F334649

General Info

Members Datasets Scaffolds Average Seq Length
222 111 205 197

Family's Representative Sequence

Representative Sequence 3300032168|Ga0316593_10103689|Ga0316593_101036892
Length 224
Sequence LTRHDDNKHCASDYFIVEYFINSIIVVMQLRTAEVERNTLETQIKIKINLDGTGQASFATGVPFLEHMLDQIARHGLIDMDITAQGDLHIDDHHSVEDIGITLGQAFAKAIGDKKGIYRYGHAYVPLDEALSRVVVDFSGRPGLVYDVTFPRASIGRFDVDLFREFFQGFVNHAGVTLHIDNLKGVNAHHVAETIFKAMGRALRMAISPDPRMAGMMPSTKGSL

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2547132374 Acidovorax radicis N35 Isolate Unclassified
3 2596583598 Ralstonia sp. UNCCL144 Isolate Unclassified
4 2599185178 Ralstonia sp. NFACC01 Isolate Rhizoplane
5 2738541276 Cellvibrio sp. YR554 Isolate Unclassified
6 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
7 2842747753 Variovorax sp. R-72060 Isolate Unclassified
8 2891633521 Azoarcus rhizosphaerae CC-YHH848 Isolate Rhizosphere
9 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
10 2900577576 Ralstonia sp. TCR112 Isolate Rhizosphere
11 2928058823 Ralstonia sp. 1138 Isolate Unclassified
12 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
13 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
14 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified
15 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
16 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
27 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
28 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
29 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
40 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
41 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
42 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
43 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
44 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
45 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
46 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
47 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
48 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
49 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
50 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
51 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
52 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
53 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
54 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
55 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
56 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
57 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
58 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
59 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
60 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
61 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
62 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
63 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
64 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
65 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
66 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
69 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
70 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
71 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
72 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
73 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
74 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
75 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
76 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
77 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
78 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
79 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
82 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
83 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
84 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
85 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
86 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
87 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
95 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
96 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
97 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
98 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
99 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
100 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
101 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
102 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
103 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
105 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
106 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
107 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
108 639633007 Azoarcus olearius BH72 Isolate Unclassified
109 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified
110 8002060224 Methylocystis sp. Sn-Cys Isolate Unclassified
