F337000
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 224 | 164 | 448 | 348 |
Family's Representative Sequence
| Representative Sequence | 3300041511|Ga0451855_0788525|Ga0451855_0788525_224_1423 |
| Length | 399 |
| Sequence | LNENKTYRIVEGDFIKTNKWLLPLSWLYGLAVKTRNTMFEMGILKTRSFQIPVISVGNITVGGTGKTPHVEYLVRLLKEQFHVAVLSRGYKRKSKGFIKAGMQTTMPEIGDEPYQMKQKFTDVTIAVDKNRCHGIDMLTEQDKKLDVILLDDAFQHRYVKPGINILLVDYHRLIIYDKLLPAGRLREPLNGKNRADIVIVTKCPKGLNPMEYRVVTKAMDLYPYQRLYFTTLEYAELQPLFTNSSTNIPTFEGLRDTHVLLLTGIASPKQLVHDLSPYTEHLQQHTFADHHLFKEKDIQLVNKTFAEMPSPKIIITTEKDATRLHNVGGLSDEVKKNIYVLPVRICFLQDQENTFNQQIRDYVRKNSRNSILAKGKDDHKSDNSDYSGNRSRTISFRDN |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300041511 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG | Metagenome | Unclassified |
| 2 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 3 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 4 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 5 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 6 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 7 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 8 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 9 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 10 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 12 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 13 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 18 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 19 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 20 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 24 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 25 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 26 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 27 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 28 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 30 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 31 | 3300006942 | Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW | Metagenome | Nodule |
| 32 | 3300006948 | Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 | Metagenome | Nodule |
| 33 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 55 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 56 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 57 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300027361 | Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) | Metagenome | Nodule |
| 82 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 84 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 85 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 86 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 87 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 88 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 89 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 90 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 91 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 92 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 93 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 94 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 95 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 96 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 97 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 98 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 99 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 100 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 101 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 102 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 103 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 104 | 3300041411 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 | Metagenome | Rhizosphere |
