F335405
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 223 | 129 | 219 | 278 |
Family's Representative Sequence
| Representative Sequence | 3300005843|Ga0068860_100003032|Ga0068860_10000303211 |
| Length | 309 |
| Sequence | MNKPVQERNPQAQQMGDESMARNLAWQAQAIWPQEQALFVRYGLTGALRILDLGCGTGEITRRLADFYPQARIDGVDILEGNLAIARRDSSAYGERISYAVGDAFALEYPDATFDLVVCRHMSQAVPHFDLVLDEIGRVLKPGGWLHLLSEDYAMLRMPRHREPAASPDHGPLPAVHGLQDTRAPARRTGAPVHRDFDPDRFWVDHALPYLESVGCDGRIGRHSPPLLEQRGYTELAVDYIVVDTLRVPRETFANILVAWRDGFAPVLAETTGRPLDDVRADFDTMIADVATPPSYTVWHVPVISARRP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2524614729 | Arenimonas oryziterrae YC6267, DSM 21050 | Isolate | Rhizosphere |
| 2 | 2571042365 | Lysobacter oryzae DSM 21044 | Isolate | Rhizosphere |
| 3 | 2627854209 | Arenimonas oryziterrae YC6267, DSM 21050 | Isolate | Rhizosphere |
| 4 | 2643221695 | Lysobacter sp. Root494 | Isolate | Unclassified |
| 5 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 6 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 8 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 9 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 20 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 21 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 23 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 27 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 29 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 30 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 31 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 32 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 33 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 34 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 35 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 36 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 38 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 39 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300027424 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300027665 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 96 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 97 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 98 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 99 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 100 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 101 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 102 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 103 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 104 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 105 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 106 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 107 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 108 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 109 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 110 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046537 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046664 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 122 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 123 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 125 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 127 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 128 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300053079 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.21 |
| Metatranscriptomes | 0 |
| Isolates | 1.79 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.45 |
| Nodule | 0 |
| Rhizoplane | 0.9 |
| Rhizosphere | 96.41 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.24 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0065715_10012716 | 3300005293 | Bacteria | 2354 |
| 2 | Ga0065715_10312395 | 3300005293 | Bacteria | 1018 |
| 3 | Ga0065715_10335069 | 3300005293 | Bacteria | 977 |
| 4 | Ga0070676_10056536 | 3300005328 | Bacteria | 2319 |
| 5 | Ga0070683_100788058 | 3300005329 | Bacteria | 911 |
| 6 | Ga0070690_100039395 | 3300005330 | Bacteria | 2986 |
| 7 | Ga0070670_100244102 | 3300005331 | Unclassified | 1564 |
| 8 | Ga0070670_100268427 | 3300005331 | Bacteria | 1488 |
| 9 | Ga0070666_10000314 | 3300005335 | Bacteria | 31000 |
| 10 | Ga0070666_10110397 | 3300005335 | Unclassified | 1901 |
| 11 | Ga0070668_100001298 | 3300005347 | Bacteria | 17865 |
