F333324

General Info

Members Datasets Scaffolds Average Seq Length
221 120 221 487

Family's Representative Sequence

Representative Sequence 3300009101|Ga0105247_10000144|Ga0105247_1000014410
Length 513
Sequence MIGSLRTAERTRGGLMNVEKSGTGRGAPAAEVNTSLVIGLTFVATLGGLLFGYDTAVISGAVTSIDAYFIDPLGLSETARSSLSGWTISSALLGCIIGAMVAGWVSTALGRRGGLMVAGLMFLLGSVGSAWPEFGFGPIGHMGPDALRPFIAYRILGGVGVGIASMLSPLYIAEISPSAIRGRLVSFNQLAIVGGILLVYFVNWFVASQGDDAWVKSTGWRYMLASEAIPSAILLILLMFVPDTPRWLVLRGRSPEALTQLRRLMSERDAREILADIERTMVRTSHKLLTFGLPVILIGIMISVFQQFVGINAVLYYAPLMFQNMGASTDTALLQTVVVGGANVIFTVIAIVTVDKWGRKPLLVTGAIIMAVAMIALGCLFNAKIVGLAALVAVVVYIAGFALSWGPVAWVMLSEMFPNAIKGKAMGIAVAAQWIANLLVSASFKVLDGNSVLNALFNHGFAYWIYGGMSVLAALFVLRYVPETKGRSLEAIQDLWGKPATAGATVAPSHPHS