| 105 | 3300041486 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG | Metagenome | Rhizoplane |
| 106 | 3300042012 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 | Metagenome | Rhizosphere |
| 107 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 108 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 109 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 110 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 111 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 112 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 113 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 130 | 3300049523 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control | Metagenome | Rhizosphere |
| 131 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 132 | 3300049671 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought | Metagenome | Rhizosphere |
| 133 | 3300049766 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought | Metagenome | Rhizosphere |
| 134 | 3300049776 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought | Metagenome | Rhizosphere |
| 135 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 136 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 137 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 138 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 139 | 3300053123 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere | Metagenome | Endosphere |
| 140 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 141 | 3300053726 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere | Metagenome | Endosphere |
| 142 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 143 | 2519899754 | Flavobacterium sp. F52 | Isolate | Rhizosphere |
| 144 | 2643221667 | Flavobacterium sp. Root420 | Isolate | Unclassified |
| 145 | 2643221716 | Flavobacterium sp. Root901 | Isolate | Unclassified |
| 146 | 2643221725 | Flavobacterium sp. Root935 | Isolate | Unclassified |
| 147 | 2739367866 | Hymenobacter sp. YR204 | Isolate | Unclassified |
| 148 | 2802428842 | Flavobacterium sp. S87F.05.LMB.W.Kidney.N | Isolate | Unclassified |
| 149 | 2816332280 | Flavobacterium johnsoniae GSE09 | Isolate | Unclassified |
| 150 | 2833640130 | Mariniflexile sp. TRM1-10 | Isolate | Rhizosphere |
| 151 | 2857613821 | Flavobacterium sp. R-72247 | Isolate | Unclassified |
| 152 | 2881359912 | Flavobacterium ustbae T13 | Isolate | Rhizosphere |
| 153 | 2896317667 | Sphingobacterium sp. SGR-19 | Isolate | Rhizosphere |
| 154 | 2898713307 | Sphingobacterium sp. SGG-5 | Isolate | Rhizosphere |
| 155 | 2904419702 | Flavobacterium sp. 1355 | Isolate | Rhizosphere |
| 156 | 2904555929 | Flavobacterium sp. 1750 | Isolate | Rhizosphere |
| 157 | 2919191525 | Flavobacterium sp. 2755 | Isolate | Rhizosphere |
| 158 | 2929150217 | Flavobacterium sp. R-74510 Hybrid assembly | Isolate | Unclassified |
| 159 | 2958458903 | Flavobacterium anhuiense RCM74 | Isolate | Rhizosphere |
| 160 | 2977268062 | Flavobacterium sp. SORGH_AS 622 | Isolate | Unclassified |
| 161 | 8054307821 | Flavobacterium soyae SCIV07 | Isolate | Rhizosphere |
| 162 | 8055419101 | Flavobacterium tyrosinilyticum KCTC 42726 | Isolate | Rhizosphere |
| 163 | 8055592153 | Flavobacterium panacis DCY106 | Isolate | Rhizosphere |
| 164 | 8056440228 | Flavobacterium hibisci THG-HG1.4 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 89.73 |
| Metatranscriptomes | 0.45 |
| Isolates | 9.82 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.02 |
| Nodule | 1.34 |
| Rhizoplane | 0.45 |
| Rhizosphere | 79.46 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 4.02 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0451855_0788525 | 3300041511 | Bacteria | 1569 |
| 2 | JGI25157J39369_1003796 | 3300002741 | Bacteria | 2956 |
