F337264

General Info

Members Datasets Scaffolds Average Seq Length
224 184 448 398

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2842694124|2842696855
Length 431
Sequence ARLDDVAWLTAPPLGEVLAALDRDGEEARIAGGSVRDAWLGLPRGDVDIATTALPAETMRRARAAGWKAVPTGLDHGTVTVVAKGRPFEVTTLRRDVGTDGRRAVVAFTRDWAEDAQRRDLTMNGLYLDRSGRIHDSVGGLDDLLAGRVRFIGDPRERIREDYLRILRFFRFHARFGRGPIDAAGLAAAIAERAGLATLSRERVRAELLKLLVAPGAGETLRAMAETGLLGLLLGGVPRLVRLKRLAELDGEGDAILRLAGLAHVVAEDGERLQRRLRLTNAEAKRLAAIGDARPSLTPEIGEAAAKVALYRLGRRAFEDRARLAWADVGAASNDAAWTALIALPERWSVPKPPFAAGDLIARGVAPGPALGHALRAVEEAWIGAGFPVGKAAEALMDAAARWHAGGPSGSPASPWSGFTAPSISDVKLDK

Samples

Sample ID Description Type Environment
1 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
46 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
47 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
51 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
52 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
53 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
54 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
72 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
73 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
74 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
75 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
76 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
77 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
78 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
79 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
80 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
81 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
82 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
83 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
84 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
85 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
88 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
89 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
90 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
91 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
92 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
93 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
94 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
95 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
96 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
97 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
98 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
99 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
100 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
101 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
102 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
103 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
104 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
105 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
106 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
107 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
108 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
109 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
110 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
111 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
112 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
113 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
114 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
115 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
116 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
117 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
118 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
119 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
120 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
