F335641
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 223 | 183 | 446 | 354 |
Family's Representative Sequence
| Representative Sequence | 3300025228|Ga0209672_105889|Ga0209672_1058892 |
| Length | 407 |
| Sequence | MPSGRTLWAHRARMRFVLGRPSDKKLAYWFYIQYYSVHNLPPDPPKIDKTAKSAGSANSEKAKALAAALSQIEKQFGKGSIMRYGDNEVEHDIQVVSTGSLGLDIALGVGGLPRGRVIEVYGPESSGKTTLTLQVIAEMQKIGGTCAFIDAEHALDVQYASKLGVNLVDLLISQPDTGEQALEITDALVRSGSVDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSIKKGEEVVGNETRVKVVKNKVSPPFKQVEFDIMYGAGISREGEIIDLGVQANIVEKSGSWYSYSGNRIGQGKDNAREYLKENPAIAIEIENKVRENQGVVSRAAAFTASSEEAADANSTEE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300025228 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 2 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 3 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 4 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 7 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 8 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 9 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 16 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 20 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 21 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 22 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 24 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 28 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 29 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 31 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 33 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 34 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 35 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 36 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 37 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 38 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 39 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 40 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 41 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 42 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 43 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 57 | 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 58 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 59 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 90 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 91 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 92 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 93 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 94 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 95 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 96 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 97 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 98 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 99 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 100 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 101 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 102 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 103 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 104 | 3300035088 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 | Metagenome | Rhizosphere |
| 105 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 106 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 107 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 108 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 109 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 110 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 111 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 112 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 113 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 114 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 115 