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
34 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
50 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
51 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
52 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
79 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
80 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
81 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
84 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
85 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
86 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
87 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
88 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
89 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
90 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
91 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
94 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
95 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
96 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
97 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
98 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
99 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
100 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
101 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
102 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
103 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
104 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
105 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
106 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
107 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
108 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
109 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
110 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
113 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
114 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
115 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
116 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
117 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
118 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
119 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
120 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.43
Nodule 0.45
Rhizoplane 3.17
Rhizosphere 80.54
Stem 0
Stem Tuber 0
Unclassified 10.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10002145 3300003203 Bacteria 9333
2 rootH1_10158072 3300003316 Bacteria 5015
3 rootL2_10122543 3300003322 Bacteria 3042
4 rootH1_10260041 3300003323 Bacteria 2299
5 Ga0070683_100023610 3300005329 Bacteria 5501
6 Ga0070670_100000001 3300005331 Bacteria 728788
7 Ga0070666_10008325 3300005335 Bacteria 6433
8 Ga0070680_100033690 3300005336 Bacteria 4130
9 Ga0070671_100000033 3300005355 Bacteria 105788
10 Ga0070671_100002336 3300005355 Bacteria 14646
11 Ga0070688_100009558 3300005365 Bacteria 5311
12 Ga0070667_100000405 3300005367 Bacteria 46253
13 Ga0070667_100005074 3300005367 Bacteria 11020
14 Ga0070681_10000259 3300005458 Bacteria 42095
15 Ga0070681_10011301 3300005458 Bacteria 8833
16 Ga0070681_10017016 3300005458 Bacteria 7266
17 Ga0070681_10022541 3300005458 Bacteria 6324
18 Ga0070681_10056239 3300005458 Bacteria 3916
19 Ga0070685_10000008 3300005466 Bacteria 166350
20 Ga0070679_100049648 3300005530 Bacteria 4179
21 Ga0070679_100060148 3300005530 Bacteria 3786
22 Ga0070679_100133564 3300005530 Bacteria 2463
23 Ga0070679_100151619 3300005530 Bacteria 2294
24 Ga0070679_100190071 3300005530 Bacteria 2023
25 Ga0070684_100025841 3300005535 Bacteria 4940
26 Ga0068853_100132390 3300005539 Bacteria 2234
27 Ga0070665_100001667 3300005548 Bacteria 25600
28 Ga0070665_100020832 3300005548 Bacteria 6589
29 Ga0070665_100029021 3300005548 Bacteria 5569
30 Ga0070665_100052264 3300005548 Bacteria 4099
31 Ga0070665_100110157 3300005548 Bacteria 2756
32 Ga0068855_100002914 3300005563 Bacteria 20938
33 Ga0068855_100003682 3300005563 Bacteria 18753
34 Ga0068855_100031086 3300005563 Bacteria 6379
35 Ga0070664_100214315 3300005564 Bacteria 1721
36 Ga0068854_100118386 3300005578 Bacteria 2007
37 Ga0068856_100090877 3300005614 Bacteria 3037
38 Ga0068859_100002382 3300005617 Bacteria 19151
39 Ga0068859_100009285 3300005617 Bacteria 9929
