F337442

General Info

Members Datasets Scaffolds Average Seq Length
225 155 450 603

Family's Representative Sequence

Representative Sequence 3300005335|Ga0070666_10023097|Ga0070666_100230972
Length 654
Sequence MLLAPDKSKRESIDVRIIDLVIFYVKIIPVSIVLFGKTRQNRILCERLTIMVCHKKLSILLIFLLGYCMSFAQTAQLPTPWTNTAIQAAVPLPEYPRPQMERDEWMCLNGKWDYRGGKEAPDALQPLKPASFEGVTGKILVPYCPESFLSGVRRKQEINMWYRRTIEIPASWKNKQVVLHFGAVDHDATVFLNGEKVGSHAGGYDAFEFNITPFLKKGANTLIVAAHDPNDGTTPSGKNGPRGDYAFSSGIWQTVWMEPVSVNYIKSIRVLPDVEGRRLKILINGGANGKVTAVALANGKTISQVAAGTGAAFYLPIENPVLWSPDSPFLYDLKLTLYNADGSFADVVKSYFGMRDIRLGKLNGVIRPFINGKFIMQLGLLDQGYWPDGVLTAPTDEALKFDMLYTKKAGYNLIRKHMKTEPQRFYYWADKLGLFIWQDMPAIWYQHDDTARNRSTFRKELKAIIDDHYNSPSIITWVPFNENWGAFDVREITDWVRQYDPSRLVNGNSGFNNNPDYQKPYGDPGNGDYVDTHIYIGPYGASVPDDHRAASLGEFGGVGLFTRGHMWPVENNAYAYEPTGTALTDRYVLLLQQVEQLMKYQGLSVAIYTQTTDVEHEVNGILTYDRVTEKMQLNRIWKANDAVIRDGEKMNDRH

Samples

Sample ID Description Type Environment
1 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
9 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
14 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
15 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
16 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
17 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
18 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
19 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
20 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
21 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
22 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
47 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
48 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
49 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
50 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
53 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
54 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
56 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
57 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
59 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
63 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
65 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
78 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
79 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
80 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
81 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
82 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
85 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
86 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
87 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
88 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
89 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
92 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
93 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
94 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
95 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
96 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
97 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
98 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
99 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
100 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
101 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
102 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
103 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
104 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
105 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
106 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
107 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
108 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
109 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
110 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
111 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
112 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
113 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
114 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
115 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
116 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
117 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
118 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
119 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
120 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
121 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
122 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
123 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
124 2508501039 Frankia saprophytica CN3 Isolate Nodule
125 2517572101 Frankia sp. DC12 Isolate Nodule
126 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
127 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
128 2687453737 Frankia sp. BMG5.36 Isolate Nodule
129 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
130 2738541302 Pedobacter sp. CF074 Isolate Unclassified
131 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
132 2818991437 Pedobacter terrae 518 Isolate Unclassified
133 2818991440 Luteibacter yeojuensis 583 Isolate Unclassified
134 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
135 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
136 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
137 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
138 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
139 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
140 2904463128 Luteibacter yeojuensis 3191 Isolate Unclassified
141 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
142 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
143 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
144 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
145 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
146 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
147 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
148 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
149 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
150 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
151 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
152 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
153 8002775197 Frankia nepalensis CN7 Isolate Nodule
154 8002784119 Frankia sp. AgB1.9 Isolate Nodule
155 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 85.78
Metatranscriptomes 0
Isolates 14.22