121 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
122 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
123 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
124 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
125 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
126 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
127 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
130 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
131 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
132 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
137 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
138 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
139 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
140 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
149 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
150 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
151 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
152 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
153 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
154 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
155 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
156 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
157 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
158 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
159 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
160 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
161 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
162 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
163 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
164 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
165 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
166 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
167 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
168 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
169 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
170 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
171 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
172 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
173 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
174 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
175 2842694124 Methylopila sp. R-72369 Isolate Unclassified
176 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
177 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
178 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
179 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
180 2909042592 Labrys sp. LIt4 Isolate Nodule
181 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
182 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
183 3000017691 Rhodobacteraceae bacterium GH2-2 Isolate Rhizosphere
184 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.54
Metatranscriptomes 0
Isolates 4.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.27
Nodule 1.34
Rhizoplane 1.79
Rhizosphere 79.02
Stem 0
Stem Tuber 0
Unclassified 0.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000984 3300003187 Bacteria 21612
2 JGI25160J50197_1004159 3300003354 Bacteria 6299
3 Ga0070666_10127353 3300005335 Bacteria 1768
4 Ga0070680_100081104 3300005336 Bacteria 2677
5 Ga0070680_100100882 3300005336 Bacteria 2396
6 Ga0070682_100089857 3300005337 Bacteria 2007
7 Ga0070659_100110842 3300005366 Bacteria 2215
8 Ga0070709_10000738 3300005434 Bacteria 18492
9 Ga0070714_100004606 3300005435 Bacteria 10396
10 Ga0070713_100017576 3300005436 Bacteria 5412
11 Ga0070713_100026156 3300005436 Bacteria 4576
12 Ga0070713_100031885 3300005436 Bacteria 4202
13 Ga0070710_10021794 3300005437 Bacteria 3344