40 Ga0068859_100028974 3300005617 Bacteria 5555
41 Ga0068864_100000006 3300005618 Bacteria 393838
42 Ga0068864_100068175 3300005618 Bacteria 3090
43 Ga0068863_100022403 3300005841 Bacteria 6032
44 Ga0068858_100000100 3300005842 Bacteria 89377
45 Ga0068858_100002900 3300005842 Bacteria 17248
46 Ga0068858_100102595 3300005842 Bacteria 2668
47 Ga0068860_100000259 3300005843 Bacteria 77665
48 Ga0068860_100001209 3300005843 Bacteria 28185
49 Ga0068860_100008241 3300005843 Bacteria 10373
50 Ga0068862_100009806 3300005844 Bacteria 7914
51 Ga0068862_100020852 3300005844 Bacteria 5474
52 Ga0081455_10000311 3300005937 Bacteria 63941
53 Ga0081539_10000016 3300005985 Bacteria 381648
54 Ga0068871_100025673 3300006358 Bacteria 4587
55 Ga0075430_100079097 3300006846 Bacteria 2756
56 Ga0097620_100002382 3300006931 Bacteria 19151
57 Ga0097620_100009285 3300006931 Bacteria 9929
58 Ga0097620_100028976 3300006931 Bacteria 5555
59 Ga0099826_10103735 3300006948 Bacteria 1709
60 Ga0099794_10029344 3300007265 Unclassified 2562
61 Ga0105240_10000871 3300009093 Bacteria 54379
62 Ga0105240_10007684 3300009093 Bacteria 15607
63 Ga0105240_10018944 3300009093 Bacteria 9217
64 Ga0105240_10027563 3300009093 Bacteria 7436
65 Ga0105240_10033027 3300009093 Bacteria 6690
66 Ga0105240_10083641 3300009093 Bacteria 3915
67 Ga0105240_10141964 3300009093 Bacteria 2870
68 Ga0105240_10154392 3300009093 Bacteria 2732
69 Ga0105247_10000144 3300009101 Bacteria 69830
70 Ga0105247_10004976 3300009101 Bacteria 8445
71 Ga0105247_10032190 3300009101 Bacteria 3186
72 Ga0105248_10009482 3300009177 Bacteria 10714
73 Ga0105248_10053314 3300009177 Bacteria 4538
74 Ga0105248_10219892 3300009177 Bacteria 2138
75 Ga0105237_10009708 3300009545 Bacteria 10297
76 Ga0105237_10092165 3300009545 Bacteria 3020
77 Ga0105238_10010656 3300009551 Bacteria 9233
78 Ga0105238_10015767 3300009551 Bacteria 7650
79 Ga0105238_10191815 3300009551 Bacteria 2019
80 Ga0105249_10013533 3300009553 Bacteria 7206
81 Ga0105249_10032855 3300009553 Bacteria 4696
82 Ga0105249_10048419 3300009553 Bacteria 3875
83 Ga0099796_10000040 3300010159 Bacteria 26327
84 Ga0105239_10019553 3300010375 Bacteria 7476
85 Ga0105239_10021859 3300010375 Bacteria 7052
86 Ga0157370_10043920 3300013104 Bacteria 4299
87 Ga0157369_10018936 3300013105 Bacteria 7713
88 Ga0157369_10276176 3300013105 Unclassified 1750
89 Ga0163162_10057708 3300013306 Bacteria 3910
90 Ga0157372_10112224 3300013307 Bacteria 3123
91 Ga0163163_10000926 3300014325 Bacteria 24867
92 Ga0163163_10022463 3300014325 Bacteria 5974
93 Ga0163163_10102095 3300014325 Bacteria 2891
94 Ga0157379_10003083 3300014968 Bacteria 14093
95 Ga0157379_10046525 3300014968 Bacteria 3869
96 Ga0157379_10075705 3300014968 Bacteria 3014
97 Ga0183365_10005 3300015684 Bacteria 249619
98 Ga0213872_10001635 3300021361 Bacteria 14188
99 Ga0213872_10003311 3300021361 Bacteria 8982
100 Ga0213872_10003946 3300021361 Bacteria 8027
101 Ga0213872_10018820 3300021361 Bacteria 3182
102 Ga0209233_1006184 3300025261 Bacteria 3878
103 Ga0207710_10000269 3300025900 Bacteria 42868
104 Ga0207710_10004386 3300025900 Bacteria 6163
105 Ga0207680_10030171 3300025903 Bacteria 3055
106 Ga0207707_10000465 3300025912 Bacteria 42077
107 Ga0207707_10003562 3300025912 Bacteria 13798
108 Ga0207707_10003676 3300025912 Bacteria 13603
109 Ga0207695_10016415 3300025913 Bacteria 8663
110 Ga0207695_10029010 3300025913 Bacteria 6123
111 Ga0207695_10061253 3300025913 Bacteria 3890
112 Ga0207695_10128521 3300025913 Bacteria 2493
113 Ga0207660_10009347 3300025917 Bacteria 6343
114 Ga0207660_10013090 3300025917 Bacteria 5432
115 Ga0207660_10018321 3300025917 Bacteria 4664
116 Ga0207652_10028435 3300025921 Bacteria 4664
117 Ga0207652_10102234 3300025921 Bacteria 2532
118 Ga0207652_10105848 3300025921 Bacteria 2489
119 Ga0207694_10028436 3300025924 Bacteria 4262
120 Ga0207650_10000002 3300025925 Bacteria 1439222
121 Ga0207644_10009775 3300025931 Bacteria 6306
122 Ga0207711_10000366 3300025941 Bacteria 47938
123 Ga0207711_10069041 3300025941 Bacteria 3062
124 Ga0207661_10020908 3300025944 Bacteria 4900
125 Ga0207667_10004623 3300025949 Bacteria 16891
126 Ga0207667_10005093 3300025949 Bacteria 16050
127 Ga0207712_10063538 3300025961 Bacteria 2628
128 Ga0207712_10143407 3300025961 Bacteria 1836
129 Ga0207658_10000001 3300025986 Bacteria 1439333
130 Ga0207658_10003925 3300025986 Bacteria 10452