111 8056137416 Pseudomonas fakonensis COW40 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.68
Metatranscriptomes 7.66
Isolates 7.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.35
Rhizosphere 81.98
Stem 0
Stem Tuber 0
Unclassified 16.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2366369 2162886007 Bacteria 1470
2 rootH1_10029019 3300003323 Bacteria 5489
3 rootH1_10031907 3300003323 Bacteria 30043
4 Ga0065704_10095244 3300005289 Bacteria 2498
5 Ga0070689_100007131 3300005340 Bacteria 7790
6 Ga0070669_100034324 3300005353 Bacteria 3673
7 Ga0070669_100510018 3300005353 Bacteria 998
8 Ga0070700_100442008 3300005441 Bacteria 987
9 Ga0070664_100202447 3300005564 Bacteria 1772
10 Ga0068857_100012916 3300005577 Bacteria 7276
11 Ga0068859_100725936 3300005617 Bacteria 1083
12 Ga0068861_100084994 3300005719 Bacteria 2485
13 Ga0075429_100005760 3300006880 Bacteria 10698
14 Ga0097620_100725881 3300006931 Bacteria 1083
15 Ga0105251_10060928 3300009011 Bacteria 1775
16 Ga0105244_10162742 3300009036 Bacteria 1065
17 Ga0157375_10086285 3300013308 Bacteria 3189
18 Ga0207655_1026646 3300025728 Bacteria 2772
19 Ga0207713_1054116 3300025735 Bacteria 1576
20 Ga0207681_10007397 3300025923 Bacteria 6725
21 Ga0207686_10189648 3300025934 Bacteria 1464
22 Ga0207670_10022470 3300025936 Bacteria 3910
23 Ga0207691_10013225 3300025940 Bacteria 7904
24 Ga0207679_10164570 3300025945 Bacteria 1820
25 Ga0207708_10087761 3300026075 Bacteria 2395
26 Ga0207674_10052211 3300026116 Bacteria 4169
27 Ga0209371_1000106 3300027312 Bacteria 146212
28 Ga0265318_10069253 3300028577 Bacteria 1308
29 Ga0268256_1000077 3300030500 Bacteria 177593
30 Ga0265332_10004893 3300031238 Bacteria 6229
31 Ga0265328_10006166 3300031239 Bacteria 5100
32 Ga0265328_10105833 3300031239 Bacteria 1044
33 Ga0265331_10002484 3300031250 Bacteria 12461
34 Ga0265331_10246646 3300031250 Bacteria 801
35 Ga0265327_10000002 3300031251 Bacteria 856593
36 Ga0265327_10000742 3300031251 Bacteria 50671
37 Ga0265327_10002682 3300031251 Bacteria 18266
38 Ga0265327_10002877 3300031251 Bacteria 17313
39 Ga0265327_10008485 3300031251 Bacteria 7640
40 Ga0265327_10036294 3300031251 Bacteria 2711
41 Ga0265327_10078488 3300031251 Bacteria 1636
42 Ga0265316_10000003 3300031344 Bacteria 323632
43 Ga0265316_10001311 3300031344 Bacteria 26774
44 Ga0265316_10005354 3300031344 Bacteria 12497
45 Ga0307513_10245246 3300031456 Bacteria 1592
46 Ga0307408_100000005 3300031548 Bacteria 529098
47 Ga0307408_100000262 3300031548 Bacteria 53492
48 Ga0316575_10027288 3300031665 Bacteria 2222
49 Ga0316575_10031188 3300031665 Bacteria 2086
50 Ga0316575_10045221 3300031665 Bacteria 1748
51 Ga0316575_10111863 3300031665 Bacteria 1114
52 Ga0316579_10000622 3300031691 Bacteria 12003
53 Ga0316579_10001066 3300031691 Bacteria 9707
54 Ga0316579_10003552 3300031691 Bacteria 6102
55 Ga0316579_10005031 3300031691 Bacteria 5304
56 Ga0316579_10063699 3300031691 Bacteria 1738
57 Ga0316579_10215508 3300031691 Bacteria 928
58 Ga0316579_10302234 3300031691 Bacteria 774
59 Ga0316576_10026824 3300031727 Bacteria 4046
60 Ga0316576_10047754 3300031727 Bacteria 3103
61 Ga0316576_10054778 3300031727 Bacteria 2909
62 Ga0316576_10066160 3300031727 Bacteria 2657
63 Ga0316576_10166243 3300031727 Bacteria 1664
64 Ga0316576_10467107 3300031727 Bacteria 931
65 Ga0316578_10011703 3300031728 Bacteria 4603
66 Ga0316578_10035558 3300031728 Bacteria 2864
67 Ga0316578_10075682 3300031728 Bacteria 1997
68 Ga0316578_10088842 3300031728 Bacteria 1844
69 Ga0316578_10183902 3300031728 Bacteria 1259
70 Ga0316578_10250571 3300031728 Bacteria 1062
71 Ga0316577_10008626 3300031733 Bacteria 5467
72 Ga0316577_10044440 3300031733 Bacteria 2484
73 Ga0316577_10165444 3300031733 Bacteria 1248
74 Ga0316577_10184952 3300031733 Bacteria 1177
75 Ga0316577_10301925 3300031733 Bacteria 907
76 Ga0307406_10000030 3300031901 Bacteria 87564
77 Ga0316583_10000501 3300032133 Bacteria 11732
78 Ga0316583_10019781 3300032133 Bacteria 2414
79 Ga0316583_10034021 3300032133 Bacteria 1808
80 Ga0316583_10086831 3300032133 Bacteria 1092
81 Ga0316585_10021733 3300032137 Bacteria 1971
82 Ga0316585_10040558 3300032137 Bacteria 1483
83 Ga0316585_10155321 3300032137 Bacteria 755
84 Ga0316580_10007004 3300032139 Bacteria 3343
85 Ga0316593_10000324 3300032168 Bacteria 8226
86 Ga0316593_10004055 3300032168 Bacteria 3712
87 Ga0316593_10013804 3300032168 Bacteria 2398
88 Ga0316593_10025405 3300032168 Bacteria 1886
89 Ga0316593_10037665 3300032168 Bacteria 1599
90 Ga0316593_10079877 3300032168 Bacteria 1140
91 Ga0316593_10103689 3300032168 Bacteria 1011
92 Ga0316593_10103962 3300032168 Bacteria 1010
93 Ga0316592_1026025 3300033524 Bacteria 1262
94 Ga0316586_1003833 3300033527 Bacteria 2007
95 Ga0316586_1046769 3300033527 Bacteria 769
96 Ga0316588_1010281 3300033528 Bacteria 1969
97 Ga0316587_1038319 3300033529 Bacteria 861
98 Ga0316596_1000238 3300033541 Bacteria 8353
99 Ga0316596_1046071 3300033541 Bacteria 1151
100 Ga0316596_1049277 3300033541 Bacteria 1114
