F335689

General Info

Members Datasets Scaffolds Average Seq Length
223 153 220 466

Family's Representative Sequence

Representative Sequence 3300025940|Ga0207691_10035075|Ga0207691_100350755
Length 528
Sequence MSDAPRFHVRELALHERPVTLRLPFRFGVVTLTECPQAFAHARIELPDGRSSWGGAAELMAPKWFDKNLSLSNDDNFAQLRDVLELARAAYLADPSADSAFGHFARHHDAHQAACAQRGHNPLLASYGPALLDRALLDALCRALGASFYAALRSNRVGLGTRHPQFAGFAWDGFLSALAPAPSIAARHTVGLVDAITAADLTQPVNDGLPETLEQVIARYGHRHFKLKVGGRIDDDVARLTRIAGVLDRSAEPYFASIDGNEQYDGIEGVAELLACMRATPALARLWAAIGFVEQPITRQHALEVDVRPLARSKPLIIDESDGTLDAFVQASARGYSGISSKTCKGLYKSLLNAARCAQWNAQERAPRYFMSGEDLTTQAGLAVQQDLALVNLLGITHVERNGHHYVDGMAALPRAEQQAFLRAHADLYEHSHGATRLRIRDGRLAIGSLDCTGYASAAQPDWSALSAVAGSAAALVDKLDALLLHGTMSPAMRDGLTAAIGASADPLTRARTAYYLVVTSSEYQVER

