F335199

General Info

Members Datasets Scaffolds Average Seq Length
223 134 446 408

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100208392|Ga0070683_1002083922
Length 461
Sequence VRSFDRSRRYAWLVVALLLPVALLNYLDRQMLATMKASMVSDIPTIADKADWGLILGSFKWTYALLGPIAGYIADRFSRRWVIGASLLAWSVVTWWTGQCTTFHELLTVRAFMGVSEAFYFPAALALITDYHLGPTRSRAVGVHQTGVYLGQILGGFAGYVAEAPALGWRWAFTSAGMLGVLYAIPLLALLRDPERDKYRSLDFARDDGDAHPERATDPARAKRVEGSPEGLEGSALAASRQGLRPLRGRTPDLTPSGALTALLTNRNFILMVMYFTLPAIAGWIVRDWMPEILRERFHLGQGRAGVSAILFVQVASLVGAVVGGTLADRWMRRTNRGRIYTSAIGTMLFLPALFSVGNSGTLGVAIVGLIVFGLGWGFFDSNNMPILSQIARPELRATGYGIMNLVSISCGGFGDWAFGALRDRAVPLNLIFGVFAGVALLSVGIVLMIRPRVDVAELAG

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
4 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
56 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
57 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
92 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
93 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
104 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
105 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
106 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
107 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
114 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
115 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
116 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
117 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
118 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
119 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
121 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
122 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
123 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
124 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
125 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
126 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
127 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
128 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
129 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
130 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
131 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
132 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
133 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
134 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.41
Metatranscriptomes 0
Isolates 3.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.28
Nodule 0
Rhizoplane 0.9
Rhizosphere 89.69
Stem 0
Stem Tuber 0
Unclassified 16.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100208392 3300005329 Bacteria 1856
2 rootH2_10180790 3300003320 Bacteria 2908
3 Ga0055536_1000049 3300003781 Bacteria 113328
4 Ga0055530_10005350 3300003791 Bacteria 6139
5 Ga0055530_10014302 3300003791 Bacteria 2652
6 Ga0065714_10064461 3300005288 Bacteria 66149
7 Ga0070658_10071547 3300005327 Bacteria 2841
8 Ga0070658_10135602 3300005327 Bacteria 2054
9 Ga0070683_100018926 3300005329 Bacteria 6110
10 Ga0070683_100043879 3300005329 Bacteria 4122
11 Ga0070690_100132283 3300005330 Unclassified 1686
12 Ga0070666_10031782 3300005335 Unclassified 3486
13 Ga0070680_100031810 3300005336 Unclassified 4243
14 Ga0068868_100003532 3300005338 Bacteria 10893
15 Ga0068868_100225882 3300005338 Bacteria 1569
16 Ga0070660_100004409 3300005339 Bacteria 9724
