F335668

General Info

Members Datasets Scaffolds Average Seq Length
223 38 221 229

Family's Representative Sequence

Representative Sequence 3300025910|Ga0207684_10137551|Ga0207684_101375514
Length 235
Sequence MATRSKRYRAAAGAIDRNRRYPLDEAIRTLLASGGPTKFDETVELAVRLGVDPRQADQNVRGTVVLPHGTGKAVRVLVFAKGEKAKEATEAGADHVGAEELAKKIQDEQWLEFDTAIATPDMMGAVGRLGKILGPRGLMPNPKVGTVTFDVGKAIREVKAGKVEFRVEKAGIVHVPIGKRSFGAERLLENAQALLGSLLRAKPAAAKGNYVQSVAVATTMSPGVRIDPATVRTAA

Samples

Sample ID Description Type Environment
1 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere
2 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified
3 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
4 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
5 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
6 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
7 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
8 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
9 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
10 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
11 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
12 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
13 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
14 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
15 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
16 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
17 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
18 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
19 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
20 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
21 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
22 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
23 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
24 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
25 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
26 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
27 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
28 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
29 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
30 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
31 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
32 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
33 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
34 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
35 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
36 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
37 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
38 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 68.61
Metatranscriptomes 30.49
Isolates 0.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 82.96
Stem 0
Stem Tuber 0
Unclassified 17.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070699_100372434 3300005518 Bacteria 1288
2 Ga0068859_100571783 3300005617 Bacteria 1224
3 Ga0097620_100571747 3300006931 Bacteria 1224
4 Ga0207684_10137551 3300025910 Bacteria 2098
5 Ga0207646_10115472 3300025922 Bacteria 2411
6 Ga0265318_10011693 3300028577 Bacteria 3766
7 Ga0316575_10000368 3300031665 Bacteria 12825
8 Ga0316575_10011870 3300031665 Bacteria 3231
9 Ga0316575_10014299 3300031665 Bacteria 2977
10 Ga0316575_10020410 3300031665 Bacteria 2542
11 Ga0316575_10034566 3300031665 Bacteria 1985
12 Ga0316575_10064218 3300031665 Bacteria 1470
13 Ga0316575_10092847 3300031665 Unclassified 1223
14 Ga0316575_10125986 3300031665 Bacteria 1049
15 Ga0316575_10141869 3300031665 Bacteria 989
16 Ga0316579_10002337 3300031691 Bacteria 7164
17 Ga0316579_10002513 3300031691 Bacteria 6937
18 Ga0316579_10010160 3300031691 Bacteria 3972
19 Ga0316579_10018503 3300031691 Bacteria 3067
20 Ga0316579_10031447 3300031691 Bacteria 2430
21 Ga0316579_10151585 3300031691 Bacteria 1119
22 Ga0316576_10003381 3300031727 Bacteria 9328
23 Ga0316576_10009654 3300031727 Bacteria 6241
24 Ga0316576_10037223 3300031727 Bacteria 3482
25 Ga0316576_10048913 3300031727 Bacteria 3069
26 Ga0316576_10087676 3300031727 Bacteria 2316
27 Ga0316576_10092733 3300031727 Bacteria 2251
28 Ga0316576_10099427 3300031727 Bacteria 2173
29 Ga0316576_10116397 3300031727 Bacteria 2006
30 Ga0316576_10178242 3300031727 Bacteria 1603
31 Ga0316576_10289948 3300031727 Bacteria 1224
32 Ga0316576_10319548 3300031727 Bacteria 1158
33 Ga0316578_10000273 3300031728 Bacteria 15540