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.44
Nodule 3.11
Rhizoplane 0.89
Rhizosphere 55.11
Stem 0
Stem Tuber 0
Unclassified 0.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070666_10023097 3300005335 Unclassified 4045
2 SwRhRL2b_contig_1178953 2162886007 Bacteria 7199
3 JGI24740J21852_10000520 3300001979 Bacteria 16552
4 JGI24735J21928_10000016 3300002067 Bacteria 157028
5 JGI25162J39368_1000056 3300002737 Bacteria 146755
6 JGI25162J39368_1001137 3300002737 Bacteria 16000
7 JGI25157J39369_1002845 3300002741 Bacteria 3907
8 JGI25165J46597_1000669 3300003214 Bacteria 27650
9 JGI25153J46596_10008689 3300003215 Bacteria 4824
10 rootH1_10009206 3300003316 Bacteria 8141
11 rootH2_10003831 3300003320 Bacteria 43674
12 rootH2_10011870 3300003320 Bacteria 37797
13 rootH2_10018581 3300003320 Bacteria 12410
14 rootH2_10057371 3300003320 Bacteria 7483
15 rootH2_10229935 3300003320 Bacteria 4945
16 rootL2_10013689 3300003322 Bacteria 3671
17 rootL2_10036829 3300003322 Bacteria 5426
18 rootL2_10042845 3300003322 Bacteria 10085
19 rootL2_10072237 3300003322 Bacteria 6385
20 rootH1_10002072 3300003323 Bacteria 48496
21 rootH1_10005159 3300003323 Bacteria 13842
22 JGI25160J50197_1000800 3300003354 Bacteria 16955
23 JGI25160J50197_1004107 3300003354 Bacteria 6344
24 Ga0055542_1001954 3300003762 Bacteria 8019
25 Ga0055526_1008571 3300003771 Bacteria 5070
26 Ga0055536_1000009 3300003781 Bacteria 311572
27 Ga0055528_1001292 3300003790 Bacteria 15732
28 Ga0055530_10007155 3300003791 Bacteria 4776
29 Ga0055531_10000141 3300003794 Bacteria 82592
30 Ga0065165_1000493 3300005262 Bacteria 60949
31 Ga0065165_1008650 3300005262 Bacteria 4717
32 Ga0065714_10002216 3300005288 Bacteria 50392
33 Ga0065714_10008237 3300005288 Bacteria 7979
34 Ga0065704_10000356 3300005289 Bacteria 57976
35 Ga0070659_100018809 3300005366 Bacteria 5216
36 Ga0068853_100011032 3300005539 Bacteria 7328
37 Ga0070665_100000041 3300005548 Bacteria 297849
38 Ga0068855_100061042 3300005563 Bacteria 4405
39 Ga0068857_100124534 3300005577 Bacteria 2322
40 Ga0068856_100075603 3300005614 Bacteria 3336
41 Ga0068860_100000137 3300005843 Bacteria 119626
42 Ga0075366_10007195 3300006195 Bacteria 6132
43 Ga0105240_10000044 3300009093 Bacteria 250257
44 Ga0105240_10000054 3300009093 Bacteria 225529
45 Ga0105240_10000424 3300009093 Bacteria 78228
46 Ga0105240_10009778 3300009093 Bacteria 13539
47 Ga0105240_10015558 3300009093 Bacteria 10340
48 Ga0105240_10049392 3300009093 Bacteria 5310
49 Ga0105243_10000074 3300009148 Bacteria 112549
50 Ga0105241_10006411 3300009174 Bacteria 8674
51 Ga0105241_10098883 3300009174 Bacteria 2316
52 Ga0105248_10000085 3300009177 Bacteria 108204
53 Ga0105237_10000059 3300009545 Bacteria 146569
54 Ga0105237_10000065 3300009545 Bacteria 139423
55 Ga0105237_10001742 3300009545 Bacteria 28101
56 Ga0105237_10003233 3300009545 Bacteria 19486
57 Ga0105237_10012099 3300009545 Bacteria 9109
58 Ga0105238_10022176 3300009551 Bacteria 6476
59 Ga0105238_10047283 3300009551 Bacteria 4340
60 Ga0105239_10000049 3300010375 Bacteria 177578
61 Ga0105239_10000146 3300010375 Bacteria 101177
62 Ga0105239_10000355 3300010375 Bacteria 67024
63 Ga0105239_10008549 3300010375 Bacteria 11624
64 Ga0105239_10055436 3300010375 Bacteria 4347
65 Ga0157373_10000312 3300013100 Bacteria 39303
66 Ga0157373_10004838 3300013100 Bacteria 10132
67 Ga0157373_10016110 3300013100 Bacteria 5456
68 Ga0157371_10000051 3300013102 Bacteria 180272
69 Ga0157371_10002647 3300013102 Bacteria 16981
70 Ga0157371_10003746 3300013102 Bacteria 13612
71 Ga0157370_10018671 3300013104 Bacteria 6972
72 Ga0157370_10035928 3300013104 Bacteria 4812
73 Ga0157370_10144881 3300013104 Bacteria 2212
74 Ga0157369_10000002 3300013105 Bacteria 524510
75 Ga0157374_10000004 3300013296 Bacteria 759774
76 Ga0157378_10038171 3300013297 Bacteria 4256
77 Ga0163162_10006018 3300013306 Bacteria 11743