| 3 | rootH1_10106301 | 3300003316 | Bacteria | 2862 |
| 4 | rootH1_10146516 | 3300003316 | Bacteria | 1201 |
| 5 | rootH2_10006212 | 3300003320 | Bacteria | 46037 |
| 6 | rootH2_10038796 | 3300003320 | Bacteria | 37745 |
| 7 | rootH2_10201382 | 3300003320 | Bacteria | 1674 |
| 8 | rootL2_10075085 | 3300003322 | Bacteria | 5902 |
| 9 | rootL2_10174455 | 3300003322 | Bacteria | 3324 |
| 10 | rootL2_10376098 | 3300003322 | Bacteria | 1637 |
| 11 | rootH1_10029598 | 3300003323 | Bacteria | 5175 |
| 12 | rootH1_10059311 | 3300003323 | Bacteria | 8910 |
| 13 | Ga0006562J51391_1003654 | 3300003578 | Bacteria | 1790 |
| 14 | Ga0065165_1000703 | 3300005262 | Bacteria | 47554 |
| 15 | Ga0065714_10005508 | 3300005288 | Bacteria | 6074 |
| 16 | Ga0065714_10015205 | 3300005288 | Bacteria | 1592 |
| 17 | Ga0070676_10002951 | 3300005328 | Bacteria | 8785 |
| 18 | Ga0070683_100144411 | 3300005329 | Bacteria | 2254 |
| 19 | Ga0068868_100040835 | 3300005338 | Bacteria | 3612 |
| 20 | Ga0070675_100071656 | 3300005354 | Bacteria | 2875 |
| 21 | Ga0070667_100251140 | 3300005367 | Bacteria | 1581 |
| 22 | Ga0070678_100005186 | 3300005456 | Bacteria | 7493 |
| 23 | Ga0070662_100096226 | 3300005457 | Bacteria | 2233 |
| 24 | Ga0068867_100000358 | 3300005459 | Bacteria | 30357 |
| 25 | Ga0070684_100120783 | 3300005535 | Bacteria | 2357 |
| 26 | Ga0068853_100000201 | 3300005539 | Bacteria | 41960 |
| 27 | Ga0068853_100009742 | 3300005539 | Bacteria | 7751 |
| 28 | Ga0068853_100076564 | 3300005539 | Bacteria | 2921 |
| 29 | Ga0070672_100038003 | 3300005543 | Bacteria | 3676 |
| 30 | Ga0070693_100041973 | 3300005547 | Bacteria | 2576 |
| 31 | Ga0070665_100003871 | 3300005548 | Bacteria | 15835 |
| 32 | Ga0068856_100039411 | 3300005614 | Bacteria | 4639 |
| 33 | Ga0068852_100019863 | 3300005616 | Bacteria | 5329 |
| 34 | Ga0068852_100192605 | 3300005616 | Bacteria | 1925 |
| 35 | Ga0068866_10018806 | 3300005718 | Bacteria | 3132 |
| 36 | Ga0068851_10000074 | 3300005834 | Bacteria | 56589 |
| 37 | Ga0075366_10000063 | 3300006195 | Bacteria | 39802 |
| 38 | Ga0097621_100001851 | 3300006237 | Bacteria | 14506 |
| 39 | Ga0075428_100162166 | 3300006844 | Bacteria | 2427 |
| 40 | Ga0068865_100002546 | 3300006881 | Bacteria | 10807 |
| 41 | Ga0099824_1000804 | 3300006942 | Bacteria | 40970 |
| 42 | Ga0099826_10000723 | 3300006948 | Bacteria | 17327 |
| 43 | Ga0105240_10000104 | 3300009093 | Bacteria | 172082 |
| 44 | Ga0105240_10001801 | 3300009093 | Bacteria | 36072 |
| 45 | Ga0105240_10003107 | 3300009093 | Bacteria | 26115 |
| 46 | Ga0105240_10008767 | 3300009093 | Bacteria | 14413 |
| 47 | Ga0105240_10010348 | 3300009093 | Bacteria | 13122 |
| 48 | Ga0105245_10227266 | 3300009098 | Bacteria | 1803 |
| 49 | Ga0105243_10156278 | 3300009148 | Bacteria | 1961 |
| 50 | Ga0105241_10002563 | 3300009174 | Bacteria | 13643 |
| 51 | Ga0105241_10041025 | 3300009174 | Bacteria | 3495 |
| 52 | Ga0105241_10124246 | 3300009174 | Bacteria | 2082 |
| 53 | Ga0105242_10023256 | 3300009176 | Bacteria | 4886 |
| 54 | Ga0105237_10001254 | 3300009545 | Bacteria | 33897 |
| 55 | Ga0105237_10005483 | 3300009545 | Bacteria | 14300 |
| 56 | Ga0105237_10007911 | 3300009545 | Bacteria | 11584 |
| 57 | Ga0105237_10154695 | 3300009545 | Unclassified | 2290 |
| 58 | Ga0105238_10001485 | 3300009551 | Bacteria | 23555 |
| 59 | Ga0105238_10022813 | 3300009551 | Bacteria | 6379 |
| 60 | Ga0105238_10270528 | 3300009551 | Bacteria | 1680 |
| 61 | Ga0105249_10198363 | 3300009553 | Bacteria | 1963 |
| 62 | Ga0105239_10000864 | 3300010375 | Bacteria | 43048 |
| 63 | Ga0105239_10006334 | 3300010375 | Bacteria | 13761 |
| 64 | Ga0105239_10043764 | 3300010375 | Bacteria | 4909 |
| 65 | Ga0105239_10342371 | 3300010375 | Bacteria | 1688 |
