F335012

General Info

Members Datasets Scaffolds Average Seq Length
222 147 215 285

Family's Representative Sequence

Representative Sequence 3300053117|Ga0500593_020249|Ga0500593_020249_353_1324
Length 323
Sequence MTLDLIETKAPASPDGTGASEISVKAVVSSAAARATSGSTRKPDFVLTLYCEDRIGIVHAVSGFLVAHRCNILDSAQFSERSTQTFFMRVAFSAENGPTHADLKTDFLTVAEQFKMTWQLHDSKVKPRVLIMVSRFGHCMNDLLFRYASGALDVEIPAIVSNHRDFYRMAASYDIPFHHMPVTAETKSGQEAKLLELIEHERIDLVILARYMQVLSNDMCRKLEGRAINIHHSFLPSFKGAKPYHQAHSRGVKLIGATAHYVTAELDEGPIIEQDVARVDHDLEPEELVAIGRDVEAVVLARAVRFHVERRVLPNGNRTVVFR

Samples

Sample ID Description Type Environment
1 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
2 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
3 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
4 2935847175 Bradyrhizobium sp. RT5a Isolate Nodule
5 2935864058 Bradyrhizobium sp. RT9a Isolate Nodule
6 2935992306 Bradyrhizobium sp. I1.7.5 Isolate Nodule
7 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
47 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
48 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
74 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
75 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
76 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
88 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
89 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
90 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
91 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
94 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
97 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
98 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
99 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
100 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
101 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
102 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
103 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
104 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
105 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
106 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
109 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
110 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
111 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
112 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
113 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
114 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
115 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
116 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
117 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
118 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
119 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
120 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
123 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
124 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
125 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
126 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
127 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
139 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
140 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
146 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
147 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.95
Metatranscriptomes 0.9
Isolates 3.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.35
Nodule 2.25
Rhizoplane 1.35
Rhizosphere 90.09
Stem 0
Stem Tuber 0
Unclassified 4.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10000726 3300005327 Bacteria 28475
2 Ga0070658_10126155 3300005327 Bacteria 2131
3 Ga0070658_10135355 3300005327 Bacteria 2055
4 Ga0070683_100350917 3300005329 Bacteria 1405
5 Ga0070670_100002957 3300005331 Bacteria 14082
6 Ga0068869_100000116 3300005334 Bacteria 38421
7 Ga0068869_100031913 3300005334 Bacteria 3709
8 Ga0070680_100000250 3300005336 Bacteria 35510
9 Ga0070680_100037767 3300005336 Bacteria 3903
10 Ga0070680_100234767 3300005336 Bacteria 1549
11 Ga0068868_100005936 3300005338 Bacteria 8613
12 Ga0068868_100031909 3300005338 Bacteria 4050
13 Ga0070660_100061294 3300005339 Bacteria 2921
14 Ga0070660_100108974 3300005339 Bacteria 2202
15 Ga0070668_100109127 3300005347 Bacteria 2202
16 Ga0070669_100063658 3300005353 Bacteria 2715
17 Ga0070659_100001100 3300005366 Bacteria 19732
18 Ga0070659_100001605 3300005366 Bacteria 16264
19 Ga0070667_100001161 3300005367 Bacteria 23918
20 Ga0070700_100015890 3300005441 Bacteria 4277
21 Ga0070663_100185569 3300005455 Bacteria 1616
22 Ga0070681_10000092 3300005458 Bacteria 66067
