F335403

General Info

Members Datasets Scaffolds Average Seq Length
223 172 446 430

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100000091|Ga0068860_10000009139
Length 511
Sequence MEACETKTYSFQFLILRMDKKVRAQQRKPASAAKVRYAIVGTGGRSWMFSKAICTTYRGHCQLVALCDVNATRMEYYNREFGKQFGLKPVPAYKAAEFDRMIREAKPDVVIVTSIDRTHHIYIIKAMEAGCDVIAEKPLTVDAEKCRAILDTVKRTGRKLRVTFNYRYAPIRSKVKELLMQGAIGEVKSVHFEWLLDTSHGADYFRRWHRDKRNSGGLMVHKATHHFDLVNWWLDSTPETVFALGNLGFYGRQNAERRGITAFYDRGTGSQVAKKDPFSLDLSTSENLKGLYLDAEHEDGYRRDQSVFSDGISIEDTMNVLVRYKSGAQMSYSLHAYAPWEGYRIAFNGTRGRIEVNHQESSYISAQTGSLTEGCSSSEQIILMPHFKKPAIVEIPKSTGGHGGGDPLMLDNIFGLQKTEDPLHRFADHLDGARSILTGIAANKSFETGFPVKVDDLVRLEDWIEAPARNSSHPGQNGHKAPVASPANGFLKTSPRHKAGRNGKLRALKKN

Samples

Sample ID Description Type Environment
1 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
2 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
7 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
8 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
9 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
10 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
11 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
12 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
13 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
14 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
15 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
16 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
17 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
18 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
19 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
29 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
30 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
31 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
32 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
33 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
34 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
35 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
36 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
37 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
38 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
39 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
40 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
41 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
42 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
43 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
44 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
45 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
46 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
47 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
48 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
49 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
50 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
51 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
52 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
53 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
54 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
55 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
56 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
57 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
58 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
59 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
60 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
61 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
62 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
63 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
64 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
65 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
66 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
67 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
68 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
69 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
70 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
71 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
72 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
73 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
74 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
75 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
76 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
77 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
78 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
79 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
80 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
81 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
82 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
83 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
84 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
85 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
86 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
87 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
88 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
89 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
90 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
91 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
92 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
93 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
94 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
95 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
96 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
97 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
98 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
105 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
106 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
108 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
109 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
110 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
111 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
112 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
113 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
114 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
115 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
116 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
117 2643221591 Devosia sp. Root685 Isolate Unclassified
118 2643221674 Devosia sp. Root436 Isolate Unclassified
119 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
120 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
121 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
122 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
123 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
124 2818991441 Niallia circulans 3243 Isolate Rhizosphere
125 2818991459 Paenibacillus sp. 597 Isolate Unclassified
126 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
127 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
128 2852103415 Edaphovirga cremea DSM 105170 Isolate Rhizosphere
129 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
130 2857472729 Cohnella sp. R-74144 Isolate Unclassified
131 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
132 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
133 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
134 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
135 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
136 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
137 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
138 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
139 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
140 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
141 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
142 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
143 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
144 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
145 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
146 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
147 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
148 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
149 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
150 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
151 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
152 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
153 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
154 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
155 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
156 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
157 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
158 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
159 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
160 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
161 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
162 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
163 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
164 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
165 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
166 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
167 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
168 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
169 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
170 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified
171 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
172 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 68.16
Metatranscriptomes 0.9
Isolates 30.94