17 Ga0070660_100034279 3300005339 Unclassified 3834
18 Ga0070689_100024414 3300005340 Bacteria 4534
19 Ga0070689_100058062 3300005340 Bacteria 3005
20 Ga0070661_100007221 3300005344 Bacteria 7658
21 Ga0070669_100018599 3300005353 Bacteria 4966
22 Ga0070675_100055368 3300005354 Unclassified 3265
23 Ga0070675_100128287 3300005354 Bacteria 2159
24 Ga0070671_100024602 3300005355 Bacteria 4932
25 Ga0070671_100028932 3300005355 Bacteria 4566
26 Ga0070671_100077453 3300005355 Bacteria 2779
27 Ga0070673_100199108 3300005364 Bacteria 1724
28 Ga0070688_100004572 3300005365 Bacteria 7217
29 Ga0070659_100016195 3300005366 Bacteria 5594
30 Ga0070659_100076698 3300005366 Bacteria 2665
31 Ga0070659_100101368 3300005366 Unclassified 2318
32 Ga0070667_100007628 3300005367 Bacteria 8973
33 Ga0070667_100168801 3300005367 Bacteria 1931
34 Ga0070662_100046470 3300005457 Unclassified 3119
35 Ga0070679_100000414 3300005530 Bacteria 36356
36 Ga0070679_100001735 3300005530 Bacteria 19640
37 Ga0070679_100006264 3300005530 Bacteria 11080
38 Ga0070679_100052568 3300005530 Bacteria 4057
39 Ga0070679_100224364 3300005530 Unclassified 1839
40 Ga0070684_100039480 3300005535 Unclassified 4060
41 Ga0070684_100055874 3300005535 Bacteria 3443
42 Ga0070684_100117119 3300005535 Bacteria 2394
43 Ga0070684_100119565 3300005535 Bacteria 2370
44 Ga0068853_100000002 3300005539 Bacteria 485323
45 Ga0068853_100003683 3300005539 Bacteria 11757
46 Ga0068853_100012092 3300005539 Bacteria 7022
47 Ga0068853_100033945 3300005539 Bacteria 4329
48 Ga0068853_100095373 3300005539 Bacteria 2623
49 Ga0070665_100125423 3300005548 Bacteria 2570
50 Ga0068855_100004847 3300005563 Bacteria 16422
51 Ga0068855_100013323 3300005563 Bacteria 9919
52 Ga0068855_100143058 3300005563 Unclassified 2724
53 Ga0070664_100027614 3300005564 Unclassified 4717
54 Ga0070664_100178150 3300005564 Bacteria 1888
55 Ga0068857_100005425 3300005577 Bacteria 10872
56 Ga0068857_100177732 3300005577 Unclassified 1936
57 Ga0068856_100018095 3300005614 Bacteria 6831
58 Ga0068856_100032307 3300005614 Bacteria 5124
59 Ga0068856_100173693 3300005614 Unclassified 2167
60 Ga0068852_100000379 3300005616 Bacteria 29959
61 Ga0068852_100016007 3300005616 Bacteria 5838
62 Ga0068852_100096316 3300005616 Bacteria 2660
63 Ga0068859_100211073 3300005617 Bacteria 2028
64 Ga0068864_100067723 3300005618 Unclassified 3100
65 Ga0068864_100248394 3300005618 Bacteria 1651
66 Ga0068863_100043320 3300005841 Bacteria 4274
67 Ga0068858_100126859 3300005842 Bacteria 2390
68 Ga0068858_100132314 3300005842 Bacteria 2340
69 Ga0070717_10089687 3300006028 Bacteria 2594
70 Ga0075362_10038014 3300006177 Bacteria 2113
71 Ga0068871_100018059 3300006358 Bacteria 5353
72 Ga0075428_100104096 3300006844 Bacteria 3095
73 Ga0075433_10031735 3300006852 Bacteria 4518
74 Ga0075429_100020096 3300006880 Bacteria 5791
75 Ga0097620_100211084 3300006931 Bacteria 2028
76 Ga0105240_10003613 3300009093 Bacteria 23948
77 Ga0105240_10196208 3300009093 Bacteria 2370
78 Ga0105247_10024272 3300009101 Bacteria 3653
79 Ga0105242_10164033 3300009176 Bacteria 1947
80 Ga0105237_10002634 3300009545 Bacteria 22084
81 Ga0105237_10024785 3300009545 Bacteria 6138
82 Ga0105237_10088078 3300009545 Unclassified 3094
83 Ga0105238_10001145 3300009551 Bacteria 26746
84 Ga0157373_10002480 3300013100 Bacteria 14051