| 12 | Ga0070668_100014021 | 3300005347 | Bacteria | 5993 |
| 13 | Ga0070668_100100462 | 3300005347 | Bacteria | 2292 |
| 14 | Ga0070669_100092416 | 3300005353 | Bacteria | 2271 |
| 15 | Ga0070675_100221733 | 3300005354 | Bacteria | 1647 |
| 16 | Ga0070671_100449114 | 3300005355 | Unclassified | 1106 |
| 17 | Ga0070674_100026690 | 3300005356 | Bacteria | 3776 |
| 18 | Ga0070667_100030420 | 3300005367 | Bacteria | 4503 |
| 19 | Ga0070667_100097085 | 3300005367 | Bacteria | 2542 |
| 20 | Ga0070678_100011604 | 3300005456 | Bacteria | 5443 |
| 21 | Ga0070662_100315236 | 3300005457 | Bacteria | 1274 |
| 22 | Ga0068867_100006655 | 3300005459 | Bacteria | 8171 |
| 23 | Ga0068867_100017158 | 3300005459 | Bacteria | 5143 |
| 24 | Ga0068867_100036783 | 3300005459 | Bacteria | 3555 |
| 25 | Ga0070685_10014890 | 3300005466 | Bacteria | 4126 |
| 26 | Ga0070699_100198444 | 3300005518 | Bacteria | 1784 |
| 27 | Ga0068853_100005984 | 3300005539 | Bacteria | 9616 |
| 28 | Ga0068853_100115297 | 3300005539 | Bacteria | 2391 |
| 29 | Ga0068853_100125052 | 3300005539 | Bacteria | 2297 |
| 30 | Ga0068853_100244216 | 3300005539 | Unclassified | 1646 |
| 31 | Ga0070672_100000955 | 3300005543 | Bacteria | 17423 |
| 32 | Ga0070672_100015083 | 3300005543 | Bacteria | 5493 |
| 33 | Ga0070672_100540689 | 3300005543 | Bacteria | 1011 |
| 34 | Ga0070693_100014096 | 3300005547 | Bacteria | 4087 |
| 35 | Ga0070665_100163873 | 3300005548 | Bacteria | 2225 |
| 36 | Ga0070665_100501817 | 3300005548 | Bacteria | 1224 |
| 37 | Ga0068855_100007881 | 3300005563 | Bacteria | 12864 |
| 38 | Ga0068855_100131922 | 3300005563 | Bacteria | 2853 |
| 39 | Ga0070664_100289050 | 3300005564 | Bacteria | 1480 |
| 40 | Ga0068852_100096050 | 3300005616 | Bacteria | 2663 |
| 41 | Ga0068852_100133851 | 3300005616 | Bacteria | 2286 |
| 42 | Ga0068859_100007069 | 3300005617 | Bacteria | 11397 |
| 43 | Ga0068859_100102411 | 3300005617 | Bacteria | 2921 |
| 44 | Ga0068859_100423818 | 3300005617 | Bacteria | 1427 |
| 45 | Ga0068859_100534039 | 3300005617 | Bacteria | 1268 |
| 46 | Ga0068864_100057282 | 3300005618 | Bacteria | 3367 |
| 47 | Ga0068864_100660961 | 3300005618 | Bacteria | 1018 |
| 48 | Ga0068851_10009249 | 3300005834 | Bacteria | 4575 |
| 49 | Ga0068870_10010265 | 3300005840 | Bacteria | 4295 |
| 50 | Ga0068863_100000945 | 3300005841 | Bacteria | 29155 |
| 51 | Ga0068863_100011845 | 3300005841 | Bacteria | 8429 |
| 52 | Ga0068863_100032416 | 3300005841 | Bacteria | 4981 |
| 53 | Ga0068863_100073818 | 3300005841 | Bacteria | 3227 |
| 54 | Ga0068863_100096069 | 3300005841 | Bacteria | 2813 |
| 55 | Ga0068860_100001333 | 3300005843 | Bacteria | 26831 |
| 56 | Ga0068860_100003032 | 3300005843 | Bacteria | 17342 |
| 57 | Ga0068860_100220839 | 3300005843 | Bacteria | 1840 |
| 58 | Ga0068862_100000354 | 3300005844 | Bacteria | 49717 |
| 59 | Ga0097621_100013278 | 3300006237 | Bacteria | 6134 |
| 60 | Ga0097621_100039914 | 3300006237 | Bacteria | 3771 |
| 61 | Ga0068871_100035382 | 3300006358 | Bacteria | 3968 |
| 62 | Ga0068871_100170423 | 3300006358 | Bacteria | 1866 |
| 63 | Ga0068871_100540823 | 3300006358 | Bacteria | 1054 |
| 64 | Ga0068865_100032240 | 3300006881 | Bacteria | 3499 |
| 65 | Ga0068865_100060258 | 3300006881 | Bacteria | 2657 |
| 66 | Ga0097620_100007069 | 3300006931 | Bacteria | 11397 |
| 67 | Ga0097620_100102414 | 3300006931 | Bacteria | 2921 |
| 68 | Ga0097620_100423801 | 3300006931 | Bacteria | 1427 |
| 69 | Ga0097620_100534038 | 3300006931 | Bacteria | 1268 |
| 70 | Ga0105240_10003022 | 3300009093 | Bacteria | 26452 |
| 71 | Ga0105240_10031342 | 3300009093 | Bacteria | 6897 |
| 72 | Ga0111539_10031077 | 3300009094 | Bacteria | 6489 |
| 73 | Ga0105245_10171512 | 3300009098 | Bacteria | 2066 |
| 74 | Ga0105243_10269905 | 3300009148 | Bacteria | 1527 |
| 75 | Ga0105241_10004836 | 3300009174 | Bacteria | 9931 |
| 76 | Ga0105242_10002824 | 3300009176 | Bacteria | 13606 |
| 77 | Ga0105242_10377768 | 3300009176 | Bacteria | 1316 |
| 78 | Ga0105248_10077041 | 3300009177 | Bacteria | 3748 |
| 79 | Ga0105248_10304818 | 3300009177 | Bacteria | 1794 |
| 80 | Ga0105248_10322211 | 3300009177 | Bacteria | 1741 |
| 81 | Ga0105237_10057221 | 3300009545 | Bacteria | 3903 |
| 82 | Ga0105237_10193263 | 3300009545 | Bacteria | 2035 |