Biome Distribution

Category Percentage (%)
Aerial Root 0.9
Bulb 0
Endosphere 3.59
Nodule 0.45
Rhizoplane 4.93
Rhizosphere 61.43
Stem 0
Stem Tuber 0
Unclassified 1.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068860_100000091 3300005843 Bacteria 151143
2 Ga0055538_1000605 3300003751 Bacteria 11821
3 Ga0070658_10000333 3300005327 Bacteria 40582
4 Ga0070668_100018244 3300005347 Bacteria 5265
5 Ga0070667_100176911 3300005367 Bacteria 1886
6 Ga0070684_100040448 3300005535 Bacteria 4015
7 Ga0070665_100000005 3300005548 Bacteria 734905
8 Ga0068856_100232060 3300005614 Bacteria 1860
9 Ga0068863_100000642 3300005841 Bacteria 35460
10 Ga0081455_10025605 3300005937 Bacteria 5441
11 Ga0105244_10017758 3300009036 Bacteria 4011
12 Ga0105237_10061456 3300009545 Bacteria 3756
13 Ga0157371_10127634 3300013102 Bacteria 1809
14 Ga0157372_10248915 3300013307 Bacteria 2063
15 Ga0213876_10003780 3300021384 Bacteria 8585
16 Ga0224712_10060627 3300022467 Bacteria 1506
17 Ga0209784_100225 3300025224 Bacteria 38072
18 Ga0209566_100070 3300025225 Bacteria 176023
19 Ga0209566_100183 3300025225 Bacteria 66605
20 Ga0207705_10002256 3300025909 Bacteria 14904
21 Ga0207695_10002994 3300025913 Bacteria 24282
22 Ga0207695_10066782 3300025913 Bacteria 3692
23 Ga0207649_10137054 3300025920 Bacteria 1670
24 Ga0207700_10215758 3300025928 Bacteria 1624
25 Ga0207661_10016457 3300025944 Bacteria 5456
26 Ga0207668_10032238 3300025972 Bacteria 3460
27 Ga0207641_10006696 3300026088 Bacteria 9656
28 Ga0268266_10000012 3300028379 Bacteria 734912
29 Ga0268264_10000386 3300028381 Bacteria 63458
30 Ga0265327_10000039 3300031251 Bacteria 292334
31 Ga0307513_10005308 3300031456 Bacteria 17040
32 Ga0316578_10040336 3300031728 Bacteria 2699
33 Ga0316577_10072822 3300031733 Bacteria 1918
34 Ga0307414_10030483 3300032004 Bacteria 3524
35 Ga0307414_10061167 3300032004 Bacteria 2666
36 Ga0307414_10145147 3300032004 Bacteria 1863
37 Ga0316593_10000767 3300032168 Bacteria 6358
38 Ga0316574_0073708 3300035398 Bacteria 2159
39 Ga0316582_0048283 3300036647 Bacteria 2691
40 Ga0316584_0037503 3300036712 Bacteria 3601
41 Ga0316584_0047617 3300036712 Bacteria 3203
42 Ga0316584_0087699 3300036712 Bacteria 2329
43 Ga0395899_0032965 3300037312 Bacteria 3892
44 Ga0436364_1042411 3300037853 Bacteria 5405
45 Ga0436364_1141065 3300037853 Bacteria 8525
46 Ga0400484_29289 3300038725 Bacteria 2095
47 Ga0400483_073754 3300039062 Unclassified 2027
48 Ga0400483_211767 3300039062 Bacteria 15434
49 Ga0436365_0656738 3300039437 Bacteria 17604
50 Ga0439439_0001069 3300041406 Bacteria 5215
51 Ga0451837_1283025 3300041494 Bacteria 2449
52 Ga0439449_0000194 3300042007 Bacteria 21188
53 Ga0439462_0008513 3300042015 Bacteria 2589
54 Ga0466969_0027963 3300044656 Bacteria 2885
55 Ga0466961_0036740 3300044693 Bacteria 3144
56 Ga0466959_0082103 3300045049 Bacteria 2322
57 Ga0495592_0014788 3300046454 Eukaryota 5925
58 Ga0495592_0073934 3300046454 Eukaryota 2477
59 Ga0495629_0090104 3300046459 Bacteria 2140
60 Ga0495641_0000553 3300046461 Eukaryota 31535
61 Ga0495641_0007627 3300046461 Eukaryota 6728
62 Ga0495651_0001356 3300046462 Bacteria 18940
63 Ga0495651_0085630 3300046462 Eukaryota 2373
64 Ga0495608_0029797 3300046511 Eukaryota 3699
65 Ga0495618_0012576 3300046514 Eukaryota 5142
66 Ga0495618_0045607 3300046514 Eukaryota 2766
67 Ga0495620_0042638 3300046515 Eukaryota 1981
68 Ga0495628_0010241 3300046516 Eukaryota 7976
69 Ga0495628_0017503 3300046516 Eukaryota 5965
70 Ga0495628_0048159 3300046516 Bacteria 3379
71 Ga0495628_0064118 3300046516 Bacteria 2877
72 Ga0495666_0083366 3300046526 Bacteria 1511
73 Ga0495652_0001454 3300046529 Bacteria 26191
74 Ga0495652_0004720 3300046529 Eukaryota 12981
75 Ga0495652_0034440 3300046529 Eukaryota 4413