34 Ga0316578_10000396 3300031728 Bacteria 14085
35 Ga0316578_10004436 3300031728 Bacteria 6630
36 Ga0316578_10013967 3300031728 Bacteria 4272
37 Ga0316578_10018657 3300031728 Bacteria 3806
38 Ga0316578_10029891 3300031728 Bacteria 3095
39 Ga0316578_10251361 3300031728 Bacteria 1060
40 Ga0316577_10000808 3300031733 Bacteria 13589
41 Ga0316577_10005734 3300031733 Bacteria 6522
42 Ga0316577_10009073 3300031733 Bacteria 5342
43 Ga0316577_10058177 3300031733 Bacteria 2158
44 Ga0316577_10124345 3300031733 Bacteria 1450
45 Ga0316577_10240980 3300031733 Bacteria 1023
46 Ga0316577_10361669 3300031733 Bacteria 824
47 Ga0316583_10000342 3300032133 Bacteria 13290
48 Ga0316583_10005081 3300032133 Bacteria 4710
49 Ga0316583_10008128 3300032133 Bacteria 3781
50 Ga0316583_10011102 3300032133 Bacteria 3243
51 Ga0316583_10023441 3300032133 Bacteria 2206
52 Ga0316583_10040150 3300032133 Bacteria 1657
53 Ga0316583_10048598 3300032133 Bacteria 1493
54 Ga0316583_10051425 3300032133 Bacteria 1450
55 Ga0316585_10001120 3300032137 Bacteria 6978
56 Ga0316585_10003201 3300032137 Bacteria 4472
57 Ga0316585_10006905 3300032137 Bacteria 3258
58 Ga0316585_10008312 3300032137 Bacteria 3009
59 Ga0316585_10040334 3300032137 Bacteria 1486
60 Ga0316580_10005419 3300032139 Bacteria 3722
61 Ga0316580_10005944 3300032139 Bacteria 3581
62 Ga0316580_10018977 3300032139 Bacteria 2116
63 Ga0316580_10043520 3300032139 Bacteria 1385
64 Ga0316593_10000031 3300032168 Bacteria 14752
65 Ga0316593_10000158 3300032168 Bacteria 9794
66 Ga0316593_10000278 3300032168 Bacteria 8597
67 Ga0316593_10000553 3300032168 Bacteria 7002
68 Ga0316593_10000848 3300032168 Bacteria 6188
69 Ga0316593_10001195 3300032168 Bacteria 5565
70 Ga0316593_10002697 3300032168 Bacteria 4270
71 Ga0316593_10006739 3300032168 Bacteria 3120
72 Ga0316593_10010274 3300032168 Bacteria 2678
73 Ga0316593_10010596 3300032168 Bacteria 2649
74 Ga0316593_10010852 3300032168 Bacteria 2629
75 Ga0316593_10011946 3300032168 Bacteria 2538
76 Ga0316593_10014889 3300032168 Bacteria 2330
77 Ga0316593_10016426 3300032168 Bacteria 2244
78 Ga0316593_10018705 3300032168 Bacteria 2133
79 Ga0316593_10022864 3300032168 Bacteria 1968
80 Ga0316593_10023812 3300032168 Bacteria 1936
81 Ga0316593_10026649 3300032168 Bacteria 1849
82 Ga0316593_10052093 3300032168 Bacteria 1385
83 Ga0316593_10055552 3300032168 Bacteria 1346
84 Ga0316593_10102103 3300032168 Bacteria 1018
85 Ga0316593_10116682 3300032168 Bacteria 956
86 Ga0316593_10121961 3300032168 Bacteria 937
87 Ga0316592_1000462 3300033524 Bacteria 5603
88 Ga0316592_1000536 3300033524 Bacteria 5367
89 Ga0316592_1002993 3300033524 Unclassified 2987
90 Ga0316592_1010913 3300033524 Bacteria 1838
91 Ga0316592_1014427 3300033524 Bacteria 1639
92 Ga0316592_1020716 3300033524 Bacteria 1398
93 Ga0316592_1021045 3300033524 Bacteria 1387
94 Ga0316592_1029659 3300033524 Unclassified 1187
95 Ga0316592_1040699 3300033524 Eukaryota 1028
96 Ga0316588_1002017 3300033528 Bacteria 3471
97 Ga0316588_1005805 3300033528 Bacteria 2431
98 Ga0316588_1009696 3300033528 Bacteria 2013
99 Ga0316588_1017494 3300033528 Bacteria 1598
100 Ga0316588_1026560 3300033528 Bacteria 1341
101 Ga0316588_1027172 3300033528 Bacteria 1328
102 Ga0316588_1082786 3300033528 Bacteria 796
103 Ga0316587_1019830 3300033529 Bacteria 1139
104 Ga0316587_1033633 3300033529 Bacteria 912
105 Ga0316596_1000036 3300033541 Bacteria 13868
106 Ga0316596_1000058 3300033541 Bacteria 12401
107 Ga0316596_1000988 3300033541 Bacteria 5465
108 Ga0316596_1001007 3300033541 Bacteria 5422
109 Ga0316596_1001016 3300033541 Bacteria 5403
110 Ga0316596_1001482 3300033541 Bacteria 4755
111 Ga0316596_1001814 3300033541 Bacteria 4440
112 Ga0316596_1002322 3300033541 Bacteria 4044
113 Ga0316596_1002914 3300033541 Bacteria 3707
114 Ga0316596_1003948 3300033541 Bacteria 3287
115 Ga0316596_1004900 3300033541 Bacteria 3027
116 Ga0316596_1004928 3300033541 Bacteria 3022
117 Ga0316596_1005115 3300033541 Bacteria 2982
118 Ga0316596_1007874 3300033541 Bacteria 2526
119 Ga0316596_1009369 3300033541 Bacteria 2349
120 Ga0316596_1009511 3300033541 Bacteria 2333
121 Ga0316596_1010054 3300033541 Bacteria 2282
122 Ga0316596_1012785 3300033541 Bacteria 2068
123 Ga0316596_1014376 3300033541 Bacteria 1962
124 Ga0316596_1014968 3300033541 Bacteria 1929
125 Ga0316596_1018074 3300033541 Bacteria 1779
126 Ga0316596_1018195 3300033541 Bacteria 1774
127 Ga0316596_1020202 3300033541 Bacteria 1693