Samples

Sample ID Description Type Environment
1 2738541307 Variovorax sp. GV008 Isolate Unclassified
2 2738543013 Variovorax sp. BT01 Isolate Unclassified
3 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
4 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
5 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
29 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
30 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300009984 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_127 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
45 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
61 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
65 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
66 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
67 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
68 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
71 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
72 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
73 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
74 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
75 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
76 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
79 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
86 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
87 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
88 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
89 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
90 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
91 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
92 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
93 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
94 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
95 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
96 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
97 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
98 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
99 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
100 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
101 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
102 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
103 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
104 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
105 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
106 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
107 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
108 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
109 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
122 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
123 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
127 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
128 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
138 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
139 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
140 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
143 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
144 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
147 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
148 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
149 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
150 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
151 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
152 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
153 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.65
Metatranscriptomes 0
Isolates 1.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.76
Nodule 0
Rhizoplane 0
Rhizosphere 85.2
Stem 0
Stem Tuber 0
Unclassified 4.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055534_1000793 3300003784 Bacteria 14714
2 Ga0055531_10001448 3300003794 Bacteria 17513
3 Ga0065707_10093925 3300005295 Bacteria 3562
4 Ga0068869_100054082 3300005334 Bacteria 2921
5 Ga0070689_100145307 3300005340 Bacteria 1910
6 Ga0070687_100015924 3300005343 Bacteria 3413
7 Ga0070705_100082854 3300005440 Bacteria 1975
8 Ga0070700_100045961 3300005441 Bacteria 2695
9 Ga0070663_100109720 3300005455 Bacteria 2072
10 Ga0070681_10000393 3300005458 Bacteria 35383
11 Ga0068867_100062917 3300005459 Bacteria 2758
12 Ga0070698_100085845 3300005471 Bacteria 3134
13 Ga0070679_100333772 3300005530 Bacteria 1464
14 Ga0068853_100042891 3300005539 Bacteria 3870
15 Ga0070686_100012237 3300005544 Bacteria 4879
16 Ga0070695_100010662 3300005545 Bacteria 5491
17 Ga0070704_100010713 3300005549 Bacteria 5585
18 Ga0070704_100198769 3300005549 Bacteria 1617
19 Ga0068859_100027447 3300005617 Bacteria 5709
20 Ga0068861_100045271 3300005719 Bacteria 3313