| 66 | Ga0105246_10121964 | 3300011119 | Bacteria | 1933 |
| 67 | Ga0157373_10000007 | 3300013100 | Bacteria | 216734 |
| 68 | Ga0157373_10000129 | 3300013100 | Bacteria | 59252 |
| 69 | Ga0157373_10063397 | 3300013100 | Bacteria | 2617 |
| 70 | Ga0157371_10054048 | 3300013102 | Bacteria | 2852 |
| 71 | Ga0157371_10060364 | 3300013102 | Bacteria | 2689 |
| 72 | Ga0157370_10001177 | 3300013104 | Bacteria | 32660 |
| 73 | Ga0157369_10006413 | 3300013105 | Bacteria | 13638 |
| 74 | Ga0157374_10000002 | 3300013296 | Bacteria | 1054226 |
| 75 | Ga0157374_10001179 | 3300013296 | Bacteria | 22309 |
| 76 | Ga0157374_10008415 | 3300013296 | Bacteria | 8815 |
| 77 | Ga0163162_10002815 | 3300013306 | Bacteria | 16545 |
| 78 | Ga0157372_10002967 | 3300013307 | Bacteria | 18279 |
| 79 | Ga0157372_10007970 | 3300013307 | Bacteria | 11265 |
| 80 | Ga0157372_10076379 | 3300013307 | Bacteria | 3782 |
| 81 | Ga0157375_10043145 | 3300013308 | Bacteria | 4372 |
| 82 | Ga0157375_10077798 | 3300013308 | Bacteria | 3348 |
| 83 | Ga0157380_10000432 | 3300014326 | Bacteria | 25469 |
| 84 | Ga0157380_10046413 | 3300014326 | Bacteria | 3412 |
| 85 | Ga0157377_10010068 | 3300014745 | Bacteria | 4667 |
| 86 | Ga0157377_10142027 | 3300014745 | Bacteria | 1476 |
| 87 | Ga0157376_10094378 | 3300014969 | Bacteria | 2599 |
| 88 | Ga0157376_10410735 | 3300014969 | Unclassified | 1311 |
| 89 | Ga0182006_1002472 | 3300015261 | Bacteria | 10082 |
| 90 | Ga0213872_10003179 | 3300021361 | Bacteria | 9212 |
| 91 | Ga0209026_1000273 | 3300025250 | Bacteria | 61449 |
| 92 | Ga0209050_1003104 | 3300025298 | Bacteria | 12729 |
| 93 | Ga0207656_10000049 | 3300025321 | Bacteria | 46520 |
| 94 | Ga0207655_1000038 | 3300025728 | Bacteria | 348340 |
| 95 | Ga0207642_10006872 | 3300025899 | Bacteria | 3810 |
| 96 | Ga0207647_10000303 | 3300025904 | Bacteria | 40536 |
| 97 | Ga0207645_10000035 | 3300025907 | Bacteria | 89345 |
| 98 | Ga0207654_10005392 | 3300025911 | Bacteria | 6466 |
| 99 | Ga0207654_10008098 | 3300025911 | Bacteria | 5299 |
| 100 | Ga0207654_10047245 | 3300025911 | Bacteria | 2459 |
| 101 | Ga0207695_10000048 | 3300025913 | Bacteria | 421800 |
| 102 | Ga0207695_10000486 | 3300025913 | Bacteria | 84856 |
| 103 | Ga0207695_10000681 | 3300025913 | Bacteria | 66668 |
| 104 | Ga0207695_10011172 | 3300025913 | Bacteria | 10893 |
| 105 | Ga0207695_10014673 | 3300025913 | Bacteria | 9264 |
| 106 | Ga0207695_10023186 | 3300025913 | Bacteria | 7022 |
| 107 | Ga0207671_10019842 | 3300025914 | Bacteria | 5130 |
| 108 | Ga0207694_10095394 | 3300025924 | Bacteria | 2351 |
| 109 | Ga0207644_10003502 | 3300025931 | Bacteria | 10158 |
| 110 | Ga0207706_10001241 | 3300025933 | Bacteria | 25697 |
| 111 | Ga0207706_10194038 | 3300025933 | Bacteria | 1782 |
| 112 | Ga0207709_10152587 | 3300025935 | Bacteria | 1602 |
| 113 | Ga0207704_10000036 | 3300025938 | Bacteria | 94574 |
| 114 | Ga0207667_10011233 | 3300025949 | Bacteria | 10420 |
| 115 | Ga0207658_10038824 | 3300025986 | Bacteria | 3433 |
| 116 | Ga0207677_10154797 | 3300026023 | Bacteria | 1773 |
| 117 | Ga0207639_10049921 | 3300026041 | Bacteria | 3175 |
| 118 | Ga0207678_10033223 | 3300026067 | Bacteria | 4495 |
| 119 | Ga0207702_10028982 | 3300026078 | Bacteria | 4603 |
| 120 | Ga0207648_10000333 | 3300026089 | Bacteria | 51656 |
| 121 | Ga0207674_10031606 | 3300026116 | Bacteria | 5559 |
| 122 | Ga0207683_10007948 | 3300026121 | Bacteria | 9075 |
| 123 | Ga0207698_10079143 | 3300026142 | Bacteria | 2643 |
| 124 | Ga0209489_110369 | 3300027361 | Bacteria | 10572 |
| 125 | Ga0268266_10004805 | 3300028379 | Bacteria | 12830 |
| 126 | Ga0265318_10045529 | 3300028577 | Bacteria | 1658 |
| 127 | Ga0307517_10086304 | 3300028786 | Bacteria | 2620 |