128 Ga0316596_1022145 3300033541 Bacteria 1623
129 Ga0316596_1046790 3300033541 Bacteria 1143
130 Ga0316596_1048409 3300033541 Bacteria 1123
131 Ga0316596_1051424 3300033541 Bacteria 1091
132 Ga0316574_0004768 3300035398 Bacteria 7163
133 Ga0316574_0010198 3300035398 Bacteria 5296
134 Ga0316574_0017765 3300035398 Bacteria 4169
135 Ga0316574_0020915 3300035398 Bacteria 3878
136 Ga0316574_0024757 3300035398 Bacteria 3596
137 Ga0316574_0043730 3300035398 Bacteria 2768
138 Ga0316574_0083416 3300035398 Bacteria 2031
139 Ga0316574_0158411 3300035398 Bacteria 1458
140 Ga0316574_0202251 3300035398 Bacteria 1276
141 Ga0316582_0001534 3300036647 Bacteria 10224
142 Ga0316582_0009633 3300036647 Bacteria 5250
143 Ga0316582_0010203 3300036647 Bacteria 5134
144 Ga0316582_0020763 3300036647 Bacteria 3868
145 Ga0316582_0030582 3300036647 Bacteria 3281
146 Ga0316582_0032769 3300036647 Bacteria 3186
147 Ga0316582_0044146 3300036647 Bacteria 2800
148 Ga0316582_0061796 3300036647 Bacteria 2403
149 Ga0316582_0171157 3300036647 Bacteria 1474
150 Ga0316582_0188363 3300036647 Bacteria 1405
151 Ga0316582_0224965 3300036647 Unclassified 1283
152 Ga0316582_0279725 3300036647 Bacteria 1145
153 Ga0316582_0329218 3300036647 Bacteria 1050
154 Ga0316582_0400524 3300036647 Unclassified 945
155 Ga0316584_0007294 3300036712 Bacteria 7548
156 Ga0316584_0009118 3300036712 Bacteria 6870
157 Ga0316584_0017588 3300036712 Bacteria 5145
158 Ga0316584_0023364 3300036712 Bacteria 4517
159 Ga0316584_0025940 3300036712 Bacteria 4302
160 Ga0316584_0035352 3300036712 Bacteria 3706
161 Ga0316584_0041422 3300036712 Bacteria 3432
162 Ga0316584_0044037 3300036712 Bacteria 3328
163 Ga0316584_0051851 3300036712 Bacteria 3068
164 Ga0316584_0114634 3300036712 Bacteria 2016
165 Ga0316584_0168633 3300036712 Bacteria 1625
166 Ga0316584_0189797 3300036712 Bacteria 1519
167 Ga0316584_0278016 3300036712 Bacteria 1217
168 Ga0316584_0369754 3300036712 Unclassified 1026
169 Ga0316581_0011547 3300037588 Bacteria 2472
170 Ga0316581_0042275 3300037588 Bacteria 1391
171 Ga0316581_0128752 3300037588 Bacteria 780
172 Ga0400484_03429 3300038725 Bacteria 9202
173 Ga0400484_18778 3300038725 Bacteria 13718
174 Ga0400490_07105 3300038726 Bacteria 3043
175 Ga0400490_07384 3300038726 Bacteria 1331
176 Ga0400490_18584 3300038726 Bacteria 1761
177 Ga0400490_18978 3300038726 Bacteria 41932
178 Ga0400490_40199 3300038726 Bacteria 2642
179 Ga0400491_02605 3300038727 Bacteria 5144
180 Ga0400491_23551 3300038727 Bacteria 1292
181 Ga0400485_05635 3300038735 Bacteria 4210
182 Ga0400485_10369 3300038735 Bacteria 14578
183 Ga0400485_12186 3300038735 Bacteria 15754
184 Ga0400485_14867 3300038735 Bacteria 7745
185 Ga0400488_07617 3300038741 Bacteria 1900
186 Ga0400488_37057 3300038741 Bacteria 2664
187 Ga0400488_59906 3300038741 Bacteria 7640
188 Ga0400486_07167 3300038742 Bacteria 15754
189 Ga0400486_19544 3300038742 Bacteria 14376
190 Ga0400486_22210 3300038742 Bacteria 14238
191 Ga0400486_30281 3300038742 Bacteria 14022
192 Ga0400483_067094 3300039062 Bacteria 2177
193 Ga0400483_103978 3300039062 Bacteria 1909
194 Ga0400483_120099 3300039062 Bacteria 48943
195 Ga0400483_143180 3300039062 Bacteria 4046
196 Ga0400483_159306 3300039062 Bacteria 1245
197 Ga0400483_182886 3300039062 Bacteria 2186
198 Ga0400483_216594 3300039062 Bacteria 3541
199 Ga0400483_228169 3300039062 Bacteria 2751
200 Ga0400483_257333 3300039062 Bacteria 11342
201 Ga0400489_53490 3300039093 Bacteria 12707
202 Ga0400489_59643 3300039093 Bacteria 25982
203 Ga0400489_74550 3300039093 Bacteria 6193
204 Ga0400489_87136 3300039093 Bacteria 2558
205 Ga0400487_07882 3300039110 Bacteria 2231
206 Ga0400487_22368 3300039110 Bacteria 2295
207 Ga0400487_32098 3300039110 Bacteria 9097
208 Ga0400487_41192 3300039110 Bacteria 13896
209 Ga0451577_0029947 3300042876 Bacteria 4917
210 Ga0451577_0053967 3300042876 Bacteria 3588
211 Ga0451577_0381668 3300042876 Bacteria 1279
212 Ga0453683_0091565 3300044673 Bacteria 1906
213 Ga0453684_0012653 3300044712 Bacteria 13869
214 Ga0453684_0035202 3300044712 Bacteria 6926
215 Ga0453684_0035213 3300044712 Bacteria 6925
216 Ga0453684_0040543 3300044712 Bacteria 6320
217 Ga0453684_0147913 3300044712 Bacteria 2795
218 Ga0453684_0392328 3300044712 Bacteria 1556
219 Ga0453684_0449139 3300044712 Bacteria 1435
220 Ga0451576_0001727 3300045051 Bacteria 35974
221 Ga0451576_0548203 3300045051 Bacteria 1215