85 Ga0157371_10001859 3300013102 Bacteria 21187
86 Ga0157371_10040300 3300013102 Unclassified 3336
87 Ga0157370_10000333 3300013104 Bacteria 59235
88 Ga0157370_10003868 3300013104 Bacteria 17439
89 Ga0157370_10025175 3300013104 Bacteria 5891
90 Ga0157370_10098555 3300013104 Unclassified 2740
91 Ga0157369_10035319 3300013105 Bacteria 5483
92 Ga0157378_10001264 3300013297 Bacteria 22767
93 Ga0157378_10005980 3300013297 Bacteria 10668
94 Ga0157372_10000231 3300013307 Bacteria 62248
95 Ga0157372_10077229 3300013307 Bacteria 3761
96 Ga0157372_10080257 3300013307 Bacteria 3690
97 Ga0157375_10178326 3300013308 Bacteria 2275
98 Ga0163163_10000106 3300014325 Bacteria 88327
99 Ga0163163_10072592 3300014325 Bacteria 3431
100 Ga0157377_10016786 3300014745 Bacteria 3772
101 Ga0209436_100973 3300025208 Bacteria 11130
102 Ga0209676_1000001 3300025292 Bacteria 1852142
103 Ga0209050_1000258 3300025298 Bacteria 113741
104 Ga0209050_1001115 3300025298 Bacteria 32488
105 Ga0207426_1000559 3300025302 Bacteria 50931
106 Ga0207656_10037139 3300025321 Bacteria 2048
107 Ga0207680_10026504 3300025903 Unclassified 3214
108 Ga0207647_10011477 3300025904 Bacteria 6211
109 Ga0207647_10039742 3300025904 Unclassified 2966
110 Ga0207645_10018632 3300025907 Bacteria 4561
111 Ga0207643_10113215 3300025908 Bacteria 1600
112 Ga0207705_10007790 3300025909 Bacteria 7865
113 Ga0207705_10261844 3300025909 Bacteria 1320
114 Ga0207654_10107018 3300025911 Unclassified 1733
115 Ga0207695_10030974 3300025913 Bacteria 5880
116 Ga0207671_10016919 3300025914 Bacteria 5644
117 Ga0207671_10033476 3300025914 Bacteria 3822
118 Ga0207660_10062950 3300025917 Bacteria 2674
119 Ga0207660_10099367 3300025917 Unclassified 2171
120 Ga0207662_10005810 3300025918 Bacteria 6608
121 Ga0207657_10001999 3300025919 Bacteria 22046
122 Ga0207657_10003408 3300025919 Bacteria 16986
123 Ga0207657_10070122 3300025919 Unclassified 2971
124 Ga0207652_10000016 3300025921 Bacteria 188815
125 Ga0207652_10000027 3300025921 Bacteria 151000
126 Ga0207652_10004457 3300025921 Bacteria 11401
127 Ga0207652_10184589 3300025921 Unclassified 1875
128 Ga0207650_10030852 3300025925 Unclassified 3866
129 Ga0207659_10060343 3300025926 Unclassified 2729
130 Ga0207644_10062728 3300025931 Bacteria 2697
131 Ga0207644_10152641 3300025931 Bacteria 1789
132 Ga0207690_10014053 3300025932 Bacteria 4826
133 Ga0207690_10150185 3300025932 Unclassified 1726
134 Ga0207670_10182657 3300025936 Unclassified 1581
135 Ga0207704_10094102 3300025938 Bacteria 1977
136 Ga0207691_10108668 3300025940 Bacteria 2468
137 Ga0207711_10078256 3300025941 Bacteria 2884
138 Ga0207661_10121276 3300025944 Bacteria 2226
139 Ga0207679_10119104 3300025945 Bacteria 2098
140 Ga0207679_10178197 3300025945 Unclassified 1756
141 Ga0207667_10000100 3300025949 Bacteria 138482
142 Ga0207658_10214445 3300025986 Bacteria 1615
143 Ga0207677_10165597 3300026023 Bacteria 1723
144 Ga0207639_10000009 3300026041 Bacteria 432727
145 Ga0207639_10026657 3300026041 Bacteria 4200
146 Ga0207639_10043908 3300026041 Unclassified 3358
147 Ga0207678_10072958 3300026067 Unclassified 2942
148 Ga0207702_10005839 3300026078 Bacteria 10703
149 Ga0207702_10094069 3300026078 Bacteria 2630
150 Ga0207641_10147304 3300026088 Bacteria 2130
151 Ga0207641_10166222 3300026088 Bacteria 2010
152 Ga0207674_10009127 3300026116 Bacteria 11378
