F337265

General Info

Members Datasets Scaffolds Average Seq Length
224 191 448 730

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2842698319|2842700230
Length 837
Sequence ESDAIAKGTDAEEQEAALAAEDSHGENGPGEDDLDSRTPNAAPAKGPAPRRRPAGAGTVRAPAAHARVTKPASTASKSRPGATAQDSASADDAETDSILVETVIADTVPERAAAEPPARESVLAAGRALRESPERFVNRELSWLQFNRRVLEEASNTSHPLLEQLRFLSISANNLDEFFMVRVAGLHDQVRAGLIQPSQDGLSPAEQLARIGSEVSRLALDQQRRWRELRDDLHGVGIDLVEPGDLTPEHKSWLEEYFLSHVFPVLTPLAIDPAHPFPFLSNLGSSIALMMVRPRDGRTLRALIRLPSVLGRFVRLPDMAGDTTARFIAIEQLIVLFTGRLFPGYFVKGQGAFRVIRDSDLEIEEEAEDLVLHFETALKQRRRGVVIRLEVEAGMPEDLRAFVADELEIGYDAIFVVEGMLALNELAQIVGIDRPDLKFKSYNPRFPERIRESGGDVFAAIRQKDFIVHHPYESFDSVVQFLAQAARDPNVVAIKQTLYRTSSNSPIVAALAEAAELGKSVTALVELKARFDEEANIRWARDLEKAGAQVVFGFIELKTHAKLSMVVRREGDKLVTYCHVGTGNYHPITARVYTDQSFFTADPAVARDVSRIFNYITGYAEPAELERMSVSPLTLKPRLIESIAAEVAHAKAGRPAAIWIKCNSLVDAQIIDALYDASQAGVQIDCVVRGICCLRPGIPGLSETIRVKSIVGRFLEHGRIYAFGNGFGLPHPKATVSISSADLMSRNLDRRVEALLPITNQTVHQQVLDQIMLANLLDNQQSWRVLASGASERVQPAEGEEPFNAHKYFMTNPSLSGRGKSSKKSSPRALSRRAQRS