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 116 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 117 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 118 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 119 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 120 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 121 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 122 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 123 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 124 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 125 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 126 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 127 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 128 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 133 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 134 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 135 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 136 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 137 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 138 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 139 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 140 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 141 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 142 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 143 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 144 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 145 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 146 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 147 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 148 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 149 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 150 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 151 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 152 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 153 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 154 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 155 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 156 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 157 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 158 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 159 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 160 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 161 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 162 | 3300053161 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere | Metagenome | Endosphere |
| 163 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 164 | 2599185292 | Achromobacter sp. NFACC18-2 | Isolate | Rhizoplane |
| 165 | 2643221569 | Achromobacter sp. Root565 | Isolate | Unclassified |
| 166 | 2643221594 | Achromobacter sp. Root170 | Isolate | Unclassified |
| 167 | 2643221621 | Achromobacter sp. Root83 | Isolate | Unclassified |
| 168 | 2739367655 | Pusillimonas sp. YR330 | Isolate | Unclassified |
| 169 | 2757320392 | Phyllobacterium leguminum ORS 1419 | Isolate | Nodule |
| 170 | 2808606395 | Achromobacter sp. SLBN-14 | Isolate | Unclassified |
| 171 | 2855730933 | Achromobacter sp. HZ28 | Isolate | Nodule |
| 172 | 2855767633 | Achromobacter sp. HZ34 | Isolate | Nodule |
| 173 | 2857537821 | Achromobacter sp. R-71975 | Isolate | Unclassified |
| 174 | 2857542790 | Achromobacter sp. R-72367 | Isolate | Unclassified |
| 175 | 2857576091 | Pigmentiphaga sp. R-72090 | Isolate | Unclassified |
| 176 | 2858950400 | Achromobacter sp. K91 | Isolate | Unclassified |
| 177 | 2881412998 | Achromobacter aloeverae AVA-1 | Isolate | Unclassified |
| 178 | 2881927736 | Candidimonas sp. SYP-B2681 | Isolate | Rhizosphere |
| 179 | 2887375801 | Parapusillimonas sp. SGNA-6 | Isolate | Rhizosphere |
