F334064

General Info

Members Datasets Scaffolds Average Seq Length
222 147 219 470

Family's Representative Sequence

Representative Sequence 3300005290|Ga0065712_10069215|Ga0065712_100692156
Length 510
Sequence MISRSATDLLRDLNARKLSSVELTQAYLDQIKQHDGQVKAFLHVDPAAVLARAKEIDDRRAAGKPVGKLGGLPVAIKDVICTQGQRTTCGSKMLENFVPPYDATVVKRLKEADAVLIGKTNMDEFAMGGSTENSAFFKTTNPWDKTRVPGGSLAASMAPLSIGTDTGGSIRQPAAFCGVTGLKPTYGRVSRYGLVAFASSLDQIGPMAATAEDAALLLEVLAGHDPLDSTSANIPTPQYTSSLSQPLQGLKLGLVKEHFGPGLDTEVESAVREAVKVYQSLGATVKDISLPHSKYGIATYYIIAPSEASSNLARYDGVHYGYRTDEKQMLAELAAERKALEAKKDEKGLKNLDTALIRLYRKTRAEGFGPEVKRRIMLGTYALSAGYADKYYVQALKVRRLIRGDYDAAFQEVDFIIGPTAPNPPFKIGEKSGDPLAMYLEDLYTVTANLAGIAGISVPCGLTSGKTTGSPLPIGLQIQSRPFDEDRLLRAAAMFQRGTDWHTKRPKLVE