Samples

Sample ID Description Type Environment
1 3300000044 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - sample from Arabidopsis soil old Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
4 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
5 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
22 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
23 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
24 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
28 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
29 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
33 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
34 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
35 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
37 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
39 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
41 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
58 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
59 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
62 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
63 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
64 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
65 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
66 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
67 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
68 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
69 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
70 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
71 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
72 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
75 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
76 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
77 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
78 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
79 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
80 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
81 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
82 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
83 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
84 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
85 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
86 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
87 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
88 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
89 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
90 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
91 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
92 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
93 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
94 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
95 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
96 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
97 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
98 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
99 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
100 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
101 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
102 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
103 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
104 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
105 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
106 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
107 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
108 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
109 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
110 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
111 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
112 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
113 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
114 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
115 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
116 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
117 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
118 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
121 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
122 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
123 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
124 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
125 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
126 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
139 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
140 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
141 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
142 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
146 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
147 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
148 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
149 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
150 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
151 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
154 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
155 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
156 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
157 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
158 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
159 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
160 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
161 2643221733 Bosea sp. Root381 Isolate Unclassified
162 2643221734 Bosea sp. Root670 Isolate Unclassified
163 2643221736 Bosea sp. Root483D1 Isolate Unclassified
164 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
165 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
166 2773857925 Microvirga vignae BR3299 Isolate Unclassified
167 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
168 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
169 2841760612 Bosea sp. Tri-49 Isolate Nodule
170 2844104063 Bosea sp. Tri-39 Isolate Nodule
171 2851182111 Bosea sp. Tri-44 Isolate Nodule
172 2851246043 Bosea sp. Tri-54 Isolate Nodule
173 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
174 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
175 2884298095 Microvirga thermotolerans HR1 Isolate Rhizosphere
176 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
177 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
178 2902330777 Methylobacterium sp. 2A Isolate Unclassified
179 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
180 2909042592 Labrys sp. LIt4 Isolate Nodule
181 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
182 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
183 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
184 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
185 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
186 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified
187 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
188 641522639 Methylobacterium sp. 4-46 Isolate Nodule
189 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
190 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified
191 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.14
Metatranscriptomes 0.45
Isolates 17.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.71
Nodule 5.36
Rhizoplane 6.25
Rhizosphere 65.62
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 ARSoilOldRDRAFT_c000099 3300000044 Bacteria 16454
2 JGI25151J46595_10000086 3300003187 Bacteria 126250
3 Ga0055526_1002950 3300003771 Bacteria 11155
4 Ga0055524_1000515 3300003775 Bacteria 29812
5 Ga0055536_1000874 3300003781 Bacteria 19576
6 Ga0055531_10010442 3300003794 Bacteria 4613
7 Ga0065165_1000393 3300005262 Bacteria 71081
8 Ga0070660_100015593 3300005339 Bacteria 5491
9 Ga0070674_100015523 3300005356 Bacteria 4755
10 Ga0070659_100003616 3300005366 Bacteria 11000
11 Ga0070709_10025594 3300005434 Bacteria 3488
12 Ga0070714_100036568 3300005435 Bacteria 4118
13 Ga0070663_100001658 3300005455 Bacteria 12315
14 Ga0070681_10005734 3300005458 Bacteria 12003
15 Ga0070679_100007335 3300005530 Bacteria 10301
16 Ga0070693_100025875 3300005547 Bacteria 3161
17 Ga0068856_100097558 3300005614 Bacteria 2928
18 Ga0068858_100014343 3300005842 Bacteria 7472
19 Ga0081538_10036880 3300005981 Bacteria 3182
20 Ga0081540_1011649 3300005983 Bacteria 5863
21 Ga0070712_100021306 3300006175 Bacteria 4256
22 Ga0105243_10009594 3300009148 Bacteria 7371
23 Ga0105241_10009810 3300009174 Bacteria 7036
24 Ga0105248_10019168 3300009177 Bacteria 7569
25 Ga0105237_10006119 3300009545 Bacteria 13453
26 Ga0105238_10012213 3300009551 Bacteria 8659
27 Ga0105238_10044764 3300009551 Bacteria 4473
28 Ga0157370_10055725 3300013104 Bacteria 3764
29 Ga0157370_10110197 3300013104 Bacteria 2573
30 Ga0157369_10108762 3300013105 Bacteria 2948
31 Ga0171462_1011 3300013250 Bacteria 229282
32 Ga0163163_10003341 3300014325 Bacteria 13617
33 Ga0206356_10653884 3300020070 Bacteria 3787