153 Ga0207674_10012578 3300026116 Bacteria 9457
154 Ga0207674_10037339 3300026116 Bacteria 5053
155 Ga0207674_10040448 3300026116 Bacteria 4829
156 Ga0207674_10209208 3300026116 Unclassified 1900
157 Ga0307515_10000493 3300028794 Bacteria 94441
158 Ga0307406_10169675 3300031901 Bacteria 1578
159 Ga0395899_0003471 3300037312 Bacteria 12490
160 Ga0395899_0029544 3300037312 Bacteria 4123
161 Ga0395899_0035653 3300037312 Unclassified 3733
162 Ga0395899_0100754 3300037312 Unclassified 2085
163 Ga0395900_0012034 3300037418 Bacteria 8844
164 Ga0395898_0002417 3300037466 Bacteria 22092
165 Ga0395898_0010621 3300037466 Bacteria 9618
166 Ga0395898_0044527 3300037466 Bacteria 4367
167 Ga0395905_0024366 3300037471 Bacteria 5712
168 Ga0395901_0016163 3300038443 Bacteria 7601
169 Ga0395901_0072997 3300038443 Bacteria 3578
170 Ga0436365_0664878 3300039437 Bacteria 2289
171 Ga0436365_1024678 3300039437 Bacteria 15143
172 Ga0451577_0007145 3300042876 Bacteria 11012
173 Ga0451577_0009259 3300042876 Bacteria 9492
174 Ga0453684_0000872 3300044712 Bacteria 101088
175 Ga0466959_0040001 3300045049 Bacteria 3465
176 Ga0451576_0011571 3300045051 Bacteria 10009
177 Ga0451576_0137206 3300045051 Unclassified 2551
178 Ga0451576_0219344 3300045051 Unclassified 1986
179 Ga0451576_0478040 3300045051 Bacteria 1309
180 Ga0495610_0000160 3300046512 Bacteria 74776
181 Ga0495643_0000169 3300046522 Bacteria 103635
182 Ga0495643_0019562 3300046522 Bacteria 3915
183 Ga0496100_0059616 3300048903 Bacteria 2509
184 Ga0496112_0009348 3300048915 Bacteria 8824
185 Ga0501032_0008366 3300049569 Bacteria 7541
186 Ga0501033_0002260 3300049570 Bacteria 16491
187 Ga0501034_0002472 3300049571 Bacteria 22252
188 Ga0501043_0091256 3300049579 Bacteria 2395
189 Ga0501046_0001838 3300049580 Bacteria 20212
190 Ga0501046_0021032 3300049580 Bacteria 5388
191 Ga0501046_0090943 3300049580 Bacteria 2348
192 Ga0501047_0012944 3300049581 Bacteria 7899
193 Ga0501047_0015421 3300049581 Bacteria 7280
194 Ga0501047_0021682 3300049581 Bacteria 6168
195 Ga0501202_001379 3300049652 Bacteria 3887
196 Ga0501217_021232 3300049661 Bacteria 1532
197 Ga0501259_000905 3300049688 Bacteria 4896
198 Ga0501080_0106256 3300049742 Unclassified 2602
199 Ga0501083_0075713 3300049744 Bacteria 2235
200 Ga0501266_002532 3300049763 Bacteria 2300
201 Ga0501035_0001753 3300049822 Bacteria 21910
202 Ga0501035_0007491 3300049822 Bacteria 10196
203 Ga0501035_0047498 3300049822 Bacteria 3853
204 Ga0501044_0004177 3300049823 Bacteria 16232
205 Ga0501044_0004596 3300049823 Bacteria 15435
206 Ga0501044_0022879 3300049823 Bacteria 6656
207 Ga0501044_0036288 3300049823 Bacteria 5158
208 Ga0501044_0098555 3300049823 Unclassified 2943
209 Ga0501044_0341916 3300049823 Bacteria 1417
210 nmdc:mga03683_30768_c1 3300050489 Bacteria 2149
211 nmdc:mga09592_21901_c1 3300050508 Bacteria 5270
212 Ga0500555_000141 3300053103 Bacteria 34204
213 Ga0500588_0065400 3300053146 Bacteria 1177
214 Ga0500616_0000135 3300053153 Bacteria 126795
215 Ga0500645_000194 3300053730 Bacteria 47181
216 2819679412 2818991460 Bacteria 7595395
217 2896320731 2896317667 Bacteria 4606601
218 2896344611 2896344016 Bacteria 3811746
219 2898714793 2898713307 Bacteria 4110805
220 2929183050 2929177148 Bacteria 7883697
221 2945979001 2945977869 Bacteria 7777518
222 2946015136 2946013367 Bacteria 7766675
223 3003235891 3003233435 Bacteria 4458031