23 Ga0070681_10004326 3300005458 Bacteria 13499
24 Ga0070681_10172166 3300005458 Bacteria 2087
25 Ga0070681_10238803 3300005458 Bacteria 1731
26 Ga0070679_100000009 3300005530 Bacteria 191579
27 Ga0070679_100009712 3300005530 Bacteria 9102
28 Ga0070679_100015998 3300005530 Bacteria 7225
29 Ga0070679_100293218 3300005530 Bacteria 1578
30 Ga0070696_100071942 3300005546 Bacteria 2434
31 Ga0068855_100171728 3300005563 Bacteria 2455
32 Ga0068857_100040344 3300005577 Bacteria 4139
33 Ga0068854_100360848 3300005578 Bacteria 1192
34 Ga0068859_100012561 3300005617 Bacteria 8520
35 Ga0068864_100003473 3300005618 Bacteria 13013
36 Ga0068861_100000177 3300005719 Bacteria 33912
37 Ga0068863_100001421 3300005841 Bacteria 23716
38 Ga0068860_100011793 3300005843 Bacteria 8613
39 Ga0068862_100004869 3300005844 Bacteria 11305
40 Ga0097620_100012562 3300006931 Bacteria 8520
41 Ga0105240_10381990 3300009093 Bacteria 1591
42 Ga0105245_10499164 3300009098 Bacteria 1233
43 Ga0105248_10007894 3300009177 Bacteria 11695
44 Ga0105238_10288320 3300009551 Bacteria 1623
45 Ga0105238_10331341 3300009551 Bacteria 1509
46 Ga0105249_10637929 3300009553 Bacteria 1122
47 Ga0157371_10022281 3300013102 Bacteria 4645
48 Ga0157369_10000712 3300013105 Bacteria 42759
49 Ga0157369_10002272 3300013105 Bacteria 23114
50 Ga0157369_10021254 3300013105 Bacteria 7258
51 Ga0157369_10210739 3300013105 Bacteria 2037
52 Ga0157369_10423743 3300013105 Bacteria 1380
53 Ga0157378_10045185 3300013297 Bacteria 3913
54 Ga0163162_10098134 3300013306 Bacteria 3019
55 Ga0157372_10416808 3300013307 Bacteria 1565
56 Ga0157372_10598600 3300013307 Bacteria 1285
57 Ga0157375_10013714 3300013308 Bacteria 7224
58 Ga0163163_10012548 3300014325 Bacteria 7727
59 Ga0213872_10000222 3300021361 Bacteria 50284
60 Ga0213872_10002524 3300021361 Bacteria 10670
61 Ga0213872_10005842 3300021361 Bacteria 6247
62 Ga0213872_10027504 3300021361 Bacteria 2610
63 Ga0213876_10003641 3300021384 Bacteria 8760
64 Ga0224712_10000988 3300022467 Bacteria 6195
65 Ga0224712_10021061 3300022467 Bacteria 2225
66 Ga0207710_10127788 3300025900 Bacteria 1219
67 Ga0207645_10012864 3300025907 Bacteria 5664
68 Ga0207705_10000605 3300025909 Bacteria 30085
69 Ga0207707_10000174 3300025912 Bacteria 66915
70 Ga0207707_10012959 3300025912 Bacteria 7259
71 Ga0207660_10000526 3300025917 Bacteria 25575
72 Ga0207660_10215779 3300025917 Bacteria 1504
73 Ga0207660_10615766 3300025917 Bacteria 885
74 Ga0207657_10210491 3300025919 Bacteria 1561
75 Ga0207652_10000070 3300025921 Bacteria 109705
76 Ga0207652_10040285 3300025921 Bacteria 3967
77 Ga0207652_10196032 3300025921 Bacteria 1817
78 Ga0207652_10228615 3300025921 Bacteria 1676
79 Ga0207652_10437094 3300025921 Bacteria 1180
80 Ga0207652_10487601 3300025921 Bacteria 1110
81 Ga0207681_10036574 3300025923 Bacteria 3240
82 Ga0207650_10003967 3300025925 Bacteria 10129
83 Ga0207650_10009327 3300025925 Bacteria 6706
84 Ga0207687_10256183 3300025927 Bacteria 1393
85 Ga0207690_10000226 3300025932 Bacteria 42329
86 Ga0207690_10001742 3300025932 Bacteria 13356
87 Ga0207706_10095155 3300025933 Bacteria 2620
88 Ga0207686_10101099 3300025934 Bacteria 1925
89 Ga0207669_10064955 3300025937 Bacteria 2261
90 Ga0207711_10011646 3300025941 Bacteria 7306
91 Ga0207689_10000266 3300025942 Bacteria 47207
92 Ga0207689_10024543 3300025942 Bacteria 5057
93 Ga0207651_10329286 3300025960 Bacteria 1279
94 Ga0207640_10385777 3300025981 Bacteria 1136
95 Ga0207703_10003360 3300026035 Bacteria 13441
96 Ga0207676_10026324 3300026095 Bacteria 4326
97 Ga0207674_10034777 3300026116 Bacteria 5264
98 Ga0207675_100000618 3300026118 Bacteria 34762
99 Ga0307408_100015130 3300031548 Bacteria 5134
100 Ga0307508_10065718 3300031616 Eukaryota 3195
101 Ga0307516_10097823 3300031730 Eukaryota 2754
102 Ga0307405_10031739 3300031731 Bacteria 3113
103 Ga0307413_10006136 3300031824 Bacteria 5455
104 Ga0307410_10002502 3300031852 Bacteria 8878
105 Ga0307410_10282024 3300031852 Bacteria 1304
106 Ga0307406_10024519 3300031901 Bacteria 3604
107 Ga0307406_10140687 3300031901 Bacteria 1708
108 Ga0307407_10010925 3300031903 Bacteria 4301
109 Ga0307409_100012419 3300031995 Bacteria 5427
110 Ga0307409_100072063 3300031995 Bacteria 2750
111 Ga0307416_100003773 3300032002 Bacteria 8989
112 Ga0307414_10046904 3300032004 Bacteria 2970
113 Ga0307414_10228458 3300032004 Bacteria 1533
114 Ga0307411_10037789 3300032005 Bacteria 3039
115 Ga0307415_100049904 3300032126 Bacteria 2832
116 Ga0395900_0160566 3300037418 Bacteria 2293
117 Ga0395898_0300643 3300037466 Bacteria 1531
118 Ga0395905_0655765 3300037471 Bacteria 951