131 Ga0207658_10211840 3300025986 Bacteria 1624
132 Ga0207703_10000916 3300026035 Bacteria 28723
133 Ga0207703_10018562 3300026035 Bacteria 5430
134 Ga0207639_10028151 3300026041 Bacteria 4101
135 Ga0207702_10123753 3300026078 Bacteria 2318
136 Ga0207641_10000222 3300026088 Bacteria 73444
137 Ga0207641_10000236 3300026088 Bacteria 71435
138 Ga0207641_10092298 3300026088 Bacteria 2651
139 Ga0207641_10147068 3300026088 Unclassified 2131
140 Ga0207676_10000001 3300026095 Bacteria 1439222
141 Ga0207676_10178732 3300026095 Bacteria 1856
142 Ga0207674_10109912 3300026116 Bacteria 2732
143 Ga0207675_100008837 3300026118 Bacteria 9453
144 Ga0207698_10143060 3300026142 Bacteria 2064
145 Ga0209179_1000018 3300027512 Bacteria 46139
146 Ga0268266_10000706 3300028379 Bacteria 45120
147 Ga0268266_10000783 3300028379 Bacteria 42459
148 Ga0268266_10000868 3300028379 Bacteria 39325
149 Ga0268266_10003126 3300028379 Bacteria 16846
150 Ga0268266_10014764 3300028379 Bacteria 6709
151 Ga0268266_10019311 3300028379 Bacteria 5806
152 Ga0268266_10084675 3300028379 Bacteria 2769
153 Ga0268265_10005134 3300028380 Bacteria 8966
154 Ga0268265_10013850 3300028380 Bacteria 5489
155 Ga0268264_10000004 3300028381 Bacteria 1116842
156 Ga0268264_10000145 3300028381 Bacteria 167262
157 Ga0307515_10135569 3300028794 Bacteria 2680
158 Ga0307511_10000013 3300030521 Bacteria 127687
159 Ga0307511_10006300 3300030521 Bacteria 11968
160 Ga0307509_10000002 3300031507 Bacteria 607551
161 Ga0307509_10128576 3300031507 Bacteria 2494
162 Ga0265314_10014491 3300031711 Bacteria 6303
163 Ga0307409_100253774 3300031995 Bacteria 1609
164 Ga0307411_10176280 3300032005 Bacteria 1618
165 Ga0307510_10000007 3300033180 Bacteria 558582
166 Ga0307510_10094705 3300033180 Bacteria 2810
167 Ga0436365_1700104 3300039437 Bacteria 2606
168 Ga0436361_0114864 3300039447 Bacteria 33465
169 Ga0436361_0222166 3300039447 Bacteria 1308
170 Ga0436361_0410424 3300039447 Bacteria 15407
171 Ga0436361_0478490 3300039447 Bacteria 50328
172 Ga0436361_0514157 3300039447 Bacteria 5025
173 Ga0436361_0769203 3300039447 Bacteria 5000
174 Ga0436361_1185031 3300039447 Bacteria 18849
175 Ga0451791_1603702 3300041451 Bacteria 5465
176 Ga0439449_0041536 3300042007 Bacteria 1710
177 Ga0466972_0027547 3300044658 Bacteria 2811
178 Ga0466964_0003801 3300044706 Bacteria 5537
179 Ga0466968_0023509 3300044735 Bacteria 2512
180 Ga0466957_0020500 3300044842 Bacteria 3890
181 Ga0466959_0006054 3300045049 Bacteria 8349
182 Ga0466959_0010204 3300045049 Bacteria 6707
183 Ga0466959_0088326 3300045049 Bacteria 2229
184 Ga0466958_0010179 3300045836 Bacteria 5259
185 Ga0495616_0001352 3300046513 Bacteria 17110
186 Ga0495625_0020751 3300046660 Bacteria 5065
187 Ga0495659_0049188 3300046664 Bacteria 1530
188 Ga0495613_0000404 3300046689 Bacteria 37030
189 Ga0496102_0002316 3300048905 Bacteria 16258
190 Ga0496102_0092714 3300048905 Bacteria 2798
191 Ga0496110_0210153 3300048913 Bacteria 1769
192 Ga0496112_0066072 3300048915 Bacteria 3569
193 Ga0496112_0086734 3300048915 Bacteria 3097
194 Ga0496115_0090291 3300048918 Bacteria 2503
195 Ga0496116_0001945 3300048919 Bacteria 22259
196 Ga0496117_0000038 3300048920 Bacteria 322781
197 Ga0496118_0000019 3300048921 Bacteria 489649
198 Ga0496118_0028444 3300048921 Bacteria 4706
199 Ga0496120_0003097 3300048923 Bacteria 15647
200 Ga0496121_0000405 3300048924 Bacteria 85880
201 Ga0496124_0032852 3300048927 Bacteria 4575
202 Ga0496125_0000211 3300048928 Bacteria 121051
203 Ga0496126_0002314 3300048929 Bacteria 26123
204 Ga0496126_0002971 3300048929 Bacteria 22020
205 Ga0496126_0145940 3300048929 Bacteria 2032
206 Ga0501034_0258095 3300049571 Bacteria 1686
207 Ga0501047_0069887 3300049581 Bacteria 3381
208 Ga0501047_0072930 3300049581 Unclassified 3305
209 nmdc:mga0qj67_87311_c1 3300050509 Bacteria 2503
210 Ga0500583_0035330 3300053092 Bacteria 2229
211 Ga0500583_0048876 3300053092 Bacteria 1954
212 Ga0500641_0022202 3300053096 Bacteria 2428
213 Ga0500588_0004151 3300053146 Bacteria 3117
214 Ga0500588_0006614 3300053146 Bacteria 2636
215 Ga0500616_0000018 3300053153 Bacteria 610976
216 Ga0500616_0020193 3300053153 Bacteria 3745
217 Ga0500622_0002186 3300053156 Bacteria 14457
218 Ga0500622_0003762 3300053156 Bacteria 9908
219 Ga0500637_0002400 3300053178 Bacteria 8322
220 Ga0500637_0002488 3300053178 Bacteria 8199
221 Ga0466962_0002422 3300061719 Bacteria 8849