| 128 | Ga0307515_10001632 | 3300028794 | Bacteria | 49830 |
| 129 | Ga0307515_10008220 | 3300028794 | Bacteria | 20411 |
| 130 | Ga0307515_10037889 | 3300028794 | Bacteria | 7733 |
| 131 | Ga0265316_10000551 | 3300031344 | Bacteria | 42160 |
| 132 | Ga0307509_10074373 | 3300031507 | Bacteria | 3534 |
| 133 | Ga0307408_100000835 | 3300031548 | Bacteria | 24429 |
| 134 | Ga0307405_10007843 | 3300031731 | Bacteria | 5374 |
| 135 | Ga0307410_10001144 | 3300031852 | Bacteria | 11650 |
| 136 | Ga0307406_10000020 | 3300031901 | Bacteria | 98526 |
| 137 | Ga0307412_10101632 | 3300031911 | Bacteria | 2034 |
| 138 | Ga0307416_100001944 | 3300032002 | Bacteria | 11564 |
| 139 | Ga0307414_10000011 | 3300032004 | Bacteria | 338253 |
| 140 | Ga0307507_10006182 | 3300033179 | Bacteria | 18677 |
| 141 | Ga0307510_10007382 | 3300033180 | Bacteria | 13105 |
| 142 | Ga0395899_0000001 | 3300037312 | Bacteria | 1750322 |
| 143 | Ga0395899_0000499 | 3300037312 | Bacteria | 43572 |
| 144 | Ga0395900_0000346 | 3300037418 | Bacteria | 68020 |
| 145 | Ga0395898_0007051 | 3300037466 | Bacteria | 11941 |
| 146 | Ga0395905_0000528 | 3300037471 | Bacteria | 52404 |
| 147 | Ga0395901_0000351 | 3300038443 | Bacteria | 56004 |
| 148 | Ga0400483_212291 | 3300039062 | Bacteria | 3949 |
| 149 | Ga0436361_0296969 | 3300039447 | Bacteria | 18871 |
| 150 | Ga0439466_0014835 | 3300041411 | Bacteria | 2833 |
| 151 | Ga0451807_1807036 | 3300041486 | Bacteria | 1325 |
| 152 | Ga0451855_1757125 | 3300041511 | Bacteria | 2242 |
| 153 | Ga0439455_0002865 | 3300042012 | Bacteria | 3214 |
| 154 | Ga0451577_0000279 | 3300042876 | Bacteria | 99236 |
| 155 | Ga0451577_0019527 | 3300042876 | Bacteria | 6231 |
| 156 | Ga0453683_0000031 | 3300044673 | Bacteria | 241998 |
| 157 | Ga0453683_0030077 | 3300044673 | Bacteria | 3434 |
| 158 | Ga0453683_0042994 | 3300044673 | Bacteria | 2836 |
| 159 | Ga0453683_0148979 | 3300044673 | Bacteria | 1478 |
| 160 | Ga0466961_0034756 | 3300044693 | Bacteria | 3236 |
| 161 | Ga0453684_0000929 | 3300044712 | Bacteria | 96874 |
| 162 | Ga0453684_0003617 | 3300044712 | Bacteria | 34455 |
| 163 | Ga0453684_0186516 | 3300044712 | Unclassified | 2430 |
| 164 | Ga0466959_0001334 | 3300045049 | Bacteria | 15018 |
| 165 | Ga0451576_0000414 | 3300045051 | Bacteria | 99196 |
| 166 | Ga0451576_0031844 | 3300045051 | Bacteria | 5620 |
| 167 | Ga0451576_0101504 | 3300045051 | Bacteria | 2992 |
| 168 | Ga0451576_0126965 | 3300045051 | Bacteria | 2658 |
| 169 | Ga0451576_0711887 | 3300045051 | Bacteria | 1055 |
| 170 | Ga0495592_0069201 | 3300046454 | Unclassified | 2574 |
| 171 | Ga0495629_0190872 | 3300046459 | Bacteria | 1418 |
| 172 | Ga0495638_0000026 | 3300046460 | Bacteria | 347061 |
| 173 | Ga0495585_0000302 | 3300046492 | Bacteria | 49282 |
| 174 | Ga0495585_0000588 | 3300046492 | Bacteria | 34090 |
| 175 | Ga0495583_0037369 | 3300046506 | Bacteria | 2302 |
| 176 | Ga0495631_0003239 | 3300046518 | Bacteria | 8947 |
| 177 | Ga0495637_0052996 | 3300046520 | Bacteria | 1691 |
| 178 | Ga0495648_0033446 | 3300046524 | Bacteria | 3356 |
| 179 | Ga0495609_0003030 | 3300046538 | Bacteria | 9894 |
| 180 | Ga0495668_0000021 | 3300046616 | Bacteria | 381308 |
| 181 | Ga0495634_0041786 | 3300046642 | Unclassified | 3113 |
| 182 | Ga0495625_0010588 | 3300046660 | Bacteria | 7613 |
| 183 | Ga0495625_0176749 | 3300046660 | Unclassified | 1422 |
| 184 | Ga0495687_000793 | 3300047443 | Bacteria | 33985 |
| 185 | Ga0495687_001121 | 3300047443 | Bacteria | 26035 |
| 186 | Ga0495684_0282894 | 3300047471 | Unclassified | 1196 |
| 187 | Ga0495686_0129265 | 3300047472 | Bacteria | 1499 |
| 188 | Ga0495614_0020418 | 3300048089 | Bacteria | 2865 |
| 189 | Ga0496124_0135062 | 3300048927 | Bacteria | 1954 |