21 Ga0068861_100171253 3300005719 Bacteria 1800
22 Ga0068860_100031276 3300005843 Bacteria 5117
23 Ga0068862_100030880 3300005844 Bacteria 4517
24 Ga0068862_100090950 3300005844 Bacteria 2657
25 Ga0075365_10001711 3300006038 Bacteria 10157
26 Ga0075362_10002836 3300006177 Bacteria 5914
27 Ga0075367_10063016 3300006178 Bacteria 2216
28 Ga0075369_10032692 3300006186 Bacteria 2202
29 Ga0075366_10031063 3300006195 Bacteria 3143
30 Ga0075370_10003250 3300006353 Bacteria 7697
31 Ga0075428_100004781 3300006844 Bacteria 15003
32 Ga0075428_100013227 3300006844 Bacteria 9181
33 Ga0075428_100029694 3300006844 Bacteria 6049
34 Ga0075430_100000319 3300006846 Bacteria 34222
35 Ga0075430_100003642 3300006846 Bacteria 12925
36 Ga0075430_100004595 3300006846 Bacteria 11616
37 Ga0075431_100003718 3300006847 Bacteria 14826
38 Ga0075431_100004593 3300006847 Bacteria 13549
39 Ga0075431_100021676 3300006847 Bacteria 6570
40 Ga0075431_100037130 3300006847 Bacteria 5021
41 Ga0075429_100000272 3300006880 Bacteria 36248
42 Ga0075429_100013285 3300006880 Bacteria 7142
43 Ga0068865_100004681 3300006881 Bacteria 8265
44 Ga0097620_100027450 3300006931 Bacteria 5709
45 Ga0111539_10021506 3300009094 Bacteria 7937
46 Ga0111539_10174999 3300009094 Bacteria 2507
47 Ga0114129_10004447 3300009147 Bacteria 19780
48 Ga0114129_10014733 3300009147 Bacteria 11140
49 Ga0114129_10038569 3300009147 Bacteria 6738
50 Ga0105242_10000677 3300009176 Bacteria 26743
51 Ga0105249_10041372 3300009553 Bacteria 4189
52 Ga0105029_100681 3300009984 Bacteria 1892
53 Ga0157378_10106513 3300013297 Bacteria 2565
54 Ga0157379_10031166 3300014968 Bacteria 4750
55 Ga0209130_1001394 3300025284 Bacteria 16210
56 Ga0209675_1001970 3300025291 Bacteria 11023
57 Ga0209676_1005274 3300025292 Bacteria 6829
58 Ga0209050_1010153 3300025298 Bacteria 4684
59 Ga0209051_1000272 3300025303 Bacteria 86518
60 Ga0209257_1000055 3300025304 Bacteria 415534
61 Ga0207707_10001889 3300025912 Bacteria 19120
62 Ga0207652_10113635 3300025921 Bacteria 2404
63 Ga0207709_10066129 3300025935 Bacteria 2276
64 Ga0207691_10035075 3300025940 Bacteria 4661
65 Ga0207639_10042034 3300026041 Bacteria 3424
66 Ga0207708_10120225 3300026075 Bacteria 2046
67 Ga0207708_10140155 3300026075 Bacteria 1896
68 Ga0207648_10035299 3300026089 Bacteria 4406
69 Ga0207674_10259347 3300026116 Bacteria 1685
70 Ga0207675_100001107 3300026118 Bacteria 26669
71 Ga0209971_1003785 3300027682 Bacteria 3577
72 Ga0207428_10018718 3300027907 Bacteria 5910
73 Ga0268266_10007392 3300028379 Bacteria 9918
74 Ga0268265_10027729 3300028380 Bacteria 4046
75 Ga0268265_10094275 3300028380 Bacteria 2400
76 Ga0268264_10090877 3300028381 Bacteria 2632
77 Ga0307515_10000152 3300028794 Bacteria 167305
78 Ga0307515_10039149 3300028794 Bacteria 7554
79 Ga0307511_10000043 3300030521 Bacteria 101232
80 Ga0265327_10014965 3300031251 Bacteria 5045
81 Ga0307408_100021094 3300031548 Bacteria 4404
82 Ga0307408_100036836 3300031548 Bacteria 3441
83 Ga0265314_10048717 3300031711 Bacteria 2971
84 Ga0307416_100155621 3300032002 Bacteria 2104
85 Ga0307411_10062545 3300032005 Bacteria 2483
86 Ga0307415_100028446 3300032126 Bacteria 3557
87 Ga0316583_10015116 3300032133 Bacteria 2778
88 Ga0373954_0000003 3300035118 Bacteria 137757
89 Ga0373935_0006765 3300035692 Bacteria 6850
90 Ga0373933_0011065 3300035724 Bacteria 4959
91 Ga0373947_0086849 3300035725 Bacteria 1945
92 Ga0373937_0000131 3300036401 Bacteria 72767
93 Ga0316582_0020203 3300036647 Bacteria 3912
94 Ga0395899_0008753 3300037312 Bacteria 7789
95 Ga0395900_0026928 3300037418 Bacteria 5884
96 Ga0395900_0056051 3300037418 Bacteria 4057
97 Ga0395900_0068665 3300037418 Bacteria 3642
98 Ga0395898_0007453 3300037466 Bacteria 11615
99 Ga0395898_0037357 3300037466 Bacteria 4818
100 Ga0395898_0049960 3300037466 Bacteria 4095
101 Ga0395905_0000811 3300037471 Bacteria 41049
102 Ga0395905_0005128 3300037471 Bacteria 13457
103 Ga0395905_0007119 3300037471 Bacteria 11179
104 Ga0395905_0009567 3300037471 Bacteria 9463
105 Ga0395905_0035169 3300037471 Bacteria 4703
106 Ga0395905_0132589 3300037471 Bacteria 2343
107 Ga0436364_1394091 3300037853 Bacteria 3786
108 Ga0395901_0014712 3300038443 Bacteria 7951
109 Ga0395901_0022205 3300038443 Bacteria 6503
110 Ga0395901_0048341 3300038443 Bacteria 4417
111 Ga0395901_0050425 3300038443 Bacteria 4324
112 Ga0395901_0102024 3300038443 Bacteria 3010
113 Ga0395901_0232848 3300038443 Bacteria 1923
114 Ga0439436_0003624 3300041404 Bacteria 4703
115 Ga0439439_0002893 3300041406 Bacteria 3727
116 Ga0439461_0001743 3300041410 Bacteria 3398
117 Ga0439466_0000854 3300041411 Bacteria 11623
118 Ga0439466_0005369 3300041411 Bacteria 4900
119 Ga0439465_0000034 3300041413 Bacteria 28027
120 Ga0439431_0000727 3300041997 Bacteria 7098
121 Ga0439431_0012616 3300041997 Bacteria 1944