119 Ga0436365_0091426 3300039437 Bacteria 14932
120 Ga0436361_0023560 3300039447 Bacteria 13595
121 Ga0436361_0416549 3300039447 Bacteria 1128
122 Ga0436361_0420588 3300039447 Bacteria 967
123 Ga0436361_0471806 3300039447 Bacteria 922
124 Ga0436361_0485572 3300039447 Bacteria 18475
125 Ga0436361_0670010 3300039447 Bacteria 47567
126 Ga0436361_0883590 3300039447 Bacteria 1513
127 Ga0466961_0075615 3300044693 Bacteria 2135
128 Ga0466961_0115028 3300044693 Bacteria 1691
129 Ga0466961_0279288 3300044693 Bacteria 1022
130 Ga0466963_0082555 3300044694 Bacteria 2179
131 Ga0466963_0320798 3300044694 Bacteria 1090
132 Ga0466963_0407766 3300044694 Bacteria 958
133 Ga0466971_0012505 3300044719 Bacteria 3722
134 Ga0466957_0013648 3300044842 Bacteria 4715
135 Ga0466957_0236657 3300044842 Bacteria 1210
136 Ga0466959_0036014 3300045049 Bacteria 3657
137 Ga0466958_0000377 3300045836 Bacteria 18123
138 Ga0466958_0017071 3300045836 Bacteria 4190
139 Ga0466958_0028083 3300045836 Bacteria 3333
140 Ga0466958_0158261 3300045836 Bacteria 1430
141 Ga0466967_0044488 3300045976 Bacteria 3852
142 Ga0466967_0398376 3300045976 Bacteria 1339
143 Ga0495592_0017547 3300046454 Eukaryota 5439
144 Ga0495641_0002710 3300046461 Eukaryota 13759
145 Ga0495653_0166150 3300046463 Eukaryota 1527
146 Ga0495606_0030870 3300046507 Eukaryota 3736
147 Ga0495618_0011569 3300046514 Eukaryota 5355
148 Ga0495618_0027195 3300046514 Eukaryota 3561
149 Ga0495620_0001340 3300046515 Eukaryota 14955
150 Ga0495628_0009909 3300046516 Eukaryota 8113
151 Ga0495628_0012310 3300046516 Eukaryota 7211
152 Ga0495628_0099942 3300046516 Eukaryota 2240
153 Ga0495652_0000077 3300046529 Eukaryota 104432
154 Ga0495652_0004517 3300046529 Eukaryota 13276
155 Ga0495652_0018553 3300046529 Eukaryota 6201
156 Ga0495645_0079208 3300046543 Eukaryota 2360
157 Ga0495645_0193784 3300046543 Eukaryota 1383
158 Ga0495634_0013579 3300046642 Eukaryota 5883
159 Ga0495611_0088348 3300046648 Eukaryota 1431
160 Ga0495635_0254248 3300046663 Eukaryota 1184
161 Ga0495661_0006274 3300046665 Eukaryota 8361
162 Ga0495657_0002410 3300046675 Eukaryota 15741
163 Ga0495657_0152646 3300046675 Eukaryota 1433
164 Ga0495599_0002687 3300046678 Eukaryota 10373
165 Ga0495623_0082677 3300046679 Eukaryota 1984
166 Ga0495646_0026568 3300046680 Eukaryota 3634
167 Ga0495624_0033252 3300046690 Eukaryota 3340
168 Ga0495600_0051784 3300046809 Eukaryota 2680
169 Ga0495604_0039106 3300047317 Eukaryota 3729
170 Ga0495674_0004051 3300047319 Eukaryota 14176
171 Ga0495676_0005593 3300047321 Eukaryota 11534
172 Ga0495676_0118225 3300047321 Eukaryota 1933
173 Ga0495675_0066148 3300047444 Eukaryota 2285
174 Ga0495602_0001069 3300048088 Eukaryota 26873
175 Ga0495602_0010183 3300048088 Eukaryota 9760
176 Ga0495602_0010772 3300048088 Eukaryota 9478
177 Ga0495602_0017173 3300048088 Eukaryota 7257
178 Ga0496106_0175052 3300048909 Bacteria 1702
179 Ga0496109_0042663 3300048912 Bacteria 4110
180 Ga0496112_0402969 3300048915 Bacteria 1308
181 Ga0496117_0001437 3300048920 Bacteria 34356
182 Ga0496119_0000681 3300048922 Bacteria 45369
183 Ga0496120_0000674 3300048923 Bacteria 50098
184 Ga0496120_0006133 3300048923 Eukaryota 9322
185 Ga0496125_0237613 3300048928 Bacteria 1160
186 Ga0501031_0008086 3300049568 Bacteria 6850
187 Ga0501031_0164680 3300049568 Bacteria 1449
188 Ga0501034_0021055 3300049571 Bacteria 6654
189 Ga0501034_0442610 3300049571 Bacteria 1218
190 Ga0501036_0005815 3300049572 Bacteria 9985
191 Ga0501037_0000629 3300049573 Bacteria 27328
192 Ga0501037_0033285 3300049573 Bacteria 3807
193 Ga0501037_0140507 3300049573 Bacteria 1729
194 Ga0501037_0209051 3300049573 Bacteria 1377
195 Ga0501038_0005928 3300049574 Bacteria 11298
196 Ga0501040_0157919 3300049576 Bacteria 1602
197 Ga0501043_0008712 3300049579 Bacteria 7982
198 Ga0501046_0001866 3300049580 Bacteria 20049
199 Ga0501047_0116106 3300049581 Bacteria 2558
200 Ga0501048_0033219 3300049582 Bacteria 3729
201 Ga0501070_0005974 3300049586 Bacteria 10374
202 Ga0501070_0006904 3300049586 Bacteria 9662
203 Ga0501070_0020953 3300049586 Bacteria 5484
204 Ga0501070_0041100 3300049586 Bacteria 3852
205 Ga0501073_0106260 3300049589 Bacteria 1948
206 Ga0501074_0001493 3300049590 Bacteria 15746
207 Ga0501079_0000113 3300049741 Bacteria 41839
208 Ga0501083_0399954 3300049744 Bacteria 894
209 Ga0501035_0002164 3300049822 Bacteria 19502
210 Ga0501044_0022204 3300049823 Bacteria 6763
211 Ga0501044_0028715 3300049823 Bacteria 5868
212 Ga0501045_0037304 3300049824 Bacteria 3532
213 Ga0500593_020249 3300053117 Bacteria 2918
214 Ga0500607_000909 3300053121 Eukaryota 28438
215 Ga0500600_0001066 3300053149 Eukaryota 13981