224 Ga0070683_100208392
225 rootH2_10180790
226 Ga0055536_1000049
227 Ga0055530_10005350
228 Ga0055530_10014302
229 Ga0065714_10064461
230 Ga0070658_10071547
231 Ga0070658_10135602
232 Ga0070683_100018926
233 Ga0070683_100043879
234 Ga0070690_100132283
235 Ga0070666_10031782
236 Ga0070680_100031810
237 Ga0068868_100003532
238 Ga0068868_100225882
239 Ga0070660_100004409
240 Ga0070660_100034279
241 Ga0070689_100024414
242 Ga0070689_100058062
243 Ga0070661_100007221
244 Ga0070669_100018599
245 Ga0070675_100055368
246 Ga0070675_100128287
247 Ga0070671_100024602
248 Ga0070671_100028932
249 Ga0070671_100077453
250 Ga0070673_100199108
251 Ga0070688_100004572
252 Ga0070659_100016195
253 Ga0070659_100076698
254 Ga0070659_100101368
255 Ga0070667_100007628
256 Ga0070667_100168801
257 Ga0070662_100046470
258 Ga0070679_100000414
259 Ga0070679_100001735
260 Ga0070679_100006264
261 Ga0070679_100052568
262 Ga0070679_100224364
263 Ga0070684_100039480
264 Ga0070684_100055874
265 Ga0070684_100117119
266 Ga0070684_100119565
267 Ga0068853_100000002
268 Ga0068853_100003683
269 Ga0068853_100012092
270 Ga0068853_100033945
271 Ga0068853_100095373
272 Ga0070665_100125423
273 Ga0068855_100004847
274 Ga0068855_100013323
275 Ga0068855_100143058
276 Ga0070664_100027614
277 Ga0070664_100178150
278 Ga0068857_100005425
279 Ga0068857_100177732
280 Ga0068856_100018095
281 Ga0068856_100032307
282 Ga0068856_100173693
283 Ga0068852_100000379
284 Ga0068852_100016007
285 Ga0068852_100096316
286 Ga0068859_100211073
287 Ga0068864_100067723
288 Ga0068864_100248394
289 Ga0068863_100043320
290 Ga0068858_100126859
291 Ga0068858_100132314
292 Ga0070717_10089687
293 Ga0075362_10038014
294 Ga0068871_100018059
295 Ga0075428_100104096
296 Ga0075433_10031735
297 Ga0075429_100020096
298 Ga0097620_100211084
299 Ga0105240_10003613
300 Ga0105240_10196208
301 Ga0105247_10024272
302 Ga0105242_10164033
303 Ga0105237_10002634
304 Ga0105237_10024785
305 Ga0105237_10088078
306 Ga0105238_10001145
307 Ga0157373_10002480
308 Ga0157371_10001859
309 Ga0157371_10040300
310 Ga0157370_10000333
311 Ga0157370_10003868
312 Ga0157370_10025175
313 Ga0157370_10098555
314 Ga0157369_10035319
315 Ga0157378_10001264
316 Ga0157378_10005980
317 Ga0157372_10000231
318 Ga0157372_10077229
319 Ga0157372_10080257
320 Ga0157375_10178326
321 Ga0163163_10000106
322 Ga0163163_10072592
323 Ga0157377_10016786
324 Ga0209436_100973
325 Ga0209676_1000001
326 Ga0209050_1000258
327 Ga0209050_1001115
328 Ga0207426_1000559
329 Ga0207656_10037139
330 Ga0207680_10026504
331 Ga0207647_10011477
332 Ga0207647_10039742
333 Ga0207645_10018632
334 Ga0207643_10113215
335 Ga0207705_10007790
336 Ga0207705_10261844
337 Ga0207654_10107018
338 Ga0207695_10030974
339 Ga0207671_10016919
340 Ga0207671_10033476
341 Ga0207660_10062950
342 Ga0207660_10099367
343 Ga0207662_10005810
344 Ga0207657_10001999
345 Ga0207657_10003408
346 Ga0207657_10070122
347 Ga0207652_10000016
348 Ga0207652_10000027
349 Ga0207652_10004457
350 Ga0207652_10184589
351 Ga0207650_10030852
352 Ga0207659_10060343
353 Ga0207644_10062728
354 Ga0207644_10152641
355 Ga0207690_10014053
356 Ga0207690_10150185
357 Ga0207670_10182657
358 Ga0207704_10094102
359 Ga0207691_10108668
360 Ga0207711_10078256
361 Ga0207661_10121276
362 Ga0207679_10119104
363 Ga0207679_10178197
364 Ga0207667_10000100
365 Ga0207658_10214445