122 Ga0439433_0013573 3300041999 Bacteria 1790
123 Ga0439442_016833 3300042002 Bacteria 1508
124 Ga0439445_0000511 3300042004 Bacteria 7863
125 Ga0439452_001608 3300042010 Bacteria 8924
126 Ga0439446_0010597 3300042156 Bacteria 2486
127 Ga0439434_0027049 3300042435 Bacteria 1733
128 Ga0439444_0005482 3300042437 Bacteria 1883
129 Ga0451577_0003742 3300042876 Bacteria 16590
130 Ga0466977_0001007 3300044666 Bacteria 10833
131 Ga0466961_0005285 3300044693 Bacteria 8125
132 Ga0466959_0081588 3300045049 Bacteria 2330
133 Ga0495627_011891 3300046453 Bacteria 3105
134 Ga0495642_0047939 3300046528 Bacteria 1751
135 Ga0495647_0010678 3300046681 Bacteria 3131
136 Ga0495669_0009180 3300046684 Bacteria 4166
137 Ga0495684_0136328 3300047471 Unclassified 1842
138 Ga0496123_0064781 3300048926 Bacteria 2327
139 Ga0496126_0030728 3300048929 Bacteria 5086
140 Ga0501032_0002170 3300049569 Bacteria 15449
141 Ga0501033_0002364 3300049570 Bacteria 16092
142 Ga0501034_0106026 3300049571 Bacteria 2803
143 Ga0501036_0015646 3300049572 Bacteria 6337
144 Ga0501037_0000124 3300049573 Bacteria 71522
145 Ga0501038_0037428 3300049574 Bacteria 4254
146 Ga0501038_0042981 3300049574 Bacteria 3933
147 Ga0501039_0008462 3300049575 Bacteria 7842
148 Ga0501039_0019792 3300049575 Bacteria 5160
149 Ga0501040_0091121 3300049576 Bacteria 2119
150 Ga0501041_0035637 3300049577 Bacteria 3015
151 Ga0501042_0154626 3300049578 Bacteria 1654
152 Ga0501043_0000003 3300049579 Bacteria 318844
153 Ga0501043_0026228 3300049579 Bacteria 4572
154 Ga0501047_0001674 3300049581 Bacteria 21567
155 Ga0501047_0090391 3300049581 Bacteria 2939
156 Ga0501067_0076659 3300049583 Bacteria 1852
157 Ga0501068_0006559 3300049584 Bacteria 6419
158 Ga0501069_0000003 3300049585 Bacteria 210301
159 Ga0501069_0006358 3300049585 Bacteria 6173
160 Ga0501070_0000477 3300049586 Bacteria 36435
161 Ga0501070_0001569 3300049586 Bacteria 20310
162 Ga0501070_0078050 3300049586 Bacteria 2740
163 Ga0501071_0001232 3300049587 Bacteria 14484
164 Ga0501071_0043565 3300049587 Bacteria 3218
165 Ga0501071_0077616 3300049587 Bacteria 2426
166 Ga0501072_0014159 3300049588 Bacteria 6112
167 Ga0501073_0012494 3300049589 Bacteria 6195
168 Ga0501074_0000007 3300049590 Bacteria 111136
169 Ga0501075_0003293 3300049591 Bacteria 10814
170 Ga0501076_0002390 3300049592 Bacteria 12853
171 Ga0501079_0017620 3300049741 Bacteria 5455
172 Ga0501079_0161307 3300049741 Bacteria 1748
173 Ga0501079_0179146 3300049741 Bacteria 1654
174 Ga0501080_0001339 3300049742 Bacteria 20548
175 Ga0501080_0045266 3300049742 Bacteria 4096
176 Ga0501080_0074902 3300049742 Bacteria 3149
177 Ga0501081_0001649 3300049743 Bacteria 13814
178 Ga0501083_0000024 3300049744 Bacteria 123029
179 Ga0501035_0001743 3300049822 Bacteria 21975
180 Ga0501035_0006926 3300049822 Bacteria 10587
181 Ga0501035_0022430 3300049822 Bacteria 5798
182 Ga0501035_0054919 3300049822 Bacteria 3557
183 Ga0501035_0155463 3300049822 Bacteria 1982
184 Ga0501044_0000016 3300049823 Bacteria 231626
185 Ga0501044_0001406 3300049823 Bacteria 28215
186 Ga0501044_0080765 3300049823 Bacteria 3293
187 Ga0501044_0088975 3300049823 Bacteria 3117
188 nmdc:mga03683_1222_c1 3300050489 Bacteria 7587
189 nmdc:mga0yw44_30661_c1 3300050492 Bacteria 3119
190 nmdc:mga0k408_10046_c1 3300050493 Bacteria 5112
191 nmdc:mga0k408_11411_c2 3300050493 Bacteria 4253
192 nmdc:mga0k408_35469_c1 3300050493 Bacteria 2860
193 nmdc:mga07m45_1407_c1 3300050496 Bacteria 11010
194 nmdc:mga05p37_133792_c1 3300050507 Bacteria 3042
195 nmdc:mga05p37_530_c1 3300050507 Bacteria 42063
196 nmdc:mga05p37_8525_c1 3300050507 Bacteria 12118
197 nmdc:mga09592_152380_c1 3300050508 Bacteria 1995
198 nmdc:mga09592_26776_c1 3300050508 Bacteria 4780
199 nmdc:mga09592_58_c1 3300050508 Bacteria 61599
200 nmdc:mga0qj67_15460_c1 3300050509 Bacteria 5779
201 nmdc:mga0qj67_17602_c1 3300050509 Bacteria 5436
202 nmdc:mga0qj67_23370_c1 3300050509 Bacteria 4755
203 nmdc:mga0qj67_252_c1 3300050509 Bacteria 36647
204 nmdc:mga06r32_152150_c1 3300050510 Bacteria 2293
205 nmdc:mga06r32_16215_c1 3300050510 Bacteria 6786
206 nmdc:mga06r32_2906_c1 3300050510 Bacteria 15376
207 nmdc:mga06r32_31101_c1 3300050510 Bacteria 5011
208 nmdc:mga06r32_4369_c1 3300050510 Bacteria 12643
209 nmdc:mga06r32_69736_c1 3300050510 Bacteria 3398
210 nmdc:mga08y16_48233_c1 3300050511 Bacteria 4457
211 nmdc:mga08y16_9631_c1 3300050511 Bacteria 10144
212 nmdc:mga0a205_13044_c1 3300050515 Bacteria 7716
213 Ga0500641_0042250 3300053096 Bacteria 1847
214 Ga0500562_002899 3300053108 Bacteria 4278
215 Ga0500568_0014892 3300053139 Bacteria 3496
216 Ga0500604_0004287 3300053151 Bacteria 3787
217 Ga0501084_0157056 3300054114 Bacteria 1918
218 Ga0501082_0107943 3300060353 Bacteria 2408
219 Ga0530510_0000731 3300061734 Bacteria 21331
220 Ga0530510_0009460 3300061734 Bacteria 6832