14 Ga0070711_100069924 3300005439 Bacteria 2470
15 Ga0070705_100027360 3300005440 Bacteria 3113
16 Ga0070679_100055086 3300005530 Bacteria 3960
17 Ga0070679_100222214 3300005530 Bacteria 1850
18 Ga0070697_100000639 3300005536 Bacteria 26542
19 Ga0068853_100001683 3300005539 Bacteria 16187
20 Ga0070695_100005063 3300005545 Bacteria 7764
21 Ga0070696_100009200 3300005546 Bacteria 6612
22 Ga0070693_100012571 3300005547 Bacteria 4286
23 Ga0070704_100007997 3300005549 Bacteria 6315
24 Ga0068855_100033118 3300005563 Bacteria 6169
25 Ga0068854_100081735 3300005578 Bacteria 2387
26 Ga0081455_10013815 3300005937 Bacteria 7946
27 Ga0070717_10000485 3300006028 Bacteria 25249
28 Ga0075365_10018075 3300006038 Bacteria 4327
29 Ga0075365_10062981 3300006038 Bacteria 2482
30 Ga0075364_10039468 3300006051 Bacteria 3060
31 Ga0070715_10001137 3300006163 Bacteria 7597
32 Ga0070712_100019724 3300006175 Bacteria 4402
33 Ga0075362_10022945 3300006177 Bacteria 2634
34 Ga0075367_10004655 3300006178 Bacteria 6727
35 Ga0075370_10042196 3300006353 Bacteria 2577
36 Ga0075428_100005241 3300006844 Bacteria 14417
37 Ga0075428_100168718 3300006844 Bacteria 2374
38 Ga0075430_100010396 3300006846 Bacteria 7882
39 Ga0075430_100032927 3300006846 Bacteria 4399
40 Ga0075431_100000105 3300006847 Bacteria 53256
41 Ga0075434_100031153 3300006871 Bacteria 5256
42 Ga0075429_100005372 3300006880 Bacteria 11021
43 Ga0075436_100091542 3300006914 Bacteria 2114
44 Ga0075435_100075222 3300007076 Bacteria 2765
45 Ga0105240_10105287 3300009093 Bacteria 3425
46 Ga0111539_10000792 3300009094 Bacteria 41176
47 Ga0111539_10108856 3300009094 Bacteria 3252
48 Ga0114129_10003927 3300009147 Bacteria 20989
49 Ga0114129_10090927 3300009147 Bacteria 4230
50 Ga0114129_10527465 3300009147 Bacteria 1539
51 Ga0105243_10184939 3300009148 Bacteria 1815
52 Ga0105241_10029838 3300009174 Bacteria 4071
53 Ga0105238_10078003 3300009551 Bacteria 3303
54 Ga0105249_10001791 3300009553 Bacteria 18701
55 Ga0157373_10079829 3300013100 Bacteria 2307
56 Ga0157370_10021721 3300013104 Bacteria 6393
57 Ga0171462_1006 3300013250 Bacteria 432986
58 Ga0157374_10225290 3300013296 Bacteria 1841
59 Ga0157372_10109154 3300013307 Bacteria 3168
60 Ga0213876_10001467 3300021384 Bacteria 14688
61 Ga0213876_10017275 3300021384 Bacteria 3809
62 Ga0213876_10031247 3300021384 Bacteria 2810
63 Ga0209130_1001260 3300025284 Bacteria 17661
64 Ga0209025_1001732 3300025294 Bacteria 26312
65 Ga0209025_1055912 3300025294 Bacteria 1522
66 Ga0209758_1002257 3300025297 Bacteria 19987
67 Ga0207426_1000088 3300025302 Bacteria 287526
68 Ga0207692_10000282 3300025898 Bacteria 17493
69 Ga0207688_10035658 3300025901 Bacteria 2756
70 Ga0207654_10094722 3300025911 Bacteria 1828
71 Ga0207707_10004788 3300025912 Bacteria 11871
72 Ga0207693_10016176 3300025915 Bacteria 5966
73 Ga0207693_10021249 3300025915 Bacteria 5158
74 Ga0207663_10001206 3300025916 Bacteria 11940
75 Ga0207660_10036273 3300025917 Bacteria 3427
76 Ga0207652_10110649 3300025921 Bacteria 2436
77 Ga0207687_10046180 3300025927 Bacteria 3014
78 Ga0207700_10003347 3300025928 Bacteria 9298
79 Ga0207700_10009935 3300025928 Bacteria 5975
80 Ga0207700_10042113 3300025928 Bacteria 3346
81 Ga0207664_10012974 3300025929 Bacteria 5970
82 Ga0207690_10062942 3300025932 Unclassified 2528
83 Ga0207665_10013741 3300025939 Bacteria 5325
84 Ga0207667_10146038 3300025949 Bacteria 2435
85 Ga0207640_10092657 3300025981 Bacteria 2097
86 Ga0207428_10006625 3300027907 Bacteria 10652
87 Ga0307515_10231552 3300028794 Bacteria 1639
88 Ga0265325_10003656 3300031241 Bacteria 9969
89 Ga0265339_10000158 3300031249 Bacteria 56155
90 Ga0265313_10000426 3300031595 Bacteria 45023
91 Ga0307415_100110110 3300032126 Bacteria 2042
92 Ga0373944_0001561 3300035089 Bacteria 5790
93 Ga0373936_0031859 3300035113 Bacteria 2083