34 Ga0209233_1008142 3300025261 Bacteria 3269
35 Ga0209130_1000061 3300025284 Bacteria 200990
36 Ga0209675_1000514 3300025291 Bacteria 28599
37 Ga0209676_1000046 3300025292 Bacteria 409173
38 Ga0209676_1005587 3300025292 Bacteria 6497
39 Ga0209025_1000016 3300025294 Bacteria 770739
40 Ga0209025_1001935 3300025294 Bacteria 23940
41 Ga0209564_1000035 3300025295 Bacteria 442446
42 Ga0209758_1000252 3300025297 Bacteria 108214
43 Ga0209050_1004800 3300025298 Bacteria 8901
44 Ga0209256_1000025 3300025299 Bacteria 442449
45 Ga0209257_1000481 3300025304 Bacteria 72432
46 Ga0207682_10002991 3300025893 Bacteria 7414
47 Ga0207645_10020407 3300025907 Bacteria 4337
48 Ga0207707_10017300 3300025912 Bacteria 6284
49 Ga0207707_10027105 3300025912 Bacteria 5010
50 Ga0207660_10076538 3300025917 Bacteria 2447
51 Ga0207657_10024911 3300025919 Bacteria 5529
52 Ga0207652_10004498 3300025921 Bacteria 11328
53 Ga0207652_10047050 3300025921 Bacteria 3684
54 Ga0207690_10031945 3300025932 Bacteria 3374
55 Ga0207691_10006864 3300025940 Bacteria 10986
56 Ga0207667_10020243 3300025949 Bacteria 7404
57 Ga0207640_10047750 3300025981 Bacteria 2763
58 Ga0207639_10004351 3300026041 Bacteria 9555
59 Ga0207678_10000561 3300026067 Bacteria 33981
60 Ga0207641_10057579 3300026088 Bacteria 3306
61 Ga0207648_10022293 3300026089 Bacteria 5690
62 Ga0207683_10010046 3300026121 Bacteria 8077
63 Ga0209966_1000918 3300027695 Bacteria 5574
64 Ga0307513_10006077 3300031456 Bacteria 15845
65 Ga0265313_10000116 3300031595 Bacteria 80097
66 Ga0265314_10001754 3300031711 Bacteria 23419
67 Ga0265342_10000461 3300031712 Bacteria 44177
68 Ga0307510_10019837 3300033180 Bacteria 7874
69 Ga0373923_0000055 3300035111 Bacteria 17629
70 Ga0373956_0007661 3300035119 Bacteria 4351
71 Ga0373957_0001932 3300035120 Bacteria 5767
72 Ga0373943_0001550 3300035170 Bacteria 10416
73 Ga0373924_0000943 3300035410 Bacteria 9194
74 Ga0373935_0000045 3300035692 Bacteria 48915
75 Ga0373927_0045624 3300035695 Bacteria 2834
76 Ga0373947_0002901 3300035725 Bacteria 10241
77 Ga0373937_0000369 3300036401 Bacteria 41814
78 Ga0373925_0000178 3300037068 Bacteria 69362
79 Ga0373925_0017502 3300037068 Bacteria 5196
80 Ga0395900_0135706 3300037418 Bacteria 2521
81 Ga0436365_1324408 3300039437 Bacteria 4765
82 Ga0466957_0034890 3300044842 Bacteria 3017
83 Ga0466959_0049887 3300045049 Bacteria 3074
84 Ga0451576_0000122 3300045051 Bacteria 197797
85 Ga0466958_0008776 3300045836 Bacteria 5614
86 Ga0495592_0000118 3300046454 Bacteria 69831
87 Ga0495629_0006293 3300046459 Bacteria 8810
88 Ga0495651_0000150 3300046462 Bacteria 51171
89 Ga0495653_0000138 3300046463 Bacteria 60857
90 Ga0495653_0089228 3300046463 Bacteria 2260
91 Ga0495664_0000005 3300046477 Bacteria 439635
92 Ga0495608_0000083 3300046511 Bacteria 69238
93 Ga0495618_0000079 3300046514 Bacteria 69375
94 Ga0495628_0000033 3300046516 Bacteria 118203
95 Ga0495630_0000490 3300046517 Bacteria 29272
96 Ga0495652_0000001 3300046529 Bacteria 1045081
97 Ga0495652_0075958 3300046529 Bacteria 2788
98 Ga0495640_0000010 3300046533 Bacteria 214167
99 Ga0495587_0000090 3300046536 Bacteria 69871
100 Ga0495645_0000005 3300046543 Bacteria 443917
101 Ga0495633_0002322 3300046558 Bacteria 13541
102 Ga0495667_0000079 3300046559 Bacteria 69267
103 Ga0495634_0000166 3300046642 Bacteria 60485
104 Ga0495635_0000055 3300046663 Bacteria 69432
105 Ga0495635_0020410 3300046663 Bacteria 4616
106 Ga0495657_0000124 3300046675 Bacteria 69346
107 Ga0495599_0000075 3300046678 Bacteria 69327
108 Ga0495623_0000003 3300046679 Bacteria 147316
109 Ga0495646_0000042 3300046680 Bacteria 69329
110 Ga0495647_0016499 3300046681 Bacteria 2600
111 Ga0495658_0002790 3300046683 Bacteria 8776
112 Ga0495613_0008989 3300046689 Bacteria 7413
113 Ga0495649_0000279 3300046694 Bacteria 45005
114 Ga0495600_0000052 3300046809 Bacteria 69430
115 Ga0495600_0050839 3300046809 Bacteria 2705
116 Ga0495604_0000010 3300047317 Bacteria 312236
117 Ga0495674_0000013 3300047319 Bacteria 248475
118 Ga0495680_0000275 3300047322 Bacteria 57457
119 Ga0495675_0000297 3300047444 Bacteria 35718
120 Ga0495684_0000008 3300047471 Bacteria 201370
121 Ga0495602_0000134 3300048088 Bacteria 69349
122 Ga0496100_0001182 3300048903 Bacteria 12715
123 Ga0496101_0010061 3300048904 Bacteria 6235
124 Ga0496103_0001803 3300048906 Bacteria 13953
125 Ga0496103_0022550 3300048906 Bacteria 3792
126 Ga0496104_0024625 3300048907 Bacteria 5537
127 Ga0496106_0006203 3300048909 Bacteria 8842
128 Ga0496107_0006742 3300048910 Bacteria 7902
129 Ga0496109_0053871 3300048912 Bacteria 3670