| 190 | Ga0501300_004864 | 3300049523 | Unclassified | 1985 |
| 191 | Ga0501034_0080935 | 3300049571 | Unclassified | 3251 |
| 192 | Ga0501238_000361 | 3300049671 | Bacteria | 5715 |
| 193 | Ga0501269_004139 | 3300049766 | Bacteria | 1746 |
| 194 | Ga0501280_001092 | 3300049776 | Bacteria | 5464 |
| 195 | nmdc:mga08y16_5792_c1 | 3300050511 | Bacteria | 12945 |
| 196 | Ga0500646_0003182 | 3300053090 | Bacteria | 4211 |
| 197 | Ga0500641_0000010 | 3300053096 | Bacteria | 171383 |
| 198 | Ga0500608_000214 | 3300053122 | Bacteria | 23145 |
| 199 | Ga0500614_021700 | 3300053123 | Bacteria | 1492 |
| 200 | Ga0500616_0000004 | 3300053153 | Bacteria | 1002714 |
| 201 | Ga0500584_019249 | 3300053726 | Bacteria | 3165 |
| 202 | Ga0466962_0022011 | 3300061719 | Bacteria | 3062 |
| 203 | 2520879685 | 2519899754 | Bacteria | 5336938 |
| 204 | 2644374088 | 2643221667 | Bacteria | 5627472 |
| 205 | 2644643786 | 2643221716 | Bacteria | 4986332 |
| 206 | 2644681679 | 2643221725 | Bacteria | 5087956 |
| 207 | 2740032753 | 2739367866 | Bacteria | 4215900 |
| 208 | 2802654694 | 2802428842 | Bacteria | 4926114 |
| 209 | 2817413384 | 2816332280 | Bacteria | 5109718 |
| 210 | 2833640916 | 2833640130 | Bacteria | 4858325 |
| 211 | 2857617203 | 2857613821 | Bacteria | 4917088 |
| 212 | 2881360186 | 2881359912 | Bacteria | 4935907 |
| 213 | 2896320319 | 2896317667 | Bacteria | 4606601 |
| 214 | 2898714625 | 2898713307 | Bacteria | 4110805 |
| 215 | 2904423152 | 2904419702 | Bacteria | 5166287 |
| 216 | 2904558656 | 2904555929 | Bacteria | 5218588 |
| 217 | 2919194380 | 2919191525 | Bacteria | 5765973 |
| 218 | 2929150460 | 2929150217 | Bacteria | 5462483 |
| 219 | 2958463116 | 2958458903 | Bacteria | 5301041 |
| 220 | 2977271920 | 2977268062 | Bacteria | 5243061 |
| 221 | 8054311581 | 8054307821 | Bacteria | 5212224 |
| 222 | 8055423415 | 8055419101 | Bacteria | 5289643 |
| 223 | 8055595221 | 8055592153 | Bacteria | 5961247 |
| 224 | 8056443362 | 8056440228 | Bacteria | 4946504 |
| 225 | Ga0451855_0788525 | |||
| 226 | JGI25157J39369_1003796 | |||
| 227 | rootH1_10106301 | |||
| 228 | rootH1_10146516 | |||
| 229 | rootH2_10006212 | |||
| 230 | rootH2_10038796 | |||
| 231 | rootH2_10201382 | |||
| 232 | rootL2_10075085 | |||
| 233 | rootL2_10174455 | |||
| 234 | rootL2_10376098 | |||
| 235 | rootH1_10029598 | |||
| 236 | rootH1_10059311 | |||
| 237 | Ga0006562J51391_1003654 | |||
| 238 | Ga0065165_1000703 | |||
| 239 | Ga0065714_10005508 | |||
| 240 | Ga0065714_10015205 | |||
| 241 | Ga0070676_10002951 | |||
| 242 | Ga0070683_100144411 | |||
| 243 | Ga0068868_100040835 | |||
| 244 | Ga0070675_100071656 | |||
| 245 | Ga0070667_100251140 | |||
| 246 | Ga0070678_100005186 | |||
| 247 | Ga0070662_100096226 | |||
| 248 | Ga0068867_100000358 | |||
| 249 | Ga0070684_100120783 | |||
| 250 | Ga0068853_100000201 | |||
| 251 | Ga0068853_100009742 | |||
| 252 | Ga0068853_100076564 | |||
| 253 | Ga0070672_100038003 | |||
| 254 | Ga0070693_100041973 | |||
| 255 | Ga0070665_100003871 | |||
| 256 | Ga0068856_100039411 | |||
| 257 | Ga0068852_100019863 | |||
| 258 | Ga0068852_100192605 | |||
| 259 | Ga0068866_10018806 | |||
| 260 | Ga0068851_10000074 | |||
| 261 | Ga0075366_10000063 | |||
| 262 | Ga0097621_100001851 | |||
| 263 | Ga0075428_100162166 | |||
| 264 | Ga0068865_100002546 | |||
| 265 | Ga0099824_1000804 | |||
| 266 | Ga0099826_10000723 | |||
| 267 | Ga0105240_10000104 | |||
| 268 | Ga0105240_10001801 | |||
| 269 | Ga0105240_10003107 | |||
| 270 | Ga0105240_10008767 | |||
| 271 | Ga0105240_10010348 | |||
| 272 | Ga0105245_10227266 | |||
| 273 | Ga0105243_10156278 | |||
| 274 | Ga0105241_10002563 | |||
| 275 | Ga0105241_10041025 | |||
| 276 | Ga0105241_10124246 | |||
| 277 | Ga0105242_10023256 | |||
| 278 | Ga0105237_10001254 | |||