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039447 Ga0436361_0222166 Ga0436361_0222166_39_1199 362
2 3300042007 Ga0439449_0041536 Ga0439449_0041536_13_1266 397
3 3300053153 Ga0500616_0000018 Ga0500616_0000018_128196_129599 431
4 3300044735 Ga0466968_0023509 Ga0466968_0023509_1050_2501 438
5 3300039447 Ga0436361_0769203 Ga0436361_0769203_1015_2415 439
6 3300014968 Ga0157379_10046525 Ga0157379_100465252 441
7 3300005563 Ga0068855_100031086 Ga0068855_1000310866 445
8 3300009093 Ga0105240_10007684 Ga0105240_100076844 445
9 3300009545 Ga0105237_10009708 Ga0105237_100097088 445
10 3300009551 Ga0105238_10015767 Ga0105238_100157674 445
11 3300015684 Ga0183365_10005 Ga0183365_10005155 445
12 3300025913 Ga0207695_10029010 Ga0207695_100290106 445
13 3300028379 Ga0268266_10019311 Ga0268266_100193114 445
14 3300006358 Ga0068871_100025673 Ga0068871_1000256733 446
15 3300039447 Ga0436361_0514157 Ga0436361_0514157_2946_4433 448
16 3300053153 Ga0500616_0020193 Ga0500616_0020193_1345_2793 448
17 3300045049 Ga0466959_0088326 Ga0466959_0088326_90_1520 450
18 3300048929 Ga0496126_0002971 Ga0496126_0002971_4479_5936 450
19 3300050509 nmdc:mga0qj67_87311_c1 nmdc:mga0qj67_87311_c1_892_2319 450
20 3300041451 Ga0451791_1603702 Ga0451791_1603702_3563_5017 452
21 3300048915 Ga0496112_0086734 Ga0496112_0086734_982_2493 452
22 3300049571 Ga0501034_0258095 Ga0501034_0258095_12_1403 452
23 3300053146 Ga0500588_0006614 Ga0500588_0006614_1060_2559 453
24 3300045836 Ga0466958_0010179 Ga0466958_0010179_954_2399 456
25 3300028794 Ga0307515_10135569 Ga0307515_101355692 458
26 3300046660 Ga0495625_0020751 Ga0495625_0020751_1568_3019 458
27 3300021361 Ga0213872_10003946 Ga0213872_100039465 459
28 3300039437 Ga0436365_1700104 Ga0436365_1700104_711_2177 459
29 3300039447 Ga0436361_0410424 Ga0436361_0410424_12708_14153 459
30 3300044706 Ga0466964_0003801 Ga0466964_0003801_2859_4337 459
31 3300044842 Ga0466957_0020500 Ga0466957_0020500_1091_2569 459
32 3300061719 Ga0466962_0002422 Ga0466962_0002422_4926_6404 459
33 3300053146 Ga0500588_0004151 Ga0500588_0004151_178_1623 460
34 3300005458 Ga0070681_10000259 Ga0070681_1000025925 461
35 3300005458 Ga0070681_10056239 Ga0070681_100562393 461
36 3300005530 Ga0070679_100060148 Ga0070679_1000601482 461
37 3300005530 Ga0070679_100133564 Ga0070679_1001335642 461
38 3300005937 Ga0081455_10000311 Ga0081455_100003117 461
39 3300021361 Ga0213872_10018820 Ga0213872_100188202 461
40 3300025912 Ga0207707_10003562 Ga0207707_100035623 461
41 3300039447 Ga0436361_0114864 Ga0436361_0114864_27283_28719 461
42 3300045049 Ga0466959_0006054 Ga0466959_0006054_3040_4509 461
43 3300005329 Ga0070683_100023610 Ga0070683_1000236103 462
44 3300005331 Ga0070670_100000001 Ga0070670_100000001238 462
45 3300005335 Ga0070666_10008325 Ga0070666_100083256 462
46 3300005336 Ga0070680_100033690 Ga0070680_1000336902 462
47 3300005355 Ga0070671_100000033 Ga0070671_10000003332 462
48 3300005365 Ga0070688_100009558 Ga0070688_1000095584 462
49 3300005367 Ga0070667_100000405 Ga0070667_10000040522 462
50 3300005466 Ga0070685_10000008 Ga0070685_10000008125 462
51 3300005535 Ga0070684_100025841 Ga0070684_1000258413 462
52 3300005548 Ga0070665_100020832 Ga0070665_1000208323 462
53 3300005617 Ga0068859_100028974 Ga0068859_1000289745 462
54 3300005618 Ga0068864_100000006 Ga0068864_100000006243 462
55 3300005842 Ga0068858_100102595 Ga0068858_1001025952 462
56 3300005843 Ga0068860_100000259 Ga0068860_10000025913 462
57 3300005844 Ga0068862_100009806 Ga0068862_1000098064 462
58 3300006931 Ga0097620_100028976 Ga0097620_1000289765 462
59 3300009093 Ga0105240_10018944 Ga0105240_100189442 462
60 3300009101 Ga0105247_10004976 Ga0105247_100049763 462
61 3300009177 Ga0105248_10053314 Ga0105248_100533143 462
62 3300009553 Ga0105249_10048419 Ga0105249_100484193 462
63 3300010375 Ga0105239_10021859 Ga0105239_100218591 462
64 3300014325 Ga0163163_10000926 Ga0163163_1000092621 462
65 3300021361 Ga0213872_10001635 Ga0213872_100016354 462
66 3300025900 Ga0207710_10004386 Ga0207710_100043862 462
67 3300025925 Ga0207650_10000002 Ga0207650_10000002916 462
68 3300025941 Ga0207711_10000366 Ga0207711_1000036639 462
69 3300025944 Ga0207661_10020908 Ga0207661_100209082 462
70 3300025961 Ga0207712_10063538 Ga0207712_100635382 462
71 3300025986 Ga0207658_10000001 Ga0207658_10000001438 462
72 3300026088 Ga0207641_10147068 Ga0207641_101470681 462
73 3300026095 Ga0207676_10000001 Ga0207676_10000001916 462