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049822 Ga0501035_0155463 Ga0501035_0155463_732_1961 400
2 3300049579 Ga0501043_0026228 Ga0501043_0026228_30_1388 417
3 3300049575 Ga0501039_0008462 Ga0501039_0008462_1388_2746 419
4 3300037312 Ga0395899_0008753 Ga0395899_0008753_387_1796 425
5 3300037418 Ga0395900_0026928 Ga0395900_0026928_1970_3379 425
6 3300037418 Ga0395900_0068665 Ga0395900_0068665_899_2308 425
7 3300037466 Ga0395898_0037357 Ga0395898_0037357_569_1978 425
8 3300038443 Ga0395901_0048341 Ga0395901_0048341_769_2178 425
9 3300038443 Ga0395901_0050425 Ga0395901_0050425_235_1644 425
10 3300050509 nmdc:mga0qj67_17602_c1 nmdc:mga0qj67_17602_c1_3760_5106 425
11 3300005340 Ga0070689_100145307 Ga0070689_1001453072 426
12 3300005544 Ga0070686_100012237 Ga0070686_1000122372 426
13 3300035692 Ga0373935_0006765 Ga0373935_0006765_4738_6033 426
14 3300049581 Ga0501047_0090391 Ga0501047_0090391_740_2149 435
15 3300005440 Ga0070705_100082854 Ga0070705_1000828541 436
16 3300005545 Ga0070695_100010662 Ga0070695_1000106622 436
17 3300032002 Ga0307416_100155621 Ga0307416_1001556212 437
18 3300049572 Ga0501036_0015646 Ga0501036_0015646_4613_5938 437
19 3300049574 Ga0501038_0037428 Ga0501038_0037428_477_1802 437
20 3300049575 Ga0501039_0019792 Ga0501039_0019792_1771_3096 437
21 3300049576 Ga0501040_0091121 Ga0501040_0091121_446_1771 437
22 3300049581 Ga0501047_0001674 Ga0501047_0001674_9556_10965 437
23 3300049585 Ga0501069_0006358 Ga0501069_0006358_3091_4500 437
24 3300049586 Ga0501070_0001569 Ga0501070_0001569_16409_17818 437
25 3300049587 Ga0501071_0043565 Ga0501071_0043565_956_2365 437
26 3300049587 Ga0501071_0077616 Ga0501071_0077616_774_2099 437
27 3300049588 Ga0501072_0014159 Ga0501072_0014159_3494_4819 437
28 3300049591 Ga0501075_0003293 Ga0501075_0003293_3647_4972 437
29 3300049592 Ga0501076_0002390 Ga0501076_0002390_9531_10856 437
30 3300049741 Ga0501079_0017620 Ga0501079_0017620_659_1984 437
31 3300049742 Ga0501080_0045266 Ga0501080_0045266_1380_2789 437
32 3300049743 Ga0501081_0001649 Ga0501081_0001649_8134_9459 437
33 3300049822 Ga0501035_0001743 Ga0501035_0001743_2085_3494 437
34 3300049823 Ga0501044_0001406 Ga0501044_0001406_7225_8634 437
35 3300054114 Ga0501084_0157056 Ga0501084_0157056_520_1845 437
36 3300060353 Ga0501082_0107943 Ga0501082_0107943_457_1782 437
37 3300061734 Ga0530510_0000731 Ga0530510_0000731_580_1905 437
38 3300006844 Ga0075428_100029694 Ga0075428_1000296942 438
39 3300006846 Ga0075430_100000319 Ga0075430_1000003195 438
40 3300027682 Ga0209971_1003785 Ga0209971_10037852 438
41 3300042437 Ga0439444_0005482 Ga0439444_0005482_451_1779 438
42 3300050509 nmdc:mga0qj67_252_c1 nmdc:mga0qj67_252_c1_31503_32915 438
43 3300050510 nmdc:mga06r32_152150_c1 nmdc:mga06r32_152150_c1_55_1383 438
44 3300050510 nmdc:mga06r32_69736_c1 nmdc:mga06r32_69736_c1_1249_2661 438
45 3300009176 Ga0105242_10000677 Ga0105242_1000067727 439
46 3300005343 Ga0070687_100015924 Ga0070687_1000159242 440
47 3300005471 Ga0070698_100085845 Ga0070698_1000858453 440
48 3300005549 Ga0070704_100010713 Ga0070704_1000107137 440
49 3300005617 Ga0068859_100027447 Ga0068859_1000274471 440
50 3300006844 Ga0075428_100013227 Ga0075428_1000132278 440
51 3300006847 Ga0075431_100003718 Ga0075431_10000371812 440
52 3300006880 Ga0075429_100000272 Ga0075429_10000027236 440
53 3300006931 Ga0097620_100027450 Ga0097620_1000274501 440
54 3300009094 Ga0111539_10174999 Ga0111539_101749993 440
55 3300009147 Ga0114129_10014733 Ga0114129_1001473312 440
56 3300009553 Ga0105249_10041372 Ga0105249_100413723 440
57 3300026075 Ga0207708_10120225 Ga0207708_101202252 440
58 3300026116 Ga0207674_10259347 Ga0207674_102593472 440
59 3300035118 Ga0373954_0000003 Ga0373954_0000003_41031_42374 440
60 3300035724 Ga0373933_0011065 Ga0373933_0011065_399_1742 440
61 3300036401 Ga0373937_0000131 Ga0373937_0000131_59866_61209 440
62 3300050507 nmdc:mga05p37_530_c1 nmdc:mga05p37_530_c1_30900_32249 440
63 3300050508 nmdc:mga09592_58_c1 nmdc:mga09592_58_c1_23183_24532 440
64 3300050510 nmdc:mga06r32_4369_c1 nmdc:mga06r32_4369_c1_2459_3808 440
65 3300050511 nmdc:mga08y16_48233_c1 nmdc:mga08y16_48233_c1_77_1426 440
66 3300005549 Ga0070704_100198769 Ga0070704_1001987692 441
67 3300005458 Ga0070681_10000393 Ga0070681_1000039318 444
68 3300005530 Ga0070679_100333772 Ga0070679_1003337721 444
69 3300006846 Ga0075430_100004595 Ga0075430_1000045956 444
70 3300006847 Ga0075431_100037130 Ga0075431_1000371302 444
71 3300025912 Ga0207707_10001889 Ga0207707_1000188913 444
72 3300025921 Ga0207652_10113635 Ga0207652_101136353 444
73 3300050509 nmdc:mga0qj67_23370_c1 nmdc:mga0qj67_23370_c1_304_1701 444
74 3300050510 nmdc:mga06r32_31101_c1 nmdc:mga06r32_31101_c1_383_1780 444