130 Ga0496112_0012759 3300048915 Bacteria 7731
131 Ga0496112_0109750 3300048915 Bacteria 2729
132 Ga0496114_0016247 3300048917 Bacteria 5995
133 Ga0496115_0007410 3300048918 Bacteria 8071
134 Ga0496115_0026867 3300048918 Bacteria 4497
135 Ga0496115_0030651 3300048918 Bacteria 4233
136 Ga0496116_0018827 3300048919 Bacteria 5306
137 Ga0496117_0021744 3300048920 Bacteria 5176
138 Ga0496122_0018683 3300048925 Bacteria 6384
139 Ga0496123_0001897 3300048926 Bacteria 27276
140 Ga0496125_0015353 3300048928 Bacteria 7414
141 Ga0501032_0007058 3300049569 Bacteria 8238
142 Ga0501034_0000014 3300049571 Bacteria 297798
143 Ga0501034_0052591 3300049571 Bacteria 4103
144 Ga0501034_0071223 3300049571 Bacteria 3486
145 Ga0501034_0112734 3300049571 Bacteria 2709
146 Ga0501036_0001378 3300049572 Bacteria 18662
147 Ga0501037_0002427 3300049573 Bacteria 13473
148 Ga0501037_0010510 3300049573 Bacteria 6797
149 Ga0501038_0020234 3300049574 Bacteria 5987
150 Ga0501038_0073918 3300049574 Bacteria 2885
151 Ga0501039_0000289 3300049575 Bacteria 35699
152 Ga0501039_0009917 3300049575 Bacteria 7262
153 Ga0501043_0002048 3300049579 Bacteria 17205
154 Ga0501046_0000010 3300049580 Bacteria 331082
155 Ga0501046_0024492 3300049580 Bacteria 4950
156 Ga0501046_0030837 3300049580 Bacteria 4350
157 Ga0501047_0000291 3300049581 Bacteria 57615
158 Ga0501047_0000306 3300049581 Bacteria 56352
159 Ga0501047_0007634 3300049581 Bacteria 10184
160 Ga0501048_0001091 3300049582 Bacteria 20359
161 Ga0501048_0004688 3300049582 Bacteria 10408
162 Ga0501067_0006495 3300049583 Bacteria 6484
163 Ga0501070_0002955 3300049586 Bacteria 14801
164 Ga0501070_0005601 3300049586 Bacteria 10711
165 Ga0501073_0015083 3300049589 Bacteria 5606
166 Ga0501074_0012520 3300049590 Bacteria 6167
167 Ga0501074_0019038 3300049590 Bacteria 4986
168 Ga0501079_0008371 3300049741 Bacteria 7837
169 Ga0501080_0000268 3300049742 Bacteria 39347
170 Ga0501083_0001300 3300049744 Bacteria 16891
171 Ga0501035_0000034 3300049822 Bacteria 174589
172 Ga0501035_0027822 3300049822 Bacteria 5167
173 Ga0501044_0000039 3300049823 Bacteria 158218
174 Ga0501044_0003767 3300049823 Bacteria 17034
175 Ga0501044_0073683 3300049823 Bacteria 3470
176 nmdc:mga0k408_12608_c1 3300050493 Bacteria 4620
177 Ga0495601_0000003 3300053077 Bacteria 493642
178 Ga0495612_0000077 3300053078 Bacteria 44609
179 Ga0495595_0000094 3300053084 Bacteria 41985
180 Ga0495619_0000091 3300053085 Bacteria 69370
181 Ga0500651_0002118 3300053093 Bacteria 10328
182 Ga0500641_0000987 3300053096 Bacteria 10101
183 Ga0500616_0000006 3300053153 Bacteria 944738
184 Ga0500616_0025964 3300053153 Bacteria 3247
185 Ga0500645_000033 3300053730 Bacteria 119279
186 2842700230 2842698319 Bacteria 5190321
187 2509078425 2508501114 Bacteria 7082538
188 2545674966 2545555834 Bacteria 8130841
189 2596371576 2595698237 Bacteria 6712432
190 2643884874 2643221574 Bacteria 2789653
191 2644352200 2643221663 Bacteria 3425771
192 2644547328 2643221699 Bacteria 5731501
193 2644549748 2643221699 Bacteria 5731501
194 2644729251 2643221733 Bacteria 5690728
195 2644733116 2643221734 Bacteria 5365412
196 2644746943 2643221736 Bacteria 6608466
197 2738746745 2738541281 Bacteria 5112672
198 2739355975 2738543032 Bacteria 5115625
199 2774872619 2773857925 Bacteria 6472445
200 2829750931 2829745981 Bacteria 5406054
201 2835315466 2835312727 Bacteria 7413381
202 2841762318 2841760612 Bacteria 6454112
203 2844109856 2844104063 Bacteria 6440972
204 2851186885 2851182111 Bacteria 6047226
205 2851248331 2851246043 Bacteria 6439203
206 2861692055 2861691609 Bacteria 5628931
207 2882458217 2882456835 Bacteria 6863978
208 2884299833 2884298095 Bacteria 3823049
209 2889307288 2889306138 Bacteria 6358934
210 2894239679 2894232714 Bacteria 8834183
211 2902332003 2902330777 Bacteria 6395352
212 2902410314 2902405164 Bacteria 6784948
213 2909048210 2909042592 Bacteria 6499737
214 2917700560 2917699015 Bacteria 7043791
215 2919142751 2919138771 Bacteria 5281312
216 2928127832 2928125067 Bacteria 5937560
217 2928975355 2928972540 Bacteria 3058286
218 2941487316 2941485952 Bacteria 3591484
219 2977241657 2977240413 Bacteria 3191065
220 3003667898 3003665799 Bacteria 7279786
221 641645294 641522639 Bacteria 7737025
222 643603173 643348564 Bacteria 8839022
223 8054566594 8054563764 Bacteria 5592885
224 8057535527 8057529695 Bacteria 6306553
225 ARSoilOldRDRAFT_c000099
226 JGI25151J46595_10000086
227 Ga0055526_1002950
228 Ga0055524_1000515
229 Ga0055536_1000874
230 Ga0055531_10010442
231 Ga0065165_1000393
232 Ga0070660_100015593