366 Ga0207677_10165597
367 Ga0207639_10000009
368 Ga0207639_10026657
369 Ga0207639_10043908
370 Ga0207678_10072958
371 Ga0207702_10005839
372 Ga0207702_10094069
373 Ga0207641_10147304
374 Ga0207641_10166222
375 Ga0207674_10009127
376 Ga0207674_10012578
377 Ga0207674_10037339
378 Ga0207674_10040448
379 Ga0207674_10209208
380 Ga0307515_10000493
381 Ga0307406_10169675
382 Ga0395899_0003471
383 Ga0395899_0029544
384 Ga0395899_0035653
385 Ga0395899_0100754
386 Ga0395900_0012034
387 Ga0395898_0002417
388 Ga0395898_0010621
389 Ga0395898_0044527
390 Ga0395905_0024366
391 Ga0395901_0016163
392 Ga0395901_0072997
393 Ga0436365_0664878
394 Ga0436365_1024678
395 Ga0451577_0007145
396 Ga0451577_0009259
397 Ga0453684_0000872
398 Ga0466959_0040001
399 Ga0451576_0011571
400 Ga0451576_0137206
401 Ga0451576_0219344
402 Ga0451576_0478040
403 Ga0495610_0000160
404 Ga0495643_0000169
405 Ga0495643_0019562
406 Ga0496100_0059616
407 Ga0496112_0009348
408 Ga0501032_0008366
409 Ga0501033_0002260
410 Ga0501034_0002472
411 Ga0501043_0091256
412 Ga0501046_0001838
413 Ga0501046_0021032
414 Ga0501046_0090943
415 Ga0501047_0012944
416 Ga0501047_0015421
417 Ga0501047_0021682
418 Ga0501202_001379
419 Ga0501217_021232
420 Ga0501259_000905
421 Ga0501080_0106256
422 Ga0501083_0075713
423 Ga0501266_002532
424 Ga0501035_0001753
425 Ga0501035_0007491
426 Ga0501035_0047498
427 Ga0501044_0004177
428 Ga0501044_0004596
429 Ga0501044_0022879
430 Ga0501044_0036288
431 Ga0501044_0098555
432 Ga0501044_0341916
433 nmdc:mga03683_30768_c1
434 nmdc:mga09592_21901_c1
435 Ga0500555_000141
436 Ga0500588_0065400
437 Ga0500616_0000135
438 Ga0500645_000194
439 2819679412
440 2896320731
441 2896344611
442 2898714793
443 2929183050
444 2945979001
445 2946015136
446 3003235891

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

18

415

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ex5-assembly1.cif.gz_A human s1p transporter spns2 in an outward-facing open conformation (state 4) 0.8874 10 376
6e9o-assembly1.cif.gz_B e. coli d-galactonate:proton symporter mutant e133q in the outward substrate-bound form 0.8518 8 379
7t3n-assembly1.cif.gz_A r184q/e191q mutant of rat vesicular glutamate transporter 2 (vglut2) 0.8486 8 387
7t3o-assembly1.cif.gz_A rat vesicular glutamate transporter 2 (vglut2) in low cl condition 0.8467 8 381
6lz0-assembly1.cif.gz_A cryo-em structure of human mct1 in complex with basigin-2 in the presence of lactate 0.8456 6 376
ID Description Score Start End Superfamily
af_P39398_32_230_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9453 1 188 1.20.1250.20
af_Q8R090_126_283_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9429 47 192 1.20.1250.20
af_P25621_30_229_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9366 11 191 1.20.1250.20
af_P09836_19_223_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9328 2 189 1.20.1250.20
af_Q59WF2_48_242_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9286 10 189 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A831NPG2-F1-model_v4 MFS transporter 0.9825 1 190 GO:0016020
GO:0022857
AF-A0A831NPG2-F1-model_v4 MFS transporter 0.9724 1 190 GO:0016020
GO:0022857
AF-A0A355VHL7-F1-model_v4 deleted 0.9199 7 381
AF-A0A2V9F1Y2-F1-model_v4 MFS transporter 0.9102 1 380 GO:0016020
GO:0022857
AF-A0A7V3D4X3-F1-model_v4 MFS transporter 0.9019 4 351 GO:0016020
GO:0022857

Map