75 3300046528 Ga0495642_0047939 Ga0495642_0047939_291_1646 445
76 3300046684 Ga0495669_0009180 Ga0495669_0009180_585_1940 445
77 3300005539 Ga0068853_100042891 Ga0068853_1000428913 450
78 3300026041 Ga0207639_10042034 Ga0207639_100420342 450
79 3300037471 Ga0395905_0007119 Ga0395905_0007119_3374_4747 450
80 3300049577 Ga0501041_0035637 Ga0501041_0035637_160_1620 451
81 3300049578 Ga0501042_0154626 Ga0501042_0154626_131_1591 451
82 3300049741 Ga0501079_0161307 Ga0501079_0161307_144_1604 451
83 3300049742 Ga0501080_0074902 Ga0501080_0074902_266_1726 451
84 3300061734 Ga0530510_0009460 Ga0530510_0009460_5303_6763 451
85 3300037466 Ga0395898_0049960 Ga0395898_0049960_1046_2431 452
86 3300038443 Ga0395901_0102024 Ga0395901_0102024_1145_2530 452
87 3300037471 Ga0395905_0000811 Ga0395905_0000811_20701_22095 454
88 3300037471 Ga0395905_0009567 Ga0395905_0009567_2222_3607 454
89 3300042876 Ga0451577_0003742 Ga0451577_0003742_7686_9164 454
90 3300035725 Ga0373947_0086849 Ga0373947_0086849_455_1876 455
91 3300049586 Ga0501070_0078050 Ga0501070_0078050_607_2016 455
92 3300049822 Ga0501035_0054919 Ga0501035_0054919_339_1748 455
93 3300037418 Ga0395900_0056051 Ga0395900_0056051_1355_2752 456
94 3300037466 Ga0395898_0007453 Ga0395898_0007453_5559_6956 456
95 3300038443 Ga0395901_0014712 Ga0395901_0014712_5441_6838 456
96 3300006178 Ga0075367_10063016 Ga0075367_100630162 457
97 3300037471 Ga0395905_0005128 Ga0395905_0005128_7750_9150 457
98 3300037471 Ga0395905_0035169 Ga0395905_0035169_1284_2681 457
99 3300038443 Ga0395901_0022205 Ga0395901_0022205_979_2376 457
100 3300044693 Ga0466961_0005285 Ga0466961_0005285_4211_5608 457
101 3300045049 Ga0466959_0081588 Ga0466959_0081588_86_1483 457
102 3300049571 Ga0501034_0106026 Ga0501034_0106026_577_1977 457
103 3300049574 Ga0501038_0042981 Ga0501038_0042981_641_2041 457
104 3300049823 Ga0501044_0080765 Ga0501044_0080765_1120_2520 457
105 iso_pu_bacteria 2885192300 2885195609 457
106 3300046681 Ga0495647_0010678 Ga0495647_0010678_309_1742 458
107 3300003794 Ga0055531_10001448 Ga0055531_1000144811 459
108 3300005295 Ga0065707_10093925 Ga0065707_100939252 459
109 3300005334 Ga0068869_100054082 Ga0068869_1000540823 459
110 3300005441 Ga0070700_100045961 Ga0070700_1000459612 459
111 3300005459 Ga0068867_100062917 Ga0068867_1000629172 459
112 3300005719 Ga0068861_100045271 Ga0068861_1000452712 459
113 3300005719 Ga0068861_100171253 Ga0068861_1001712531 459
114 3300005843 Ga0068860_100031276 Ga0068860_1000312763 459
115 3300005844 Ga0068862_100030880 Ga0068862_1000308802 459
116 3300005844 Ga0068862_100090950 Ga0068862_1000909502 459
117 3300006186 Ga0075369_10032692 Ga0075369_100326922 459
118 3300006881 Ga0068865_100004681 Ga0068865_1000046819 459
119 3300013297 Ga0157378_10106513 Ga0157378_101065132 459
120 3300014968 Ga0157379_10031166 Ga0157379_100311663 459
121 3300025303 Ga0209051_1000272 Ga0209051_100027251 459
122 3300025304 Ga0209257_1000055 Ga0209257_1000055350 459
123 3300025935 Ga0207709_10066129 Ga0207709_100661292 459
124 3300025940 Ga0207691_10035075 Ga0207691_100350755 459
125 3300026075 Ga0207708_10140155 Ga0207708_101401552 459
126 3300026089 Ga0207648_10035299 Ga0207648_100352992 459
127 3300026118 Ga0207675_100001107 Ga0207675_10000110719 459
128 3300028380 Ga0268265_10027729 Ga0268265_100277292 459
129 3300028380 Ga0268265_10094275 Ga0268265_100942752 459
130 3300028381 Ga0268264_10090877 Ga0268264_100908773 459
131 3300028794 Ga0307515_10039149 Ga0307515_100391492 459
132 3300030521 Ga0307511_10000043 Ga0307511_1000004381 459
133 3300031251 Ga0265327_10014965 Ga0265327_100149654 459
134 3300031711 Ga0265314_10048717 Ga0265314_100487172 459
135 3300037471 Ga0395905_0132589 Ga0395905_0132589_37_1464 459
136 3300047471 Ga0495684_0136328 Ga0495684_0136328_53_1486 459
137 3300049822 Ga0501035_0022430 Ga0501035_0022430_450_1859 459
138 3300049823 Ga0501044_0088975 Ga0501044_0088975_374_1783 459
139 3300050492 nmdc:mga0yw44_30661_c1 nmdc:mga0yw44_30661_c1_1538_2941 459
140 3300050493 nmdc:mga0k408_10046_c1 nmdc:mga0k408_10046_c1_2084_3526 459
141 3300050493 nmdc:mga0k408_35469_c1 nmdc:mga0k408_35469_c1_1361_2764 459
142 3300053108 Ga0500562_002899 Ga0500562_002899_2462_3871 459
143 3300053139 Ga0500568_0014892 Ga0500568_0014892_1925_3328 459
144 3300053151 Ga0500604_0004287 Ga0500604_0004287_999_2402 459
145 3300006038 Ga0075365_10001711 Ga0075365_100017117 460
146 3300006177 Ga0075362_10002836 Ga0075362_100028365 460
147 3300006195 Ga0075366_10031063 Ga0075366_100310633 460
148 3300006353 Ga0075370_10003250 Ga0075370_100032502 460
149 3300006844 Ga0075428_100004781 Ga0075428_1000047815 460
150 3300006846 Ga0075430_100003642 Ga0075430_1000036424 460