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031616 Ga0307508_10065718 Ga0307508_100657182 238
2 3300031730 Ga0307516_10097823 Ga0307516_100978232 238
3 3300048928 Ga0496125_0237613 Ga0496125_0237613_76_939 252
4 3300009551 Ga0105238_10331341 Ga0105238_103313412 264
5 3300037471 Ga0395905_0655765 Ga0395905_0655765_86_892 264
6 3300005347 Ga0070668_100109127 Ga0070668_1001091272 267
7 3300005441 Ga0070700_100015890 Ga0070700_1000158904 267
8 3300025937 Ga0207669_10064955 Ga0207669_100649552 267
9 3300037418 Ga0395900_0160566 Ga0395900_0160566_836_1663 272
10 3300037466 Ga0395898_0300643 Ga0395898_0300643_267_1103 272
11 3300049744 Ga0501083_0399954 Ga0501083_0399954_21_845 273
12 3300044694 Ga0466963_0320798 Ga0466963_0320798_16_843 275
13 3300021384 Ga0213876_10003641 Ga0213876_100036415 279
14 3300039437 Ga0436365_0091426 Ga0436365_0091426_7535_8374 279
15 3300046516 Ga0495628_0099942 Ga0495628_0099942_1108_2046 279
16 3300005327 Ga0070658_10000726 Ga0070658_100007269 280
17 3300005327 Ga0070658_10126155 Ga0070658_101261552 280
18 3300005327 Ga0070658_10135355 Ga0070658_101353551 280
19 3300005329 Ga0070683_100350917 Ga0070683_1003509172 280
20 3300005331 Ga0070670_100002957 Ga0070670_10000295712 280
21 3300005334 Ga0068869_100000116 Ga0068869_10000011625 280
22 3300005334 Ga0068869_100031913 Ga0068869_1000319133 280
23 3300005336 Ga0070680_100000250 Ga0070680_10000025024 280
24 3300005336 Ga0070680_100037767 Ga0070680_1000377676 280
25 3300005336 Ga0070680_100234767 Ga0070680_1002347672 280
26 3300005338 Ga0068868_100005936 Ga0068868_1000059368 280
27 3300005338 Ga0068868_100031909 Ga0068868_1000319093 280
28 3300005339 Ga0070660_100061294 Ga0070660_1000612944 280
29 3300005339 Ga0070660_100108974 Ga0070660_1001089742 280
30 3300005353 Ga0070669_100063658 Ga0070669_1000636582 280
31 3300005366 Ga0070659_100001100 Ga0070659_1000011005 280
32 3300005366 Ga0070659_100001605 Ga0070659_1000016055 280
33 3300005367 Ga0070667_100001161 Ga0070667_10000116111 280
34 3300005455 Ga0070663_100185569 Ga0070663_1001855692 280
35 3300005458 Ga0070681_10000092 Ga0070681_1000009216 280
36 3300005458 Ga0070681_10004326 Ga0070681_100043266 280
37 3300005458 Ga0070681_10172166 Ga0070681_101721662 280
38 3300005458 Ga0070681_10238803 Ga0070681_102388031 280
39 3300005530 Ga0070679_100000009 Ga0070679_100000009130 280
40 3300005530 Ga0070679_100009712 Ga0070679_1000097128 280
41 3300005530 Ga0070679_100015998 Ga0070679_1000159982 280
42 3300005530 Ga0070679_100293218 Ga0070679_1002932182 280
43 3300005546 Ga0070696_100071942 Ga0070696_1000719422 280
44 3300005563 Ga0068855_100171728 Ga0068855_1001717282 280
45 3300005577 Ga0068857_100040344 Ga0068857_1000403444 280
46 3300005578 Ga0068854_100360848 Ga0068854_1003608482 280
47 3300005617 Ga0068859_100012561 Ga0068859_1000125614 280
48 3300005618 Ga0068864_100003473 Ga0068864_10000347310 280
49 3300005719 Ga0068861_100000177 Ga0068861_10000017726 280
50 3300005841 Ga0068863_100001421 Ga0068863_1000014219 280
51 3300005843 Ga0068860_100011793 Ga0068860_1000117938 280
52 3300005844 Ga0068862_100004869 Ga0068862_10000486910 280
53 3300006931 Ga0097620_100012562 Ga0097620_1000125625 280
54 3300009093 Ga0105240_10381990 Ga0105240_103819902 280
55 3300009098 Ga0105245_10499164 Ga0105245_104991641 280
56 3300009177 Ga0105248_10007894 Ga0105248_100078946 280