| 279 | Ga0105237_10005483 | |||
| 280 | Ga0105237_10007911 | |||
| 281 | Ga0105237_10154695 | |||
| 282 | Ga0105238_10001485 | |||
| 283 | Ga0105238_10022813 | |||
| 284 | Ga0105238_10270528 | |||
| 285 | Ga0105249_10198363 | |||
| 286 | Ga0105239_10000864 | |||
| 287 | Ga0105239_10006334 | |||
| 288 | Ga0105239_10043764 | |||
| 289 | Ga0105239_10342371 | |||
| 290 | Ga0105246_10121964 | |||
| 291 | Ga0157373_10000007 | |||
| 292 | Ga0157373_10000129 | |||
| 293 | Ga0157373_10063397 | |||
| 294 | Ga0157371_10054048 | |||
| 295 | Ga0157371_10060364 | |||
| 296 | Ga0157370_10001177 | |||
| 297 | Ga0157369_10006413 | |||
| 298 | Ga0157374_10000002 | |||
| 299 | Ga0157374_10001179 | |||
| 300 | Ga0157374_10008415 | |||
| 301 | Ga0163162_10002815 | |||
| 302 | Ga0157372_10002967 | |||
| 303 | Ga0157372_10007970 | |||
| 304 | Ga0157372_10076379 | |||
| 305 | Ga0157375_10043145 | |||
| 306 | Ga0157375_10077798 | |||
| 307 | Ga0157380_10000432 | |||
| 308 | Ga0157380_10046413 | |||
| 309 | Ga0157377_10010068 | |||
| 310 | Ga0157377_10142027 | |||
| 311 | Ga0157376_10094378 | |||
| 312 | Ga0157376_10410735 | |||
| 313 | Ga0182006_1002472 | |||
| 314 | Ga0213872_10003179 | |||
| 315 | Ga0209026_1000273 | |||
| 316 | Ga0209050_1003104 | |||
| 317 | Ga0207656_10000049 | |||
| 318 | Ga0207655_1000038 | |||
| 319 | Ga0207642_10006872 | |||
| 320 | Ga0207647_10000303 | |||
| 321 | Ga0207645_10000035 | |||
| 322 | Ga0207654_10005392 | |||
| 323 | Ga0207654_10008098 | |||
| 324 | Ga0207654_10047245 | |||
| 325 | Ga0207695_10000048 | |||
| 326 | Ga0207695_10000486 | |||
| 327 | Ga0207695_10000681 | |||
| 328 | Ga0207695_10011172 | |||
| 329 | Ga0207695_10014673 | |||
| 330 | Ga0207695_10023186 | |||
| 331 | Ga0207671_10019842 | |||
| 332 | Ga0207694_10095394 | |||
| 333 | Ga0207644_10003502 | |||
| 334 | Ga0207706_10001241 | |||
| 335 | Ga0207706_10194038 | |||
| 336 | Ga0207709_10152587 | |||
| 337 | Ga0207704_10000036 | |||
| 338 | Ga0207667_10011233 | |||
| 339 | Ga0207658_10038824 | |||
| 340 | Ga0207677_10154797 | |||
| 341 | Ga0207639_10049921 | |||
| 342 | Ga0207678_10033223 | |||
| 343 | Ga0207702_10028982 | |||
| 344 | Ga0207648_10000333 | |||
| 345 | Ga0207674_10031606 | |||
| 346 | Ga0207683_10007948 | |||
| 347 | Ga0207698_10079143 | |||
| 348 | Ga0209489_110369 | |||
| 349 | Ga0268266_10004805 | |||
| 350 | Ga0265318_10045529 | |||
| 351 | Ga0307517_10086304 | |||
| 352 | Ga0307515_10001632 | |||
| 353 | Ga0307515_10008220 | |||
| 354 | Ga0307515_10037889 | |||
| 355 | Ga0265316_10000551 | |||
| 356 | Ga0307509_10074373 | |||
| 357 | Ga0307408_100000835 | |||
| 358 | Ga0307405_10007843 | |||
| 359 | Ga0307410_10001144 | |||
| 360 | Ga0307406_10000020 | |||
| 361 | Ga0307412_10101632 | |||
| 362 | Ga0307416_100001944 | |||
| 363 | Ga0307414_10000011 | |||
| 364 | Ga0307507_10006182 | |||
| 365 | Ga0307510_10007382 | |||
| 366 | Ga0395899_0000001 | |||
| 367 | Ga0395899_0000499 | |||
| 368 | Ga0395900_0000346 | |||
| 369 | Ga0395898_0007051 | |||
| 370 | Ga0395905_0000528 | |||
| 371 | Ga0395901_0000351 | |||
| 372 | Ga0400483_212291 | |||
| 373 | Ga0436361_0296969 | |||
| 374 | Ga0439466_0014835 | |||
| 375 | Ga0451807_1807036 | |||
| 376 | Ga0451855_1757125 | |||
| 377 | Ga0439455_0002865 | |||
| 378 | Ga0451577_0000279 | |||
| 379 | Ga0451577_0019527 | |||
| 380 | Ga0453683_0000031 | |||
| 381 | Ga0453683_0030077 | |||
| 382 | Ga0453683_0042994 | |||
| 383 | Ga0453683_0148979 | |||
| 384 | Ga0466961_0034756 | |||
| 385 | Ga0453684_0000929 | |||
| 386 | Ga0453684_0003617 | |||
| 387 | Ga0453684_0186516 | |||
| 388 | Ga0466959_0001334 | |||
| 389 | Ga0451576_0000414 | |||
| 390 | Ga0451576_0031844 | |||
| 391 | Ga0451576_0101504 | |||
| 392 | Ga0451576_0126965 | |||