| 83 | Ga0105238_10002470 | 3300009551 | Bacteria | 18501 |
| 84 | Ga0105238_10078923 | 3300009551 | Bacteria | 3282 |
| 85 | Ga0105249_10351673 | 3300009553 | Bacteria | 1493 |
| 86 | Ga0105239_10013828 | 3300010375 | Bacteria | 8957 |
| 87 | Ga0105239_10062196 | 3300010375 | Bacteria | 4098 |
| 88 | Ga0105239_10064936 | 3300010375 | Bacteria | 4007 |
| 89 | Ga0157371_10048478 | 3300013102 | Bacteria | 3019 |
| 90 | Ga0157371_10053845 | 3300013102 | Bacteria | 2858 |
| 91 | Ga0157371_10206230 | 3300013102 | Bacteria | 1410 |
| 92 | Ga0157369_10000011 | 3300013105 | Bacteria | 271560 |
| 93 | Ga0157374_10298335 | 3300013296 | Bacteria | 1594 |
| 94 | Ga0157378_10000016 | 3300013297 | Bacteria | 142649 |
| 95 | Ga0157378_10255519 | 3300013297 | Bacteria | 1679 |
| 96 | Ga0157378_10297160 | 3300013297 | Bacteria | 1562 |
| 97 | Ga0163162_10011752 | 3300013306 | Bacteria | 8540 |
| 98 | Ga0163162_10070020 | 3300013306 | Bacteria | 3559 |
| 99 | Ga0157372_10083757 | 3300013307 | Bacteria | 3613 |
| 100 | Ga0157375_10000948 | 3300013308 | Bacteria | 25130 |
| 101 | Ga0157375_10017579 | 3300013308 | Bacteria | 6456 |
| 102 | Ga0157375_10118269 | 3300013308 | Bacteria | 2756 |
| 103 | Ga0157375_10505761 | 3300013308 | Bacteria | 1372 |
| 104 | Ga0163163_10005123 | 3300014325 | Bacteria | 11298 |
| 105 | Ga0157379_10003292 | 3300014968 | Bacteria | 13669 |
| 106 | Ga0157379_10038909 | 3300014968 | Bacteria | 4242 |
| 107 | Ga0157376_10002231 | 3300014969 | Bacteria | 13060 |
| 108 | Ga0157376_10004551 | 3300014969 | Bacteria | 9654 |
| 109 | Ga0157376_10014847 | 3300014969 | Bacteria | 5862 |
| 110 | Ga0157376_10144815 | 3300014969 | Unclassified | 2136 |
| 111 | Ga0157376_10239391 | 3300014969 | Bacteria | 1690 |
| 112 | Ga0157376_10474002 | 3300014969 | Bacteria | 1225 |
| 113 | Ga0207656_10075610 | 3300025321 | Bacteria | 1505 |
| 114 | Ga0207680_10000560 | 3300025903 | Bacteria | 17593 |
| 115 | Ga0207645_10147537 | 3300025907 | Bacteria | 1534 |
| 116 | Ga0207654_10012892 | 3300025911 | Bacteria | 4288 |
| 117 | Ga0207695_10006519 | 3300025913 | Bacteria | 15111 |
| 118 | Ga0207695_10010557 | 3300025913 | Bacteria | 11294 |
| 119 | Ga0207671_10003152 | 3300025914 | Bacteria | 16693 |
| 120 | Ga0207663_10169357 | 3300025916 | Unclassified | 1550 |
| 121 | Ga0207657_10002986 | 3300025919 | Bacteria | 18132 |
| 122 | Ga0207652_10360812 | 3300025921 | Bacteria | 1312 |
| 123 | Ga0207681_10125703 | 3300025923 | Bacteria | 1888 |
| 124 | Ga0207681_10152188 | 3300025923 | Bacteria | 1735 |
| 125 | Ga0207694_10001336 | 3300025924 | Bacteria | 21229 |
| 126 | Ga0207694_10088578 | 3300025924 | Bacteria | 2440 |
| 127 | Ga0207644_10361428 | 3300025931 | Bacteria | 1181 |
| 128 | Ga0207706_10208163 | 3300025933 | Bacteria | 1715 |
| 129 | Ga0207706_10323983 | 3300025933 | Bacteria | 1341 |
| 130 | Ga0207686_10008818 | 3300025934 | Bacteria | 5452 |
| 131 | Ga0207686_10221502 | 3300025934 | Bacteria | 1366 |
| 132 | Ga0207669_10020305 | 3300025937 | Bacteria | 3481 |
| 133 | Ga0207704_10006298 | 3300025938 | Bacteria | 5522 |
| 134 | Ga0207704_10149034 | 3300025938 | Bacteria | 1648 |
| 135 | Ga0207691_10000857 | 3300025940 | Bacteria | 30186 |
| 136 | Ga0207691_10027175 | 3300025940 | Bacteria | 5368 |
| 137 | Ga0207691_10508244 | 3300025940 | Bacteria | 1023 |
| 138 | Ga0207711_10267343 | 3300025941 | Bacteria | 1573 |
| 139 | Ga0207711_10310538 | 3300025941 | Bacteria | 1456 |
| 140 | Ga0207689_10032582 | 3300025942 | Bacteria | 4334 |
| 141 | Ga0207689_10085741 | 3300025942 | Bacteria | 2589 |
| 142 | Ga0207689_10326816 | 3300025942 | Bacteria | 1273 |
| 143 | Ga0207679_10077503 | 3300025945 | Bacteria | 2529 |
| 144 | Ga0207712_10011265 | 3300025961 | Bacteria | 5693 |
| 145 | Ga0207668_10095964 | 3300025972 | Bacteria | 2190 |
| 146 | Ga0207668_10134578 | 3300025972 | Bacteria | 1892 |
| 147 | Ga0207668_10170895 | 3300025972 | Bacteria | 1704 |
| 148 | Ga0207658_10123390 | 3300025986 | Bacteria | 2069 |
| 149 | Ga0207658_10160522 | 3300025986 | Bacteria | 1842 |
| 150 | Ga0207639_10000158 | 3300026041 | Bacteria | 51667 |
| 151 | Ga0207639_10038014 | 3300026041 | Bacteria | 3578 |
| 152 | Ga0207639_10050307 | 3300026041 | Bacteria | 3165 |
| 153 | Ga0207639_10115528 | 3300026041 | Bacteria | 2195 |
| 154 | Ga0207639_10177168 | 3300026041 | Unclassified | 1811 |