94 Ga0373945_0018991 3300035116 Bacteria 2343
95 Ga0373943_0004833 3300035170 Bacteria 6091
96 Ga0373946_0003432 3300035171 Bacteria 5621
97 Ga0373924_0042660 3300035410 Bacteria 1862
98 Ga0373927_0005265 3300035695 Bacteria 8948
99 Ga0373927_0007600 3300035695 Bacteria 7339
100 Ga0373947_0000581 3300035725 Bacteria 21444
101 Ga0373947_0022094 3300035725 Bacteria 3687
102 Ga0373925_0006328 3300037068 Bacteria 8722
103 Ga0373925_0048408 3300037068 Bacteria 3167
104 Ga0400483_010094 3300039062 Bacteria 15639
105 Ga0436365_0415116 3300039437 Bacteria 5443
106 Ga0436365_0768275 3300039437 Bacteria 19205
107 Ga0436365_0835364 3300039437 Bacteria 3729
108 Ga0436365_0939513 3300039437 Bacteria 16537
109 Ga0436365_1413221 3300039437 Bacteria 3028
110 Ga0436360_0187881 3300039438 Bacteria 12306
111 Ga0436361_0068100 3300039447 Bacteria 4736
112 Ga0436362_0637566 3300039453 Bacteria 6113
113 Ga0439464_0026293 3300042439 Bacteria 1614
114 Ga0495627_001066 3300046453 Bacteria 18131
115 Ga0495629_0019775 3300046459 Bacteria 4806
116 Ga0495638_0000028 3300046460 Bacteria 330252
117 Ga0495653_0009071 3300046463 Bacteria 8135
118 Ga0495580_0017623 3300046472 Bacteria 5335
119 Ga0495639_0058795 3300046475 Bacteria 1759
120 Ga0495662_0001012 3300046476 Bacteria 13797
121 Ga0495664_0000817 3300046477 Bacteria 15943
122 Ga0495585_0002339 3300046492 Viruses 13628
123 Ga0495607_0000001 3300046501 Bacteria 1245328
124 Ga0495606_0005238 3300046507 Viruses 12520
125 Ga0495610_0000016 3300046512 Bacteria 373959
126 Ga0495610_0007845 3300046512 Bacteria 7022
127 Ga0495610_0011285 3300046512 Bacteria 5474
128 Ga0495616_0030632 3300046513 Bacteria 2825
129 Ga0495618_0000473 3300046514 Bacteria 28654
130 Ga0495620_0017609 3300046515 Bacteria 3555
131 Ga0495630_0007807 3300046517 Bacteria 7660
132 Ga0495630_0010138 3300046517 Bacteria 6791
133 Ga0495631_0001291 3300046518 Viruses 15387
134 Ga0495632_0021541 3300046519 Bacteria 3471
135 Ga0495643_0003046 3300046522 Viruses 12600
136 Ga0495643_0010738 3300046522 Bacteria 5624
137 Ga0495652_0028548 3300046529 Bacteria 4908
138 Ga0495665_0008334 3300046531 Bacteria 5620
139 Ga0495665_0029568 3300046531 Bacteria 2935
140 Ga0495640_0002833 3300046533 Bacteria 13941
141 Ga0495586_0015239 3300046535 Bacteria 4088
142 Ga0495597_0001709 3300046542 Bacteria 15215
143 Ga0495645_0049881 3300046543 Bacteria 3047
144 Ga0495633_0001522 3300046558 Viruses 17859
145 Ga0495633_0010781 3300046558 Bacteria 4970
146 Ga0495634_0008539 3300046642 Bacteria 7614
147 Ga0495634_0010351 3300046642 Bacteria 6834
148 Ga0495625_0000104 3300046660 Bacteria 133234
149 Ga0495635_0009130 3300046663 Bacteria 6923
150 Ga0495661_0000379 3300046665 Bacteria 47773
151 Ga0495599_0049804 3300046678 Bacteria 2626
152 Ga0495646_0037824 3300046680 Bacteria 2983
153 Ga0495624_0013382 3300046690 Bacteria 5595
154 Ga0495670_0000001 3300046691 Bacteria 1556780
155 Ga0495649_0009095 3300046694 Bacteria 5928
156 Ga0495660_0000494 3300046810 Bacteria 32582
157 Ga0495581_0040552 3300047315 Bacteria 2694
158 Ga0495674_0001683 3300047319 Bacteria 21746
159 Ga0495674_0065172 3300047319 Bacteria 3165
160 Ga0495672_0000008 3300047320 Bacteria 568137
161 Ga0495681_0018006 3300047470 Bacteria 3906
162 Ga0495684_0006910 3300047471 Bacteria 8809
163 Ga0495684_0008291 3300047471 Bacteria 8046
164 Ga0495684_0057330 3300047471 Bacteria 2968
165 Ga0495686_0001099 3300047472 Bacteria 32127
166 Ga0495686_0008458 3300047472 Viruses 7548
167 Ga0495686_0027325 3300047472 Bacteria 3727
168 Ga0496104_0073885 3300048907 Bacteria 3244
169 Ga0496107_0039820 3300048910 Bacteria 3372
170 Ga0496108_0009284 3300048911 Bacteria 7960
171 Ga0496110_0133186 3300048913 Bacteria 2245
172 Ga0496119_0004791 3300048922 Bacteria 13278