Samples

Sample ID Description Type Environment
1 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 2836160341 Unclassified Planctomycetes Bin 134 Isolate Unclassified
3 2929297113 Heliophilum fasciatum MTM Isolate Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
60 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
84 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
85 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
86 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
87 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
88 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
89 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
90 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
91 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
92 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
93 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
94 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
95 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
96 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
97 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
98 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
99 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
100 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
101 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
102 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
103 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
104 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
105 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
106 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
107 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
108 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
109 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
113 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
117 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
118 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
128 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
131 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
132 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
133 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
134 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
135 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
140 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
141 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
142 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
143 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
144 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
145 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
146 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
147 8007375930 Clostridium sp. YIM B02565 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.65
Metatranscriptomes 0
Isolates 1.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.7
Nodule 2.7
Rhizoplane 0.9
Rhizosphere 90.54
Stem 0
Stem Tuber 0
Unclassified 3.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MRS1b_contig_4667394 2162886011 Bacteria 3938
2 Ga0065712_10067986 3300005290 Archaea 17992
3 Ga0065712_10069215 3300005290 Bacteria 7717
4 Ga0065715_10000220 3300005293 Archaea 21174
5 Ga0065715_10092334 3300005293 Bacteria 5179
6 Ga0070690_100025926 3300005330 Bacteria 3612
7 Ga0070670_100000447 3300005331 Bacteria 33423
8 Ga0070666_10000772 3300005335 Bacteria 19369
9 Ga0070689_100006102 3300005340 Bacteria 8305
10 Ga0070689_100008169 3300005340 Bacteria 7356
11 Ga0070687_100031635 3300005343 Bacteria 2597
12 Ga0070668_100070184 3300005347 Bacteria 2727
13 Ga0070669_100004669 3300005353 Bacteria 9888
14 Ga0070669_100089828 3300005353 Bacteria 2302
15 Ga0070675_100000998 3300005354 Bacteria 20285
16 Ga0070671_100043763 3300005355 Bacteria 3720
17 Ga0070688_100007341 3300005365 Bacteria 5939
18 Ga0070701_10019461 3300005438 Bacteria 3206
19 Ga0070700_100028011 3300005441 Bacteria 3348
20 Ga0070700_100098513 3300005441 Bacteria 1922
21 Ga0070694_100002510 3300005444 Bacteria 10833
22 Ga0070708_100003664 3300005445 Bacteria 12051
23 Ga0070708_100010855 3300005445 Bacteria 7401
24 Ga0070708_100057974 3300005445 Bacteria 3450
25 Ga0070681_10007851 3300005458 Bacteria 10436
26 Ga0070681_10018905 3300005458 Bacteria 6894
27 Ga0068867_100000147 3300005459 Bacteria 45184
28 Ga0068867_100032579 3300005459 Bacteria 3770
29 Ga0070706_100000391 3300005467 Bacteria 52742
30 Ga0070706_100002741 3300005467 Bacteria 17614
31 Ga0070707_100009160 3300005468 Bacteria 9185
