0495651_0051616 3300046462 Bacteria 3169
166 Ga0495653_0000179 3300046463 Bacteria 52301
167 Ga0495653_0031119 3300046463 Bacteria 4243
168 Ga0495664_0000012 3300046477 Bacteria 226118
169 Ga0495664_0031377 3300046477 Bacteria 3115
170 Ga0495608_0040105 3300046511 Bacteria 3137
171 Ga0495618_0000352 3300046514 Bacteria 32977
172 Ga0495628_0063703 3300046516 Bacteria 2888
173 Ga0495630_0011902 3300046517 Bacteria 6307
174 Ga0495630_0156614 3300046517 Bacteria 1734
175 Ga0495645_0000012 3300046543 Bacteria 209044
176 Ga0495645_0000387 3300046543 Bacteria 30480
177 Ga0495667_0042808 3300046559 Bacteria 3002
178 Ga0495667_0083301 3300046559 Bacteria 2077
179 Ga0495634_0036834 3300046642 Bacteria 3344
180 Ga0495634_0196794 3300046642 Bacteria 1254
181 Ga0495635_0078548 3300046663 Bacteria 2259
182 Ga0495657_0000007 3300046675 Bacteria 222471
183 Ga0495657_0102613 3300046675 Bacteria 1820
184 Ga0495599_0050574 3300046678 Bacteria 2604
185 Ga0495623_0080572 3300046679 Bacteria 2015
186 Ga0495600_0016527 3300046809 Bacteria 4685
187 Ga0495600_0018890 3300046809 Bacteria 4398
188 Ga0495604_0000691 3300047317 Bacteria 28622
189 Ga0495674_0048420 3300047319 Bacteria 3761
190 Ga0495680_0122927 3300047322 Bacteria 1914
191 Ga0495675_0100480 3300047444 Bacteria 1811
192 Ga0495684_0020304 3300047471 Bacteria 5119
193 Ga0495684_0138018 3300047471 Bacteria 1829
194 Ga0495602_0102354 3300048088 Bacteria 2347
195 Ga0496102_0000027 3300048905 Bacteria 225466
196 Ga0496103_0001348 3300048906 Bacteria 16570
197 Ga0496104_0000026 3300048907 Bacteria 210098
198 Ga0496104_0265119 3300048907 Bacteria 1630
199 Ga0496104_0581652 3300048907 Unclassified 1030
200 Ga0496105_0423211 3300048908 Unclassified 1054
201 Ga0496108_0099228 3300048911 Bacteria 2482
202 Ga0496110_0000716 3300048913 Bacteria 22903
203 Ga0496111_0000366 3300048914 Bacteria 22446
204 Ga0496112_0165643 3300048915 Bacteria 2176
205 Ga0496113_0026133 3300048916 Bacteria 4171
206 Ga0496114_0075518 3300048917 Bacteria 2839
207 Ga0496115_0000035 3300048918 Bacteria 134475
208 Ga0496115_0000143 3300048918 Bacteria 65909
209 Ga0496115_0318568 3300048918 Unclassified 1272
210 Ga0496122_0056455 3300048925 Bacteria 2927
211 Ga0495601_0005015 3300053077 Bacteria 7684
212 Ga0495601_0265159 3300053077 Bacteria 1121
213 Ga0495612_0000023 3300053078 Bacteria 118413
214 Ga0495595_0025764 3300053084 Bacteria 2608
215 Ga0495619_0025890 3300053085 Bacteria 3771
216 Ga0495619_0201814 3300053085 Bacteria 1377
217 Ga0587114_000393 3300059655 Bacteria 2832
218 Ga0466962_0010642 3300061719 Bacteria 4425
219 Ga0466962_0010883 3300061719 Bacteria 4375
220 Ga0070714_100150336
221 Ga0070668_100218546
222 Ga0070669_100126029
223 Ga0070674_100145251
224 Ga0070709_10100793
225 Ga0070714_100010038
226 Ga0070714_100071624
227 Ga0070714_100082049
228 Ga0070713_100285032
229 Ga0070713_100331946
230 Ga0070710_10005494
231 Ga0070711_100001237
232 Ga0070711_100017870
233 Ga0070685_10120996
234 Ga0070665_100003693
235 Ga0070664_100294211
236 Ga0070702_100069636
237 Ga0081539_10002111
238 Ga0070717_10007369
239 Ga0070717_10010026
240 Ga0070717_10036330
241 Ga0070717_10107599
242 Ga0070712_100029331
243 Ga0070712_100034750
244 Ga0070712_100193535
245 Ga0070712_100350802
246 Ga0105240_10088670
247 Ga0111539_10258384
248 Ga0105237_10009091
249 Ga0206353_11031355
250 Ga0213873_10011257
251 Ga0213873_10023191
252 Ga0213874_10001436
253 Ga0213876_10011762
254 Ga0213876_10021238
255 Ga0213875_10051115
256 Ga0213875_10085088
257 Ga0207692_10001597
258 Ga0207692_10173022
259 Ga0207699_10068103
260 Ga0207699_10139750
261 Ga0207695_10066627
262 Ga0207671_10001526
263 Ga0207693_10001908
264 Ga0207693_10004599
265 Ga0207693_10067275
266 Ga0207693_10095893
267 Ga0207663_10002190
268 Ga0207663_10011429
269 Ga0207646_10206516