74 3300026142 Ga0207698_10143060 Ga0207698_101430601 462
75 3300028379 Ga0268266_10000783 Ga0268266_100007838 462
76 3300028379 Ga0268266_10000868 Ga0268266_1000086831 462
77 3300028380 Ga0268265_10005134 Ga0268265_100051344 462
78 3300028381 Ga0268264_10000004 Ga0268264_10000004937 462
79 3300031507 Ga0307509_10128576 Ga0307509_101285761 462
80 3300039447 Ga0436361_1185031 Ga0436361_1185031_8039_9496 462
81 3300044658 Ga0466972_0027547 Ga0466972_0027547_361_1806 462
82 3300046513 Ga0495616_0001352 Ga0495616_0001352_8916_10367 462
83 3300048929 Ga0496126_0002314 Ga0496126_0002314_7075_8544 462
84 3300048929 Ga0496126_0145940 Ga0496126_0145940_454_1923 462
85 3300005458 Ga0070681_10011301 Ga0070681_100113017 463
86 3300005458 Ga0070681_10017016 Ga0070681_100170162 463
87 3300005458 Ga0070681_10022541 Ga0070681_100225415 463
88 3300005530 Ga0070679_100049648 Ga0070679_1000496481 463
89 3300005530 Ga0070679_100151619 Ga0070679_1001516192 463
90 3300005530 Ga0070679_100190071 Ga0070679_1001900712 463
91 3300005563 Ga0068855_100002914 Ga0068855_1000029145 463
92 3300005563 Ga0068855_100003682 Ga0068855_1000036822 463
93 3300005618 Ga0068864_100068175 Ga0068864_1000681753 463
94 3300007265 Ga0099794_10029344 Ga0099794_100293441 463
95 3300009093 Ga0105240_10000871 Ga0105240_1000087110 463
96 3300009093 Ga0105240_10027563 Ga0105240_100275636 463
97 3300009093 Ga0105240_10033027 Ga0105240_100330276 463
98 3300009093 Ga0105240_10083641 Ga0105240_100836414 463
99 3300009093 Ga0105240_10141964 Ga0105240_101419642 463
100 3300009545 Ga0105237_10092165 Ga0105237_100921652 463
101 3300009551 Ga0105238_10010656 Ga0105238_100106568 463
102 3300009551 Ga0105238_10191815 Ga0105238_101918152 463
103 3300010159 Ga0099796_10000040 Ga0099796_100000403 463
104 3300010375 Ga0105239_10019553 Ga0105239_100195536 463
105 3300013104 Ga0157370_10043920 Ga0157370_100439202 463
106 3300013105 Ga0157369_10018936 Ga0157369_100189364 463
107 3300013105 Ga0157369_10276176 Ga0157369_102761762 463
108 3300013307 Ga0157372_10112224 Ga0157372_101122242 463
109 3300014325 Ga0163163_10022463 Ga0163163_100224632 463
110 3300021361 Ga0213872_10003311 Ga0213872_100033114 463
111 3300025912 Ga0207707_10000465 Ga0207707_100004656 463
112 3300025912 Ga0207707_10003676 Ga0207707_100036765 463
113 3300025913 Ga0207695_10016415 Ga0207695_100164155 463
114 3300025913 Ga0207695_10061253 Ga0207695_100612534 463
115 3300025913 Ga0207695_10128521 Ga0207695_101285212 463
116 3300025917 Ga0207660_10009347 Ga0207660_100093473 463
117 3300025917 Ga0207660_10013090 Ga0207660_100130902 463
118 3300025917 Ga0207660_10018321 Ga0207660_100183213 463
119 3300025921 Ga0207652_10028435 Ga0207652_100284351 463
120 3300025921 Ga0207652_10102234 Ga0207652_101022342 463
121 3300025921 Ga0207652_10105848 Ga0207652_101058482 463
122 3300025949 Ga0207667_10004623 Ga0207667_100046238 463
123 3300025949 Ga0207667_10005093 Ga0207667_100050932 463
124 3300025961 Ga0207712_10143407 Ga0207712_101434071 463
125 3300026116 Ga0207674_10109912 Ga0207674_101099123 463
126 3300027512 Ga0209179_1000018 Ga0209179_100001824 463
127 3300031711 Ga0265314_10014491 Ga0265314_100144912 463
128 3300039447 Ga0436361_0478490 Ga0436361_0478490_25312_26757 463
129 3300045049 Ga0466959_0010204 Ga0466959_0010204_3612_5084 463
130 3300048905 Ga0496102_0002316 Ga0496102_0002316_1529_2968 463
131 3300048921 Ga0496118_0028444 Ga0496118_0028444_1613_3052 463
132 3300053092 Ga0500583_0035330 Ga0500583_0035330_143_1603 463
133 3300053092 Ga0500583_0048876 Ga0500583_0048876_380_1840 463
134 3300053096 Ga0500641_0022202 Ga0500641_0022202_607_2067 463
135 3300046689 Ga0495613_0000404 Ga0495613_0000404_24412_25905 464
136 3300049581 Ga0501047_0072930 Ga0501047_0072930_639_2099 464
137 3300005548 Ga0070665_100001667 Ga0070665_10000166717 465
138 3300025261 Ga0209233_1006184 Ga0209233_10061842 465
139 3300026118 Ga0207675_100008837 Ga0207675_1000088373 465
140 3300028379 Ga0268266_10003126 Ga0268266_1000312613 465
141 3300031995 Ga0307409_100253774 Ga0307409_1002537742 465
142 3300032005 Ga0307411_10176280 Ga0307411_101762801 465
143 3300003316 rootH1_10158072 rootH1_101580724 467
144 3300003322 rootL2_10122543 rootL2_101225432 467
145 3300003323 rootH1_10260041 rootH1_102600412 467
146 3300005539 Ga0068853_100132390 Ga0068853_1001323901 467
147 3300005548 Ga0070665_100029021 Ga0070665_1000290212 467
148 3300005564 Ga0070664_100214315 Ga0070664_1002143151 467