| 180 | 2904430863 | Curtobacterium oceanosedimentum 1519 | Isolate | Rhizosphere |
| 181 | 2941479691 | |||
| 182 | 8002392321 | Alcaligenes faecalis Mc250 | Isolate | Rhizosphere |
| 183 | 8055225921 | Achromobacter panacis KCTC 42751 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 89.24 |
| Metatranscriptomes | 1.79 |
| Isolates | 8.97 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 6.28 |
| Nodule | 1.35 |
| Rhizoplane | 4.04 |
| Rhizosphere | 75.78 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0209672_105889 | 3300025228 | Bacteria | 2056 |
| 2 | JGI25151J46595_10001058 | 3300003187 | Bacteria | 20510 |
| 3 | Ga0055540_1004032 | 3300003792 | Bacteria | 6834 |
| 4 | Ga0070683_100056824 | 3300005329 | Bacteria | 3634 |
| 5 | Ga0070670_100023136 | 3300005331 | Bacteria | 5348 |
| 6 | Ga0068869_100088412 | 3300005334 | Bacteria | 2325 |
| 7 | Ga0070680_100151853 | 3300005336 | Bacteria | 1944 |
| 8 | Ga0070689_100061283 | 3300005340 | Bacteria | 2926 |
| 9 | Ga0070689_100082478 | 3300005340 | Bacteria | 2526 |
| 10 | Ga0070661_100076331 | 3300005344 | Bacteria | 2470 |
| 11 | Ga0070673_100089137 | 3300005364 | Bacteria | 2517 |
| 12 | Ga0070659_100064534 | 3300005366 | Bacteria | 2898 |
| 13 | Ga0070700_100137103 | 3300005441 | Bacteria | 1658 |
| 14 | Ga0070694_100101957 | 3300005444 | Bacteria | 2031 |
| 15 | Ga0070678_100081755 | 3300005456 | Bacteria | 2450 |
| 16 | Ga0068867_100237747 | 3300005459 | Bacteria | 1475 |
| 17 | Ga0070707_100065744 | 3300005468 | Bacteria | 3484 |
| 18 | Ga0070698_100012018 | 3300005471 | Bacteria | 9178 |
| 19 | Ga0070698_100014071 | 3300005471 | Bacteria | 8460 |
| 20 | Ga0070699_100004533 | 3300005518 | Bacteria | 12298 |
| 21 | Ga0070679_100249761 | 3300005530 | Bacteria | 1730 |
| 22 | Ga0070684_100020378 | 3300005535 | Bacteria | 5502 |
| 23 | Ga0068853_100045214 | 3300005539 | Bacteria | 3770 |
| 24 | Ga0070672_100061683 | 3300005543 | Bacteria | 2956 |
| 25 | Ga0070686_100035193 | 3300005544 | Bacteria | 3091 |
| 26 | Ga0070696_100057478 | 3300005546 | Bacteria | 2715 |
| 27 | Ga0070693_100022893 | 3300005547 | Bacteria | 3331 |
| 28 | Ga0070665_100101183 | 3300005548 | Bacteria | 2886 |
| 29 | Ga0070704_100005140 | 3300005549 | Bacteria | 7604 |
| 30 | Ga0070704_100254292 | 3300005549 | Bacteria | 1444 |
| 31 | Ga0068855_100030102 | 3300005563 | Bacteria | 6492 |
| 32 | Ga0070664_100035767 | 3300005564 | Bacteria | 4170 |
| 33 | Ga0068857_100139930 | 3300005577 | Bacteria | 2187 |
| 34 | Ga0070702_100058118 | 3300005615 | Bacteria | 2239 |
| 35 | Ga0068864_100218068 | 3300005618 | Bacteria | 1759 |
| 36 | Ga0068858_100242528 | 3300005842 | Bacteria | 1710 |
| 37 | Ga0081538_10001563 | 3300005981 | Bacteria | 23478 |
| 38 | Ga0081538_10022356 | 3300005981 | Bacteria | 4583 |
| 39 | Ga0075364_10000915 | 3300006051 | Bacteria | 15590 |
| 40 | Ga0075364_10004575 | 3300006051 | Bacteria | 7963 |
| 41 | Ga0075364_10021979 | 3300006051 | Bacteria | 4024 |
| 42 | Ga0068871_100097604 | 3300006358 | Bacteria | 2456 |
| 43 | Ga0075428_100021507 | 3300006844 | Bacteria | 7140 |
| 44 | Ga0075430_100117006 | 3300006846 | Bacteria | 2221 |
| 45 | Ga0075430_100168744 | 3300006846 | Bacteria | 1820 |
| 46 | Ga0075431_100258568 | 3300006847 | Bacteria | 1767 |
| 47 | Ga0075429_100000871 | 3300006880 | Bacteria | 23800 |
| 48 | Ga0068865_100140496 | 3300006881 | Bacteria | 1820 |
| 49 | Ga0099794_10000003 | 3300007265 | Bacteria | 139452 |
| 50 | Ga0105251_10029675 | 3300009011 | Bacteria | 2752 |
| 51 | Ga0105240_10058969 | 3300009093 | Bacteria | 4791 |
| 52 | Ga0105240_10070191 | 3300009093 | Bacteria | 4334 |
| 53 | Ga0111539_10034850 | 3300009094 | Bacteria | 6098 |
| 54 | Ga0114129_10015710 | 3300009147 | Bacteria | 10764 |
| 55 | Ga0105248_10097528 | 3300009177 | Bacteria | 3312 |
| 56 | Ga0105238_10070167 | 3300009551 | Bacteria | 3504 |