173 Ga0496122_0004715 3300048925 Bacteria 16745
174 Ga0496123_0000896 3300048926 Bacteria 47149
175 Ga0501036_0017925 3300049572 Bacteria 5928
176 Ga0501038_0008341 3300049574 Bacteria 9534
177 Ga0501038_0119042 3300049574 Bacteria 2180
178 Ga0501039_0071051 3300049575 Bacteria 2704
179 Ga0501041_0022802 3300049577 Bacteria 3751
180 Ga0501042_0030269 3300049578 Bacteria 3822
181 Ga0501046_0000011 3300049580 Bacteria 326457
182 Ga0501047_0025783 3300049581 Bacteria 5653
183 Ga0501048_0002903 3300049582 Bacteria 13083
184 Ga0501067_0022381 3300049583 Bacteria 3498
185 Ga0501071_0050701 3300049587 Bacteria 2990
186 Ga0501074_0058915 3300049590 Bacteria 2767
187 Ga0501079_0027787 3300049741 Bacteria 4339
188 nmdc:mga00v17_48407_c1 3300050491 Bacteria 2577
189 nmdc:mga0yw44_1178_c1 3300050492 Bacteria 10193
190 nmdc:mga0yw44_45306_c1 3300050492 Bacteria 2636
191 nmdc:mga06z11_5860_c1 3300050494 Bacteria 4962
192 nmdc:mga07m45_13914_c1 3300050496 Bacteria 3895
193 nmdc:mga05p37_140_c1 3300050507 Bacteria 67571
194 nmdc:mga09592_1649_c1 3300050508 Bacteria 17953
195 nmdc:mga0qj67_226392_c1 3300050509 Bacteria 1518
196 nmdc:mga0qj67_24966_c1 3300050509 Bacteria 4612
197 nmdc:mga06r32_671_c1 3300050510 Bacteria 29849
198 nmdc:mga08y16_104_c1 3300050511 Bacteria 70280
199 nmdc:mga0n895_70607_c1 3300050512 Bacteria 3461
200 nmdc:mga0rr50_53320_c1 3300050513 Bacteria 3008
201 nmdc:mga08x19_6_c1 3300050514 Bacteria 405679
202 Ga0495601_0000860 3300053077 Bacteria 16549
203 Ga0495612_0000075 3300053078 Bacteria 45362
204 Ga0495619_0003526 3300053085 Bacteria 10092
205 Ga0495619_0112163 3300053085 Bacteria 1864
206 Ga0500556_0000290 3300053104 Bacteria 39103
207 Ga0500568_0019093 3300053139 Bacteria 2987
208 Ga0500622_0040829 3300053156 Bacteria 2415
209 Ga0500636_0006397 3300053177 Bacteria 6760
210 Ga0500645_008991 3300053730 Bacteria 3374
211 Ga0501084_0363457 3300054114 Bacteria 1223
212 Ga0501082_0025338 3300060353 Bacteria 5111
213 Ga0530510_0031673 3300061734 Bacteria 3803
214 Ga0530510_0121353 3300061734 Bacteria 1919
215 2842696855 2842694124 Bacteria 4063419
216 2821448393 2821443989 Bacteria 7658172
217 2828308328 2828305725 Bacteria 4916900
218 2841915836 2841911363 Bacteria 6173697
219 2841921784 2841917233 Bacteria 6173500
220 2909043095 2909042592 Bacteria 6499737
221 2917704470 2917699015 Bacteria 7043791
222 2919451913 2919450847 Bacteria 5631160
223 3000019706 3000017691 Bacteria 3772574
224 8001849995 8001845381 Bacteria 5804942
225 JGI25151J46595_10000984
226 JGI25160J50197_1004159
227 Ga0070666_10127353
228 Ga0070680_100081104
229 Ga0070680_100100882
230 Ga0070682_100089857
231 Ga0070659_100110842
232 Ga0070709_10000738
233 Ga0070714_100004606
234 Ga0070713_100017576
235 Ga0070713_100026156
236 Ga0070713_100031885
237 Ga0070710_10021794
238 Ga0070711_100069924
239 Ga0070705_100027360
240 Ga0070679_100055086
241 Ga0070679_100222214
242 Ga0070697_100000639
243 Ga0068853_100001683
244 Ga0070695_100005063
245 Ga0070696_100009200
246 Ga0070693_100012571
247 Ga0070704_100007997
248 Ga0068855_100033118
249 Ga0068854_100081735
250 Ga0081455_10013815
251 Ga0070717_10000485
252 Ga0075365_10018075
253 Ga0075365_10062981
254 Ga0075364_10039468
255 Ga0070715_10001137
256 Ga0070712_100019724
257 Ga0075362_10022945
258 Ga0075367_10004655
259 Ga0075370_10042196
260 Ga0075428_100005241
261 Ga0075428_100168718
262 Ga0075430_100010396
263 Ga0075430_100032927
264 Ga0075431_100000105
265 Ga0075434_100031153
266 Ga0075429_100005372
267 Ga0075436_100091542
268 Ga0075435_100075222
269 Ga0105240_10105287
270 Ga0111539_10000792
271 Ga0111539_10108856
272 Ga0114129_10003927
273 Ga0114129_10090927
274 Ga0114129_10527465
275 Ga0105243_10184939
276 Ga0105241_10029838
277 Ga0105238_10078003
278 Ga0105249_10001791