101 Ga0316596_1120129 3300033541 Bacteria 715
102 Ga0316574_0000790 3300035398 Bacteria 13733
103 Ga0316574_0005184 3300035398 Bacteria 6932
104 Ga0316574_0008753 3300035398 Bacteria 5636
105 Ga0316574_0171861 3300035398 Bacteria 1395
106 Ga0316574_0192073 3300035398 Unclassified 1313
107 Ga0316574_0241062 3300035398 Bacteria 1156
108 Ga0316574_0265554 3300035398 Bacteria 1095
109 Ga0316574_0280755 3300035398 Bacteria 1061
110 Ga0316582_0003340 3300036647 Bacteria 7845
111 Ga0316582_0015704 3300036647 Bacteria 4340
112 Ga0316582_0026123 3300036647 Bacteria 3513
113 Ga0316582_0041279 3300036647 Bacteria 2883
114 Ga0316582_0103889 3300036647 Bacteria 1884
115 Ga0316582_0196009 3300036647 Bacteria 1377
116 Ga0316582_0196200 3300036647 Bacteria 1376
117 Ga0316582_0209840 3300036647 Bacteria 1330
118 Ga0316582_0346610 3300036647 Unclassified 1022
119 Ga0316582_0598933 3300036647 Bacteria 759
120 Ga0316584_0001110 3300036712 Bacteria 15765
121 Ga0316584_0002755 3300036712 Bacteria 11245
122 Ga0316584_0009310 3300036712 Bacteria 6813
123 Ga0316584_0024789 3300036712 Bacteria 4393
124 Ga0316584_0046878 3300036712 Bacteria 3228
125 Ga0316584_0056422 3300036712 Bacteria 2940
126 Ga0316584_0105777 3300036712 Bacteria 2106
127 Ga0316584_0117345 3300036712 Bacteria 1990
128 Ga0316584_0133154 3300036712 Bacteria 1856
129 Ga0316584_0144777 3300036712 Bacteria 1771
130 Ga0316584_0233380 3300036712 Bacteria 1348
131 Ga0316584_0320919 3300036712 Bacteria 1117
132 Ga0316584_0441879 3300036712 Bacteria 921
133 Ga0316584_0512409 3300036712 Bacteria 841
134 Ga0316584_0534643 3300036712 Bacteria 820
135 Ga0316581_0000544 3300037588 Bacteria 7361
136 Ga0316581_0020894 3300037588 Bacteria 1920
137 Ga0316581_0070389 3300037588 Bacteria 1074
138 Ga0395901_0012912 3300038443 Bacteria 8472
139 Ga0400484_36490 3300038725 Bacteria 5951
140 Ga0400490_08715 3300038726 Bacteria 7804
141 Ga0400490_14322 3300038726 Bacteria 1050
142 Ga0400488_51077 3300038741 Bacteria 1595
143 Ga0400488_54991 3300038741 Bacteria 5244
144 Ga0400486_28804 3300038742 Bacteria 1772
145 Ga0400483_018941 3300039062 Bacteria 3903
146 Ga0400483_064087 3300039062 Bacteria 11379
147 Ga0400483_076602 3300039062 Bacteria 21101
148 Ga0400483_100414 3300039062 Bacteria 7603
149 Ga0400483_143819 3300039062 Bacteria 3183
150 Ga0400483_145436 3300039062 Bacteria 7309
151 Ga0400483_163720 3300039062 Bacteria 30075
152 Ga0400483_177181 3300039062 Bacteria 1672
153 Ga0400483_245917 3300039062 Bacteria 8457
154 Ga0400483_275750 3300039062 Bacteria 1620
155 Ga0400483_281087 3300039062 Bacteria 7542
156 Ga0400487_66425 3300039110 Bacteria 1735
157 Ga0450891_000371 3300042129 Bacteria 4708
158 Ga0451577_0000096 3300042876 Bacteria 195129
159 Ga0451577_0138969 3300042876 Bacteria 2182
160 Ga0451577_0396286 3300042876 Bacteria 1253
161 Ga0466969_0135886 3300044656 Bacteria 1138
162 Ga0453683_0020811 3300044673 Bacteria 4191
163 Ga0453684_0003157 3300044712 Bacteria 37940
164 Ga0453684_0042434 3300044712 Bacteria 6132
165 Ga0453684_0968845 3300044712 Bacteria 906
166 Ga0453684_1257973 3300044712 Bacteria 774
167 Ga0451576_0000200 3300045051 Bacteria 150230
168 Ga0451576_0012266 3300045051 Bacteria 9647
169 Ga0451576_0025428 3300045051 Bacteria 6377
170 Ga0451576_0397110 3300045051 Bacteria 1446
171 Ga0451576_0941649 3300045051 Bacteria 906
172 Ga0466967_0164317 3300045976 Bacteria 2085
173 Ga0495607_0080956 3300046501 Bacteria 1784
174 Ga0496110_0606064 3300048913 Bacteria 993
175 Ga0496113_0033711 3300048916 Bacteria 3731
176 Ga0496122_0000612 3300048925 Bacteria 73307
177 Ga0496122_0020347 3300048925 Bacteria 6000
178 Ga0496123_0000274 3300048926 Bacteria 101783
179 Ga0496123_0089937 3300048926 Bacteria 1827
180 Ga0496125_0001638 3300048928 Bacteria 31567
181 Ga0501034_0148612 3300049571 Bacteria 2319
182 Ga0501034_0486670 3300049571 Bacteria 1149
183 Ga0501037_0211475 3300049573 Bacteria 1367
184 Ga0501038_0001822 3300049574 Bacteria 19745
185 Ga0501039_0154433 3300049575 Bacteria 1803
186 Ga0501043_0096419 3300049579 Bacteria 2324
187 Ga0501046_0076525 3300049580 Bacteria 2592
188 Ga0501047_0035373 3300049581 Bacteria 4825
189 Ga0501047_0520167 3300049581 Bacteria 1016
190 Ga0501070_0112516 3300049586 Bacteria 2250
191 Ga0501073_0001770 3300049589 Bacteria 16060
192 Ga0501074_0018070 3300049590 Bacteria 5123
193 Ga0501227_063659 3300049665 Bacteria 949
194 Ga0501230_014103 3300049667 Bacteria 1307
195 Ga0501079_0267100 3300049741 Bacteria 1337
196 Ga0501080_0789942 3300049742 Bacteria 833
197 Ga0501083_0179985 3300049744 Bacteria 1381
198 Ga0501241_013639 3300049758 Bacteria 1477
199 Ga0501241_025558 3300049758 Bacteria 1100
200 Ga0501035_0020342 3300049822 Bacteria 6094
201 Ga0501044_0029893 3300049823 Bacteria 5744
202 Ga0501044_0665244 3300049823 Bacteria 929
203 nmdc:mga09592_1310_c1 3300050508 Bacteria 19982
204 Ga0501084_0346713 3300054114 Bacteria 1254
205 Ga0501082_0060180 3300060353 Bacteria 3271