| 57 | Ga0157371_10014467 | 3300013102 | Bacteria | 5953 |
| 58 | Ga0157369_10211201 | 3300013105 | Bacteria | 2034 |
| 59 | Ga0163162_10438129 | 3300013306 | Bacteria | 1439 |
| 60 | Ga0157375_10194795 | 3300013308 | Bacteria | 2182 |
| 61 | Ga0163163_10136129 | 3300014325 | Bacteria | 2498 |
| 62 | Ga0157377_10022761 | 3300014745 | Bacteria | 3313 |
| 63 | Ga0157379_10236727 | 3300014968 | Bacteria | 1656 |
| 64 | Ga0197907_10838997 | 3300020069 | Bacteria | 4767 |
| 65 | Ga0206354_10516408 | 3300020081 | Bacteria | 1251 |
| 66 | Ga0206354_10790158 | 3300020081 | Bacteria | 2215 |
| 67 | Ga0224712_10090835 | 3300022467 | Bacteria | 1279 |
| 68 | Ga0209455_1000561 | 3300025272 | Bacteria | 24982 |
| 69 | Ga0209025_1000003 | 3300025294 | Bacteria | 1366495 |
| 70 | Ga0209050_1007252 | 3300025298 | Bacteria | 6280 |
| 71 | Ga0209051_1002061 | 3300025303 | Bacteria | 15247 |
| 72 | Ga0207710_10042802 | 3300025900 | Bacteria | 2013 |
| 73 | Ga0207688_10027703 | 3300025901 | Bacteria | 3116 |
| 74 | Ga0207699_10101411 | 3300025906 | Bacteria | 1827 |
| 75 | Ga0207645_10054119 | 3300025907 | Bacteria | 2563 |
| 76 | Ga0207695_10174660 | 3300025913 | Bacteria | 2072 |
| 77 | Ga0207663_10148987 | 3300025916 | Bacteria | 1639 |
| 78 | Ga0207662_10024585 | 3300025918 | Bacteria | 3466 |
| 79 | Ga0207657_10006352 | 3300025919 | Bacteria | 12276 |
| 80 | Ga0207649_10091602 | 3300025920 | Bacteria | 1991 |
| 81 | Ga0207650_10008824 | 3300025925 | Bacteria | 6890 |
| 82 | Ga0207659_10060210 | 3300025926 | Bacteria | 2732 |
| 83 | Ga0207706_10066964 | 3300025933 | Bacteria | 3160 |
| 84 | Ga0207709_10061936 | 3300025935 | Bacteria | 2339 |
| 85 | Ga0207691_10047350 | 3300025940 | Bacteria | 3946 |
| 86 | Ga0207689_10017953 | 3300025942 | Bacteria | 5973 |
| 87 | Ga0207679_10079908 | 3300025945 | Bacteria | 2495 |
| 88 | Ga0207667_10069802 | 3300025949 | Bacteria | 3657 |
| 89 | Ga0207667_10300069 | 3300025949 | Bacteria | 1641 |
| 90 | Ga0207658_10147119 | 3300025986 | Bacteria | 1915 |
| 91 | Ga0207639_10358928 | 3300026041 | Bacteria | 1303 |
| 92 | Ga0207678_10009836 | 3300026067 | Bacteria | 8403 |
| 93 | Ga0207702_10115167 | 3300026078 | Bacteria | 2397 |
| 94 | Ga0207648_10154898 | 3300026089 | Bacteria | 2023 |
| 95 | Ga0207674_10044825 | 3300026116 | Bacteria | 4554 |
| 96 | Ga0207675_100140618 | 3300026118 | Bacteria | 2293 |
| 97 | Ga0207683_10008262 | 3300026121 | Bacteria | 8903 |
| 98 | Ga0209588_1000001 | 3300027671 | Bacteria | 705877 |
| 99 | Ga0209588_1000002 | 3300027671 | Bacteria | 311181 |
| 100 | Ga0265336_10000030 | 3300028666 | Bacteria | 169335 |
| 101 | Ga0307515_10126782 | 3300028794 | Bacteria | 2844 |
| 102 | Ga0265338_10117227 | 3300028800 | Bacteria | 2131 |
| 103 | Ga0265324_10000522 | 3300029957 | Bacteria | 26385 |
| 104 | Ga0265328_10046627 | 3300031239 | Bacteria | 1593 |
| 105 | Ga0265325_10000093 | 3300031241 | Bacteria | 63498 |
| 106 | Ga0265340_10070585 | 3300031247 | Bacteria | 1656 |
| 107 | Ga0265339_10030234 | 3300031249 | Bacteria | 3068 |
| 108 | Ga0307508_10033007 | 3300031616 | Bacteria | 4674 |
| 109 | Ga0316575_10001824 | 3300031665 | Bacteria | 6991 |
| 110 | Ga0316579_10008543 | 3300031691 | Bacteria | 4274 |
| 111 | Ga0265314_10003906 | 3300031711 | Bacteria | 14162 |
| 112 | Ga0316576_10000324 | 3300031727 | Bacteria | 21358 |
| 113 | Ga0307412_10001078 | 3300031911 | Bacteria | 15610 |
| 114 | Ga0316583_10004231 | 3300032133 | Bacteria | 5112 |
| 115 | Ga0373940_0009275 | 3300035088 | Bacteria | 2284 |
| 116 | Ga0373932_0003826 | 3300035112 | Bacteria | 3597 |
| 117 | Ga0316574_0001213 | 3300035398 | Bacteria | 11974 |
| 118 | Ga0316574_0036403 | 3300035398 | Bacteria | 3013 |
| 119 | Ga0316574_0040024 | 3300035398 | Bacteria | 2885 |
| 120 | Ga0316574_0043384 | 3300035398 | Bacteria | 2779 |