32 Ga0070707_100168549 3300005468 Bacteria 2134
33 Ga0070698_100086383 3300005471 Bacteria 3123
34 Ga0070699_100106674 3300005518 Bacteria 2457
35 Ga0070697_100004244 3300005536 Bacteria 10979
36 Ga0070696_100057932 3300005546 Bacteria 2705
37 Ga0070665_100029425 3300005548 Bacteria 5529
38 Ga0070704_100002260 3300005549 Bacteria 10750
39 Ga0068855_100004943 3300005563 Bacteria 16256
40 Ga0068857_100002786 3300005577 Bacteria 14379
41 Ga0068859_100002071 3300005617 Bacteria 20473
42 Ga0068859_100002533 3300005617 Bacteria 18549
43 Ga0068864_100029871 3300005618 Bacteria 4619
44 Ga0068864_100075453 3300005618 Bacteria 2944
45 Ga0068861_100001293 3300005719 Bacteria 15634
46 Ga0068870_10019458 3300005840 Bacteria 3293
47 Ga0068858_100015339 3300005842 Bacteria 7208
48 Ga0068860_100006114 3300005843 Bacteria 12108
49 Ga0068862_100001293 3300005844 Bacteria 23404
50 Ga0075364_10001117 3300006051 Bacteria 14327
51 Ga0075362_10000100 3300006177 Bacteria 24483
52 Ga0097621_100062439 3300006237 Bacteria 3059
53 Ga0075428_100004685 3300006844 Bacteria 15139
54 Ga0075428_100019416 3300006844 Bacteria 7523
55 Ga0075428_100068354 3300006844 Bacteria 3886
56 Ga0075430_100036148 3300006846 Bacteria 4188
57 Ga0075433_10011248 3300006852 Bacteria 7204
58 Ga0075434_100002681 3300006871 Bacteria 15718
59 Ga0075434_100004940 3300006871 Archaea 12090
60 Ga0075436_100015009 3300006914 Bacteria 5310
61 Ga0075436_100052798 3300006914 Bacteria 2806
62 Ga0097620_100002071 3300006931 Bacteria 20473
63 Ga0097620_100002533 3300006931 Bacteria 18549
64 Ga0079104_1000449 3300006946 Bacteria 46645
65 Ga0079104_1002471 3300006946 Bacteria 9933
66 Ga0079104_1007676 3300006946 Bacteria 3867
67 Ga0075435_100012127 3300007076 Bacteria 6373
68 Ga0075435_100019556 3300007076 Bacteria 5176
69 Ga0105240_10001780 3300009093 Bacteria 36357
70 Ga0111539_10033886 3300009094 Bacteria 6196
71 Ga0111539_10224675 3300009094 Bacteria 2187
72 Ga0114129_10000984 3300009147 Archaea 37233
73 Ga0114129_10083384 3300009147 Bacteria 4441
74 Ga0114129_10110522 3300009147 Bacteria 3794
75 Ga0105243_10039279 3300009148 Bacteria 3688
76 Ga0105238_10000683 3300009551 Bacteria 35558
77 Ga0105239_10129921 3300010375 Bacteria 2801
78 Ga0157369_10171707 3300013105 Bacteria 2284
79 Ga0163162_10003669 3300013306 Bacteria 14723
80 Ga0157375_10009638 3300013308 Bacteria 8487
81 Ga0213872_10035865 3300021361 Bacteria 2268
82 Ga0228598_1004771 3300024227 Bacteria 2865
83 Ga0207680_10000363 3300025903 Bacteria 21806
84 Ga0207643_10001181 3300025908 Bacteria 15496
85 Ga0207684_10000269 3300025910 Bacteria 77057
86 Ga0207684_10002574 3300025910 Bacteria 18205
87 Ga0207695_10003207 3300025913 Bacteria 23305
88 Ga0207646_10001278 3300025922 Bacteria 31485
89 Ga0207681_10000566 3300025923 Bacteria 25276
90 Ga0207694_10004924 3300025924 Bacteria 10356
91 Ga0207650_10002615 3300025925 Bacteria 12464
92 Ga0207650_10139710 3300025925 Bacteria 1903
93 Ga0207659_10001222 3300025926 Bacteria 15363
94 Ga0207670_10003736 3300025936 Bacteria 8086
95 Ga0207670_10039830 3300025936 Bacteria 3080
96 Ga0207667_10075505 3300025949 Bacteria 3500
97 Ga0207708_10032195 3300026075 Bacteria 3983
98 Ga0207641_10309660 3300026088 Bacteria 1494
99 Ga0207648_10000446 3300026089 Bacteria 45706
100 Ga0207648_10048137 3300026089 Bacteria 3733
101 Ga0207676_10010914 3300026095 Bacteria 6481
102 Ga0207676_10070841 3300026095 Bacteria 2797
103 Ga0207674_10005779 3300026116 Bacteria 14676
104 Ga0207674_10035810 3300026116 Bacteria 5178
105 Ga0207675_100001058 3300026118 Bacteria 27297
106 Ga0209281_1000544 3300027111 Bacteria 47223
107 Ga0209281_1001002 3300027111 Bacteria 22191
108 Ga0209281_1003770 3300027111 Bacteria 4820
109 Ga0207428_10000224 3300027907 Bacteria 78533
110 Ga0268266_10010907 3300028379 Bacteria 7912
111 Ga0268265_10000540 3300028380 Bacteria 38471
112 Ga0268264_10012807 3300028381 Bacteria 6902
113 Ga0268264_10042934 3300028381 Bacteria 3744
114 Ga0265337_1007724 3300028556 Bacteria 3989
115 Ga0265337_1007764 3300028556 Bacteria 3979
116 Ga0265326_10001040 3300028558 Bacteria 9925
117 Ga0265319_1000364 3300028563 Bacteria 32786
118 Ga0265334_10001304 3300028573 Bacteria 12042
119 Ga0265334_10006861 3300028573 Bacteria 4891
120 Ga0265318_10002079 3300028577 Bacteria 10965
121 Ga0265336_10002588 3300028666 Bacteria 7394
122 Ga0265338_10003684 3300028800 Bacteria 21347
123 Ga0265338_10006120 3300028800 Bacteria 15442
124 Ga0265338_10020123 3300028800 Bacteria 7037
125 Ga0265330_10027764 3300031235 Bacteria 2555