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044712 Ga0453684_0147913 Ga0453684_0147913_1598_2308 204
2 3300031727 Ga0316576_10099427 Ga0316576_100994272 210
3 3300031728 Ga0316578_10029891 Ga0316578_100298916 210
4 3300033541 Ga0316596_1000036 Ga0316596_10000369 210
5 3300036712 Ga0316584_0189797 Ga0316584_0189797_21_725 210
6 3300036647 Ga0316582_0188363 Ga0316582_0188363_124_828 212
7 3300044673 Ga0453683_0091565 Ga0453683_0091565_76_777 214
8 3300031665 Ga0316575_10141869 Ga0316575_101418692 220
9 3300035398 Ga0316574_0024757 Ga0316574_0024757_1986_2690 220
10 3300031665 Ga0316575_10020410 Ga0316575_100204104 221
11 3300031665 Ga0316575_10034566 Ga0316575_100345663 221
12 3300031691 Ga0316579_10002513 Ga0316579_100025134 221
13 3300031727 Ga0316576_10003381 Ga0316576_100033815 221
14 3300031728 Ga0316578_10000396 Ga0316578_100003966 221
15 3300031733 Ga0316577_10005734 Ga0316577_100057344 221
16 3300032133 Ga0316583_10008128 Ga0316583_100081283 221
17 3300032137 Ga0316585_10003201 Ga0316585_100032014 221
18 3300032139 Ga0316580_10005419 Ga0316580_100054196 221
19 3300033529 Ga0316587_1019830 Ga0316587_10198302 221
20 3300033541 Ga0316596_1051424 Ga0316596_10514242 221
21 3300035398 Ga0316574_0017765 Ga0316574_0017765_1559_2263 221
22 3300035398 Ga0316574_0158411 Ga0316574_0158411_205_909 221
23 3300036647 Ga0316582_0001534 Ga0316582_0001534_2020_2724 221
24 3300036647 Ga0316582_0044146 Ga0316582_0044146_1578_2282 221
25 3300036647 Ga0316582_0329218 Ga0316582_0329218_198_902 221
26 3300036712 Ga0316584_0009118 Ga0316584_0009118_4147_4851 221
27 3300037588 Ga0316581_0011547 Ga0316581_0011547_1415_2119 221
28 3300031665 Ga0316575_10000368 Ga0316575_100003686 222
29 3300031733 Ga0316577_10058177 Ga0316577_100581772 222
30 3300032168 Ga0316593_10116682 Ga0316593_101166821 222
31 3300033541 Ga0316596_1001007 Ga0316596_10010077 222
32 3300033541 Ga0316596_1009369 Ga0316596_10093691 222
33 3300033541 Ga0316596_1048409 Ga0316596_10484092 222
34 3300035398 Ga0316574_0020915 Ga0316574_0020915_2079_2783 222
35 3300037588 Ga0316581_0042275 Ga0316581_0042275_642_1346 222
36 3300031665 Ga0316575_10014299 Ga0316575_100142992 223
37 3300031665 Ga0316575_10092847 Ga0316575_100928472 223
38 3300031691 Ga0316579_10018503 Ga0316579_100185033 223
39 3300031691 Ga0316579_10031447 Ga0316579_100314472 223
40 3300031727 Ga0316576_10009654 Ga0316576_100096546 223
41 3300031727 Ga0316576_10037223 Ga0316576_100372233 223
42 3300031727 Ga0316576_10087676 Ga0316576_100876762 223
43 3300031727 Ga0316576_10178242 Ga0316576_101782422 223
44 3300031727 Ga0316576_10289948 Ga0316576_102899482 223
45 3300031727 Ga0316576_10319548 Ga0316576_103195481 223
46 3300031728 Ga0316578_10004436 Ga0316578_100044364 223
47 3300031728 Ga0316578_10013967 Ga0316578_100139676 223
48 3300031728 Ga0316578_10018657 Ga0316578_100186576 223
49 3300031728 Ga0316578_10251361 Ga0316578_102513611 223
50 3300031733 Ga0316577_10000808 Ga0316577_100008085 223
51 3300032133 Ga0316583_10000342 Ga0316583_100003428 223
52 3300032133 Ga0316583_10011102 Ga0316583_100111026 223
53 3300032133 Ga0316583_10040150 Ga0316583_100401502 223
54 3300032133 Ga0316583_10048598 Ga0316583_100485981 223
55 3300032137 Ga0316585_10001120 Ga0316585_100011206 223
56 3300032137 Ga0316585_10006905 Ga0316585_100069052 223