| 155 | Ga0207641_10013762 | 3300026088 | Bacteria | 6635 |
| 156 | Ga0207641_10081206 | 3300026088 | Bacteria | 2815 |
| 157 | Ga0207648_10042789 | 3300026089 | Bacteria | 3977 |
| 158 | Ga0207648_10057053 | 3300026089 | Bacteria | 3407 |
| 159 | Ga0207648_10077048 | 3300026089 | Bacteria | 2906 |
| 160 | Ga0207676_10001910 | 3300026095 | Bacteria | 15220 |
| 161 | Ga0207676_10031518 | 3300026095 | Bacteria | 3988 |
| 162 | Ga0207676_10539310 | 3300026095 | Bacteria | 1113 |
| 163 | Ga0207683_10011969 | 3300026121 | Bacteria | 7405 |
| 164 | Ga0207683_10014525 | 3300026121 | Bacteria | 6707 |
| 165 | Ga0207683_10234431 | 3300026121 | Unclassified | 1674 |
| 166 | Ga0209984_1009167 | 3300027424 | Bacteria | 1254 |
| 167 | Ga0209983_1000775 | 3300027665 | Bacteria | 6956 |
| 168 | Ga0209983_1033409 | 3300027665 | Unclassified | 1101 |
| 169 | Ga0209974_10003447 | 3300027876 | Bacteria | 5708 |
| 170 | Ga0209974_10007226 | 3300027876 | Bacteria | 3834 |
| 171 | Ga0268266_10200750 | 3300028379 | Bacteria | 1825 |
| 172 | Ga0268266_10213128 | 3300028379 | Bacteria | 1772 |
| 173 | Ga0268266_10261049 | 3300028379 | Bacteria | 1605 |
| 174 | Ga0268265_10000775 | 3300028380 | Bacteria | 30819 |
| 175 | Ga0268264_10125061 | 3300028381 | Bacteria | 2271 |
| 176 | Ga0268264_10221111 | 3300028381 | Bacteria | 1743 |
| 177 | Ga0307509_10024458 | 3300031507 | Bacteria | 6763 |
| 178 | Ga0307408_100250133 | 3300031548 | Bacteria | 1461 |
| 179 | Ga0307516_10082604 | 3300031730 | Bacteria | 3054 |
| 180 | Ga0307516_10168682 | 3300031730 | Bacteria | 1931 |
| 181 | Ga0307405_10258335 | 3300031731 | Bacteria | 1300 |
| 182 | Ga0307405_10364880 | 3300031731 | Bacteria | 1119 |
| 183 | Ga0307413_10158525 | 3300031824 | Bacteria | 1587 |
| 184 | Ga0307406_10197201 | 3300031901 | Bacteria | 1479 |
| 185 | Ga0307415_100126686 | 3300032126 | Bacteria | 1926 |
| 186 | Ga0307415_100191859 | 3300032126 | Bacteria | 1613 |
| 187 | Ga0307507_10181936 | 3300033179 | Unclassified | 1500 |
| 188 | Ga0373937_0097605 | 3300036401 | Bacteria | 2725 |
| 189 | Ga0373937_0904856 | 3300036401 | Bacteria | 831 |
| 190 | Ga0395900_0162023 | 3300037418 | Bacteria | 2281 |
| 191 | Ga0395898_0154438 | 3300037466 | Bacteria | 2195 |
| 192 | Ga0395905_0272276 | 3300037471 | Bacteria | 1579 |
| 193 | Ga0439436_0056103 | 3300041404 | Unclassified | 1106 |
| 194 | Ga0439432_001368 | 3300042006 | Bacteria | 9235 |
| 195 | Ga0439432_009683 | 3300042006 | Bacteria | 3353 |
| 196 | Ga0439449_0001494 | 3300042007 | Bacteria | 9166 |
| 197 | Ga0439449_0003503 | 3300042007 | Bacteria | 6098 |
| 198 | Ga0495580_0069294 | 3300046472 | Bacteria | 2465 |
| 199 | Ga0495639_0038485 | 3300046475 | Bacteria | 2148 |
| 200 | Ga0495598_0008437 | 3300046537 | Bacteria | 2400 |
| 201 | Ga0495621_0101415 | 3300046539 | Bacteria | 1096 |
| 202 | Ga0495645_0048828 | 3300046543 | Bacteria | 3082 |
| 203 | Ga0495656_0023621 | 3300046615 | Bacteria | 2421 |
| 204 | Ga0495656_0207460 | 3300046615 | Bacteria | 975 |
| 205 | Ga0495659_0024386 | 3300046664 | Bacteria | 2063 |
| 206 | Ga0495658_0089566 | 3300046683 | Bacteria | 1820 |
| 207 | Ga0495670_0037175 | 3300046691 | Bacteria | 2427 |
| 208 | Ga0495636_0000456 | 3300047318 | Bacteria | 15161 |
| 209 | Ga0495636_0002010 | 3300047318 | Bacteria | 7791 |
| 210 | Ga0495672_0094261 | 3300047320 | Bacteria | 1637 |
| 211 | Ga0496104_0000018 | 3300048907 | Bacteria | 258184 |
| 212 | Ga0496105_0000080 | 3300048908 | Bacteria | 70744 |
| 213 | Ga0501031_0289668 | 3300049568 | Bacteria | 1062 |
| 214 | Ga0501034_0152864 | 3300049571 | Bacteria | 2283 |
| 215 | Ga0501047_0178463 | 3300049581 | Bacteria | 1991 |
| 216 | Ga0501070_0296826 | 3300049586 | Bacteria | 1317 |
| 217 | Ga0501225_0014387 | 3300049705 | Bacteria | 2210 |
| 218 | Ga0501035_0059229 | 3300049822 | Bacteria | 3410 |
| 219 | Ga0500610_0000977 | 3300053079 | Bacteria | 9280 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300009094 | Ga0111539_10031077 | Ga0111539_100310774 | 226 |
| 2 | 3300036401 | Ga0373937_0904856 | Ga0373937_0904856_12_815 | 233 |
| 3 | 3300005328 | Ga0070676_10056536 | Ga0070676_100565361 | 262 |
| 4 | 3300006881 | Ga0068865_100032240 | Ga0068865_1000322402 | 262 |
| 5 | 3300025938 | Ga0207704_10149034 | Ga0207704_101490341 | 262 |