126 Ga0265325_10000200 3300031241 Bacteria 42369
127 Ga0265325_10020691 3300031241 Bacteria 3624
128 Ga0265339_10000431 3300031249 Bacteria 33053
129 Ga0265331_10000433 3300031250 Bacteria 41262
130 Ga0265327_10004230 3300031251 Bacteria 12886
131 Ga0265316_10002778 3300031344 Bacteria 17937
132 Ga0265316_10005997 3300031344 Bacteria 11688
133 Ga0265316_10008444 3300031344 Bacteria 9559
134 Ga0265316_10155644 3300031344 Bacteria 1710
135 Ga0265313_10000946 3300031595 Bacteria 28813
136 Ga0316575_10025398 3300031665 Bacteria 2297
137 Ga0265314_10000158 3300031711 Bacteria 102763
138 Ga0316576_10009514 3300031727 Bacteria 6277
139 Ga0316576_10017301 3300031727 Bacteria 4893
140 Ga0316576_10145984 3300031727 Bacteria 1782
141 Ga0316578_10035657 3300031728 Bacteria 2860
142 Ga0316578_10044417 3300031728 Bacteria 2585
143 Ga0316574_0001920 3300035398 Bacteria 10178
144 Ga0373931_0003833 3300035691 Bacteria 6799
145 Ga0373931_0042347 3300035691 Bacteria 2394
146 Ga0316582_0024959 3300036647 Bacteria 3583
147 Ga0316582_0042897 3300036647 Bacteria 2836
148 Ga0316582_0083862 3300036647 Bacteria 2086
149 Ga0316584_0024493 3300036712 Bacteria 4417
150 Ga0316584_0048022 3300036712 Bacteria 3189
151 Ga0436364_0754069 3300037853 Bacteria 2281
152 Ga0400489_91616 3300039093 Unclassified 1841
153 Ga0436361_0762121 3300039447 Bacteria 2367
154 Ga0451577_0000019 3300042876 Bacteria 506976
155 Ga0451577_0000353 3300042876 Bacteria 85621
156 Ga0451577_0000355 3300042876 Bacteria 85504
157 Ga0451577_0009509 3300042876 Bacteria 9355
158 Ga0451577_0053274 3300042876 Bacteria 3612
159 Ga0451577_0060457 3300042876 Bacteria 3378
160 Ga0453683_0001616 3300044673 Bacteria 19001
161 Ga0453684_0000057 3300044712 Bacteria 506899
162 Ga0453684_0001092 3300044712 Bacteria 85621
163 Ga0453684_0001094 3300044712 Bacteria 85513
164 Ga0453684_0002275 3300044712 Bacteria 47415
165 Ga0453684_0077802 3300044712 Bacteria 4154
166 Ga0453684_0084039 3300044712 Bacteria 3961
167 Ga0453684_0125853 3300044712 Bacteria 3085
168 Ga0451576_0067399 3300045051 Bacteria 3726
169 Ga0495659_0004957 3300046664 Bacteria 4189
170 Ga0495672_0028576 3300047320 Bacteria 3526
171 Ga0496114_0152043 3300048917 Bacteria 2008
172 Ga0496115_0000077 3300048918 Bacteria 89885
173 Ga0496118_0008841 3300048921 Bacteria 10307
174 Ga0496126_0000043 3300048929 Bacteria 337789
175 Ga0496126_0000047 3300048929 Bacteria 322212
176 Ga0501031_0002465 3300049568 Bacteria 11806
177 Ga0501031_0029766 3300049568 Bacteria 3562
178 Ga0501034_0000728 3300049571 Bacteria 49767
179 Ga0501034_0002421 3300049571 Bacteria 22578
180 Ga0501036_0069960 3300049572 Bacteria 2967
181 Ga0501037_0003752 3300049573 Bacteria 11027
182 Ga0501037_0045103 3300049573 Bacteria 3236
183 Ga0501038_0026946 3300049574 Bacteria 5116
184 Ga0501039_0001883 3300049575 Bacteria 15513
185 Ga0501039_0124060 3300049575 Bacteria 2025
186 Ga0501042_0056929 3300049578 Bacteria 2790
187 Ga0501042_0121947 3300049578 Bacteria 1877
188 Ga0501043_0026726 3300049579 Bacteria 4528
189 Ga0501046_0002729 3300049580 Bacteria 16433
190 Ga0501046_0004840 3300049580 Bacteria 12134
191 Ga0501046_0059240 3300049580 Bacteria 3001
192 Ga0501067_0033757 3300049583 Bacteria 2839
193 Ga0501069_0027824 3300049585 Bacteria 3099
194 Ga0501072_0061823 3300049588 Bacteria 2954
195 Ga0501073_0074529 3300049589 Bacteria 2363
196 Ga0501075_0008287 3300049591 Bacteria 7245
197 Ga0501075_0063556 3300049591 Bacteria 2783
198 Ga0501076_0182942 3300049592 Bacteria 1709
199 Ga0501077_0011556 3300049593 Bacteria 5515
200 Ga0501079_0032411 3300049741 Bacteria 4017
201 Ga0501081_0004897 3300049743 Bacteria 8606
202 Ga0501081_0041546 3300049743 Bacteria 3150
203 Ga0501035_0009242 3300049822 Bacteria 9166
204 Ga0501035_0020322 3300049822 Bacteria 6097
205 nmdc:mga03683_140_c1 3300050489 Bacteria 24497
206 nmdc:mga05p37_5184_c1 3300050507 Bacteria 15289
207 nmdc:mga05p37_64977_c1 3300050507 Bacteria 4490
208 nmdc:mga05p37_88156_c1 3300050507 Bacteria 3825
209 nmdc:mga0n895_1407_c1 3300050512 Archaea 17950
210 nmdc:mga0n895_14402_c1 3300050512 Bacteria 7180
211 nmdc:mga0n895_188873_c1 3300050512 Bacteria 2091
212 nmdc:mga0n895_28503_c1 3300050512 Bacteria 5312
213 nmdc:mga0rr50_14747_c1 3300050513 Bacteria 5138
214 nmdc:mga0a205_10259_c1 3300050515 Archaea 7314
215 Ga0500595_000042 3300053119 Bacteria 95620
216 Ga0500585_051354 3300053144 Bacteria 1473
217 Ga0500638_000007 3300053162 Bacteria 129134
218 Ga0501084_0062474 3300054114 Bacteria 3118
219 Ga0590071_012170 3300059421 Bacteria 2017