57 3300009551 Ga0105238_10288320 Ga0105238_102883202 280
58 3300009553 Ga0105249_10637929 Ga0105249_106379292 280
59 3300013102 Ga0157371_10022281 Ga0157371_100222812 280
60 3300013105 Ga0157369_10000712 Ga0157369_1000071229 280
61 3300013105 Ga0157369_10002272 Ga0157369_1000227213 280
62 3300013105 Ga0157369_10021254 Ga0157369_100212549 280
63 3300013105 Ga0157369_10210739 Ga0157369_102107393 280
64 3300013105 Ga0157369_10423743 Ga0157369_104237432 280
65 3300013297 Ga0157378_10045185 Ga0157378_100451851 280
66 3300013306 Ga0163162_10098134 Ga0163162_100981343 280
67 3300013307 Ga0157372_10416808 Ga0157372_104168084 280
68 3300013307 Ga0157372_10598600 Ga0157372_105986002 280
69 3300013308 Ga0157375_10013714 Ga0157375_100137144 280
70 3300014325 Ga0163163_10012548 Ga0163163_100125482 280
71 3300021361 Ga0213872_10000222 Ga0213872_100002222 280
72 3300021361 Ga0213872_10002524 Ga0213872_100025246 280
73 3300021361 Ga0213872_10005842 Ga0213872_100058424 280
74 3300021361 Ga0213872_10027504 Ga0213872_100275042 280
75 3300022467 Ga0224712_10000988 Ga0224712_100009885 280
76 3300022467 Ga0224712_10021061 Ga0224712_100210612 280
77 3300025900 Ga0207710_10127788 Ga0207710_101277882 280
78 3300025907 Ga0207645_10012864 Ga0207645_100128645 280
79 3300025909 Ga0207705_10000605 Ga0207705_100006056 280
80 3300025912 Ga0207707_10000174 Ga0207707_1000017416 280
81 3300025912 Ga0207707_10012959 Ga0207707_100129592 280
82 3300025917 Ga0207660_10000526 Ga0207660_1000052614 280
83 3300025917 Ga0207660_10215779 Ga0207660_102157792 280
84 3300025917 Ga0207660_10615766 Ga0207660_106157661 280
85 3300025919 Ga0207657_10210491 Ga0207657_102104912 280
86 3300025921 Ga0207652_10000070 Ga0207652_1000007048 280
87 3300025921 Ga0207652_10040285 Ga0207652_100402856 280
88 3300025921 Ga0207652_10196032 Ga0207652_101960322 280
89 3300025921 Ga0207652_10228615 Ga0207652_102286151 280
90 3300025921 Ga0207652_10437094 Ga0207652_104370942 280
91 3300025921 Ga0207652_10487601 Ga0207652_104876012 280
92 3300025923 Ga0207681_10036574 Ga0207681_100365742 280
93 3300025925 Ga0207650_10003967 Ga0207650_100039675 280
94 3300025925 Ga0207650_10009327 Ga0207650_100093274 280
95 3300025927 Ga0207687_10256183 Ga0207687_102561832 280
96 3300025932 Ga0207690_10000226 Ga0207690_100002265 280
97 3300025932 Ga0207690_10001742 Ga0207690_1000174210 280
98 3300025933 Ga0207706_10095155 Ga0207706_100951553 280
99 3300025934 Ga0207686_10101099 Ga0207686_101010993 280
100 3300025941 Ga0207711_10011646 Ga0207711_100116464 280
101 3300025942 Ga0207689_10000266 Ga0207689_1000026632 280
102 3300025942 Ga0207689_10024543 Ga0207689_100245436 280
103 3300025960 Ga0207651_10329286 Ga0207651_103292862 280
104 3300025981 Ga0207640_10385777 Ga0207640_103857771 280
105 3300026035 Ga0207703_10003360 Ga0207703_100033603 280
106 3300026095 Ga0207676_10026324 Ga0207676_100263243 280
107 3300026116 Ga0207674_10034777 Ga0207674_100347772 280
108 3300026118 Ga0207675_100000618 Ga0207675_1000006186 280
109 3300031548 Ga0307408_100015130 Ga0307408_1000151303 280
110 3300031731 Ga0307405_10031739 Ga0307405_100317393 280
111 3300031824 Ga0307413_10006136 Ga0307413_100061362 280
112 3300031852 Ga0307410_10002502 Ga0307410_100025025 280
113 3300031852 Ga0307410_10282024 Ga0307410_102820241 280
114 3300031901 Ga0307406_10024519 Ga0307406_100245192 280
115 3300031901 Ga0307406_10140687 Ga0307406_101406872 280