76 Ga0495652_0082444 3300046529 Eukaryota 2650
77 Ga0495652_0147105 3300046529 Eukaryota 1845
78 Ga0495640_0059886 3300046533 Bacteria 2591
79 Ga0495586_0076849 3300046535 Bacteria 1830
80 Ga0495645_0009124 3300046543 Eukaryota 6928
81 Ga0495634_0004903 3300046642 Eukaryota 10359
82 Ga0495635_0005339 3300046663 Eukaryota 8942
83 Ga0495635_0191280 3300046663 Bacteria 1389
84 Ga0495657_0001770 3300046675 Eukaryota 18481
85 Ga0495657_0014890 3300046675 Bacteria 5705
86 Ga0495623_0000351 3300046679 Eukaryota 30388
87 Ga0495623_0105363 3300046679 Eukaryota 1714
88 Ga0495646_0001130 3300046680 Eukaryota 15582
89 Ga0495613_0017373 3300046689 Bacteria 5360
90 Ga0495624_0008618 3300046690 Eukaryota 7101
91 Ga0495624_0011347 3300046690 Eukaryota 6122
92 Ga0495600_0002296 3300046809 Bacteria 10905
93 Ga0495600_0086616 3300046809 Eukaryota 2044
94 Ga0495604_0004058 3300047317 Bacteria 11637
95 Ga0495604_0074314 3300047317 Eukaryota 2562
96 Ga0495674_0106015 3300047319 Eukaryota 2387
97 Ga0495676_0000727 3300047321 Eukaryota 27449
98 Ga0495676_0001290 3300047321 Eukaryota 21491
99 Ga0495676_0018755 3300047321 Eukaryota 6099
100 Ga0495676_0176144 3300047321 Eukaryota 1502
101 Ga0495684_0051418 3300047471 Eukaryota 3145
102 Ga0495684_0058413 3300047471 Bacteria 2939
103 Ga0495602_0000589 3300048088 Eukaryota 33998
104 Ga0495602_0002814 3300048088 Eukaryota 17790
105 Ga0495602_0008474 3300048088 Eukaryota 10738
106 Ga0495602_0064019 3300048088 Eukaryota 3182
107 Ga0495614_0018695 3300048089 Bacteria 3001
108 Ga0496101_0002337 3300048904 Bacteria 11627
109 Ga0496104_0008813 3300048907 Bacteria 8968
110 Ga0496105_0040433 3300048908 Unclassified 3845
111 Ga0496107_0025550 3300048910 Unclassified 4183
112 Ga0496108_0009599 3300048911 Bacteria 7843
113 Ga0496109_0013154 3300048912 Bacteria 7161
114 Ga0496110_0017382 3300048913 Bacteria 6016
115 Ga0496111_0017722 3300048914 Bacteria 4925
116 Ga0496112_0203898 3300048915 Bacteria 1936
117 Ga0496114_0002264 3300048917 Bacteria 14652
118 Ga0496115_0017327 3300048918 Bacteria 5504
119 Ga0496116_0004913 3300048919 Bacteria 12595
120 Ga0496116_0045917 3300048919 Bacteria 2952
121 Ga0496117_0005037 3300048920 Bacteria 14166
122 Ga0496118_0019999 3300048921 Bacteria 5958
123 Ga0496119_0017034 3300048922 Bacteria 5493
124 Ga0496120_0063108 3300048923 Bacteria 2062
125 Ga0496121_0000138 3300048924 Bacteria 163543
126 Ga0496121_0000759 3300048924 Bacteria 59261
127 Ga0496122_0016673 3300048925 Bacteria 6927
128 Ga0496122_0049329 3300048925 Bacteria 3225
129 Ga0496122_0115991 3300048925 Bacteria 1743
130 Ga0496123_0075160 3300048926 Bacteria 2086
131 Ga0496124_0007160 3300048927 Bacteria 11932
132 Ga0496124_0008694 3300048927 Bacteria 10559
133 Ga0496124_0097573 3300048927 Bacteria 2386
134 Ga0496125_0000182 3300048928 Bacteria 137747
135 Ga0496125_0001513 3300048928 Bacteria 33304
136 Ga0496125_0002817 3300048928 Bacteria 21947
137 Ga0496125_0088052 3300048928 Bacteria 2342
138 Ga0496126_0024258 3300048929 Bacteria 5857
139 Ga0496126_0079390 3300048929 Bacteria 2905
140 Ga0501032_0000268 3300049569 Bacteria 43730
141 Ga0501033_0000003 3300049570 Bacteria 586973
142 Ga0501034_0001555 3300049571 Bacteria 30027
143 Ga0501037_0134275 3300049573 Bacteria 1773
144 Ga0501046_0001165 3300049580 Bacteria 25587
145 Ga0501047_0039823 3300049581 Bacteria 4545
146 Ga0501047_0131422 3300049581 Bacteria 2384
147 Ga0501070_0158690 3300049586 Bacteria 1865
148 Ga0501080_0164407 3300049742 Bacteria 2048
149 Ga0501035_0048242 3300049822 Bacteria 3819
150 Ga0501044_0001174 3300049823 Bacteria 31048
151 Ga0500578_0002538 3300053086 Eukaryota 15047
152 Ga0500573_0001264 3300053140 Bacteria 11941
153 Ga0500600_0022779 3300053149 Eukaryota 3747