57 3300032137 Ga0316585_10008312 Ga0316585_100083126 223
58 3300032137 Ga0316585_10040334 Ga0316585_100403341 223
59 3300032139 Ga0316580_10005944 Ga0316580_100059444 223
60 3300032139 Ga0316580_10018977 Ga0316580_100189773 223
61 3300032139 Ga0316580_10043520 Ga0316580_100435202 223
62 3300032168 Ga0316593_10000158 Ga0316593_100001587 223
63 3300032168 Ga0316593_10011946 Ga0316593_100119462 223
64 3300032168 Ga0316593_10016426 Ga0316593_100164262 223
65 3300032168 Ga0316593_10026649 Ga0316593_100266492 223
66 3300033524 Ga0316592_1002993 Ga0316592_10029933 223
67 3300033524 Ga0316592_1010913 Ga0316592_10109132 223
68 3300033524 Ga0316592_1020716 Ga0316592_10207161 223
69 3300033524 Ga0316592_1029659 Ga0316592_10296592 223
70 3300033528 Ga0316588_1002017 Ga0316588_10020174 223
71 3300033528 Ga0316588_1009696 Ga0316588_10096962 223
72 3300033528 Ga0316588_1027172 Ga0316588_10271722 223
73 3300033541 Ga0316596_1001016 Ga0316596_10010163 223
74 3300033541 Ga0316596_1001814 Ga0316596_10018144 223
75 3300033541 Ga0316596_1003948 Ga0316596_10039482 223
76 3300033541 Ga0316596_1018074 Ga0316596_10180743 223
77 3300033541 Ga0316596_1020202 Ga0316596_10202021 223
78 3300035398 Ga0316574_0010198 Ga0316574_0010198_2828_3532 223
79 3300035398 Ga0316574_0043730 Ga0316574_0043730_374_1078 223
80 3300035398 Ga0316574_0083416 Ga0316574_0083416_852_1610 223
81 3300036647 Ga0316582_0032769 Ga0316582_0032769_394_1098 223
82 3300036647 Ga0316582_0061796 Ga0316582_0061796_1379_2083 223
83 3300036647 Ga0316582_0171157 Ga0316582_0171157_420_1124 223
84 3300036647 Ga0316582_0224965 Ga0316582_0224965_352_1056 223
85 3300036712 Ga0316584_0007294 Ga0316584_0007294_5530_6234 223
86 3300036712 Ga0316584_0025940 Ga0316584_0025940_1506_2264 223
87 3300036712 Ga0316584_0035352 Ga0316584_0035352_2550_3254 223
88 3300036712 Ga0316584_0041422 Ga0316584_0041422_2112_2816 223
89 3300036712 Ga0316584_0051851 Ga0316584_0051851_366_1070 223
90 3300036712 Ga0316584_0278016 Ga0316584_0278016_383_1087 223
91 3300036712 Ga0316584_0369754 Ga0316584_0369754_38_742 223
92 3300039093 Ga0400489_87136 Ga0400489_87136_168_872 223
93 3300044712 Ga0453684_0392328 Ga0453684_0392328_779_1483 223
94 3300031665 Ga0316575_10125986 Ga0316575_101259861 224
95 3300032133 Ga0316583_10023441 Ga0316583_100234412 224
96 3300032168 Ga0316593_10000278 Ga0316593_100002785 224
97 3300032168 Ga0316593_10000848 Ga0316593_100008484 224
98 3300032168 Ga0316593_10001195 Ga0316593_100011957 224
99 3300032168 Ga0316593_10002697 Ga0316593_100026973 224
100 3300032168 Ga0316593_10006739 Ga0316593_100067391 224
101 3300032168 Ga0316593_10052093 Ga0316593_100520931 224
102 3300032168 Ga0316593_10102103 Ga0316593_101021031 224
103 3300033529 Ga0316587_1033633 Ga0316587_10336331 224
104 3300033541 Ga0316596_1001482 Ga0316596_10014824 224
105 3300036647 Ga0316582_0010203 Ga0316582_0010203_514_1218 224
106 3300038725 Ga0400484_18778 Ga0400484_18778_11360_12064 224
107 3300038726 Ga0400490_07105 Ga0400490_07105_325_1029 224
108 3300038741 Ga0400488_07617 Ga0400488_07617_905_1684 224
109 3300039062 Ga0400483_182886 Ga0400483_182886_385_1086 224
110 3300039062 Ga0400483_216594 Ga0400483_216594_1322_2041 224
111 3300039093 Ga0400489_74550 Ga0400489_74550_3312_4016 224
112 3300044712 Ga0453684_0035213 Ga0453684_0035213_4382_5092 224