| 121 | Ga0373931_0035699 | 3300035691 | Bacteria | 2586 |
| 122 | Ga0373927_0041791 | 3300035695 | Bacteria | 2973 |
| 123 | Ga0373947_0178038 | 3300035725 | Bacteria | 1383 |
| 124 | Ga0316582_0003129 | 3300036647 | Bacteria | 8017 |
| 125 | Ga0316582_0125970 | 3300036647 | Bacteria | 1717 |
| 126 | Ga0316584_0016616 | 3300036712 | Bacteria | 5278 |
| 127 | Ga0395900_0003166 | 3300037418 | Bacteria | 17840 |
| 128 | Ga0395905_0183960 | 3300037471 | Bacteria | 1962 |
| 129 | Ga0400483_213929 | 3300039062 | Bacteria | 24874 |
| 130 | Ga0436365_1703527 | 3300039437 | Bacteria | 1434 |
| 131 | Ga0436361_0286478 | 3300039447 | Bacteria | 6112 |
| 132 | Ga0451577_0116220 | 3300042876 | Bacteria | 2396 |
| 133 | Ga0466969_0008025 | 3300044656 | Bacteria | 5607 |
| 134 | Ga0453683_0000007 | 3300044673 | Bacteria | 581341 |
| 135 | Ga0453683_0021387 | 3300044673 | Bacteria | 4131 |
| 136 | Ga0453683_0023062 | 3300044673 | Bacteria | 3967 |
| 137 | Ga0453683_0212978 | 3300044673 | Bacteria | 1228 |
| 138 | Ga0466965_0007320 | 3300044683 | Bacteria | 5061 |
| 139 | Ga0466961_0134294 | 3300044693 | Bacteria | 1550 |
| 140 | Ga0453684_0032817 | 3300044712 | Bacteria | 7254 |
| 141 | Ga0453684_0245147 | 3300044712 | Bacteria | 2061 |
| 142 | Ga0466971_0004498 | 3300044719 | Bacteria | 6026 |
| 143 | Ga0466970_0016223 | 3300044765 | Bacteria | 3838 |
| 144 | Ga0466957_0005118 | 3300044842 | Bacteria | 7326 |
| 145 | Ga0451576_0000067 | 3300045051 | Bacteria | 265145 |
| 146 | Ga0451576_0001079 | 3300045051 | Bacteria | 49994 |
| 147 | Ga0451576_0001984 | 3300045051 | Bacteria | 32514 |
| 148 | Ga0451576_0036099 | 3300045051 | Bacteria | 5242 |
| 149 | Ga0466958_0007789 | 3300045836 | Bacteria | 5911 |
| 150 | Ga0495582_0166911 | 3300046473 | Bacteria | 1253 |
| 151 | Ga0495607_0000007 | 3300046501 | Bacteria | 272517 |
| 152 | Ga0495628_0003451 | 3300046516 | Bacteria | 14153 |
| 153 | Ga0495686_0002695 | 3300047472 | Bacteria | 16287 |
| 154 | Ga0496100_0083524 | 3300048903 | Bacteria | 2162 |
| 155 | Ga0496106_0224483 | 3300048909 | Bacteria | 1498 |
| 156 | Ga0496106_0335090 | 3300048909 | Bacteria | 1215 |
| 157 | Ga0496107_0052056 | 3300048910 | Bacteria | 2953 |
| 158 | Ga0496109_0188330 | 3300048912 | Bacteria | 1938 |
| 159 | Ga0496111_0095557 | 3300048914 | Bacteria | 2180 |
| 160 | Ga0496113_0084029 | 3300048916 | Bacteria | 2443 |
| 161 | Ga0496115_0037650 | 3300048918 | Bacteria | 3834 |
| 162 | Ga0496119_0008810 | 3300048922 | Bacteria | 8782 |
| 163 | Ga0496120_0008878 | 3300048923 | Bacteria | 7203 |
| 164 | Ga0496121_0000127 | 3300048924 | Bacteria | 168545 |
| 165 | Ga0496121_0050400 | 3300048924 | Bacteria | 3518 |
| 166 | Ga0496122_0000573 | 3300048925 | Bacteria | 75439 |
| 167 | Ga0496122_0027766 | 3300048925 | Bacteria | 4827 |
| 168 | Ga0496123_0003583 | 3300048926 | Bacteria | 17208 |
| 169 | Ga0496124_0000350 | 3300048927 | Bacteria | 84078 |
| 170 | Ga0496124_0038959 | 3300048927 | Bacteria | 4123 |
| 171 | Ga0496124_0110457 | 3300048927 | Bacteria | 2213 |
| 172 | Ga0496125_0000011 | 3300048928 | Bacteria | 655895 |
| 173 | Ga0496125_0084269 | 3300048928 | Bacteria | 2414 |
| 174 | Ga0496126_0025188 | 3300048929 | Bacteria | 5729 |
| 175 | Ga0501032_0002933 | 3300049569 | Bacteria | 13263 |
| 176 | Ga0501033_0022474 | 3300049570 | Bacteria | 4758 |
| 177 | Ga0501033_0097780 | 3300049570 | Bacteria | 2144 |
| 178 | Ga0501034_0017821 | 3300049571 | Bacteria | 7283 |
| 179 | Ga0501034_0035077 | 3300049571 | Bacteria | 5087 |
| 180 | Ga0501034_0083921 | 3300049571 | Bacteria | 3188 |
| 181 | Ga0501036_0001239 | 3300049572 | Bacteria | 19517 |
| 182 | Ga0501043_0005205 | 3300049579 | Bacteria | 10527 |
| 183 | Ga0501046_0056232 | 3300049580 | Bacteria | 3089 |
| 184 | Ga0501047_0001621 | 3300049581 | Bacteria | 21952 |