233 Ga0070674_100015523
234 Ga0070659_100003616
235 Ga0070709_10025594
236 Ga0070714_100036568
237 Ga0070663_100001658
238 Ga0070681_10005734
239 Ga0070679_100007335
240 Ga0070693_100025875
241 Ga0068856_100097558
242 Ga0068858_100014343
243 Ga0081538_10036880
244 Ga0081540_1011649
245 Ga0070712_100021306
246 Ga0105243_10009594
247 Ga0105241_10009810
248 Ga0105248_10019168
249 Ga0105237_10006119
250 Ga0105238_10012213
251 Ga0105238_10044764
252 Ga0157370_10055725
253 Ga0157370_10110197
254 Ga0157369_10108762
255 Ga0171462_1011
256 Ga0163163_10003341
257 Ga0206356_10653884
258 Ga0209233_1008142
259 Ga0209130_1000061
260 Ga0209675_1000514
261 Ga0209676_1000046
262 Ga0209676_1005587
263 Ga0209025_1000016
264 Ga0209025_1001935
265 Ga0209564_1000035
266 Ga0209758_1000252
267 Ga0209050_1004800
268 Ga0209256_1000025
269 Ga0209257_1000481
270 Ga0207682_10002991
271 Ga0207645_10020407
272 Ga0207707_10017300
273 Ga0207707_10027105
274 Ga0207660_10076538
275 Ga0207657_10024911
276 Ga0207652_10004498
277 Ga0207652_10047050
278 Ga0207690_10031945
279 Ga0207691_10006864
280 Ga0207667_10020243
281 Ga0207640_10047750
282 Ga0207639_10004351
283 Ga0207678_10000561
284 Ga0207641_10057579
285 Ga0207648_10022293
286 Ga0207683_10010046
287 Ga0209966_1000918
288 Ga0307513_10006077
289 Ga0265313_10000116
290 Ga0265314_10001754
291 Ga0265342_10000461
292 Ga0307510_10019837
293 Ga0373923_0000055
294 Ga0373956_0007661
295 Ga0373957_0001932
296 Ga0373943_0001550
297 Ga0373924_0000943
298 Ga0373935_0000045
299 Ga0373927_0045624
300 Ga0373947_0002901
301 Ga0373937_0000369
302 Ga0373925_0000178
303 Ga0373925_0017502
304 Ga0395900_0135706
305 Ga0436365_1324408
306 Ga0466957_0034890
307 Ga0466959_0049887
308 Ga0451576_0000122
309 Ga0466958_0008776
310 Ga0495592_0000118
311 Ga0495629_0006293
312 Ga0495651_0000150
313 Ga0495653_0000138
314 Ga0495653_0089228
315 Ga0495664_0000005
316 Ga0495608_0000083
317 Ga0495618_0000079
318 Ga0495628_0000033
319 Ga0495630_0000490
320 Ga0495652_0000001
321 Ga0495652_0075958
322 Ga0495640_0000010
323 Ga0495587_0000090
324 Ga0495645_0000005
325 Ga0495633_0002322
326 Ga0495667_0000079
327 Ga0495634_0000166
328 Ga0495635_0000055
329 Ga0495635_0020410
330 Ga0495657_0000124
331 Ga0495599_0000075
332 Ga0495623_0000003
333 Ga0495646_0000042
334 Ga0495647_0016499
335 Ga0495658_0002790
336 Ga0495613_0008989
337 Ga0495649_0000279
338 Ga0495600_0000052
339 Ga0495600_0050839
340 Ga0495604_0000010
341 Ga0495674_0000013
342 Ga0495680_0000275
343 Ga0495675_0000297
344 Ga0495684_0000008
345 Ga0495602_0000134
346 Ga0496100_0001182
347 Ga0496101_0010061
348 Ga0496103_0001803
349 Ga0496103_0022550
350 Ga0496104_0024625
351 Ga0496106_0006203
352 Ga0496107_0006742
353 Ga0496109_0053871
354 Ga0496112_0012759
355 Ga0496112_0109750
356 Ga0496114_0016247
357 Ga0496115_0007410
358 Ga0496115_0026867
359 Ga0496115_0030651
360 Ga0496116_0018827
361 Ga0496117_0021744
362 Ga0496122_0018683
363 Ga0496123_0001897
364 Ga0496125_0015353
365 Ga0501032_0007058
366 Ga0501034_0000014
367 Ga0501034_0052591
368 Ga0501034_0071223
369 Ga0501034_0112734
370 Ga0501036_0001378
371 Ga0501037_0002427
372 Ga0501037_0010510
373 Ga0501038_0020234
374 Ga0501038_0073918
375 Ga0501039_0000289
376 Ga0501039_0009917
377 Ga0501043_0002048
378 Ga0501046_0000010
379 Ga0501046_0024492
380 Ga0501046_0030837
381 Ga0501047_0000291
382 Ga0501047_0000306
383 Ga0501047_0007634
384 Ga0501048_0001091
385 Ga0501048_0004688
386 Ga0501067_0006495
387 Ga0501070_0002955
388 Ga0501070_0005601
389 Ga0501073_0015083
390 Ga0501074_0012520
391 Ga0501074_0019038
392 Ga0501079_0008371
393 Ga0501080_0000268
394 Ga0501083_0001300
395 Ga0501035_0000034
396 Ga0501035_0027822
397 Ga0501044_0000039
398 Ga0501044_0003767
399 Ga0501044_0073683
400 nmdc:mga0k408_12608_c1
401 Ga0495601_0000003
402 Ga0495612_0000077
403 Ga0495595_0000094
404 Ga0495619_0000091
405 Ga0500651_0002118
406 Ga0500641_0000987
407 Ga0500616_0000006
408 Ga0500616_0025964
409 Ga0500645_000033
410 2842700230
411 2509078425
412 2545674966
413 2596371576
414 2643884874
415 2644352200
416 2644547328
417 2644549748
418 2644729251
419 2644733116
420 2644746943
421 2738746745
422 2739355975
423 2774872619
424 2829750931
425 2835315466
426 2841762318
427 2844109856
428 2851186885
429 2851248331
430 2861692055
431 2882458217
432 2884299833
433 2889307288
434 2894239679
435 2902332003
436 2902410314
437 2909048210
438 2917700560
439 2919142751
440 2928127832
441 2928975355
442 2941487316
443 2977241657
444 3003667898
445 641645294
446 643603173
447 8054566594
448 8057535527