113 3300032168 Ga0316593_10000553 Ga0316593_100005534 225
114 3300032168 Ga0316593_10022864 Ga0316593_100228642 225
115 3300033541 Ga0316596_1004900 Ga0316596_10049004 225
116 3300033541 Ga0316596_1004928 Ga0316596_10049284 225
117 3300033541 Ga0316596_1014376 Ga0316596_10143762 225
118 3300036647 Ga0316582_0400524 Ga0316582_0400524_23_727 225
119 3300036712 Ga0316584_0168633 Ga0316584_0168633_397_1101 225
120 3300038726 Ga0400490_18978 Ga0400490_18978_1909_2613 225
121 3300038735 Ga0400485_14867 Ga0400485_14867_5502_6206 225
122 3300038742 Ga0400486_30281 Ga0400486_30281_1960_2664 225
123 3300039062 Ga0400483_120099 Ga0400483_120099_46055_46759 225
124 3300033541 Ga0316596_1022145 Ga0316596_10221452 226
125 3300032168 Ga0316593_10023812 Ga0316593_100238121 227
126 3300033541 Ga0316596_1007874 Ga0316596_10078743 227
127 iso_pu_bacteria 2740891818 2740990523 227
128 iso_pu_bacteria 2523533628 2524002999 228
129 3300005617 Ga0068859_100571783 Ga0068859_1005717832 232
130 3300006931 Ga0097620_100571747 Ga0097620_1005717472 232
131 3300031733 Ga0316577_10240980 Ga0316577_102409801 232
132 3300033541 Ga0316596_1018195 Ga0316596_10181951 232
133 3300036647 Ga0316582_0279725 Ga0316582_0279725_64_810 232
134 3300036712 Ga0316584_0114634 Ga0316584_0114634_1099_1845 232
135 3300028577 Ga0265318_10011693 Ga0265318_100116932 233
136 3300031665 Ga0316575_10011870 Ga0316575_100118702 233
137 3300031665 Ga0316575_10064218 Ga0316575_100642182 233
138 3300031691 Ga0316579_10002337 Ga0316579_100023372 233
139 3300031691 Ga0316579_10010160 Ga0316579_100101603 233
140 3300031691 Ga0316579_10151585 Ga0316579_101515851 233
141 3300031727 Ga0316576_10048913 Ga0316576_100489132 233
142 3300031727 Ga0316576_10092733 Ga0316576_100927333 233
143 3300031727 Ga0316576_10116397 Ga0316576_101163972 233
144 3300031728 Ga0316578_10000273 Ga0316578_100002739 233
145 3300031733 Ga0316577_10009073 Ga0316577_100090733 233
146 3300031733 Ga0316577_10124345 Ga0316577_101243452 233
147 3300031733 Ga0316577_10361669 Ga0316577_103616691 233
148 3300032133 Ga0316583_10005081 Ga0316583_100050814 233
149 3300032133 Ga0316583_10051425 Ga0316583_100514252 233
150 3300032168 Ga0316593_10000031 Ga0316593_100000316 233
151 3300032168 Ga0316593_10010274 Ga0316593_100102744 233
152 3300032168 Ga0316593_10010596 Ga0316593_100105963 233
153 3300032168 Ga0316593_10010852 Ga0316593_100108522 233
154 3300032168 Ga0316593_10014889 Ga0316593_100148893 233
155 3300032168 Ga0316593_10018705 Ga0316593_100187052 233
156 3300032168 Ga0316593_10055552 Ga0316593_100555523 233
157 3300032168 Ga0316593_10121961 Ga0316593_101219612 233
158 3300033524 Ga0316592_1000462 Ga0316592_100046210 233
159 3300033524 Ga0316592_1000536 Ga0316592_10005366 233
160 3300033524 Ga0316592_1014427 Ga0316592_10144272 233
161 3300033524 Ga0316592_1021045 Ga0316592_10210452 233
162 3300033524 Ga0316592_1040699 Ga0316592_10406992 233
163 3300033528 Ga0316588_1005805 Ga0316588_10058053 233
164 3300033528 Ga0316588_1017494 Ga0316588_10174942 233
165 3300033528 Ga0316588_1026560 Ga0316588_10265601 233
166 3300033528 Ga0316588_1082786 Ga0316588_10827861 233
167 3300033541 Ga0316596_1000058 Ga0316596_10000585 233
168 3300033541 Ga0316596_1000988 Ga0316596_10009884 233
169 3300033541 Ga0316596_1002322 Ga0316596_10023223 233