| 185 | Ga0501047_0008422 | 3300049581 | Bacteria | 9730 |
| 186 | Ga0501067_0164301 | 3300049583 | Bacteria | 1236 |
| 187 | Ga0501083_0065701 | 3300049744 | Bacteria | 2416 |
| 188 | Ga0501035_0000042 | 3300049822 | Bacteria | 152455 |
| 189 | Ga0501035_0008111 | 3300049822 | Bacteria | 9788 |
| 190 | Ga0501035_0011758 | 3300049822 | Bacteria | 8106 |
| 191 | Ga0501035_0040445 | 3300049822 | Bacteria | 4213 |
| 192 | Ga0501044_0002300 | 3300049823 | Bacteria | 21780 |
| 193 | Ga0501044_0008112 | 3300049823 | Bacteria | 11527 |
| 194 | Ga0501044_0008660 | 3300049823 | Bacteria | 11144 |
| 195 | Ga0501044_0011819 | 3300049823 | Bacteria | 9458 |
| 196 | nmdc:mga00v17_115875_c1 | 3300050491 | Bacteria | 1703 |
| 197 | nmdc:mga00v17_2572_c2 | 3300050491 | Bacteria | 8427 |
| 198 | nmdc:mga05p37_2494_c1 | 3300050507 | Bacteria | 21411 |
| 199 | nmdc:mga05p37_49164_c1 | 3300050507 | Bacteria | 5187 |
| 200 | nmdc:mga0rr50_128782_c1 | 3300050513 | Bacteria | 2024 |
| 201 | Ga0500641_0000574 | 3300053096 | Bacteria | 13264 |
| 202 | Ga0500634_0108343 | 3300053161 | Bacteria | 1376 |
| 203 | Ga0466962_0024087 | 3300061719 | Bacteria | 2924 |
| 204 | 2599906208 | 2599185292 | Bacteria | 6290804 |
| 205 | 2643861990 | 2643221569 | Bacteria | 6064337 |
| 206 | 2643980966 | 2643221594 | Bacteria | 5811388 |
| 207 | 2644122420 | 2643221621 | Bacteria | 6212786 |
| 208 | 2739613072 | 2739367655 | Bacteria | 4051151 |
| 209 | 2757569482 | 2757320392 | Bacteria | 3737298 |
| 210 | 2809031708 | 2808606395 | Bacteria | 6020352 |
| 211 | 2855734267 | 2855730933 | Bacteria | 7047938 |
| 212 | 2855769857 | 2855767633 | Bacteria | 7049357 |
| 213 | 2857540750 | 2857537821 | Bacteria | 5248181 |
| 214 | 2857545473 | 2857542790 | Bacteria | 5326616 |
| 215 | 2857579082 | 2857576091 | Bacteria | 5465855 |
| 216 | 2858956541 | 2858950400 | Bacteria | 6783797 |
| 217 | 2881414114 | 2881412998 | Bacteria | 6492157 |
| 218 | 2881930963 | 2881927736 | Bacteria | 3993927 |
| 219 | 2887378645 | 2887375801 | Bacteria | 5334027 |
| 220 | 2904433374 | 2904430863 | Bacteria | 3486923 |
| 221 | 2941482277 | |||
| 222 | 8002394604 | 8002392321 | Bacteria | 4159911 |
| 223 | 8055228812 | 8055225921 | Bacteria | 3341787 |
| 224 | Ga0209672_105889 | |||
| 225 | JGI25151J46595_10001058 | |||
| 226 | Ga0055540_1004032 | |||
| 227 | Ga0070683_100056824 | |||
| 228 | Ga0070670_100023136 | |||
| 229 | Ga0068869_100088412 | |||
| 230 | Ga0070680_100151853 | |||
| 231 | Ga0070689_100061283 | |||
| 232 | Ga0070689_100082478 | |||
| 233 | Ga0070661_100076331 | |||
| 234 | Ga0070673_100089137 | |||
| 235 | Ga0070659_100064534 | |||
| 236 | Ga0070700_100137103 | |||
| 237 | Ga0070694_100101957 | |||
| 238 | Ga0070678_100081755 | |||
| 239 | Ga0068867_100237747 | |||
| 240 | Ga0070707_100065744 | |||
| 241 | Ga0070698_100012018 | |||
| 242 | Ga0070698_100014071 | |||
| 243 | Ga0070699_100004533 | |||
| 244 | Ga0070679_100249761 | |||
| 245 | Ga0070684_100020378 | |||
| 246 | Ga0068853_100045214 | |||
| 247 | Ga0070672_100061683 | |||
| 248 | Ga0070686_100035193 | |||
| 249 | Ga0070696_100057478 | |||
| 250 | Ga0070693_100022893 | |||
| 251 | Ga0070665_100101183 | |||
| 252 | Ga0070704_100005140 | |||
| 253 | Ga0070704_100254292 | |||
| 254 | Ga0068855_100030102 | |||
| 255 | Ga0070664_100035767 | |||
| 256 | Ga0068857_100139930 | |||
| 257 | Ga0070702_100058118 | |||
| 258 | Ga0068864_100218068 | |||
| 259 | Ga0068858_100242528 | |||
| 260 | Ga0081538_10001563 | |||
| 261 | Ga0081538_10022356 | |||
| 262 | Ga0075364_10000915 | |||
| 263 | Ga0075364_10004575 | |||
| 264 | Ga0075364_10021979 | |||
| 265 | Ga0068871_100097604 | |||
| 266 | Ga0075428_100021507 | |||
| 267 | Ga0075430_100117006 | |||
| 268 | Ga0075430_100168744 | |||
| 269 | Ga0075431_100258568 | |||
| 270 | Ga0075429_100000871 | |||
| 271 | Ga0068865_100140496 | |||