| 393 | Ga0451576_0711887 | |||
| 394 | Ga0495592_0069201 | |||
| 395 | Ga0495629_0190872 | |||
| 396 | Ga0495638_0000026 | |||
| 397 | Ga0495585_0000302 | |||
| 398 | Ga0495585_0000588 | |||
| 399 | Ga0495583_0037369 | |||
| 400 | Ga0495631_0003239 | |||
| 401 | Ga0495637_0052996 | |||
| 402 | Ga0495648_0033446 | |||
| 403 | Ga0495609_0003030 | |||
| 404 | Ga0495668_0000021 | |||
| 405 | Ga0495634_0041786 | |||
| 406 | Ga0495625_0010588 | |||
| 407 | Ga0495625_0176749 | |||
| 408 | Ga0495687_000793 | |||
| 409 | Ga0495687_001121 | |||
| 410 | Ga0495684_0282894 | |||
| 411 | Ga0495686_0129265 | |||
| 412 | Ga0495614_0020418 | |||
| 413 | Ga0496124_0135062 | |||
| 414 | Ga0501300_004864 | |||
| 415 | Ga0501034_0080935 | |||
| 416 | Ga0501238_000361 | |||
| 417 | Ga0501269_004139 | |||
| 418 | Ga0501280_001092 | |||
| 419 | nmdc:mga08y16_5792_c1 | |||
| 420 | Ga0500646_0003182 | |||
| 421 | Ga0500641_0000010 | |||
| 422 | Ga0500608_000214 | |||
| 423 | Ga0500614_021700 | |||
| 424 | Ga0500616_0000004 | |||
| 425 | Ga0500584_019249 | |||
| 426 | Ga0466962_0022011 | |||
| 427 | 2520879685 | |||
| 428 | 2644374088 | |||
| 429 | 2644643786 | |||
| 430 | 2644681679 | |||
| 431 | 2740032753 | |||
| 432 | 2802654694 | |||
| 433 | 2817413384 | |||
| 434 | 2833640916 | |||
| 435 | 2857617203 | |||
| 436 | 2881360186 | |||
| 437 | 2896320319 | |||
| 438 | 2898714625 | |||
| 439 | 2904423152 | |||
| 440 | 2904558656 | |||
| 441 | 2919194380 | |||
| 442 | 2929150460 | |||
| 443 | 2958463116 | |||
| 444 | 2977271920 | |||
| 445 | 8054311581 | |||
| 446 | 8055423415 | |||
| 447 | 8055595221 | |||
| 448 | 8056443362 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4itm-assembly1.cif.gz_A | "crystal structure of ""apo"" form lpxk from aquifex aeolicus in complex with atp at 2.2 angstrom resolution" | 0.8187 | 5 | 344 |
| 4itm-assembly1.cif.gz_A | "crystal structure of ""apo"" form lpxk from aquifex aeolicus in complex with atp at 2.2 angstrom resolution" | 0.8115 | 5 | 344 |
| 3clh-assembly1.cif.gz_B | crystal structure of 3-dehydroquinate synthase (dhqs)from helicobacter pylori | 0.6512 | 238 | 298 |
| 4r0m-assembly2.cif.gz_A | structure of mcyg a-pcp complexed with phenylalanyl-adenylate | 0.6489 | 234 | 322 |
| 3rg8-assembly1.cif.gz_G | crystal structure of treponema denticola pure | 0.6397 | 238 | 299 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P27300_12_322_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8473 | 6 | 340 | 3.40.50.300 |
| af_P27300_12_322_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8396 | 6 | 340 | 3.40.50.300 |
| af_I1KYA1_28_391_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8339 | 9 | 344 | 3.40.50.300 |
| af_I1KYA1_28_391_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.7919 | 9 | 344 | 3.40.50.300 |
| af_A0A1D6KF80_27_384_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.791 | 17 | 347 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-H1Y306-F1-model_v4 | Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase) | 0.9924 | 3 | 345 |
GO:0005524
GO:0005886 GO:0009029 GO:0009244 GO:0009245 |
| AF-A0A4Q5QV91-F1-model_v4 | Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) | 0.9812 | 1 | 181 |
GO:0005524
GO:0005886 GO:0009029 GO:0009244 GO:0009245 |
| AF-H1Y306-F1-model_v4 | Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase) | 0.981 | 3 | 345 |
GO:0005524
GO:0005886 GO:0009029 GO:0009244 GO:0009245 |
| AF-A0A7W1PUE9-F1-model_v4 | Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase) | 0.9768 | 6 | 346 |
GO:0005524
GO:0005886 GO:0009029 GO:0009244 GO:0009245 |
| AF-A0A0S8JU20-F1-model_v4 | Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) | 0.9763 | 5 | 202 |
GO:0005524
GO:0005886 GO:0009029 GO:0009244 GO:0009245 |