170 3300033541 Ga0316596_1002914 Ga0316596_10029143 233
171 3300033541 Ga0316596_1005115 Ga0316596_10051154 233
172 3300033541 Ga0316596_1009511 Ga0316596_10095112 233
173 3300033541 Ga0316596_1010054 Ga0316596_10100541 233
174 3300033541 Ga0316596_1012785 Ga0316596_10127852 233
175 3300033541 Ga0316596_1014968 Ga0316596_10149682 233
176 3300033541 Ga0316596_1046790 Ga0316596_10467902 233
177 3300035398 Ga0316574_0004768 Ga0316574_0004768_2247_2963 233
178 3300035398 Ga0316574_0202251 Ga0316574_0202251_231_947 233
179 3300036647 Ga0316582_0009633 Ga0316582_0009633_3478_4194 233
180 3300036647 Ga0316582_0020763 Ga0316582_0020763_3129_3833 233
181 3300036647 Ga0316582_0030582 Ga0316582_0030582_319_1035 233
182 3300036712 Ga0316584_0017588 Ga0316584_0017588_1877_2602 233
183 3300036712 Ga0316584_0023364 Ga0316584_0023364_2085_2789 233
184 3300036712 Ga0316584_0044037 Ga0316584_0044037_1547_2263 233
185 3300037588 Ga0316581_0128752 Ga0316581_0128752_56_760 233
186 3300038725 Ga0400484_03429 Ga0400484_03429_2705_3406 233
187 3300038726 Ga0400490_07384 Ga0400490_07384_193_897 233
188 3300038726 Ga0400490_18584 Ga0400490_18584_866_1570 233
189 3300038726 Ga0400490_40199 Ga0400490_40199_1703_2443 233
190 3300038727 Ga0400491_02605 Ga0400491_02605_2152_2856 233
191 3300038727 Ga0400491_23551 Ga0400491_23551_82_786 233
192 3300038735 Ga0400485_05635 Ga0400485_05635_1906_2607 233
193 3300038735 Ga0400485_10369 Ga0400485_10369_11735_12439 233
194 3300038735 Ga0400485_12186 Ga0400485_12186_12856_13560 233
195 3300038741 Ga0400488_37057 Ga0400488_37057_1485_2189 233
196 3300038741 Ga0400488_59906 Ga0400488_59906_1506_2246 233
197 3300038742 Ga0400486_07167 Ga0400486_07167_2173_2877 233
198 3300038742 Ga0400486_19544 Ga0400486_19544_1909_2610 233
199 3300038742 Ga0400486_22210 Ga0400486_22210_1438_2142 233
200 3300039062 Ga0400483_067094 Ga0400483_067094_494_1198 233
201 3300039062 Ga0400483_103978 Ga0400483_103978_428_1132 233
202 3300039062 Ga0400483_143180 Ga0400483_143180_1784_2488 233
203 3300039062 Ga0400483_159306 Ga0400483_159306_176_880 233
204 3300039062 Ga0400483_228169 Ga0400483_228169_1595_2299 233
205 3300039062 Ga0400483_257333 Ga0400483_257333_8736_9440 233
206 3300039093 Ga0400489_53490 Ga0400489_53490_10075_10776 233
207 3300039093 Ga0400489_59643 Ga0400489_59643_2152_2856 233
208 3300039110 Ga0400487_07882 Ga0400487_07882_397_1101 233
209 3300039110 Ga0400487_22368 Ga0400487_22368_302_1006 233
210 3300039110 Ga0400487_32098 Ga0400487_32098_2173_2877 233
211 3300039110 Ga0400487_41192 Ga0400487_41192_11620_12324 233
212 3300042876 Ga0451577_0029947 Ga0451577_0029947_3122_3829 233
213 3300042876 Ga0451577_0053967 Ga0451577_0053967_1929_2633 233
214 3300042876 Ga0451577_0381668 Ga0451577_0381668_103_804 233
215 3300044712 Ga0453684_0012653 Ga0453684_0012653_10698_11402 233
216 3300044712 Ga0453684_0035202 Ga0453684_0035202_4138_4845 233
217 3300044712 Ga0453684_0040543 Ga0453684_0040543_3691_4395 233
218 3300044712 Ga0453684_0449139 Ga0453684_0449139_42_743 233
219 3300045051 Ga0451576_0001727 Ga0451576_0001727_1791_2492 233
220 3300045051 Ga0451576_0548203 Ga0451576_0548203_283_984 233
221 3300005518 Ga0070699_100372434 Ga0070699_1003724342 235
222 3300025910 Ga0207684_10137551 Ga0207684_101375514 235
223 3300025922 Ga0207646_10115472 Ga0207646_101154723 235