| 272 | Ga0099794_10000003 | |||
| 273 | Ga0105251_10029675 | |||
| 274 | Ga0105240_10058969 | |||
| 275 | Ga0105240_10070191 | |||
| 276 | Ga0111539_10034850 | |||
| 277 | Ga0114129_10015710 | |||
| 278 | Ga0105248_10097528 | |||
| 279 | Ga0105238_10070167 | |||
| 280 | Ga0157371_10014467 | |||
| 281 | Ga0157369_10211201 | |||
| 282 | Ga0163162_10438129 | |||
| 283 | Ga0157375_10194795 | |||
| 284 | Ga0163163_10136129 | |||
| 285 | Ga0157377_10022761 | |||
| 286 | Ga0157379_10236727 | |||
| 287 | Ga0197907_10838997 | |||
| 288 | Ga0206354_10516408 | |||
| 289 | Ga0206354_10790158 | |||
| 290 | Ga0224712_10090835 | |||
| 291 | Ga0209455_1000561 | |||
| 292 | Ga0209025_1000003 | |||
| 293 | Ga0209050_1007252 | |||
| 294 | Ga0209051_1002061 | |||
| 295 | Ga0207710_10042802 | |||
| 296 | Ga0207688_10027703 | |||
| 297 | Ga0207699_10101411 | |||
| 298 | Ga0207645_10054119 | |||
| 299 | Ga0207695_10174660 | |||
| 300 | Ga0207663_10148987 | |||
| 301 | Ga0207662_10024585 | |||
| 302 | Ga0207657_10006352 | |||
| 303 | Ga0207649_10091602 | |||
| 304 | Ga0207650_10008824 | |||
| 305 | Ga0207659_10060210 | |||
| 306 | Ga0207706_10066964 | |||
| 307 | Ga0207709_10061936 | |||
| 308 | Ga0207691_10047350 | |||
| 309 | Ga0207689_10017953 | |||
| 310 | Ga0207679_10079908 | |||
| 311 | Ga0207667_10069802 | |||
| 312 | Ga0207667_10300069 | |||
| 313 | Ga0207658_10147119 | |||
| 314 | Ga0207639_10358928 | |||
| 315 | Ga0207678_10009836 | |||
| 316 | Ga0207702_10115167 | |||
| 317 | Ga0207648_10154898 | |||
| 318 | Ga0207674_10044825 | |||
| 319 | Ga0207675_100140618 | |||
| 320 | Ga0207683_10008262 | |||
| 321 | Ga0209588_1000001 | |||
| 322 | Ga0209588_1000002 | |||
| 323 | Ga0265336_10000030 | |||
| 324 | Ga0307515_10126782 | |||
| 325 | Ga0265338_10117227 | |||
| 326 | Ga0265324_10000522 | |||
| 327 | Ga0265328_10046627 | |||
| 328 | Ga0265325_10000093 | |||
| 329 | Ga0265340_10070585 | |||
| 330 | Ga0265339_10030234 | |||
| 331 | Ga0307508_10033007 | |||
| 332 | Ga0316575_10001824 | |||
| 333 | Ga0316579_10008543 | |||
| 334 | Ga0265314_10003906 | |||
| 335 | Ga0316576_10000324 | |||
| 336 | Ga0307412_10001078 | |||
| 337 | Ga0316583_10004231 | |||
| 338 | Ga0373940_0009275 | |||
| 339 | Ga0373932_0003826 | |||
| 340 | Ga0316574_0001213 | |||
| 341 | Ga0316574_0036403 | |||
| 342 | Ga0316574_0040024 | |||
| 343 | Ga0316574_0043384 | |||
| 344 | Ga0373931_0035699 | |||
| 345 | Ga0373927_0041791 | |||
| 346 | Ga0373947_0178038 | |||
| 347 | Ga0316582_0003129 | |||
| 348 | Ga0316582_0125970 | |||
| 349 | Ga0316584_0016616 | |||
| 350 | Ga0395900_0003166 | |||
| 351 | Ga0395905_0183960 | |||
| 352 | Ga0400483_213929 | |||
| 353 | Ga0436365_1703527 | |||
| 354 | Ga0436361_0286478 | |||
| 355 | Ga0451577_0116220 | |||
| 356 | Ga0466969_0008025 | |||
| 357 | Ga0453683_0000007 | |||
| 358 | Ga0453683_0021387 | |||
| 359 | Ga0453683_0023062 | |||
| 360 | Ga0453683_0212978 | |||
| 361 | Ga0466965_0007320 | |||
| 362 | Ga0466961_0134294 | |||
| 363 | Ga0453684_0032817 | |||
| 364 | Ga0453684_0245147 | |||
| 365 | Ga0466971_0004498 | |||
| 366 | Ga0466970_0016223 | |||
| 367 | Ga0466957_0005118 | |||
| 368 | Ga0451576_0000067 | |||
| 369 | Ga0451576_0001079 | |||
| 370 | Ga0451576_0001984 | |||
| 371 | Ga0451576_0036099 | |||
| 372 | Ga0466958_0007789 | |||
| 373 | Ga0495582_0166911 | |||
| 374 | Ga0495607_0000007 | |||
| 375 | Ga0495628_0003451 | |||
| 376 | Ga0495686_0002695 | |||
| 377 | Ga0496100_0083524 | |||
| 378 | Ga0496106_0224483 | |||
| 379 | Ga0496106_0335090 | |||
| 380 | Ga0496107_0052056 | |||
| 381 | Ga0496109_0188330 | |||
| 382 | Ga0496111_0095557 | |||
| 383 | Ga0496113_0084029 | |||
| 384 | Ga0496115_0037650 | |||
| 385 | Ga0496119_0008810 | |||
| 386 | Ga0496120_0008878 | |||
| 387 | Ga0496121_0000127 | |||
| 388 | Ga0496121_0050400 | |||