116 3300031903 Ga0307407_10010925 Ga0307407_100109252 280
117 3300031995 Ga0307409_100012419 Ga0307409_1000124194 280
118 3300031995 Ga0307409_100072063 Ga0307409_1000720633 280
119 3300032002 Ga0307416_100003773 Ga0307416_1000037734 280
120 3300032004 Ga0307414_10046904 Ga0307414_100469041 280
121 3300032004 Ga0307414_10228458 Ga0307414_102284582 280
122 3300032005 Ga0307411_10037789 Ga0307411_100377891 280
123 3300032126 Ga0307415_100049904 Ga0307415_1000499042 280
124 3300039447 Ga0436361_0023560 Ga0436361_0023560_12298_13152 280
125 3300039447 Ga0436361_0416549 Ga0436361_0416549_85_945 280
126 3300039447 Ga0436361_0420588 Ga0436361_0420588_23_883 280
127 3300039447 Ga0436361_0471806 Ga0436361_0471806_23_883 280
128 3300039447 Ga0436361_0485572 Ga0436361_0485572_15416_16270 280
129 3300039447 Ga0436361_0670010 Ga0436361_0670010_1936_2790 280
130 3300039447 Ga0436361_0883590 Ga0436361_0883590_20_880 280
131 3300044693 Ga0466961_0075615 Ga0466961_0075615_273_1145 280
132 3300044693 Ga0466961_0115028 Ga0466961_0115028_290_1135 280
133 3300044693 Ga0466961_0279288 Ga0466961_0279288_100_942 280
134 3300044694 Ga0466963_0082555 Ga0466963_0082555_1073_1918 280
135 3300044694 Ga0466963_0407766 Ga0466963_0407766_104_946 280
136 3300044719 Ga0466971_0012505 Ga0466971_0012505_304_1149 280
137 3300044842 Ga0466957_0013648 Ga0466957_0013648_3704_4549 280
138 3300044842 Ga0466957_0236657 Ga0466957_0236657_337_1191 280
139 3300045049 Ga0466959_0036014 Ga0466959_0036014_2664_3506 280
140 3300045836 Ga0466958_0000377 Ga0466958_0000377_4159_5019 280
141 3300045836 Ga0466958_0017071 Ga0466958_0017071_561_1403 280
142 3300045836 Ga0466958_0028083 Ga0466958_0028083_2302_3147 280
143 3300045836 Ga0466958_0158261 Ga0466958_0158261_52_894 280
144 3300045976 Ga0466967_0044488 Ga0466967_0044488_1936_2781 280
145 3300045976 Ga0466967_0398376 Ga0466967_0398376_291_1136 280
146 3300046454 Ga0495592_0017547 Ga0495592_0017547_363_1226 280
147 3300046461 Ga0495641_0002710 Ga0495641_0002710_11217_12074 280
148 3300046463 Ga0495653_0166150 Ga0495653_0166150_233_1096 280
149 3300046507 Ga0495606_0030870 Ga0495606_0030870_1183_2040 280
150 3300046514 Ga0495618_0011569 Ga0495618_0011569_3527_4384 280
151 3300046514 Ga0495618_0027195 Ga0495618_0027195_650_1513 280
152 3300046515 Ga0495620_0001340 Ga0495620_0001340_8819_9676 280
153 3300046516 Ga0495628_0009909 Ga0495628_0009909_2469_3326 280
154 3300046516 Ga0495628_0012310 Ga0495628_0012310_5538_6401 280
155 3300046529 Ga0495652_0000077 Ga0495652_0000077_5620_6483 280
156 3300046529 Ga0495652_0004517 Ga0495652_0004517_2932_3789 280
157 3300046529 Ga0495652_0018553 Ga0495652_0018553_1799_2662 280
158 3300046543 Ga0495645_0079208 Ga0495645_0079208_730_1593 280
159 3300046543 Ga0495645_0193784 Ga0495645_0193784_232_1095 280
160 3300046642 Ga0495634_0013579 Ga0495634_0013579_4483_5346 280
161 3300046648 Ga0495611_0088348 Ga0495611_0088348_118_1032 280
162 3300046663 Ga0495635_0254248 Ga0495635_0254248_253_1110 280
163 3300046665 Ga0495661_0006274 Ga0495661_0006274_1592_2464 280
164 3300046675 Ga0495657_0002410 Ga0495657_0002410_10705_11568 280
165 3300046675 Ga0495657_0152646 Ga0495657_0152646_322_1179 280
166 3300046678 Ga0495599_0002687 Ga0495599_0002687_662_1525 280
167 3300046679 Ga0495623_0082677 Ga0495623_0082677_482_1345 280
168 3300046680 Ga0495646_0026568 Ga0495646_0026568_190_1053 280