151 3300006847 Ga0075431_100004593 Ga0075431_1000045938 460
152 3300006847 Ga0075431_100021676 Ga0075431_1000216764 460
153 3300006880 Ga0075429_100013285 Ga0075429_1000132854 460
154 3300009094 Ga0111539_10021506 Ga0111539_100215064 460
155 3300009147 Ga0114129_10004447 Ga0114129_100044478 460
156 3300009147 Ga0114129_10038569 Ga0114129_100385694 460
157 3300027907 Ga0207428_10018718 Ga0207428_100187182 460
158 3300028379 Ga0268266_10007392 Ga0268266_100073923 460
159 3300028794 Ga0307515_10000152 Ga0307515_10000152137 460
160 3300031548 Ga0307408_100021094 Ga0307408_1000210942 460
161 3300031548 Ga0307408_100036836 Ga0307408_1000368362 460
162 3300032005 Ga0307411_10062545 Ga0307411_100625452 460
163 3300032126 Ga0307415_100028446 Ga0307415_1000284462 460
164 3300038443 Ga0395901_0232848 Ga0395901_0232848_423_1841 460
165 3300041404 Ga0439436_0003624 Ga0439436_0003624_406_1830 460
166 3300041406 Ga0439439_0002893 Ga0439439_0002893_1701_3125 460
167 3300041410 Ga0439461_0001743 Ga0439461_0001743_1572_2996 460
168 3300041411 Ga0439466_0000854 Ga0439466_0000854_4851_6275 460
169 3300041411 Ga0439466_0005369 Ga0439466_0005369_3099_4523 460
170 3300041413 Ga0439465_0000034 Ga0439465_0000034_9855_11279 460
171 3300041997 Ga0439431_0000727 Ga0439431_0000727_1427_2851 460
172 3300041997 Ga0439431_0012616 Ga0439431_0012616_277_1701 460
173 3300041999 Ga0439433_0013573 Ga0439433_0013573_231_1655 460
174 3300042002 Ga0439442_016833 Ga0439442_016833_12_1436 460
175 3300042004 Ga0439445_0000511 Ga0439445_0000511_5143_6567 460
176 3300042010 Ga0439452_001608 Ga0439452_001608_6668_8092 460
177 3300042156 Ga0439446_0010597 Ga0439446_0010597_730_2154 460
178 3300042435 Ga0439434_0027049 Ga0439434_0027049_119_1543 460
179 3300049569 Ga0501032_0002170 Ga0501032_0002170_11248_12678 460
180 3300049570 Ga0501033_0002364 Ga0501033_0002364_3687_5117 460
181 3300049573 Ga0501037_0000124 Ga0501037_0000124_39206_40636 460
182 3300049579 Ga0501043_0000003 Ga0501043_0000003_91529_92959 460
183 3300049583 Ga0501067_0076659 Ga0501067_0076659_125_1555 460
184 3300049584 Ga0501068_0006559 Ga0501068_0006559_3610_5040 460
185 3300049585 Ga0501069_0000003 Ga0501069_0000003_107104_108534 460
186 3300049586 Ga0501070_0000477 Ga0501070_0000477_14964_16394 460
187 3300049587 Ga0501071_0001232 Ga0501071_0001232_2752_4182 460
188 3300049589 Ga0501073_0012494 Ga0501073_0012494_2989_4419 460
189 3300049590 Ga0501074_0000007 Ga0501074_0000007_13912_15342 460
190 3300049742 Ga0501080_0001339 Ga0501080_0001339_14689_16119 460
191 3300049744 Ga0501083_0000024 Ga0501083_0000024_55060_56490 460
192 3300049822 Ga0501035_0006926 Ga0501035_0006926_683_2113 460
193 3300049823 Ga0501044_0000016 Ga0501044_0000016_107096_108526 460
194 3300050489 nmdc:mga03683_1222_c1 nmdc:mga03683_1222_c1_3959_5374 460
195 3300050493 nmdc:mga0k408_11411_c2 nmdc:mga0k408_11411_c2_1031_2455 460
196 3300050496 nmdc:mga07m45_1407_c1 nmdc:mga07m45_1407_c1_3971_5395 460
197 3300050507 nmdc:mga05p37_133792_c1 nmdc:mga05p37_133792_c1_1547_2980 460
198 3300050507 nmdc:mga05p37_8525_c1 nmdc:mga05p37_8525_c1_2322_3788 460
199 3300050508 nmdc:mga09592_152380_c1 nmdc:mga09592_152380_c1_24_1457 460
200 3300050508 nmdc:mga09592_26776_c1 nmdc:mga09592_26776_c1_1113_2579 460
201 3300050509 nmdc:mga0qj67_15460_c1 nmdc:mga0qj67_15460_c1_1995_3461 460
202 3300050510 nmdc:mga06r32_16215_c1 nmdc:mga06r32_16215_c1_2033_3499 460
203 3300050510 nmdc:mga06r32_2906_c1 nmdc:mga06r32_2906_c1_6113_7546 460
204 3300050511 nmdc:mga08y16_9631_c1 nmdc:mga08y16_9631_c1_3999_5465 460
205 3300050515 nmdc:mga0a205_13044_c1 nmdc:mga0a205_13044_c1_4291_5724 460
206 3300009984 Ga0105029_100681 Ga0105029_1006811 462
207 3300032133 Ga0316583_10015116 Ga0316583_100151162 462
208 3300036647 Ga0316582_0020203 Ga0316582_0020203_1504_2952 462
209 3300049741 Ga0501079_0179146 Ga0501079_0179146_165_1625 462
210 3300053096 Ga0500641_0042250 Ga0500641_0042250_174_1586 462
211 3300005455 Ga0070663_100109720 Ga0070663_1001097201 463
212 3300037853 Ga0436364_1394091 Ga0436364_1394091_494_1933 463
213 3300048929 Ga0496126_0030728 Ga0496126_0030728_567_1979 463
214 3300044666 Ga0466977_0001007 Ga0466977_0001007_4077_5528 464
215 iso_pu_bacteria 2738541307 2738878808 466
216 iso_pu_bacteria 2738543013 2739248571 468
217 3300046453 Ga0495627_011891 Ga0495627_011891_1347_2795 470
218 3300048926 Ga0496123_0064781 Ga0496123_0064781_588_2036 470
219 3300003784 Ga0055534_1000793 Ga0055534_100079310 472
220 3300025284 Ga0209130_1001394 Ga0209130_10013944 472
221 3300025291 Ga0209675_1001970 Ga0209675_10019706 472
222 3300025292 Ga0209676_1005274 Ga0209676_10052742 472
223 3300025298 Ga0209050_1010153 Ga0209050_10101533 472