279 Ga0157373_10079829
280 Ga0157370_10021721
281 Ga0171462_1006
282 Ga0157374_10225290
283 Ga0157372_10109154
284 Ga0213876_10001467
285 Ga0213876_10017275
286 Ga0213876_10031247
287 Ga0209130_1001260
288 Ga0209025_1001732
289 Ga0209025_1055912
290 Ga0209758_1002257
291 Ga0207426_1000088
292 Ga0207692_10000282
293 Ga0207688_10035658
294 Ga0207654_10094722
295 Ga0207707_10004788
296 Ga0207693_10016176
297 Ga0207693_10021249
298 Ga0207663_10001206
299 Ga0207660_10036273
300 Ga0207652_10110649
301 Ga0207687_10046180
302 Ga0207700_10003347
303 Ga0207700_10009935
304 Ga0207700_10042113
305 Ga0207664_10012974
306 Ga0207690_10062942
307 Ga0207665_10013741
308 Ga0207667_10146038
309 Ga0207640_10092657
310 Ga0207428_10006625
311 Ga0307515_10231552
312 Ga0265325_10003656
313 Ga0265339_10000158
314 Ga0265313_10000426
315 Ga0307415_100110110
316 Ga0373944_0001561
317 Ga0373936_0031859
318 Ga0373945_0018991
319 Ga0373943_0004833
320 Ga0373946_0003432
321 Ga0373924_0042660
322 Ga0373927_0005265
323 Ga0373927_0007600
324 Ga0373947_0000581
325 Ga0373947_0022094
326 Ga0373925_0006328
327 Ga0373925_0048408
328 Ga0400483_010094
329 Ga0436365_0415116
330 Ga0436365_0768275
331 Ga0436365_0835364
332 Ga0436365_0939513
333 Ga0436365_1413221
334 Ga0436360_0187881
335 Ga0436361_0068100
336 Ga0436362_0637566
337 Ga0439464_0026293
338 Ga0495627_001066
339 Ga0495629_0019775
340 Ga0495638_0000028
341 Ga0495653_0009071
342 Ga0495580_0017623
343 Ga0495639_0058795
344 Ga0495662_0001012
345 Ga0495664_0000817
346 Ga0495585_0002339
347 Ga0495607_0000001
348 Ga0495606_0005238
349 Ga0495610_0000016
350 Ga0495610_0007845
351 Ga0495610_0011285
352 Ga0495616_0030632
353 Ga0495618_0000473
354 Ga0495620_0017609
355 Ga0495630_0007807
356 Ga0495630_0010138
357 Ga0495631_0001291
358 Ga0495632_0021541
359 Ga0495643_0003046
360 Ga0495643_0010738
361 Ga0495652_0028548
362 Ga0495665_0008334
363 Ga0495665_0029568
364 Ga0495640_0002833
365 Ga0495586_0015239
366 Ga0495597_0001709
367 Ga0495645_0049881
368 Ga0495633_0001522
369 Ga0495633_0010781
370 Ga0495634_0008539
371 Ga0495634_0010351
372 Ga0495625_0000104
373 Ga0495635_0009130
374 Ga0495661_0000379
375 Ga0495599_0049804
376 Ga0495646_0037824
377 Ga0495624_0013382
378 Ga0495670_0000001
379 Ga0495649_0009095
380 Ga0495660_0000494
381 Ga0495581_0040552
382 Ga0495674_0001683
383 Ga0495674_0065172
384 Ga0495672_0000008
385 Ga0495681_0018006
386 Ga0495684_0006910
387 Ga0495684_0008291
388 Ga0495684_0057330
389 Ga0495686_0001099
390 Ga0495686_0008458
391 Ga0495686_0027325
392 Ga0496104_0073885
393 Ga0496107_0039820
394 Ga0496108_0009284
395 Ga0496110_0133186
396 Ga0496119_0004791
397 Ga0496122_0004715
398 Ga0496123_0000896
399 Ga0501036_0017925
400 Ga0501038_0008341
401 Ga0501038_0119042
402 Ga0501039_0071051
403 Ga0501041_0022802
404 Ga0501042_0030269
405 Ga0501046_0000011
406 Ga0501047_0025783
407 Ga0501048_0002903
408 Ga0501067_0022381
409 Ga0501071_0050701
410 Ga0501074_0058915
411 Ga0501079_0027787
412 nmdc:mga00v17_48407_c1
413 nmdc:mga0yw44_1178_c1
414 nmdc:mga0yw44_45306_c1
415 nmdc:mga06z11_5860_c1
416 nmdc:mga07m45_13914_c1
417 nmdc:mga05p37_140_c1
418 nmdc:mga09592_1649_c1
419 nmdc:mga0qj67_226392_c1
420 nmdc:mga0qj67_24966_c1
421 nmdc:mga06r32_671_c1
422 nmdc:mga08y16_104_c1
423 nmdc:mga0n895_70607_c1
424 nmdc:mga0rr50_53320_c1
425 nmdc:mga08x19_6_c1
426 Ga0495601_0000860
427 Ga0495612_0000075
428 Ga0495619_0003526
429 Ga0495619_0112163
430 Ga0500556_0000290
431 Ga0500568_0019093
432 Ga0500622_0040829
433 Ga0500636_0006397
434 Ga0500645_008991
435 Ga0501084_0363457
436 Ga0501082_0025338
437 Ga0530510_0031673
438 Ga0530510_0121353
439 2842696855
440 2821448393
441 2828308328
442 2841915836
443 2841921784
444 2909043095
445 2917704470
446 2919451913
447 3000019706
448 8001849995