| 6 | iso_pu_bacteria | 2524614729 | 2525555661 | 268 |
| 7 | iso_pu_bacteria | 2627854209 | 2630650675 | 268 |
| 8 | 3300014968 | Ga0157379_10038909 | Ga0157379_100389092 | 269 |
| 9 | iso_pu_bacteria | 2571042365 | 2572254068 | 269 |
| 10 | iso_pu_bacteria | 2643221695 | 2644529194 | 269 |
| 11 | 3300005518 | Ga0070699_100198444 | Ga0070699_1001984442 | 270 |
| 12 | 3300005547 | Ga0070693_100014096 | Ga0070693_1000140964 | 270 |
| 13 | 3300013297 | Ga0157378_10000016 | Ga0157378_1000001696 | 270 |
| 14 | 3300031731 | Ga0307405_10364880 | Ga0307405_103648802 | 270 |
| 15 | 3300046683 | Ga0495658_0089566 | Ga0495658_0089566_291_1103 | 270 |
| 16 | 3300009098 | Ga0105245_10171512 | Ga0105245_101715121 | 271 |
| 17 | 3300009177 | Ga0105248_10077041 | Ga0105248_100770414 | 271 |
| 18 | 3300009545 | Ga0105237_10193263 | Ga0105237_101932633 | 271 |
| 19 | 3300010375 | Ga0105239_10062196 | Ga0105239_100621965 | 271 |
| 20 | 3300013306 | Ga0163162_10011752 | Ga0163162_100117522 | 271 |
| 21 | 3300013308 | Ga0157375_10505761 | Ga0157375_105057612 | 271 |
| 22 | 3300025941 | Ga0207711_10310538 | Ga0207711_103105382 | 271 |
| 23 | 3300031730 | Ga0307516_10168682 | Ga0307516_101686822 | 271 |
| 24 | 3300049568 | Ga0501031_0289668 | Ga0501031_0289668_132_956 | 271 |
| 25 | 3300049571 | Ga0501034_0152864 | Ga0501034_0152864_1210_2034 | 271 |
| 26 | 3300049581 | Ga0501047_0178463 | Ga0501047_0178463_135_959 | 271 |
| 27 | 3300049586 | Ga0501070_0296826 | Ga0501070_0296826_463_1287 | 271 |
| 28 | 3300049822 | Ga0501035_0059229 | Ga0501035_0059229_1341_2165 | 271 |
| 29 | 3300005329 | Ga0070683_100788058 | Ga0070683_1007880581 | 272 |
| 30 | 3300005330 | Ga0070690_100039395 | Ga0070690_1000393952 | 272 |
| 31 | 3300005331 | Ga0070670_100268427 | Ga0070670_1002684272 | 272 |
| 32 | 3300005335 | Ga0070666_10000314 | Ga0070666_1000031422 | 272 |
| 33 | 3300005347 | Ga0070668_100001298 | Ga0070668_1000012985 | 272 |
| 34 | 3300005347 | Ga0070668_100014021 | Ga0070668_1000140214 | 272 |
| 35 | 3300005347 | Ga0070668_100100462 | Ga0070668_1001004623 | 272 |
| 36 | 3300005353 | Ga0070669_100092416 | Ga0070669_1000924162 | 272 |
| 37 | 3300005356 | Ga0070674_100026690 | Ga0070674_1000266904 | 272 |
| 38 | 3300005367 | Ga0070667_100030420 | Ga0070667_1000304204 | 272 |
| 39 | 3300005367 | Ga0070667_100097085 | Ga0070667_1000970852 | 272 |
| 40 | 3300005457 | Ga0070662_100315236 | Ga0070662_1003152362 | 272 |
| 41 | 3300005459 | Ga0068867_100006655 | Ga0068867_1000066552 | 272 |
| 42 | 3300005459 | Ga0068867_100017158 | Ga0068867_1000171582 | 272 |
| 43 | 3300005466 | Ga0070685_10014890 | Ga0070685_100148902 | 272 |
| 44 | 3300005539 | Ga0068853_100005984 | Ga0068853_1000059848 | 272 |
| 45 | 3300005539 | Ga0068853_100115297 | Ga0068853_1001152972 | 272 |
| 46 | 3300005539 | Ga0068853_100125052 | Ga0068853_1001250522 | 272 |
| 47 | 3300005543 | Ga0070672_100000955 | Ga0070672_10000095519 | 272 |
| 48 | 3300005543 | Ga0070672_100015083 | Ga0070672_1000150834 | 272 |
| 49 | 3300005543 | Ga0070672_100540689 | Ga0070672_1005406891 | 272 |
| 50 | 3300005548 | Ga0070665_100163873 | Ga0070665_1001638732 | 272 |
| 51 | 3300005548 | Ga0070665_100501817 | Ga0070665_1005018171 | 272 |
| 52 | 3300005563 | Ga0068855_100007881 | Ga0068855_1000078816 | 272 |
| 53 | 3300005563 | Ga0068855_100131922 | Ga0068855_1001319223 | 272 |
| 54 | 3300005564 | Ga0070664_100289050 | Ga0070664_1002890502 | 272 |
| 55 | 3300005616 | Ga0068852_100096050 | Ga0068852_1000960502 | 272 |
| 56 | 3300005616 | Ga0068852_100133851 | Ga0068852_1001338512 | 272 |
| 57 | 3300005617 | Ga0068859_100007069 | Ga0068859_1000070693 | 272 |
| 58 | 3300005617 | Ga0068859_100102411 | Ga0068859_1001024113 | 272 |
| 59 | 3300005617 | Ga0068859_100534039 | Ga0068859_1005340392 | 272 |
| 60 | 3300005618 | Ga0068864_100057282 | Ga0068864_1000572822 | 272 |
| 61 | 3300005834 | Ga0068851_10009249 | Ga0068851_100092492 | 272 |
| 62 | 3300005841 | Ga0068863_100000945 | Ga0068863_1000009456 | 272 |
| 63 | 3300005841 | Ga0068863_100011845 | Ga0068863_1000118452 | 272 |
| 64 | 3300005841 | Ga0068863_100032416 | Ga0068863_1000324162 | 272 |
| 65 | 3300005841 | Ga0068863_100073818 | Ga0068863_1000738182 | 272 |
| 66 | 3300005843 | Ga0068860_100001333 | Ga0068860_10000133323 | 272 |
| 67 | 3300005843 | Ga0068860_100220839 | Ga0068860_1002208392 | 272 |