154 Ga0500634_0000065 3300053161 Bacteria 44046
155 2512730673 2512564039 Bacteria 8739048
156 2512732331 2512564039 Bacteria 8739048
157 2512733588 2512564039 Bacteria 8739048
158 2515853004 2515154155 Bacteria 7985436
159 2587739203 2585428059 Bacteria 8696589
160 2595318674 2593339198 Bacteria 7267884
161 2643741059 2643221543 Bacteria 6628015
162 2643965009 2643221591 Bacteria 4397626
163 2644412909 2643221674 Bacteria 3919126
164 2644427983 2643221676 Bacteria 8119172
165 2676475675 2675903058 Bacteria 6822861
166 2676489218 2675903060 Bacteria 10051191
167 2787506566 2786546548 Bacteria 4745694
168 2787507694 2786546548 Bacteria 4745694
169 2787508598 2786546548 Bacteria 4745694
170 2808915627 2808606375 Bacteria 9466072
171 2819570663 2818991441 Bacteria 5062707
172 2819669631 2818991459 Bacteria 8736032
173 2819671984 2818991459 Bacteria 8736032
174 2821113372 2821111986 Bacteria 6894338
175 2827631403 2827628540 Bacteria 6858585
176 2852104887 2852103415 Bacteria 5193810
177 2857456188 2857453340 Bacteria 8090534
178 2857473332 2857472729 Bacteria 6568124
179 2862707264 2862705112 Bacteria 6563286
180 2864737228 2864733723 Bacteria 6770668
181 2868095493 2868088558 Bacteria 7609351
182 2884695466 2884693830 Bacteria 11273186
183 2885526661 2885526491 Bacteria 7164189
184 2889045082 2889042446 Bacteria 7618936
185 2895435069 2895427314 Bacteria 13147766
186 2895445826 2895442618 Bacteria 11027144
187 2904119685 2904113452 Bacteria 7796941
188 2904165216 2904162308 Bacteria 7086713
189 2904491972 2904490793 Bacteria 7046938
190 2904758881 2904755435 Bacteria 7986759
191 2904760662 2904755435 Bacteria 7986759
192 2907202917 2907202186 Bacteria 6632024
193 2919161212 2919160200 Bacteria 6929020
194 2919426097 2919425241 Bacteria 8055701
195 2919427663 2919425241 Bacteria 8055701
196 2919431268 2919425241 Bacteria 8055701
197 2925328387 2925326138 Bacteria 9652120
198 2929143644 2929138655 Bacteria 5810547
199 2931388517 2931384279 Bacteria 7299545
200 2938652861 2938649242 Bacteria 7118381
201 2939682632 2939679117 Bacteria 6921672
202 2945992894 2945991243 Bacteria 7008369
203 2946055632 2946053406 Bacteria 6978655
204 2968563669 2968558590 Bacteria 6956864
205 2971411854 2971410472 Bacteria 8311090
206 2980188820 2980182181 Bacteria 9454109
207 2984530753 2984527788 Bacteria 5288478
208 2984536861 2984532647 Bacteria 5288506
209 2988226012 2988225383 Bacteria 7221625
210 2990044722 2990044586 Bacteria 6603797
211 2996634001 2996632988 Bacteria 6921523
212 3001268899 3001267043 Bacteria 4823521
213 3001276602 3001272096 Bacteria 4729684
214 3006971254 3006969106 Bacteria 4739423
215 3006987338 3006984091 Bacteria 4207523
216 8002318361 8002317523 Bacteria 8051857
217 8008489703 8008485437 Bacteria 7198341
218 8025528721 8025524527 Bacteria 7197316
219 8054804647 8054795415 Bacteria 9785225
220 8055068171 8055066027 Bacteria 9479577
221 8056064586 8056060235 Bacteria 7259403
222 8056538038 8056533031 Bacteria 8964429
223 8057473258 8057473075 Bacteria 5892720
224 Ga0068860_100000091
225 Ga0055538_1000605
226 Ga0070658_10000333
227 Ga0070668_100018244
228 Ga0070667_100176911
229 Ga0070684_100040448
230 Ga0070665_100000005
231 Ga0068856_100232060
232 Ga0068863_100000642
233 Ga0081455_10025605
234 Ga0105244_10017758
235 Ga0105237_10061456
236 Ga0157371_10127634
237 Ga0157372_10248915
238 Ga0213876_10003780
239 Ga0224712_10060627
240 Ga0209784_100225
241 Ga0209566_100070
242 Ga0209566_100183
243 Ga0207705_10002256
244 Ga0207695_10002994
245 Ga0207695_10066782
246 Ga0207649_10137054
247 Ga0207700_10215758
248 Ga0207661_10016457
249 Ga0207668_10032238
250 Ga0207641_10006696
251 Ga0268266_10000012
252 Ga0268264_10000386
253 Ga0265327_10000039
254 Ga0307513_10005308
255 Ga0316578_10040336