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048913 Ga0496110_0606064 Ga0496110_0606064_270_899 181
2 3300005340 Ga0070689_100007131 Ga0070689_1000071314 182
3 3300005353 Ga0070669_100510018 Ga0070669_1005100181 182
4 3300005441 Ga0070700_100442008 Ga0070700_1004420082 182
5 3300005564 Ga0070664_100202447 Ga0070664_1002024472 182
6 3300005577 Ga0068857_100012916 Ga0068857_1000129168 182
7 3300005719 Ga0068861_100084994 Ga0068861_1000849943 182
8 3300013308 Ga0157375_10086285 Ga0157375_100862853 182
9 3300025936 Ga0207670_10022470 Ga0207670_100224703 182
10 3300025940 Ga0207691_10013225 Ga0207691_100132252 182
11 3300025945 Ga0207679_10164570 Ga0207679_101645702 182
12 3300026075 Ga0207708_10087761 Ga0207708_100877614 182
13 3300026116 Ga0207674_10052211 Ga0207674_100522112 182
14 3300031691 Ga0316579_10215508 Ga0316579_102155081 182
15 3300039062 Ga0400483_143819 Ga0400483_143819_1910_2500 182
16 3300039062 Ga0400483_275750 Ga0400483_275750_264_854 182
17 3300042129 Ga0450891_000371 Ga0450891_000371_1748_2296 182
18 3300048916 Ga0496113_0033711 Ga0496113_0033711_1860_2453 182
19 3300031728 Ga0316578_10183902 Ga0316578_101839022 184
20 3300033541 Ga0316596_1046071 Ga0316596_10460712 184
21 3300031251 Ga0265327_10000742 Ga0265327_100007426 185
22 3300031665 Ga0316575_10031188 Ga0316575_100311883 185
23 3300031727 Ga0316576_10166243 Ga0316576_101662432 185
24 3300031733 Ga0316577_10044440 Ga0316577_100444402 185
25 3300032139 Ga0316580_10007004 Ga0316580_100070043 185
26 3300032168 Ga0316593_10004055 Ga0316593_100040551 185
27 3300032168 Ga0316593_10037665 Ga0316593_100376652 185
28 3300033527 Ga0316586_1003833 Ga0316586_10038333 185
29 3300035398 Ga0316574_0008753 Ga0316574_0008753_352_957 185
30 3300036647 Ga0316582_0103889 Ga0316582_0103889_145_750 185
31 3300036712 Ga0316584_0512409 Ga0316584_0512409_187_792 185
32 3300037588 Ga0316581_0020894 Ga0316581_0020894_653_1258 185
33 3300033524 Ga0316592_1026025 Ga0316592_10260252 187
34 3300049571 Ga0501034_0486670 Ga0501034_0486670_47_619 190
35 iso_pu_bacteria 2891633521 2891635464 191
36 iso_pu_bacteria 8002060224 8002062448 191
37 iso_pu_bacteria 2596583598 2597031589 192
38 iso_pu_bacteria 2599185178 2599448054 192
39 iso_pu_bacteria 2900577576 2900580408 192
40 iso_pu_bacteria 2928058823 2928063669 192
41 3300036647 Ga0316582_0041279 Ga0316582_0041279_1970_2554 193
42 3300036647 Ga0316582_0346610 Ga0316582_0346610_352_936 193
43 3300036647 Ga0316582_0598933 Ga0316582_0598933_104_688 193
44 3300036712 Ga0316584_0144777 Ga0316584_0144777_107_691 193
45 iso_pu_bacteria 2738541276 2738714174 193
46 iso_pu_bacteria 2894510363 2894510484 193
47 iso_pu_bacteria 2989392574 2989393698 193
48 iso_pu_bacteria 8056137416 8056137752 193
49 3300031238 Ga0265332_10004893 Ga0265332_100048933 195
50 3300031239 Ga0265328_10006166 Ga0265328_100061667 195
51 3300031251 Ga0265327_10036294 Ga0265327_100362942 195
52 3300042876 Ga0451577_0396286 Ga0451577_0396286_148_735 195
53 3300044673 Ga0453683_0020811 Ga0453683_0020811_777_1364 195
54 3300044712 Ga0453684_0042434 Ga0453684_0042434_5326_5913 195
55 3300044712 Ga0453684_1257973 Ga0453684_1257973_82_669 195
56 3300045051 Ga0451576_0012266 Ga0451576_0012266_6617_7204 195
57 3300045051 Ga0451576_0025428 Ga0451576_0025428_5005_5592 195