| 389 | Ga0496122_0000573 | |||
| 390 | Ga0496122_0027766 | |||
| 391 | Ga0496123_0003583 | |||
| 392 | Ga0496124_0000350 | |||
| 393 | Ga0496124_0038959 | |||
| 394 | Ga0496124_0110457 | |||
| 395 | Ga0496125_0000011 | |||
| 396 | Ga0496125_0084269 | |||
| 397 | Ga0496126_0025188 | |||
| 398 | Ga0501032_0002933 | |||
| 399 | Ga0501033_0022474 | |||
| 400 | Ga0501033_0097780 | |||
| 401 | Ga0501034_0017821 | |||
| 402 | Ga0501034_0035077 | |||
| 403 | Ga0501034_0083921 | |||
| 404 | Ga0501036_0001239 | |||
| 405 | Ga0501043_0005205 | |||
| 406 | Ga0501046_0056232 | |||
| 407 | Ga0501047_0001621 | |||
| 408 | Ga0501047_0008422 | |||
| 409 | Ga0501067_0164301 | |||
| 410 | Ga0501083_0065701 | |||
| 411 | Ga0501035_0000042 | |||
| 412 | Ga0501035_0008111 | |||
| 413 | Ga0501035_0011758 | |||
| 414 | Ga0501035_0040445 | |||
| 415 | Ga0501044_0002300 | |||
| 416 | Ga0501044_0008112 | |||
| 417 | Ga0501044_0008660 | |||
| 418 | Ga0501044_0011819 | |||
| 419 | nmdc:mga00v17_115875_c1 | |||
| 420 | nmdc:mga00v17_2572_c2 | |||
| 421 | nmdc:mga05p37_2494_c1 | |||
| 422 | nmdc:mga05p37_49164_c1 | |||
| 423 | nmdc:mga0rr50_128782_c1 | |||
| 424 | Ga0500641_0000574 | |||
| 425 | Ga0500634_0108343 | |||
| 426 | Ga0466962_0024087 | |||
| 427 | 2599906208 | |||
| 428 | 2643861990 | |||
| 429 | 2643980966 | |||
| 430 | 2644122420 | |||
| 431 | 2739613072 | |||
| 432 | 2757569482 | |||
| 433 | 2809031708 | |||
| 434 | 2855734267 | |||
| 435 | 2855769857 | |||
| 436 | 2857540750 | |||
| 437 | 2857545473 | |||
| 438 | 2857579082 | |||
| 439 | 2858956541 | |||
| 440 | 2881414114 | |||
| 441 | 2881930963 | |||
| 442 | 2887378645 | |||
| 443 | 2904433374 | |||
| 444 | 2941482277 | |||
| 445 | 8002394604 | |||
| 446 | 8055228812 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3cmw-assembly1.cif.gz_A | mechanism of homologous recombination from the reca-ssdna/dsdna structures | 0.891 | 13 | 333 |
| 3cmw-assembly2.cif.gz_C | mechanism of homologous recombination from the reca-ssdna/dsdna structures | 0.889 | 13 | 333 |
| 7jy9-assembly1.cif.gz_I | structure of a 9 base pair reca-d loop complex | 0.8797 | 42 | 343 |
| 7jy9-assembly1.cif.gz_I | structure of a 9 base pair reca-d loop complex | 0.8769 | 42 | 343 |
| 3cmt-assembly2.cif.gz_D | mechanism of homologous recombination from the reca-ssdna/dsdna structures | 0.8745 | 13 | 333 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2zrcA02 | Alpha Beta;2-Layer Sandwich;Rec A Protein; domain 2;RecA protein, C-terminal domain | 0.9839 | 279 | 333 | 3.30.250.10 |
| af_C0HJ69_348_406_3.30.250.10 | Alpha Beta;2-Layer Sandwich;Rec A Protein; domain 2;RecA protein, C-terminal domain | 0.9833 | 279 | 333 | 3.30.250.10 |
| af_I1MI58_328_403_3.30.250.10 | Alpha Beta;2-Layer Sandwich;Rec A Protein; domain 2;RecA protein, C-terminal domain | 0.9831 | 279 | 333 | 3.30.250.10 |
| 1ubgA02 | Alpha Beta;2-Layer Sandwich;Rec A Protein; domain 2;RecA protein, C-terminal domain | 0.9717 | 279 | 333 | 3.30.250.10 |
| 2zr7A02 | Alpha Beta;2-Layer Sandwich;Rec A Protein; domain 2;RecA protein, C-terminal domain | 0.9687 | 279 | 333 | 3.30.250.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A9LNM3-F1-model_v4 | Protein RecA | 0.9962 | 228 | 297 |
GO:0003697
GO:0005524 GO:0005829 GO:0006281 GO:0006310 GO:0008094 |
| AF-A0A2M8CL33-F1-model_v4 | Protein RecA | 0.9937 | 226 | 336 |
GO:0003697
GO:0005524 GO:0005829 GO:0006281 GO:0006310 GO:0008094 |
| AF-A0A3C0B5J9-F1-model_v4 | DNA recombination/repair protein RecA | 0.9897 | 248 | 336 |
GO:0003697
GO:0005524 GO:0005829 GO:0006281 GO:0006310 GO:0008094 |
| AF-A0A259DHC6-F1-model_v4 | Protein RecA | 0.9804 | 232 | 339 |
GO:0003697
GO:0005524 GO:0005829 GO:0006281 GO:0006310 GO:0008094 |
| AF-B8QAA3-F1-model_v4 | Protein RecA | 0.9787 | 45 | 165 |
GO:0003697
GO:0005524 GO:0006281 GO:0006310 GO:0140664 |