270 Ga0207681_10253142
271 Ga0207700_10078545
272 Ga0207664_10018015
273 Ga0207664_10062843
274 Ga0207664_10101883
275 Ga0207664_10111513
276 Ga0207664_10186195
277 Ga0207664_10216695
278 Ga0207690_10170402
279 Ga0207669_10233683
280 Ga0207665_10043388
281 Ga0207708_10034730
282 Ga0207675_100033107
283 Ga0207675_100349554
284 Ga0268266_10029050
285 Ga0268264_10405817
286 Ga0265326_10007695
287 Ga0265319_1000353
288 Ga0265319_1000917
289 Ga0265319_1011374
290 Ga0265318_10001586
291 Ga0265318_10005786
292 Ga0265322_10025281
293 Ga0265336_10000005
294 Ga0265338_10000001
295 Ga0265338_10055262
296 Ga0265324_10005314
297 Ga0265320_10008105
298 Ga0265340_10000001
299 Ga0265327_10010800
300 Ga0265316_10024867
301 Ga0307410_10425015
302 Ga0307407_10042890
303 Ga0307409_100045553
304 Ga0307409_100487737
305 Ga0307416_100010792
306 Ga0307416_100588629
307 Ga0307415_100233153
308 Ga0373953_0026271
309 Ga0395900_0009968
310 Ga0436364_0141287
311 Ga0436364_0260630
312 Ga0436364_0784998
313 Ga0436364_0880558
314 Ga0436364_0922110
315 Ga0436364_0930394
316 Ga0436364_0964361
317 Ga0436364_1090129
318 Ga0436364_1343636
319 Ga0436364_1448200
320 Ga0436364_1450573
321 Ga0436365_0304994
322 Ga0436365_0576278
323 Ga0436365_0605282
324 Ga0436365_0673848
325 Ga0436365_0887741
326 Ga0436365_0910503
327 Ga0436365_0931977
328 Ga0436365_1133939
329 Ga0436365_1681994
330 Ga0436365_1702970
331 Ga0436360_0290405
332 Ga0436361_0459849
333 Ga0436363_0061345
334 Ga0436363_0530695
335 Ga0436363_1301125
336 Ga0436362_0138817
337 Ga0436362_0195527
338 Ga0436362_0196751
339 Ga0436362_0402922
340 Ga0436362_0472666
341 Ga0436362_0684661
342 Ga0436362_1130989
343 Ga0466969_0023066
344 Ga0466969_0049332
345 Ga0466965_0040569
346 Ga0466966_0075999
347 Ga0466966_0120013
348 Ga0466961_0044553
349 Ga0466961_0078375
350 Ga0466961_0140805
351 Ga0466961_0151504
352 Ga0466963_0010569
353 Ga0466963_0016615
354 Ga0466963_0068646
355 Ga0466963_0183261
356 Ga0466968_0031300
357 Ga0466968_0061605
358 Ga0466968_0078283
359 Ga0466970_0034152
360 Ga0466970_0137900
361 Ga0466957_0005022
362 Ga0466957_0012437
363 Ga0466957_0031751
364 Ga0466957_0073580
365 Ga0466959_0003996
366 Ga0466959_0011946
367 Ga0466959_0013010
368 Ga0466959_0014287
369 Ga0466959_0023331
370 Ga0466959_0029413
371 Ga0466959_0030517
372 Ga0466959_0128699
373 Ga0466959_0186905
374 Ga0466958_0003618
375 Ga0466958_0008259
376 Ga0466958_0043663
377 Ga0466958_0043838
378 Ga0466958_0046451
379 Ga0466958_0096103
380 Ga0466958_0213884
381 Ga0466967_0022485
382 Ga0466967_0061211
383 Ga0495592_0075973
384 Ga0495651_0051616
385 Ga0495653_0000179
386 Ga0495653_0031119
387 Ga0495664_0000012
388 Ga0495664_0031377
389 Ga0495608_0040105
390 Ga0495618_0000352
391 Ga0495628_0063703
392 Ga0495630_0011902
393 Ga0495630_0156614
394 Ga0495645_0000012
395 Ga0495645_0000387
396 Ga0495667_0042808
397 Ga0495667_0083301
398 Ga0495634_0036834
399 Ga0495634_0196794
400 Ga0495635_0078548
401 Ga0495657_0000007
402 Ga0495657_0102613
403 Ga0495599_0050574
404 Ga0495623_0080572
405 Ga0495600_0016527
406 Ga0495600_0018890
407 Ga0495604_0000691
408 Ga0495674_0048420
409 Ga0495680_0122927
410 Ga0495675_0100480
411 Ga0495684_0020304
412 Ga0495684_0138018
413 Ga0495602_0102354
414 Ga0496102_0000027
415 Ga0496103_0001348
416 Ga0496104_0000026
417 Ga0496104_0265119
418 Ga0496104_0581652
419 Ga0496105_0423211
420 Ga0496108_0099228
421 Ga0496110_0000716
422 Ga0496111_0000366
423 Ga0496112_0165643
424 Ga0496113_0026133
425 Ga0496114_0075518
426 Ga0496115_0000035
427 Ga0496115_0000143
428 Ga0496115_0318568
429 Ga0496122_0056455
430 Ga0495601_0005015
431 Ga0495601_0265159
432 Ga0495612_0000023
433 Ga0495595_0025764
434 Ga0495619_0025890
435 Ga0495619_0201814
436 Ga0587114_000393
437 Ga0466962_0010642
438 Ga0466962_0010883