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17941

PP_kinase_C_1

Polyphosphate kinase C-terminal domain 1

456

622

0.99

PF13089

PP_kinase_N

Polyphosphate kinase N-terminal domain

136

241

0.98

PF02503

PP_kinase

Polyphosphate kinase middle domain

249

429

0.96

PF13090

PP_kinase_C

Polyphosphate kinase C-terminal domain 2

628

806

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xdo-assembly1.cif.gz_A crystal structure of escherichia coli polyphosphate kinase 0.8482 41 700
2o8r-assembly1.cif.gz_A crystal structure of polyphosphate kinase from porphyromonas gingivalis 0.8317 41 700
2o8r-assembly1.cif.gz_A crystal structure of polyphosphate kinase from porphyromonas gingivalis 0.8166 41 700
1xdo-assembly1.cif.gz_A crystal structure of escherichia coli polyphosphate kinase 0.8161 41 700
2o8r-assembly1.cif.gz_B crystal structure of polyphosphate kinase from porphyromonas gingivalis 0.7879 45 700
ID Description Score Start End Superfamily
af_P9WHV9_55_158_1.20.58.310 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Polyphosphate kinase N-terminal domain 0.986 44 146 1.20.58.310
1xdoA04 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9748 516 694 3.30.870.10
af_P9WHV9_55_158_1.20.58.310 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Polyphosphate kinase N-terminal domain 0.9675 44 146 1.20.58.310
af_Q54BM7_872_1047_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9527 521 700 3.30.870.10
af_Q54BM7_872_1047_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9159 521 700 3.30.870.10
ID Description Score Start End GO Terms
AF-A0A355QWT1-F1-model_v4 deleted 0.9856 487 595
AF-A0A4S2RK11-F1-model_v4 RNA degradosome polyphosphate kinase 0.9798 489 656 GO:0006799
GO:0008976
GO:0009358
AF-G5SF29-F1-model_v4 Polyphosphate kinase 0.9792 520 612 GO:0006799
GO:0008976
GO:0009358
AF-A0A2M8PJT5-F1-model_v4 RNA degradosome polyphosphate kinase (EC 2.7.4.1) 0.9781 496 601 GO:0006799
GO:0008976
GO:0009358
AF-A0A538NXT3-F1-model_v4 RNA degradosome polyphosphate kinase (EC 2.7.4.1) 0.9764 497 698 GO:0006799
GO:0008976
GO:0009358

Map