58 3300005617 Ga0068859_100725936 Ga0068859_1007259362 196
59 3300006931 Ga0097620_100725881 Ga0097620_1007258812 196
60 3300031239 Ga0265328_10105833 Ga0265328_101058332 196
61 3300031250 Ga0265331_10002484 Ga0265331_100024845 196
62 3300031251 Ga0265327_10008485 Ga0265327_100084858 196
63 3300031665 Ga0316575_10045221 Ga0316575_100452213 196
64 3300031665 Ga0316575_10111863 Ga0316575_101118632 196
65 3300031691 Ga0316579_10302234 Ga0316579_103022341 196
66 3300031728 Ga0316578_10035558 Ga0316578_100355583 196
67 3300031728 Ga0316578_10075682 Ga0316578_100756823 196
68 3300033527 Ga0316586_1046769 Ga0316586_10467691 196
69 3300035398 Ga0316574_0000790 Ga0316574_0000790_7785_8375 196
70 3300035398 Ga0316574_0005184 Ga0316574_0005184_2068_2658 196
71 3300036647 Ga0316582_0026123 Ga0316582_0026123_15_605 196
72 3300038725 Ga0400484_36490 Ga0400484_36490_3231_3821 196
73 3300038726 Ga0400490_08715 Ga0400490_08715_6316_6906 196
74 3300038726 Ga0400490_14322 Ga0400490_14322_144_734 196
75 3300038741 Ga0400488_51077 Ga0400488_51077_629_1219 196
76 3300038741 Ga0400488_54991 Ga0400488_54991_2295_2885 196
77 3300038742 Ga0400486_28804 Ga0400486_28804_280_870 196
78 3300039062 Ga0400483_100414 Ga0400483_100414_1979_2569 196
79 3300039062 Ga0400483_163720 Ga0400483_163720_1052_1642 196
80 3300039062 Ga0400483_177181 Ga0400483_177181_80_670 196
81 3300003323 rootH1_10029019 rootH1_100290192 197
82 3300003323 rootH1_10031907 rootH1_1003190718 197
83 3300009011 Ga0105251_10060928 Ga0105251_100609282 197
84 3300025728 Ga0207655_1026646 Ga0207655_10266462 197
85 3300025735 Ga0207713_1054116 Ga0207713_10541162 197
86 3300028577 Ga0265318_10069253 Ga0265318_100692532 197
87 3300031250 Ga0265331_10246646 Ga0265331_102466461 197
88 3300031251 Ga0265327_10000002 Ga0265327_10000002646 197
89 3300031251 Ga0265327_10002682 Ga0265327_1000268210 197
90 3300031251 Ga0265327_10002877 Ga0265327_1000287719 197
91 3300031251 Ga0265327_10078488 Ga0265327_100784883 197
92 3300031344 Ga0265316_10001311 Ga0265316_1000131125 197
93 3300031344 Ga0265316_10005354 Ga0265316_1000535413 197
94 3300031665 Ga0316575_10027288 Ga0316575_100272883 197
95 3300031691 Ga0316579_10000622 Ga0316579_1000062213 197
96 3300031691 Ga0316579_10001066 Ga0316579_100010664 197
97 3300031691 Ga0316579_10003552 Ga0316579_100035526 197
98 3300031691 Ga0316579_10005031 Ga0316579_100050314 197
99 3300031691 Ga0316579_10063699 Ga0316579_100636992 197
100 3300031727 Ga0316576_10026824 Ga0316576_100268243 197
101 3300031727 Ga0316576_10047754 Ga0316576_100477541 197
102 3300031727 Ga0316576_10054778 Ga0316576_100547782 197
103 3300031727 Ga0316576_10467107 Ga0316576_104671072 197
104 3300031728 Ga0316578_10011703 Ga0316578_100117034 197
105 3300031728 Ga0316578_10088842 Ga0316578_100888422 197
106 3300031728 Ga0316578_10250571 Ga0316578_102505711 197
107 3300031733 Ga0316577_10008626 Ga0316577_100086266 197
108 3300031733 Ga0316577_10165444 Ga0316577_101654442 197
109 3300031733 Ga0316577_10184952 Ga0316577_101849522 197
110 3300031733 Ga0316577_10301925 Ga0316577_103019252 197
111 3300032133 Ga0316583_10000501 Ga0316583_100005015 197
112 3300032133 Ga0316583_10019781 Ga0316583_100197812 197
113 3300032133 Ga0316583_10034021 Ga0316583_100340211 197
114 3300032133 Ga0316583_10086831 Ga0316583_100868311 197