| 68 | 3300005844 | Ga0068862_100000354 | Ga0068862_1000003543 | 272 |
| 69 | 3300006237 | Ga0097621_100013278 | Ga0097621_1000132785 | 272 |
| 70 | 3300006358 | Ga0068871_100540823 | Ga0068871_1005408232 | 272 |
| 71 | 3300006931 | Ga0097620_100007069 | Ga0097620_1000070693 | 272 |
| 72 | 3300006931 | Ga0097620_100102414 | Ga0097620_1001024143 | 272 |
| 73 | 3300006931 | Ga0097620_100534038 | Ga0097620_1005340382 | 272 |
| 74 | 3300009093 | Ga0105240_10003022 | Ga0105240_1000302215 | 272 |
| 75 | 3300009148 | Ga0105243_10269905 | Ga0105243_102699052 | 272 |
| 76 | 3300009176 | Ga0105242_10377768 | Ga0105242_103777682 | 272 |
| 77 | 3300009177 | Ga0105248_10322211 | Ga0105248_103222113 | 272 |
| 78 | 3300009545 | Ga0105237_10057221 | Ga0105237_100572212 | 272 |
| 79 | 3300009553 | Ga0105249_10351673 | Ga0105249_103516732 | 272 |
| 80 | 3300010375 | Ga0105239_10064936 | Ga0105239_100649362 | 272 |
| 81 | 3300013102 | Ga0157371_10053845 | Ga0157371_100538451 | 272 |
| 82 | 3300013296 | Ga0157374_10298335 | Ga0157374_102983351 | 272 |
| 83 | 3300013297 | Ga0157378_10255519 | Ga0157378_102555193 | 272 |
| 84 | 3300013308 | Ga0157375_10017579 | Ga0157375_100175793 | 272 |
| 85 | 3300013308 | Ga0157375_10118269 | Ga0157375_101182693 | 272 |
| 86 | 3300014325 | Ga0163163_10005123 | Ga0163163_100051235 | 272 |
| 87 | 3300014968 | Ga0157379_10003292 | Ga0157379_1000329215 | 272 |
| 88 | 3300014969 | Ga0157376_10004551 | Ga0157376_1000455112 | 272 |
| 89 | 3300014969 | Ga0157376_10474002 | Ga0157376_104740021 | 272 |
| 90 | 3300025321 | Ga0207656_10075610 | Ga0207656_100756102 | 272 |
| 91 | 3300025903 | Ga0207680_10000560 | Ga0207680_100005607 | 272 |
| 92 | 3300025907 | Ga0207645_10147537 | Ga0207645_101475371 | 272 |
| 93 | 3300025913 | Ga0207695_10010557 | Ga0207695_100105575 | 272 |
| 94 | 3300025923 | Ga0207681_10125703 | Ga0207681_101257032 | 272 |
| 95 | 3300025933 | Ga0207706_10208163 | Ga0207706_102081632 | 272 |
| 96 | 3300025933 | Ga0207706_10323983 | Ga0207706_103239832 | 272 |
| 97 | 3300025934 | Ga0207686_10221502 | Ga0207686_102215021 | 272 |
| 98 | 3300025937 | Ga0207669_10020305 | Ga0207669_100203052 | 272 |
| 99 | 3300025938 | Ga0207704_10006298 | Ga0207704_100062984 | 272 |
| 100 | 3300025940 | Ga0207691_10000857 | Ga0207691_1000085712 | 272 |
| 101 | 3300025940 | Ga0207691_10027175 | Ga0207691_100271753 | 272 |
| 102 | 3300025940 | Ga0207691_10508244 | Ga0207691_105082441 | 272 |
| 103 | 3300025942 | Ga0207689_10085741 | Ga0207689_100857412 | 272 |
| 104 | 3300025942 | Ga0207689_10326816 | Ga0207689_103268161 | 272 |
| 105 | 3300025945 | Ga0207679_10077503 | Ga0207679_100775032 | 272 |
| 106 | 3300025961 | Ga0207712_10011265 | Ga0207712_100112652 | 272 |
| 107 | 3300025972 | Ga0207668_10134578 | Ga0207668_101345781 | 272 |
| 108 | 3300025972 | Ga0207668_10170895 | Ga0207668_101708951 | 272 |
| 109 | 3300025986 | Ga0207658_10123390 | Ga0207658_101233901 | 272 |
| 110 | 3300025986 | Ga0207658_10160522 | Ga0207658_101605222 | 272 |
| 111 | 3300026041 | Ga0207639_10000158 | Ga0207639_1000015824 | 272 |
| 112 | 3300026041 | Ga0207639_10038014 | Ga0207639_100380143 | 272 |
| 113 | 3300026041 | Ga0207639_10050307 | Ga0207639_100503074 | 272 |
| 114 | 3300026088 | Ga0207641_10013762 | Ga0207641_100137622 | 272 |
| 115 | 3300026089 | Ga0207648_10042789 | Ga0207648_100427892 | 272 |
| 116 | 3300026089 | Ga0207648_10077048 | Ga0207648_100770482 | 272 |
| 117 | 3300026095 | Ga0207676_10001910 | Ga0207676_1000191014 | 272 |
| 118 | 3300026095 | Ga0207676_10031518 | Ga0207676_100315183 | 272 |
| 119 | 3300026121 | Ga0207683_10234431 | Ga0207683_102344312 | 272 |
| 120 | 3300028379 | Ga0268266_10213128 | Ga0268266_102131282 | 272 |
| 121 | 3300028379 | Ga0268266_10261049 | Ga0268266_102610492 | 272 |
| 122 | 3300028380 | Ga0268265_10000775 | Ga0268265_1000077531 | 272 |
| 123 | 3300028381 | Ga0268264_10221111 | Ga0268264_102211112 | 272 |
| 124 | 3300031507 | Ga0307509_10024458 | Ga0307509_100244585 | 272 |
| 125 | 3300031730 | Ga0307516_10082604 | Ga0307516_100826041 | 272 |
| 126 | 3300031824 | Ga0307413_10158525 | Ga0307413_101585252 | 272 |
| 127 | 3300032126 | Ga0307415_100126686 | Ga0307415_1001266862 | 272 |
| 128 | 3300033179 | Ga0307507_10181936 | Ga0307507_101819362 | 272 |