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13378

MR_MLE_C

Enolase C-terminal domain-like

208

455

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tte-assembly1.cif.gz_A crystal structure of enolase brado_4202 (target efi-501651) from bradyrhizobium complexed with magnesium and mandelic acid 0.7691 5 454
2zc8-assembly1.cif.gz_A crystal structure of n-acylamino acid racemase from thermus thermophilus hb8 0.7649 7 455
3jva-assembly1.cif.gz_G crystal structure of dipeptide epimerase from enterococcus faecalis v583 0.754 7 454
1wue-assembly1.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7498 5 454
1mra-assembly1.cif.gz_A mandelate racemase mutant d270n co-crystallized with (s)-atrolactate 0.7497 6 454
ID Description Score Start End Superfamily
2ppgB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.7767 179 399 3.20.20.120
2chrA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.7666 181 387 3.20.20.120
3toyC02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.763 176 454 3.20.20.120
5xd9A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.7393 182 454 3.20.20.120
3toyC02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.7308 176 454 3.20.20.120
ID Description Score Start End GO Terms
AF-A0A7U2KDI2-F1-model_v4 deleted 0.9712 1 454
AF-A0A1Q3QRR4-F1-model_v4 deleted 0.969 70 454
AF-A0A522LRQ6-F1-model_v4 Uncharacterized protein 0.9675 1 200
AF-A0A4S5JBD1-F1-model_v4 deleted 0.9663 1 470
AF-A0A349SEZ9-F1-model_v4 Mandelate racemase 0.9647 5 428

Feature Viewer

pLDDT pTM Quality
92.17 0.93 High
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Predicted Structure (AlphaFold2)

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