115 3300032137 Ga0316585_10021733 Ga0316585_100217332 197
116 3300032137 Ga0316585_10040558 Ga0316585_100405582 197
117 3300032168 Ga0316593_10025405 Ga0316593_100254052 197
118 3300032168 Ga0316593_10079877 Ga0316593_100798772 197
119 3300033529 Ga0316587_1038319 Ga0316587_10383192 197
120 3300033541 Ga0316596_1049277 Ga0316596_10492771 197
121 3300035398 Ga0316574_0171861 Ga0316574_0171861_185_778 197
122 3300035398 Ga0316574_0192073 Ga0316574_0192073_374_967 197
123 3300035398 Ga0316574_0241062 Ga0316574_0241062_149_742 197
124 3300035398 Ga0316574_0265554 Ga0316574_0265554_83_676 197
125 3300035398 Ga0316574_0280755 Ga0316574_0280755_95_688 197
126 3300036647 Ga0316582_0003340 Ga0316582_0003340_1776_2369 197
127 3300036647 Ga0316582_0015704 Ga0316582_0015704_1230_1823 197
128 3300036647 Ga0316582_0196200 Ga0316582_0196200_485_1078 197
129 3300036647 Ga0316582_0209840 Ga0316582_0209840_162_755 197
130 3300036712 Ga0316584_0001110 Ga0316584_0001110_2583_3176 197
131 3300036712 Ga0316584_0002755 Ga0316584_0002755_2477_3070 197
132 3300036712 Ga0316584_0009310 Ga0316584_0009310_4178_4816 197
133 3300036712 Ga0316584_0024789 Ga0316584_0024789_1975_2568 197
134 3300036712 Ga0316584_0046878 Ga0316584_0046878_1898_2491 197
135 3300036712 Ga0316584_0056422 Ga0316584_0056422_2337_2930 197
136 3300036712 Ga0316584_0105777 Ga0316584_0105777_34_627 197
137 3300036712 Ga0316584_0117345 Ga0316584_0117345_558_1151 197
138 3300036712 Ga0316584_0233380 Ga0316584_0233380_324_917 197
139 3300036712 Ga0316584_0320919 Ga0316584_0320919_52_645 197
140 3300036712 Ga0316584_0441879 Ga0316584_0441879_75_668 197
141 3300036712 Ga0316584_0534643 Ga0316584_0534643_131_724 197
142 3300037588 Ga0316581_0000544 Ga0316581_0000544_2591_3184 197
143 3300037588 Ga0316581_0070389 Ga0316581_0070389_304_897 197
144 3300039062 Ga0400483_018941 Ga0400483_018941_2133_2726 197
145 3300039062 Ga0400483_064087 Ga0400483_064087_648_1241 197
146 3300039062 Ga0400483_076602 Ga0400483_076602_6651_7244 197
147 3300039062 Ga0400483_281087 Ga0400483_281087_1099_1692 197
148 3300042876 Ga0451577_0000096 Ga0451577_0000096_81577_82170 197
149 3300042876 Ga0451577_0138969 Ga0451577_0138969_97_690 197
150 3300044712 Ga0453684_0003157 Ga0453684_0003157_37173_37766 197
151 3300044712 Ga0453684_0968845 Ga0453684_0968845_274_867 197
152 3300045051 Ga0451576_0000200 Ga0451576_0000200_94556_95149 197
153 3300045051 Ga0451576_0397110 Ga0451576_0397110_667_1260 197
154 3300045051 Ga0451576_0941649 Ga0451576_0941649_29_622 197
155 3300046501 Ga0495607_0080956 Ga0495607_0080956_812_1405 197
156 3300049571 Ga0501034_0148612 Ga0501034_0148612_285_905 197
157 3300049573 Ga0501037_0211475 Ga0501037_0211475_266_886 197
158 3300049574 Ga0501038_0001822 Ga0501038_0001822_17444_18064 197
159 3300049575 Ga0501039_0154433 Ga0501039_0154433_1110_1730 197
160 3300049579 Ga0501043_0096419 Ga0501043_0096419_1566_2186 197
161 3300049580 Ga0501046_0076525 Ga0501046_0076525_240_860 197
162 3300049581 Ga0501047_0035373 Ga0501047_0035373_3249_3869 197
163 3300049581 Ga0501047_0520167 Ga0501047_0520167_404_997 197
164 3300049586 Ga0501070_0112516 Ga0501070_0112516_61_681 197
165 3300049589 Ga0501073_0001770 Ga0501073_0001770_141_761 197
166 3300049590 Ga0501074_0018070 Ga0501074_0018070_1577_2197 197
167 3300049665 Ga0501227_063659 Ga0501227_063659_87_680 197