| 129 | 3300046537 | Ga0495598_0008437 | Ga0495598_0008437_906_1727 | 272 |
| 130 | 3300046543 | Ga0495645_0048828 | Ga0495645_0048828_794_1684 | 272 |
| 131 | 3300046615 | Ga0495656_0207460 | Ga0495656_0207460_68_895 | 272 |
| 132 | 3300047320 | Ga0495672_0094261 | Ga0495672_0094261_641_1495 | 272 |
| 133 | 3300053079 | Ga0500610_0000977 | Ga0500610_0000977_325_1143 | 272 |
| 134 | 3300005293 | Ga0065715_10012716 | Ga0065715_100127162 | 273 |
| 135 | 3300005293 | Ga0065715_10312395 | Ga0065715_103123951 | 273 |
| 136 | 3300005293 | Ga0065715_10335069 | Ga0065715_103350691 | 273 |
| 137 | 3300005331 | Ga0070670_100244102 | Ga0070670_1002441022 | 273 |
| 138 | 3300005335 | Ga0070666_10110397 | Ga0070666_101103972 | 273 |
| 139 | 3300005354 | Ga0070675_100221733 | Ga0070675_1002217332 | 273 |
| 140 | 3300005355 | Ga0070671_100449114 | Ga0070671_1004491141 | 273 |
| 141 | 3300005456 | Ga0070678_100011604 | Ga0070678_1000116042 | 273 |
| 142 | 3300005459 | Ga0068867_100036783 | Ga0068867_1000367832 | 273 |
| 143 | 3300005539 | Ga0068853_100244216 | Ga0068853_1002442161 | 273 |
| 144 | 3300005617 | Ga0068859_100423818 | Ga0068859_1004238181 | 273 |
| 145 | 3300005618 | Ga0068864_100660961 | Ga0068864_1006609611 | 273 |
| 146 | 3300005840 | Ga0068870_10010265 | Ga0068870_100102652 | 273 |
| 147 | 3300005841 | Ga0068863_100096069 | Ga0068863_1000960691 | 273 |
| 148 | 3300005843 | Ga0068860_100003032 | Ga0068860_10000303211 | 273 |
| 149 | 3300006237 | Ga0097621_100039914 | Ga0097621_1000399142 | 273 |
| 150 | 3300006358 | Ga0068871_100035382 | Ga0068871_1000353822 | 273 |
| 151 | 3300006358 | Ga0068871_100170423 | Ga0068871_1001704232 | 273 |
| 152 | 3300006881 | Ga0068865_100060258 | Ga0068865_1000602582 | 273 |
| 153 | 3300006931 | Ga0097620_100423801 | Ga0097620_1004238011 | 273 |
| 154 | 3300009093 | Ga0105240_10031342 | Ga0105240_100313422 | 273 |
| 155 | 3300009174 | Ga0105241_10004836 | Ga0105241_1000483610 | 273 |
| 156 | 3300009176 | Ga0105242_10002824 | Ga0105242_100028247 | 273 |
| 157 | 3300009177 | Ga0105248_10304818 | Ga0105248_103048182 | 273 |
| 158 | 3300009551 | Ga0105238_10002470 | Ga0105238_100024702 | 273 |
| 159 | 3300009551 | Ga0105238_10078923 | Ga0105238_100789234 | 273 |
| 160 | 3300010375 | Ga0105239_10013828 | Ga0105239_100138286 | 273 |
| 161 | 3300013102 | Ga0157371_10048478 | Ga0157371_100484783 | 273 |
| 162 | 3300013102 | Ga0157371_10206230 | Ga0157371_102062301 | 273 |
| 163 | 3300013105 | Ga0157369_10000011 | Ga0157369_10000011100 | 273 |
| 164 | 3300013297 | Ga0157378_10297160 | Ga0157378_102971602 | 273 |
| 165 | 3300013306 | Ga0163162_10070020 | Ga0163162_100700203 | 273 |
| 166 | 3300013307 | Ga0157372_10083757 | Ga0157372_100837573 | 273 |
| 167 | 3300013308 | Ga0157375_10000948 | Ga0157375_100009489 | 273 |
| 168 | 3300014969 | Ga0157376_10002231 | Ga0157376_100022313 | 273 |
| 169 | 3300014969 | Ga0157376_10014847 | Ga0157376_100148475 | 273 |
| 170 | 3300014969 | Ga0157376_10144815 | Ga0157376_101448152 | 273 |
| 171 | 3300014969 | Ga0157376_10239391 | Ga0157376_102393911 | 273 |
| 172 | 3300025911 | Ga0207654_10012892 | Ga0207654_100128922 | 273 |
| 173 | 3300025913 | Ga0207695_10006519 | Ga0207695_100065199 | 273 |
| 174 | 3300025914 | Ga0207671_10003152 | Ga0207671_100031523 | 273 |
| 175 | 3300025916 | Ga0207663_10169357 | Ga0207663_101693572 | 273 |
| 176 | 3300025919 | Ga0207657_10002986 | Ga0207657_100029868 | 273 |
| 177 | 3300025921 | Ga0207652_10360812 | Ga0207652_103608121 | 273 |
| 178 | 3300025923 | Ga0207681_10152188 | Ga0207681_101521882 | 273 |
| 179 | 3300025924 | Ga0207694_10001336 | Ga0207694_100013363 | 273 |
| 180 | 3300025924 | Ga0207694_10088578 | Ga0207694_100885781 | 273 |
| 181 | 3300025931 | Ga0207644_10361428 | Ga0207644_103614281 | 273 |
| 182 | 3300025934 | Ga0207686_10008818 | Ga0207686_100088182 | 273 |
| 183 | 3300025941 | Ga0207711_10267343 | Ga0207711_102673432 | 273 |
| 184 | 3300025942 | Ga0207689_10032582 | Ga0207689_100325824 | 273 |
| 185 | 3300025972 | Ga0207668_10095964 | Ga0207668_100959641 | 273 |
| 186 | 3300026041 | Ga0207639_10115528 | Ga0207639_101155282 | 273 |
| 187 | 3300026041 | Ga0207639_10177168 | Ga0207639_101771682 | 273 |
| 188 | 3300026088 | Ga0207641_10081206 | Ga0207641_100812064 | 273 |
| 189 | 3300026089 | Ga0207648_10057053 | Ga0207648_100570532 | 273 |