169 3300046690 Ga0495624_0033252 Ga0495624_0033252_180_1037 280
170 3300046809 Ga0495600_0051784 Ga0495600_0051784_879_1736 280
171 3300047317 Ga0495604_0039106 Ga0495604_0039106_1371_2234 280
172 3300047319 Ga0495674_0004051 Ga0495674_0004051_9878_10741 280
173 3300047321 Ga0495676_0005593 Ga0495676_0005593_6972_7835 280
174 3300047321 Ga0495676_0118225 Ga0495676_0118225_693_1550 280
175 3300047444 Ga0495675_0066148 Ga0495675_0066148_601_1464 280
176 3300048088 Ga0495602_0001069 Ga0495602_0001069_23463_24320 280
177 3300048088 Ga0495602_0010183 Ga0495602_0010183_5337_6200 280
178 3300048088 Ga0495602_0010772 Ga0495602_0010772_2168_3025 280
179 3300048088 Ga0495602_0017173 Ga0495602_0017173_4441_5304 280
180 3300048909 Ga0496106_0175052 Ga0496106_0175052_575_1438 280
181 3300048912 Ga0496109_0042663 Ga0496109_0042663_723_1586 280
182 3300048915 Ga0496112_0402969 Ga0496112_0402969_406_1248 280
183 3300048920 Ga0496117_0001437 Ga0496117_0001437_15190_16146 280
184 3300048922 Ga0496119_0000681 Ga0496119_0000681_13496_14452 280
185 3300048923 Ga0496120_0000674 Ga0496120_0000674_30918_31874 280
186 3300048923 Ga0496120_0006133 Ga0496120_0006133_7756_8628 280
187 3300049568 Ga0501031_0008086 Ga0501031_0008086_438_1286 280
188 3300049568 Ga0501031_0164680 Ga0501031_0164680_469_1317 280
189 3300049571 Ga0501034_0021055 Ga0501034_0021055_4491_5339 280
190 3300049571 Ga0501034_0442610 Ga0501034_0442610_237_1085 280
191 3300049572 Ga0501036_0005815 Ga0501036_0005815_7561_8409 280
192 3300049573 Ga0501037_0000629 Ga0501037_0000629_25187_26035 280
193 3300049573 Ga0501037_0033285 Ga0501037_0033285_418_1266 280
194 3300049573 Ga0501037_0140507 Ga0501037_0140507_161_1009 280
195 3300049573 Ga0501037_0209051 Ga0501037_0209051_504_1346 280
196 3300049574 Ga0501038_0005928 Ga0501038_0005928_5270_6118 280
197 3300049576 Ga0501040_0157919 Ga0501040_0157919_631_1479 280
198 3300049579 Ga0501043_0008712 Ga0501043_0008712_5062_5910 280
199 3300049580 Ga0501046_0001866 Ga0501046_0001866_7560_8408 280
200 3300049581 Ga0501047_0116106 Ga0501047_0116106_1316_2164 280
201 3300049582 Ga0501048_0033219 Ga0501048_0033219_2217_3065 280
202 3300049586 Ga0501070_0005974 Ga0501070_0005974_6868_7710 280
203 3300049586 Ga0501070_0006904 Ga0501070_0006904_6544_7386 280
204 3300049586 Ga0501070_0020953 Ga0501070_0020953_3474_4409 280
205 3300049586 Ga0501070_0041100 Ga0501070_0041100_2305_3147 280
206 3300049589 Ga0501073_0106260 Ga0501073_0106260_1089_1931 280
207 3300049590 Ga0501074_0001493 Ga0501074_0001493_762_1697 280
208 3300049741 Ga0501079_0000113 Ga0501079_0000113_17907_18842 280
209 3300049822 Ga0501035_0002164 Ga0501035_0002164_832_1680 280
210 3300049823 Ga0501044_0022204 Ga0501044_0022204_4492_5334 280
211 3300049823 Ga0501044_0028715 Ga0501044_0028715_403_1251 280
212 3300049824 Ga0501045_0037304 Ga0501045_0037304_2667_3515 280
213 3300053117 Ga0500593_020249 Ga0500593_020249_353_1324 280
214 3300053121 Ga0500607_000909 Ga0500607_000909_16080_16946 280
215 3300053149 Ga0500600_0001066 Ga0500600_0001066_9380_10258 280
216 iso_pu_bacteria 2824609381 2824609679 280
217 iso_pu_bacteria 2824653114 2824658571 280
218 iso_pu_bacteria 2842333319 2842337386 280
219 iso_pu_bacteria 2935847175 2935855105 280
220 iso_pu_bacteria 2935864058 2935872494 280
221 iso_pu_bacteria 2935992306 2936001544 280
222 iso_pu_bacteria 2936055302 2936063810 280