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300026088 Ga0207641_10309660 Ga0207641_103096601 365
2 3300050512 nmdc:mga0n895_188873_c1 nmdc:mga0n895_188873_c1_891_2081 367
3 3300053144 Ga0500585_051354 Ga0500585_051354_241_1461 383
4 3300049589 Ga0501073_0074529 Ga0501073_0074529_1052_2347 387
5 3300028381 Ga0268264_10042934 Ga0268264_100429343 418
6 3300037853 Ga0436364_0754069 Ga0436364_0754069_251_1684 423
7 3300006844 Ga0075428_100068354 Ga0075428_1000683544 424
8 3300006846 Ga0075430_100036148 Ga0075430_1000361482 425
9 3300009147 Ga0114129_10083384 Ga0114129_100833845 425
10 3300050507 nmdc:mga05p37_5184_c1 nmdc:mga05p37_5184_c1_2315_3757 425
11 3300005335 Ga0070666_10000772 Ga0070666_1000077216 426
12 3300025903 Ga0207680_10000363 Ga0207680_1000036318 426
13 3300048921 Ga0496118_0008841 Ga0496118_0008841_6016_7440 430
14 3300010375 Ga0105239_10129921 Ga0105239_101299213 431
15 3300048918 Ga0496115_0000077 Ga0496115_0000077_67591_69015 431
16 3300048929 Ga0496126_0000047 Ga0496126_0000047_225567_226991 431
17 3300006946 Ga0079104_1000449 Ga0079104_100044927 439
18 3300013306 Ga0163162_10003669 Ga0163162_100036696 439
19 3300027111 Ga0209281_1000544 Ga0209281_100054414 439
20 3300049591 Ga0501075_0008287 Ga0501075_0008287_3947_5419 444
21 3300049593 Ga0501077_0011556 Ga0501077_0011556_1991_3463 444
22 3300049741 Ga0501079_0032411 Ga0501079_0032411_1309_2781 444
23 3300005330 Ga0070690_100025926 Ga0070690_1000259263 446
24 3300005340 Ga0070689_100006102 Ga0070689_1000061028 446
25 3300005340 Ga0070689_100008169 Ga0070689_1000081697 446
26 3300005343 Ga0070687_100031635 Ga0070687_1000316353 446
27 3300005347 Ga0070668_100070184 Ga0070668_1000701842 446
28 3300005353 Ga0070669_100004669 Ga0070669_1000046695 446
29 3300005354 Ga0070675_100000998 Ga0070675_10000099816 446
30 3300005438 Ga0070701_10019461 Ga0070701_100194614 446
31 3300005441 Ga0070700_100028011 Ga0070700_1000280113 446
32 3300005441 Ga0070700_100098513 Ga0070700_1000985132 446
33 3300005444 Ga0070694_100002510 Ga0070694_1000025107 446
34 3300005459 Ga0068867_100000147 Ga0068867_10000014733 446
35 3300005549 Ga0070704_100002260 Ga0070704_1000022605 446
36 3300005617 Ga0068859_100002071 Ga0068859_1000020715 446
37 3300005617 Ga0068859_100002533 Ga0068859_1000025338 446
38 3300005618 Ga0068864_100029871 Ga0068864_1000298714 446
39 3300005618 Ga0068864_100075453 Ga0068864_1000754533 446
40 3300005719 Ga0068861_100001293 Ga0068861_10000129316 446
41 3300005840 Ga0068870_10019458 Ga0068870_100194583 446
42 3300005842 Ga0068858_100015339 Ga0068858_1000153397 446
43 3300005843 Ga0068860_100006114 Ga0068860_1000061145 446
44 3300005844 Ga0068862_100001293 Ga0068862_10000129325 446
45 3300006237 Ga0097621_100062439 Ga0097621_1000624393 446
46 3300006931 Ga0097620_100002071 Ga0097620_1000020715 446
47 3300006931 Ga0097620_100002533 Ga0097620_10000253313 446
48 3300009094 Ga0111539_10033886 Ga0111539_100338862 446
49 3300009148 Ga0105243_10039279 Ga0105243_100392795 446
50 3300013308 Ga0157375_10009638 Ga0157375_100096388 446
51 3300025908 Ga0207643_10001181 Ga0207643_100011813 446
52 3300025923 Ga0207681_10000566 Ga0207681_1000056610 446
53 3300025926 Ga0207659_10001222 Ga0207659_100012222 446
54 3300025936 Ga0207670_10003736 Ga0207670_100037367 446
55 3300025936 Ga0207670_10039830 Ga0207670_100398303 446
56 3300026075 Ga0207708_10032195 Ga0207708_100321953 446
57 3300026089 Ga0207648_10000446 Ga0207648_1000044633 446
58 3300026095 Ga0207676_10010914 Ga0207676_100109145 446
59 3300026095 Ga0207676_10070841 Ga0207676_100708412 446
60 3300026116 Ga0207674_10035810 Ga0207674_100358103 446
61 3300026118 Ga0207675_100001058 Ga0207675_10000105816 446
62 3300027907 Ga0207428_10000224 Ga0207428_1000022470 446
63 3300028380 Ga0268265_10000540 Ga0268265_1000054018 446
64 3300028381 Ga0268264_10012807 Ga0268264_100128075 446
65 3300049583 Ga0501067_0033757 Ga0501067_0033757_162_1625 447
66 3300049585 Ga0501069_0027824 Ga0501069_0027824_950_2413 448
67 3300006871 Ga0075434_100002681 Ga0075434_1000026816 450
68 3300028800 Ga0265338_10020123 Ga0265338_100201238 450
69 3300031241 Ga0265325_10000200 Ga0265325_1000020028 450
70 3300031249 Ga0265339_10000431 Ga0265339_100004319 450
71 3300031250 Ga0265331_10000433 Ga0265331_1000043324 450
72 3300031595 Ga0265313_10000946 Ga0265313_1000094623 450
73 3300031711 Ga0265314_10000158 Ga0265314_1000015817 450
74 3300050512 nmdc:mga0n895_14402_c1 nmdc:mga0n895_14402_c1_1123_2592 450
75 3300005355 Ga0070671_100043763 Ga0070671_1000437634 451