256 Ga0316577_10072822
257 Ga0307414_10030483
258 Ga0307414_10061167
259 Ga0307414_10145147
260 Ga0316593_10000767
261 Ga0316574_0073708
262 Ga0316582_0048283
263 Ga0316584_0037503
264 Ga0316584_0047617
265 Ga0316584_0087699
266 Ga0395899_0032965
267 Ga0436364_1042411
268 Ga0436364_1141065
269 Ga0400484_29289
270 Ga0400483_073754
271 Ga0400483_211767
272 Ga0436365_0656738
273 Ga0439439_0001069
274 Ga0451837_1283025
275 Ga0439449_0000194
276 Ga0439462_0008513
277 Ga0466969_0027963
278 Ga0466961_0036740
279 Ga0466959_0082103
280 Ga0495592_0014788
281 Ga0495592_0073934
282 Ga0495629_0090104
283 Ga0495641_0000553
284 Ga0495641_0007627
285 Ga0495651_0001356
286 Ga0495651_0085630
287 Ga0495608_0029797
288 Ga0495618_0012576
289 Ga0495618_0045607
290 Ga0495620_0042638
291 Ga0495628_0010241
292 Ga0495628_0017503
293 Ga0495628_0048159
294 Ga0495628_0064118
295 Ga0495666_0083366
296 Ga0495652_0001454
297 Ga0495652_0004720
298 Ga0495652_0034440
299 Ga0495652_0082444
300 Ga0495652_0147105
301 Ga0495640_0059886
302 Ga0495586_0076849
303 Ga0495645_0009124
304 Ga0495634_0004903
305 Ga0495635_0005339
306 Ga0495635_0191280
307 Ga0495657_0001770
308 Ga0495657_0014890
309 Ga0495623_0000351
310 Ga0495623_0105363
311 Ga0495646_0001130
312 Ga0495613_0017373
313 Ga0495624_0008618
314 Ga0495624_0011347
315 Ga0495600_0002296
316 Ga0495600_0086616
317 Ga0495604_0004058
318 Ga0495604_0074314
319 Ga0495674_0106015
320 Ga0495676_0000727
321 Ga0495676_0001290
322 Ga0495676_0018755
323 Ga0495676_0176144
324 Ga0495684_0051418
325 Ga0495684_0058413
326 Ga0495602_0000589
327 Ga0495602_0002814
328 Ga0495602_0008474
329 Ga0495602_0064019
330 Ga0495614_0018695
331 Ga0496101_0002337
332 Ga0496104_0008813
333 Ga0496105_0040433
334 Ga0496107_0025550
335 Ga0496108_0009599
336 Ga0496109_0013154
337 Ga0496110_0017382
338 Ga0496111_0017722
339 Ga0496112_0203898
340 Ga0496114_0002264
341 Ga0496115_0017327
342 Ga0496116_0004913
343 Ga0496116_0045917
344 Ga0496117_0005037
345 Ga0496118_0019999
346 Ga0496119_0017034
347 Ga0496120_0063108
348 Ga0496121_0000138
349 Ga0496121_0000759
350 Ga0496122_0016673
351 Ga0496122_0049329
352 Ga0496122_0115991
353 Ga0496123_0075160
354 Ga0496124_0007160
355 Ga0496124_0008694
356 Ga0496124_0097573
357 Ga0496125_0000182
358 Ga0496125_0001513
359 Ga0496125_0002817
360 Ga0496125_0088052
361 Ga0496126_0024258
362 Ga0496126_0079390
363 Ga0501032_0000268
364 Ga0501033_0000003
365 Ga0501034_0001555
366 Ga0501037_0134275
367 Ga0501046_0001165
368 Ga0501047_0039823
369 Ga0501047_0131422
370 Ga0501070_0158690
371 Ga0501080_0164407
372 Ga0501035_0048242
373 Ga0501044_0001174
374 Ga0500578_0002538
375 Ga0500573_0001264
376 Ga0500600_0022779
377 Ga0500634_0000065
378 2512730673
379 2512732331
380 2512733588
381 2515853004
382 2587739203
383 2595318674
384 2643741059
385 2643965009
386 2644412909
387 2644427983
388 2676475675
389 2676489218
390 2787506566
391 2787507694
392 2787508598
393 2808915627
394 2819570663
395 2819669631
396 2819671984
397 2821113372
398 2827631403
399 2852104887
400 2857456188
401 2857473332
402 2862707264
403 2864737228
404 2868095493
405 2884695466
406 2885526661
407 2889045082
408 2895435069
409 2895445826
410 2904119685
411 2904165216
412 2904491972
413 2904758881
414 2904760662
415 2907202917
416 2919161212
417 2919426097
418 2919427663
419 2919431268
420 2925328387
421 2929143644
422 2931388517
423 2938652861
424 2939682632
425 2945992894
426 2946055632
427 2968563669
428 2971411854
429 2980188820
430 2984530753
431 2984536861
432 2988226012
433 2990044722
434 2996634001
435 3001268899
436 3001276602
437 3006971254
438 3006987338
439 8002318361
440 8008489703
441 8025528721
442 8054804647
443 8055068171
444 8056064586
445 8056538038
446 8057473258