149 3300005578 Ga0068854_100118386 Ga0068854_1001183862 467
150 3300005614 Ga0068856_100090877 Ga0068856_1000908772 467
151 3300005617 Ga0068859_100009285 Ga0068859_1000092858 467
152 3300005842 Ga0068858_100002900 Ga0068858_1000029004 467
153 3300005843 Ga0068860_100001209 Ga0068860_1000012092 467
154 3300005844 Ga0068862_100020852 Ga0068862_1000208525 467
155 3300006931 Ga0097620_100009285 Ga0097620_1000092858 467
156 3300009093 Ga0105240_10154392 Ga0105240_101543922 467
157 3300009101 Ga0105247_10032190 Ga0105247_100321902 467
158 3300009177 Ga0105248_10219892 Ga0105248_102198922 467
159 3300009553 Ga0105249_10032855 Ga0105249_100328554 467
160 3300025903 Ga0207680_10030171 Ga0207680_100301712 467
161 3300025924 Ga0207694_10028436 Ga0207694_100284362 467
162 3300025986 Ga0207658_10211840 Ga0207658_102118401 467
163 3300026035 Ga0207703_10000916 Ga0207703_1000091614 467
164 3300026041 Ga0207639_10028151 Ga0207639_100281512 467
165 3300026078 Ga0207702_10123753 Ga0207702_101237532 467
166 3300026088 Ga0207641_10000222 Ga0207641_1000022238 467
167 3300026088 Ga0207641_10000236 Ga0207641_1000023620 467
168 3300026095 Ga0207676_10178732 Ga0207676_101787322 467
169 3300028379 Ga0268266_10000706 Ga0268266_1000070630 467
170 3300028379 Ga0268266_10014764 Ga0268266_100147641 467
171 3300028380 Ga0268265_10013850 Ga0268265_100138502 467
172 3300028381 Ga0268264_10000145 Ga0268264_10000145142 467
173 3300030521 Ga0307511_10006300 Ga0307511_100063007 467
174 3300033180 Ga0307510_10000007 Ga0307510_10000007130 467
175 3300033180 Ga0307510_10094705 Ga0307510_100947052 467
176 3300048905 Ga0496102_0092714 Ga0496102_0092714_912_2381 467
177 3300048913 Ga0496110_0210153 Ga0496110_0210153_266_1735 467
178 3300048918 Ga0496115_0090291 Ga0496115_0090291_264_1733 467
179 3300048919 Ga0496116_0001945 Ga0496116_0001945_7795_9264 467
180 3300048920 Ga0496117_0000038 Ga0496117_0000038_27801_29270 467
181 3300048921 Ga0496118_0000019 Ga0496118_0000019_126363_127832 467
182 3300048923 Ga0496120_0003097 Ga0496120_0003097_10674_12143 467
183 3300048927 Ga0496124_0032852 Ga0496124_0032852_477_1946 467
184 3300048928 Ga0496125_0000211 Ga0496125_0000211_63552_65021 467
185 3300005548 Ga0070665_100110157 Ga0070665_1001101572 469
186 3300006948 Ga0099826_10103735 Ga0099826_101037352 469
187 3300028379 Ga0268266_10084675 Ga0268266_100846752 469
188 3300031507 Ga0307509_10000002 Ga0307509_10000002381 469
189 3300049581 Ga0501047_0069887 Ga0501047_0069887_271_1761 469
190 3300053156 Ga0500622_0002186 Ga0500622_0002186_1742_3232 469
191 3300053156 Ga0500622_0003762 Ga0500622_0003762_5151_6641 469
192 3300053178 Ga0500637_0002400 Ga0500637_0002400_4607_6094 469
193 3300014968 Ga0157379_10075705 Ga0157379_100757052 470
194 3300030521 Ga0307511_10000013 Ga0307511_1000001355 471
195 3300046664 Ga0495659_0049188 Ga0495659_0049188_31_1491 471
196 3300053178 Ga0500637_0002488 Ga0500637_0002488_1135_2628 471
197 3300005355 Ga0070671_100002336 Ga0070671_1000023364 473
198 3300005367 Ga0070667_100005074 Ga0070667_1000050746 473
199 3300005548 Ga0070665_100052264 Ga0070665_1000522642 473
200 3300005617 Ga0068859_100002382 Ga0068859_1000023826 473
201 3300005841 Ga0068863_100022403 Ga0068863_1000224035 473
202 3300005842 Ga0068858_100000100 Ga0068858_10000010040 473
203 3300005843 Ga0068860_100008241 Ga0068860_1000082414 473
204 3300006931 Ga0097620_100002382 Ga0097620_1000023826 473
205 3300009101 Ga0105247_10000144 Ga0105247_1000014410 473
206 3300009177 Ga0105248_10009482 Ga0105248_100094822 473
207 3300009553 Ga0105249_10013533 Ga0105249_100135331 473
208 3300013306 Ga0163162_10057708 Ga0163162_100577082 473
209 3300014325 Ga0163163_10102095 Ga0163163_101020952 473
210 3300014968 Ga0157379_10003083 Ga0157379_100030835 473
211 3300025900 Ga0207710_10000269 Ga0207710_1000026928 473
212 3300025931 Ga0207644_10009775 Ga0207644_100097753 473
213 3300025941 Ga0207711_10069041 Ga0207711_100690412 473
214 3300025986 Ga0207658_10003925 Ga0207658_100039252 473
215 3300026035 Ga0207703_10018562 Ga0207703_100185623 473
216 3300026088 Ga0207641_10092298 Ga0207641_100922982 473
217 3300048915 Ga0496112_0066072 Ga0496112_0066072_1375_2916 473
218 3300048924 Ga0496121_0000405 Ga0496121_0000405_44097_45638 473
219 3300003203 JGI25406J46586_10002145 JGI25406J46586_100021454 474
220 3300005985 Ga0081539_10000016 Ga0081539_10000016164 474
221 3300006846 Ga0075430_100079097 Ga0075430_1000790972 474