76 3300045051 Ga0451576_0067399 Ga0451576_0067399_2009_3472 451
77 3300036647 Ga0316582_0042897 Ga0316582_0042897_1196_2611 452
78 3300036712 Ga0316584_0024493 Ga0316584_0024493_2140_3555 452
79 3300028556 Ga0265337_1007764 Ga0265337_10077643 453
80 3300028573 Ga0265334_10001304 Ga0265334_100013044 453
81 3300028800 Ga0265338_10006120 Ga0265338_100061204 453
82 3300049580 Ga0501046_0002729 Ga0501046_0002729_8904_10445 453
83 3300005458 Ga0070681_10018905 Ga0070681_100189054 454
84 3300006852 Ga0075433_10011248 Ga0075433_100112483 456
85 3300006914 Ga0075436_100015009 Ga0075436_1000150092 456
86 3300007076 Ga0075435_100012127 Ga0075435_1000121278 456
87 3300009094 Ga0111539_10224675 Ga0111539_102246752 456
88 3300021361 Ga0213872_10035865 Ga0213872_100358651 456
89 3300031251 Ga0265327_10004230 Ga0265327_100042305 456
90 3300039447 Ga0436361_0762121 Ga0436361_0762121_526_1968 456
91 3300050512 nmdc:mga0n895_28503_c1 nmdc:mga0n895_28503_c1_317_1786 456
92 3300050513 nmdc:mga0rr50_14747_c1 nmdc:mga0rr50_14747_c1_2662_4131 456
93 3300031728 Ga0316578_10044417 Ga0316578_100444172 457
94 3300042876 Ga0451577_0000019 Ga0451577_0000019_144949_146388 457
95 3300044712 Ga0453684_0000057 Ga0453684_0000057_144872_146311 457
96 3300048917 Ga0496114_0152043 Ga0496114_0152043_308_1849 457
97 3300005467 Ga0070706_100000391 Ga0070706_1000003914 458
98 3300005536 Ga0070697_100004244 Ga0070697_1000042445 458
99 3300025910 Ga0207684_10000269 Ga0207684_1000026952 458
100 3300046664 Ga0495659_0004957 Ga0495659_0004957_933_2396 458
101 3300048929 Ga0496126_0000043 Ga0496126_0000043_51542_52975 458
102 3300005563 Ga0068855_100004943 Ga0068855_1000049437 459
103 3300009093 Ga0105240_10001780 Ga0105240_1000178016 459
104 3300013105 Ga0157369_10171707 Ga0157369_101717072 459
105 3300025913 Ga0207695_10003207 Ga0207695_1000320725 459
106 3300006946 Ga0079104_1002471 Ga0079104_10024711 460
107 3300006946 Ga0079104_1007676 Ga0079104_10076763 460
108 3300027111 Ga0209281_1001002 Ga0209281_10010022 460
109 3300027111 Ga0209281_1003770 Ga0209281_10037703 460
110 3300042876 Ga0451577_0000355 Ga0451577_0000355_72825_74264 460
111 3300044673 Ga0453683_0001616 Ga0453683_0001616_5152_6591 460
112 3300044712 Ga0453684_0001094 Ga0453684_0001094_72833_74272 460
113 3300044712 Ga0453684_0002275 Ga0453684_0002275_6692_8131 460
114 3300047320 Ga0495672_0028576 Ga0495672_0028576_298_1737 460
115 3300059421 Ga0590071_012170 Ga0590071_012170_433_1875 460
116 3300005458 Ga0070681_10007851 Ga0070681_100078515 461
117 3300024227 Ga0228598_1004771 Ga0228598_10047713 461
118 3300042876 Ga0451577_0060457 Ga0451577_0060457_188_1657 461
119 iso_pu_bacteria 2836160341 2836165247 461
120 3300005518 Ga0070699_100106674 Ga0070699_1001066741 462
121 3300006844 Ga0075428_100004685 Ga0075428_1000046852 462
122 3300009147 Ga0114129_10110522 Ga0114129_101105224 462
123 3300025949 Ga0207667_10075505 Ga0207667_100755053 462
124 3300053119 Ga0500595_000042 Ga0500595_000042_49164_50621 462
125 3300005331 Ga0070670_100000447 Ga0070670_10000044715 463
126 3300005577 Ga0068857_100002786 Ga0068857_10000278613 463
127 3300025925 Ga0207650_10002615 Ga0207650_1000261511 463
128 3300026116 Ga0207674_10005779 Ga0207674_1000577914 463
129 3300042876 Ga0451577_0053274 Ga0451577_0053274_592_2052 463
130 3300044712 Ga0453684_0084039 Ga0453684_0084039_1845_3305 463
131 3300049591 Ga0501075_0063556 Ga0501075_0063556_69_1535 463
132 3300050507 nmdc:mga05p37_88156_c1 nmdc:mga05p37_88156_c1_1534_3009 463
133 iso_pu_bacteria 2929297113 2929297802 463
134 iso_pu_bacteria 8007375930 8007376297 463
135 3300005293 Ga0065715_10092334 Ga0065715_100923341 464
136 3300005353 Ga0070669_100089828 Ga0070669_1000898282 464
137 3300005459 Ga0068867_100032579 Ga0068867_1000325792 464
138 3300026089 Ga0207648_10048137 Ga0207648_100481374 464
139 3300031727 Ga0316576_10017301 Ga0316576_100173013 464
140 3300031728 Ga0316578_10035657 Ga0316578_100356573 464
141 3300036647 Ga0316582_0083862 Ga0316582_0083862_610_2070 464
142 3300036712 Ga0316584_0048022 Ga0316584_0048022_651_2111 464
143 3300005290 Ga0065712_10069215 Ga0065712_100692156 465
144 3300006051 Ga0075364_10001117 Ga0075364_100011174 465
145 3300006177 Ga0075362_10000100 Ga0075362_1000010014 465
146 3300009551 Ga0105238_10000683 Ga0105238_1000068313 465
147 3300028556 Ga0265337_1007724 Ga0265337_10077244 465
148 3300028558 Ga0265326_10001040 Ga0265326_100010409 465
149 3300028563 Ga0265319_1000364 Ga0265319_100036427 465
150 3300028573 Ga0265334_10006861 Ga0265334_100068614 465