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00687

Ribosomal_L1

Ribosomal protein L1p/L10e family

30

222

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4v8y-assembly1.cif.gz_CL cryo-em reconstruction of the 80s-eif5b-met-itrnamet eukaryotic translation initiation complex 0.9587 4 228
7p7t-assembly1.cif.gz_F poxta-eq2 antibiotic resistance abcf bound to e. faecalis 70s ribosome, state iii 0.958 4 229
2hw8-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9568 3 229
5npm-assembly1.cif.gz_A crystal structure of mutant ribosomal protein tthl1 lacking 8 n-terminal residues in complex with 80nt 23s rna from thermus thermophilus 0.955 19 229
4v5f-assembly1.cif.gz_BC error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9542 5 228
ID Description Score Start End Superfamily
af_Q60E59_194_280_3.40.50.790 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Ribosomal protein L1/L10, domain II 0.9876 74 161 3.40.50.790
af_Q60E59_194_280_3.40.50.790 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Ribosomal protein L1/L10, domain II 0.9766 74 161 3.40.50.790
af_P9WHC7_16_229_3.30.190.20 Alpha Beta;2-Layer Sandwich;Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase;Ribosomal protein L1/L10, rRNA-binding domain 0.9667 16 228 3.30.190.20
af_I1L5L1_126_340_3.30.190.20 Alpha Beta;2-Layer Sandwich;Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase;Ribosomal protein L1/L10, rRNA-binding domain 0.9616 18 231 3.30.190.20
1zhoG02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Ribosomal protein L1/L10, domain II 0.9526 69 161 3.40.50.790
ID Description Score Start End GO Terms
AF-A0A3C0R701-F1-model_v4 Ribosomal protein 0.99 60 231 GO:0003735
GO:0006412
GO:0006417
GO:0015934
GO:0019843
AF-A0A099DCT0-F1-model_v4 deleted 0.9869 69 208
AF-A0A4Q6EU90-F1-model_v4 deleted 0.982 70 231
AF-A0A6H9RWV4-F1-model_v4 Ribosomal protein 0.9819 62 212 GO:0003735
GO:0006412
GO:0006417
GO:0019843
GO:0022625
AF-A0A6A5L9E3-F1-model_v4 deleted 0.9775 36 228

Feature Viewer

pLDDT pTM Quality
77.76 0.68 Medium
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Predicted Structure (AlphaFold2)

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