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

173

355

0.96

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

35

164

0.9

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

176

454

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3q2k-assembly2.cif.gz_L crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.8435 4 422
2glx-assembly1.cif.gz_A crystal structure analysis of bacterial 1,5-af reductase 0.8295 5 423
3q2k-assembly2.cif.gz_L crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.8288 4 422
1zh8-assembly1.cif.gz_B crystal structure of oxidoreductase (tm0312) from thermotoga maritima at 2.50 a resolution 0.8277 4 427
3q2k-assembly1.cif.gz_F crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.8261 4 422
ID Description Score Start End Superfamily
4hktB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8758 4 132 3.40.50.720
1zh8B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.869 4 133 3.40.50.720
4hktB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8621 4 132 3.40.50.720
3e18B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8621 4 132 3.40.50.720
3e18A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8603 3 132 3.40.50.720
ID Description Score Start End GO Terms
AF-V9GB31-F1-model_v4 Myo-inositol 2-dehydrogenase 1 0.9961 110 429
AF-V9GB31-F1-model_v4 Myo-inositol 2-dehydrogenase 1 0.9899 110 429
AF-A0A1Y1ZDT0-F1-model_v4 NAD(P)-binding protein 0.9879 4 429 GO:0000166
AF-A0A1Y1ZDT0-F1-model_v4 NAD(P)-binding protein 0.9788 4 429 GO:0000166
AF-A0A2N5KD94-F1-model_v4 Dehydrogenase 0.9765 1 429 GO:0000166

Map