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00551

Formyl_trans_N

Formyl transferase

127

304

0.96

PF13740

ACT_6

ACT domain

44

121

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lou-assembly1.cif.gz_A crystal structure of formyltetrahydrofolate deformylase (yp_105254.1) from burkholderia mallei atcc 23344 at 1.90 a resolution 0.9715 1 280
3n0v-assembly1.cif.gz_C crystal structure of a formyltetrahydrofolate deformylase (pp_0327) from pseudomonas putida kt2440 at 2.25 a resolution 0.9713 3 279
3n0v-assembly1.cif.gz_D crystal structure of a formyltetrahydrofolate deformylase (pp_0327) from pseudomonas putida kt2440 at 2.25 a resolution 0.9713 3 279
3n0v-assembly1.cif.gz_B crystal structure of a formyltetrahydrofolate deformylase (pp_0327) from pseudomonas putida kt2440 at 2.25 a resolution 0.9691 3 279
3lou-assembly1.cif.gz_A crystal structure of formyltetrahydrofolate deformylase (yp_105254.1) from burkholderia mallei atcc 23344 at 1.90 a resolution 0.9681 1 280
ID Description Score Start End Superfamily
3nrbA01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9639 2 83 3.30.70.260
3o1lB01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9308 2 80 3.30.70.260
3nrbA01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9298 2 83 3.30.70.260
3o1lA01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.927 1 82 3.30.70.260
3w7bA01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9197 1 83 3.30.70.260
ID Description Score Start End GO Terms
AF-A0A4Q3UU89-F1-model_v4 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.9857 95 280 GO:0006189
GO:0006730
GO:0008864
AF-A0A7X8Y2C9-F1-model_v4 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.9838 1 188 GO:0006189
GO:0006730
GO:0008864
AF-A0A4V1UA86-F1-model_v4 deleted 0.9835 1 109
AF-A0A3D3KRS6-F1-model_v4 Formyltetrahydrofolate deformylase 0.9835 2 79 GO:0006189
GO:0008864
AF-C5TBB0-F1-model_v4 Formyltetrahydrofolate deformylase (EC 3.5.1.10) (Formyl-FH(4) hydrolase) 0.9827 2 280 GO:0006189
GO:0006730
GO:0008864

Feature Viewer

pLDDT pTM Quality
92.54 0.88 High
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Predicted Structure (AlphaFold2)

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