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00083

Sugar_tr

Sugar (and other) transporter

40

496

0.94

PF07690

MFS_1

Major Facilitator Superfamily

300

507

0.82

PF07690

MFS_1

Major Facilitator Superfamily

44

441

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
4gby-assembly1.cif.gz_A the structure of the mfs (major facilitator superfamily) proton:xylose symporter xyle bound to d-xylose 0.931 18 469
4ja3-assembly1.cif.gz_A partially occluded inward open conformation of the xylose transporter xyle from e. coli 0.8998 20 456
6n3i-assembly1.cif.gz_A crystal structure of a double trp xyle mutants (g58w/l315w) 0.8942 18 469
4ja3-assembly1.cif.gz_A partially occluded inward open conformation of the xylose transporter xyle from e. coli 0.8937 20 456
4ja3-assembly2.cif.gz_B partially occluded inward open conformation of the xylose transporter xyle from e. coli 0.888 18 461
ID Description Score Start End Superfamily
4gc0A01 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9587 16 246 1.20.1250.20
4ja3A01 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9506 20 215 1.20.1250.20
4ja3A03 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9488 268 456 1.20.1250.20
4ja3A03 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.938 268 456 1.20.1250.20
af_Q04162_301_544_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9265 267 469 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A379LSH6-F1-model_v4 D-xylose transporter 0.9736 268 469 GO:0016020
GO:0022857
AF-A0A2T9UMS9-F1-model_v4 D-xylose transporter XylE 0.9674 284 472 GO:0005886
GO:0015293
AF-A0A2X2HPC1-F1-model_v4 D-xylose-proton symporter 0.9665 264 471 GO:0005886
GO:0015293
AF-T0Z3I3-F1-model_v4 Xylose permease 0.9659 184 456 GO:0016020
GO:0022857
AF-T0Z3I3-F1-model_v4 Xylose permease 0.9625 184 456 GO:0016020
GO:0022857

Feature Viewer

pLDDT pTM Quality
85.17 0.83 High
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Predicted Structure (AlphaFold2)

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