168 3300049667 Ga0501230_014103 Ga0501230_014103_579_1172 197
169 3300049741 Ga0501079_0267100 Ga0501079_0267100_580_1200 197
170 3300049742 Ga0501080_0789942 Ga0501080_0789942_152_745 197
171 3300049744 Ga0501083_0179985 Ga0501083_0179985_585_1205 197
172 3300049822 Ga0501035_0020342 Ga0501035_0020342_5368_5988 197
173 3300049823 Ga0501044_0029893 Ga0501044_0029893_1524_2144 197
174 3300049823 Ga0501044_0665244 Ga0501044_0665244_320_913 197
175 3300054114 Ga0501084_0346713 Ga0501084_0346713_252_872 197
176 3300060353 Ga0501082_0060180 Ga0501082_0060180_727_1347 197
177 3300006880 Ga0075429_100005760 Ga0075429_10000576010 198
178 3300032137 Ga0316585_10155321 Ga0316585_101553211 198
179 3300032168 Ga0316593_10000324 Ga0316593_100003244 198
180 3300033541 Ga0316596_1000238 Ga0316596_10002388 198
181 3300036647 Ga0316582_0196009 Ga0316582_0196009_58_663 198
182 3300038443 Ga0395901_0012912 Ga0395901_0012912_304_900 198
183 3300044656 Ga0466969_0135886 Ga0466969_0135886_505_1101 198
184 3300045976 Ga0466967_0164317 Ga0466967_0164317_1410_2006 198
185 3300049758 Ga0501241_013639 Ga0501241_013639_220_816 198
186 3300050508 nmdc:mga09592_1310_c1 nmdc:mga09592_1310_c1_2405_3001 198
187 iso_pu_bacteria 8001522603 8001523669 198
188 3300031344 Ga0265316_10000003 Ga0265316_1000000392 199
189 3300033541 Ga0316596_1120129 Ga0316596_11201291 201
190 3300039062 Ga0400483_145436 Ga0400483_145436_2867_3493 201
191 3300039062 Ga0400483_245917 Ga0400483_245917_7061_7687 201
192 iso_pu_bacteria 2842747753 2842748916 201
193 iso_pu_bacteria 2932422444 2932423995 202
194 3300027312 Ga0209371_1000106 Ga0209371_100010613 203
195 3300030500 Ga0268256_1000077 Ga0268256_100007713 203
196 3300031456 Ga0307513_10245246 Ga0307513_102452461 203
197 3300031548 Ga0307408_100000005 Ga0307408_100000005216 203
198 3300031548 Ga0307408_100000262 Ga0307408_10000026243 203
199 3300031727 Ga0316576_10066160 Ga0316576_100661603 203
200 3300031901 Ga0307406_10000030 Ga0307406_1000003028 203
201 3300032168 Ga0316593_10103689 Ga0316593_101036892 203
202 3300032168 Ga0316593_10103962 Ga0316593_101039622 203
203 3300033528 Ga0316588_1010281 Ga0316588_10102813 203
204 3300036712 Ga0316584_0133154 Ga0316584_0133154_1125_1745 203
205 3300039110 Ga0400487_66425 Ga0400487_66425_616_1260 203
206 3300049758 Ga0501241_025558 Ga0501241_025558_207_818 203
207 iso_pu_bacteria 639633007 639788509 203
208 3300005353 Ga0070669_100034324 Ga0070669_1000343243 204
209 3300025923 Ga0207681_10007397 Ga0207681_100073974 204
210 3300032168 Ga0316593_10013804 Ga0316593_100138043 204
211 3300048925 Ga0496122_0000612 Ga0496122_0000612_56780_57409 204
212 3300048926 Ga0496123_0000274 Ga0496123_0000274_44387_45016 204
213 iso_pu_bacteria 2842718218 2842718664 204
214 iso_pu_bacteria 2928115317 2928118031 205
215 iso_pu_bacteria 2547132374 2548499072 207
216 3300009036 Ga0105244_10162742 Ga0105244_101627421 208
217 3300025934 Ga0207686_10189648 Ga0207686_101896482 208
218 2162886007 SwRhRL2b_contig_2366369 SwRhRL2b_0228.00001320 210
219 3300005289 Ga0065704_10095244 Ga0065704_100952443 210
220 3300048925 Ga0496122_0020347 Ga0496122_0020347_5135_5767 210
221 3300048926 Ga0496123_0089937 Ga0496123_0089937_536_1168 210
222 3300048928 Ga0496125_0001638 Ga0496125_0001638_23191_23823 210