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13393

tRNA-synt_His

Histidyl-tRNA synthetase

8

310

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vqx-assembly1.cif.gz_A crystal structure of the catalytic domain of pyrrolysyl-trna synthetase in triclinic crystal form 0.8468 20 289
6ezd-assembly1.cif.gz_C pyrrolysyl-trna synthetase from canditatus methanomethylophilus alvus (mmapylrs) 0.8422 19 285
8dqj-assembly1.cif.gz_A crystal structure of pyrrolysyl-trna synthetase from methanomethylophilus alvus engineered for acridone amino acid (ast) bound to atp and acridone 0.8415 20 285
8dqh-assembly1.cif.gz_D crystal structure of pyrrolysyl-trna synthetase from methanomethylophilus alvus engineered for acridone amino acid (rs1) bound to atp and acridone after 24 hours of crystal growth 0.8336 20 285
8dqj-assembly1.cif.gz_D crystal structure of pyrrolysyl-trna synthetase from methanomethylophilus alvus engineered for acridone amino acid (ast) bound to atp and acridone 0.8335 20 285
ID Description Score Start End Superfamily
3dsqB02 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.8522 20 291 3.30.930.10
af_P39965_7_270_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.841 13 162 3.30.930.10
af_Q2G1Z4_2_243_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.8391 13 160 3.30.930.10
af_Q58508_361_548_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.8149 20 281 3.30.930.10
3vqxB02 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.8099 19 290 3.30.930.10
ID Description Score Start End GO Terms
AF-X1ULB9-F1-model_v4 Aminoacyl-transfer RNA synthetases class-II family profile domain-containing protein 0.8859 24 143 GO:0004821
GO:0005737
GO:0006427
AF-A0A4Q3XD11-F1-model_v4 deleted 0.8786 1 151
AF-A0A7J3J136-F1-model_v4 Histidine--tRNA ligase 0.8746 8 144 GO:0004821
GO:0005737
GO:0006427
GO:0016757
AF-A0A3A5WKV8-F1-model_v4 Histidine--tRNA ligase 0.8712 18 175 GO:0004821
GO:0005737
GO:0006427
AF-A0A350CDU5-F1-model_v4 Histidine--tRNA ligase 0.8692 18 173 GO:0016874

Map