| 190 | 3300026095 | Ga0207676_10539310 | Ga0207676_105393101 | 273 |
| 191 | 3300026121 | Ga0207683_10011969 | Ga0207683_100119698 | 273 |
| 192 | 3300026121 | Ga0207683_10014525 | Ga0207683_100145253 | 273 |
| 193 | 3300027424 | Ga0209984_1009167 | Ga0209984_10091672 | 273 |
| 194 | 3300027665 | Ga0209983_1000775 | Ga0209983_10007754 | 273 |
| 195 | 3300027665 | Ga0209983_1033409 | Ga0209983_10334092 | 273 |
| 196 | 3300027876 | Ga0209974_10003447 | Ga0209974_100034475 | 273 |
| 197 | 3300027876 | Ga0209974_10007226 | Ga0209974_100072265 | 273 |
| 198 | 3300028379 | Ga0268266_10200750 | Ga0268266_102007502 | 273 |
| 199 | 3300028381 | Ga0268264_10125061 | Ga0268264_101250613 | 273 |
| 200 | 3300031548 | Ga0307408_100250133 | Ga0307408_1002501332 | 273 |
| 201 | 3300031731 | Ga0307405_10258335 | Ga0307405_102583352 | 273 |
| 202 | 3300031901 | Ga0307406_10197201 | Ga0307406_101972011 | 273 |
| 203 | 3300032126 | Ga0307415_100191859 | Ga0307415_1001918592 | 273 |
| 204 | 3300036401 | Ga0373937_0097605 | Ga0373937_0097605_1281_2147 | 273 |
| 205 | 3300037418 | Ga0395900_0162023 | Ga0395900_0162023_920_1753 | 273 |
| 206 | 3300037466 | Ga0395898_0154438 | Ga0395898_0154438_503_1336 | 273 |
| 207 | 3300037471 | Ga0395905_0272276 | Ga0395905_0272276_597_1427 | 273 |
| 208 | 3300041404 | Ga0439436_0056103 | Ga0439436_0056103_61_894 | 273 |
| 209 | 3300042006 | Ga0439432_001368 | Ga0439432_001368_5971_6804 | 273 |
| 210 | 3300042006 | Ga0439432_009683 | Ga0439432_009683_67_990 | 273 |
| 211 | 3300042007 | Ga0439449_0001494 | Ga0439449_0001494_7623_8456 | 273 |
| 212 | 3300042007 | Ga0439449_0003503 | Ga0439449_0003503_968_1891 | 273 |
| 213 | 3300046472 | Ga0495580_0069294 | Ga0495580_0069294_605_1471 | 273 |
| 214 | 3300046475 | Ga0495639_0038485 | Ga0495639_0038485_800_1666 | 273 |
| 215 | 3300046539 | Ga0495621_0101415 | Ga0495621_0101415_253_1086 | 273 |
| 216 | 3300046615 | Ga0495656_0023621 | Ga0495656_0023621_1534_2367 | 273 |
| 217 | 3300046664 | Ga0495659_0024386 | Ga0495659_0024386_640_1473 | 273 |
| 218 | 3300046691 | Ga0495670_0037175 | Ga0495670_0037175_981_1814 | 273 |
| 219 | 3300047318 | Ga0495636_0000456 | Ga0495636_0000456_6067_6900 | 273 |
| 220 | 3300047318 | Ga0495636_0002010 | Ga0495636_0002010_1988_2821 | 273 |
| 221 | 3300048907 | Ga0496104_0000018 | Ga0496104_0000018_120843_121709 | 273 |
| 222 | 3300048908 | Ga0496105_0000080 | Ga0496105_0000080_46087_46953 | 273 |
| 223 | 3300049705 | Ga0501225_0014387 | Ga0501225_0014387_55_888 | 273 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1ve3-assembly1.cif.gz_A-3 | crystal structure of ph0226 protein from pyrococcus horikoshii ot3 | 0.8695 | 24 | 149 |
| 7wm6-assembly2.cif.gz_D | crystal structure of sah-bound trmm from mycoplasma capricolum | 0.8497 | 44 | 151 |
| 4kdr-assembly1.cif.gz_A | crystal structure of ubig/sah complex | 0.842 | 22 | 149 |
| 4kdc-assembly1.cif.gz_A | crystal structure of ubig | 0.8336 | 16 | 149 |
| 4hh4-assembly1.cif.gz_C | structure of the ccbj methyltransferase from streptomyces caelestis | 0.8286 | 40 | 155 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2o57A02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.9167 | 34 | 145 | 3.40.50.150 |
| af_A0A2R8RIC7_223_404_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.9064 | 43 | 146 | 3.40.50.150 |
| af_Q50584_122_315_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8931 | 43 | 143 | 3.40.50.150 |
| af_K7LS70_12_147_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8894 | 39 | 100 | 3.40.50.150 |
| 3mggA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8866 | 41 | 203 | 3.40.50.150 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A382GTH4-F1-model_v4 | 16S rRNA (Cytosine(1402)-N(4))-methyltransferase | 0.9602 | 44 | 102 |
GO:0070475
GO:0071424 |
| AF-A0A5K6EIG6-F1-model_v4 | deleted | 0.9108 | 39 | 152 |
|
| AF-A0A2P8KJG3-F1-model_v4 | Class I SAM-dependent methyltransferase | 0.91 | 39 | 152 |
GO:0008757
GO:0032259 |
| AF-A0A1Q7RXR0-F1-model_v4 | Methyltransferase type 11 domain-containing protein | 0.9038 | 43 | 152 |
GO:0008757
|
| AF-A0A1F9WYA0-F1-model_v4 | Methyltransferase type 11 domain-containing protein | 0.9002 | 39 | 149 |
GO:0008757
|
Predicted Structure (AlphaFold2)
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