151 3300028577 Ga0265318_10002079 Ga0265318_100020795 465
152 3300028800 Ga0265338_10003684 Ga0265338_1000368415 465
153 3300031665 Ga0316575_10025398 Ga0316575_100253982 465
154 3300031727 Ga0316576_10009514 Ga0316576_100095142 465
155 3300035691 Ga0373931_0003833 Ga0373931_0003833_3061_4533 465
156 3300042876 Ga0451577_0000353 Ga0451577_0000353_40537_41997 465
157 3300044712 Ga0453684_0001092 Ga0453684_0001092_43625_45085 465
158 3300044712 Ga0453684_0077802 Ga0453684_0077802_1465_2922 465
159 3300044712 Ga0453684_0125853 Ga0453684_0125853_414_1871 465
160 3300049575 Ga0501039_0124060 Ga0501039_0124060_226_1689 465
161 3300050489 nmdc:mga03683_140_c1 nmdc:mga03683_140_c1_10700_12157 465
162 3300053162 Ga0500638_000007 Ga0500638_000007_4424_5881 465
163 3300005445 Ga0070708_100003664 Ga0070708_1000036644 466
164 3300005467 Ga0070706_100002741 Ga0070706_10000274113 466
165 3300005468 Ga0070707_100009160 Ga0070707_1000091609 466
166 3300005471 Ga0070698_100086383 Ga0070698_1000863834 466
167 3300025910 Ga0207684_10002574 Ga0207684_1000257414 466
168 3300025922 Ga0207646_10001278 Ga0207646_1000127832 466
169 3300028666 Ga0265336_10002588 Ga0265336_100025882 466
170 3300031344 Ga0265316_10005997 Ga0265316_100059973 466
171 3300031344 Ga0265316_10008444 Ga0265316_100084442 466
172 3300031727 Ga0316576_10145984 Ga0316576_101459842 466
173 3300035398 Ga0316574_0001920 Ga0316574_0001920_4073_5542 466
174 3300035691 Ga0373931_0042347 Ga0373931_0042347_207_1673 466
175 3300036647 Ga0316582_0024959 Ga0316582_0024959_912_2372 466
176 3300042876 Ga0451577_0009509 Ga0451577_0009509_6353_7885 466
177 3300049568 Ga0501031_0002465 Ga0501031_0002465_9620_11086 466
178 3300049568 Ga0501031_0029766 Ga0501031_0029766_533_1999 466
179 3300049572 Ga0501036_0069960 Ga0501036_0069960_382_1848 466
180 3300049573 Ga0501037_0003752 Ga0501037_0003752_8948_10414 466
181 3300049573 Ga0501037_0045103 Ga0501037_0045103_1104_2570 466
182 3300049574 Ga0501038_0026946 Ga0501038_0026946_2899_4365 466
183 3300049575 Ga0501039_0001883 Ga0501039_0001883_13514_14980 466
184 3300049578 Ga0501042_0056929 Ga0501042_0056929_418_1884 466
185 3300049578 Ga0501042_0121947 Ga0501042_0121947_369_1844 466
186 3300049579 Ga0501043_0026726 Ga0501043_0026726_672_2138 466
187 3300049580 Ga0501046_0004840 Ga0501046_0004840_5676_7142 466
188 3300049580 Ga0501046_0059240 Ga0501046_0059240_28_1503 466
189 3300049588 Ga0501072_0061823 Ga0501072_0061823_641_2107 466
190 3300049592 Ga0501076_0182942 Ga0501076_0182942_51_1601 466
191 3300049743 Ga0501081_0004897 Ga0501081_0004897_4818_6293 466
192 3300049822 Ga0501035_0009242 Ga0501035_0009242_3271_4737 466
193 3300049822 Ga0501035_0020322 Ga0501035_0020322_1560_3026 466
194 3300005365 Ga0070688_100007341 Ga0070688_1000073411 467
195 3300005445 Ga0070708_100010855 Ga0070708_1000108556 467
196 3300005468 Ga0070707_100168549 Ga0070707_1001685493 467
197 3300005548 Ga0070665_100029425 Ga0070665_1000294252 467
198 3300006844 Ga0075428_100019416 Ga0075428_1000194168 467
199 3300025924 Ga0207694_10004924 Ga0207694_100049242 467
200 3300025925 Ga0207650_10139710 Ga0207650_101397102 467
201 3300028379 Ga0268266_10010907 Ga0268266_100109072 467
202 3300031235 Ga0265330_10027764 Ga0265330_100277642 467
203 3300031241 Ga0265325_10020691 Ga0265325_100206912 467
204 3300031344 Ga0265316_10002778 Ga0265316_1000277815 467
205 3300031344 Ga0265316_10155644 Ga0265316_101556441 467
206 3300039093 Ga0400489_91616 Ga0400489_91616_83_1546 467
207 3300049571 Ga0501034_0000728 Ga0501034_0000728_509_2053 467
208 3300049571 Ga0501034_0002421 Ga0501034_0002421_7025_8563 467
209 3300049743 Ga0501081_0041546 Ga0501081_0041546_1226_2764 467
210 3300054114 Ga0501084_0062474 Ga0501084_0062474_608_2146 467
211 3300005445 Ga0070708_100057974 Ga0070708_1000579744 468
212 3300005546 Ga0070696_100057932 Ga0070696_1000579323 468
213 2162886011 MRS1b_contig_4667394 MRS1b_0672.00000420 470
214 3300005290 Ga0065712_10067986 Ga0065712_1006798615 470
215 3300005293 Ga0065715_10000220 Ga0065715_1000022012 470
216 3300006871 Ga0075434_100004940 Ga0075434_10000494010 470
217 3300006914 Ga0075436_100052798 Ga0075436_1000527982 470
218 3300007076 Ga0075435_100019556 Ga0075435_1000195564 470
219 3300009147 Ga0114129_10000984 Ga0114129_1000098432 470
220 3300050507 nmdc:mga05p37_64977_c1 nmdc:mga05p37_64977_c1_2849_4297 470
221 3300050512 nmdc:mga0n895_1407_c1 nmdc:mga0n895_1407_c1_3973_5421 470
222 3300050515 nmdc:mga0a205_10259_c1 nmdc:mga0a205_10259_c1_3131_4579 470