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00475

IGPD

Imidazoleglycerol-phosphate dehydratase

60

203

1

Structural Annotation

Top 5 Hits

ID Description Score Start End
2f1d-assembly1.cif.gz_D x-ray structure of imidazoleglycerol-phosphate dehydratase 0.993 17 198
4mu0-assembly1.cif.gz_A the structure of wt a. thaliana igpd2 in complex with mn2+ and 1,2,4-triazole at 1.3 a resolution 0.9896 15 198
4mu3-assembly1.cif.gz_A the form a structure of an e21q catalytic mutant of a. thaliana igpd2 in complex with mn2+ and a mixture of its substrate, 2r3s-igp, and an inhibitor, 2s3s-igp, to 1.12 a resolution 0.9876 15 200
7oj5-assembly1.cif.gz_A cryo-em structure of medicago truncatula hisn5 protein 0.9862 16 198
4mu3-assembly1.cif.gz_A the form a structure of an e21q catalytic mutant of a. thaliana igpd2 in complex with mn2+ and a mixture of its substrate, 2r3s-igp, and an inhibitor, 2s3s-igp, to 1.12 a resolution 0.9824 15 200
ID Description Score Start End Superfamily
2f1dA02 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Imidazole glycerol phosphate dehydratase; domain 1 0.9863 105 198 3.30.230.40
2ae8A02 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Imidazole glycerol phosphate dehydratase; domain 1 0.9851 105 196 3.30.230.40
4qnkD01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Imidazole glycerol phosphate dehydratase; domain 1 0.9845 15 103 3.30.230.40
1rhyA02 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Imidazole glycerol phosphate dehydratase; domain 1 0.9772 105 195 3.30.230.40
2f1dA02 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Imidazole glycerol phosphate dehydratase; domain 1 0.976 105 198 3.30.230.40
ID Description Score Start End GO Terms
AF-A0A3D0LTM6-F1-model_v4 Imidazoleglycerol-phosphate dehydratase 1.007 18 85 GO:0000105
GO:0004424
AF-A0A522GSK4-F1-model_v4 Imidazoleglycerol-phosphate dehydratase 1.003 18 92 GO:0000105
GO:0004424
AF-A0A3S4I3K5-F1-model_v4 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) 1.003 17 91 GO:0000105
GO:0004424
AF-A0A431KDM2-F1-model_v4 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) 1.002 17 197 GO:0000105
GO:0004424
GO:0005737
AF-A0A0F9G6W2-F1-model_v4 Imidazoleglycerol-phosphate dehydratase 1.002 16 112 GO:0000105
GO:0004424

Feature Viewer

pLDDT pTM Quality
91.14 0.89 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map