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01743

PolyA_pol

Poly A polymerase head domain

28

150

0.94

PF12627

PolyA_pol_RNAbd

Probable RNA and SrmB- binding site of polymerase A

181

240

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ou5-assembly1.cif.gz_B crystal structure of human cca-adding enzyme 0.8232 5 346
6tvz-assembly1.cif.gz_A structure of a psychrophilic cca-adding enzyme crystallized in the xtalcontroller device 0.8163 22 396
1ou5-assembly1.cif.gz_B crystal structure of human cca-adding enzyme 0.8145 5 346
6qy6-assembly1.cif.gz_A crystal structure of the cca-adding enzyme of a psychrophilic organism 0.8049 22 397
1miy-assembly1.cif.gz_A crystal structure of bacillus stearothermophilus cca-adding enzyme in complex with ctp 0.7955 10 400
ID Description Score Start End Superfamily
1miwB01 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9426 18 157 3.30.460.10
af_Q2G256_1_109_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9185 46 155 3.30.460.10
af_Q4VBH2_28_179_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9155 5 148 3.30.460.10
1miyB02 Mainly Alpha;Orthogonal Bundle;Hydrophobic Seed Protein; 0.9136 158 240 1.10.110.30
af_Q2G256_1_109_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9025 46 155 3.30.460.10
ID Description Score Start End GO Terms
AF-A0A658NJI9-F1-model_v4 CCA tRNA nucleotidyltransferase 0.9789 24 102 GO:0000049
GO:0008033
GO:0016779
AF-A0A4U0YVB0-F1-model_v4 CCA tRNA nucleotidyltransferase 0.967 5 238 GO:0000049
GO:0000166
GO:0008033
GO:0016779
AF-A0A436M916-F1-model_v4 deleted 0.9636 5 133
AF-A0A7Y7IZE4-F1-model_v4 CCA tRNA nucleotidyltransferase 0.9632 17 180 GO:0000049
GO:0008033
GO:0016779
AF-A0A4U0YVB0-F1-model_v4 CCA tRNA nucleotidyltransferase 0.963 5 238 GO:0000049
GO:0000166
GO:0008033
GO:0016779

Map