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01425

Amidase

Amidase

22

489

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ip4-assembly1.cif.gz_A the high resolution structure of gatcab 0.9724 1 466
3ip4-assembly1.cif.gz_A the high resolution structure of gatcab 0.9622 1 466
3h0r-assembly7.cif.gz_S structure of trna-dependent amidotransferase gatcab from aquifex aeolicus 0.9587 4 470
4wj3-assembly2.cif.gz_D crystal structure of the asparagine transamidosome from pseudomonas aeruginosa 0.9575 4 469
3h0r-assembly7.cif.gz_S structure of trna-dependent amidotransferase gatcab from aquifex aeolicus 0.9512 4 470
ID Description Score Start End Superfamily
2dqnA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9721 1 465 3.90.1300.10
af_Q9LI77_43_527_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9673 9 459 3.90.1300.10
af_Q5FWT5_3_499_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9627 7 463 3.90.1300.10
2dqnA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9599 1 465 3.90.1300.10
4wj3D00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9575 4 469 3.90.1300.10
ID Description Score Start End GO Terms
AF-A0A524FFN2-F1-model_v4 Amidase 0.9862 3 118 GO:0012505
AF-A0A3S1E0Z4-F1-model_v4 Amidase 0.9859 4 127 GO:0012505
AF-A0A3C0NBG5-F1-model_v4 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A (EC 6.3.5.-) 0.9832 337 470 GO:0016740
GO:0016874
AF-A0A538GMU2-F1-model_v4 Amidase domain-containing protein 0.9832 348 461 GO:0003824
AF-A0A7C2G498-F1-model_v4 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A 0.9824 19 133 GO:0003824

Feature Viewer

pLDDT pTM Quality
89.89 0.91 High
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Predicted Structure (AlphaFold2)

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