78 Ga0163162_10022463 3300013306 Bacteria 6215
79 Ga0157372_10001731 3300013307 Bacteria 23669
80 Ga0157372_10005184 3300013307 Bacteria 13859
81 Ga0182008_10000012 3300014497 Bacteria 297475
82 Ga0182008_10000491 3300014497 Bacteria 29764
83 Ga0157376_10000690 3300014969 Bacteria 21813
84 Ga0157376_10004888 3300014969 Bacteria 9338
85 Ga0182006_1000159 3300015261 Bacteria 72265
86 Ga0182007_10000001 3300015262 Bacteria 1127301
87 Ga0182005_1001901 3300015265 Bacteria 7913
88 Ga0163161_10002105 3300017792 Bacteria 14405
89 Ga0163161_10044754 3300017792 Bacteria 3189
90 Ga0163161_10072101 3300017792 Bacteria 2529
91 Ga0207427_100060 3300025231 Bacteria 186274
92 Ga0209437_100021 3300025233 Bacteria 646400
93 Ga0209437_100124 3300025233 Bacteria 199789
94 Ga0209258_100303 3300025242 Bacteria 79506
95 Ga0209646_1000005 3300025246 Bacteria 717627
96 Ga0209026_1000371 3300025250 Bacteria 41375
97 Ga0209148_1000329 3300025254 Bacteria 65492
98 Ga0209233_1000035 3300025261 Bacteria 568478
99 Ga0209233_1002317 3300025261 Bacteria 7097
100 Ga0209673_1000517 3300025273 Bacteria 63164
101 Ga0209676_1000001 3300025292 Bacteria 1852142
102 Ga0209564_1001840 3300025295 Bacteria 19415
103 Ga0209758_1002123 3300025297 Bacteria 20929
104 Ga0209758_1008288 3300025297 Bacteria 6791
105 Ga0209050_1000018 3300025298 Bacteria 723263
106 Ga0209050_1001531 3300025298 Bacteria 24311
107 Ga0207426_1000002 3300025302 Bacteria 1249660
108 Ga0207426_1000150 3300025302 Bacteria 186352
109 Ga0207426_1007371 3300025302 Bacteria 4614
110 Ga0209257_1000064 3300025304 Bacteria 356803
111 Ga0209257_1002201 3300025304 Bacteria 20163
112 Ga0209257_1015200 3300025304 Bacteria 3226
113 Ga0207680_10018299 3300025903 Unclassified 3721
114 Ga0207647_10000249 3300025904 Bacteria 44055
115 Ga0207654_10012424 3300025911 Bacteria 4364
116 Ga0207654_10064154 3300025911 Bacteria 2158
117 Ga0207695_10000013 3300025913 Bacteria 821265
118 Ga0207695_10000043 3300025913 Bacteria 444585
119 Ga0207695_10000394 3300025913 Bacteria 98403
120 Ga0207695_10000546 3300025913 Bacteria 78237
121 Ga0207671_10000064 3300025914 Bacteria 169693
122 Ga0207671_10000378 3300025914 Bacteria 63134
123 Ga0207671_10006998 3300025914 Bacteria 9893
124 Ga0207671_10010960 3300025914 Bacteria 7427
125 Ga0207671_10012951 3300025914 Bacteria 6675
126 Ga0207709_10000033 3300025935 Bacteria 320483
127 Ga0207711_10000563 3300025941 Bacteria 37793
128 Ga0207667_10026512 3300025949 Bacteria 6330
129 Ga0207702_10049111 3300026078 Bacteria 3560
130 Ga0268266_10000014 3300028379 Bacteria 644033
131 Ga0268264_10000189 3300028381 Bacteria 128203
132 Ga0307517_10007805 3300028786 Bacteria 15517
133 Ga0307515_10001172 3300028794 Bacteria 59936
134 Ga0307515_10002462 3300028794 Bacteria 40261
135 Ga0316183_1212383 3300030742 Bacteria 20019
136 Ga0316181_1002348 3300030744 Bacteria 17767
137 Ga0307405_10000003 3300031731 Bacteria 569064
138 Ga0307407_10000008 3300031903 Bacteria 191228
139 Ga0307412_10000049 3300031911 Bacteria 151588
140 Ga0307416_100000009 3300032002 Bacteria 374271
141 Ga0307414_10002659 3300032004 Bacteria 9399
142 Ga0307414_10003841 3300032004 Bacteria 8081
143 Ga0307510_10007695 3300033180 Bacteria 12846
144 Ga0451807_0194039 3300041486 Bacteria 1592
145 Ga0466972_0000027 3300044658 Bacteria 174082
146 Ga0466972_0003236 3300044658 Bacteria 8075
147 Ga0466970_0000097 3300044765 Bacteria 37675
148 Ga0451576_0000043 3300045051 Bacteria 335666
149 Ga0495650_0000277 3300046471 Bacteria 98027
150 Ga0495585_0000088 3300046492 Bacteria 96490
151 Ga0495585_0004492 3300046492 Bacteria 9035
152 Ga0495606_0000033 3300046507 Bacteria 247739
153 Ga0495606_0005248 3300046507 Bacteria 12494
154 Ga0495606_0021445 3300046507 Bacteria 4732
155 Ga0495610_0003991 3300046512 Bacteria 11143
156 Ga0495616_0004096 3300046513 Bacteria 9246
157 Ga0495648_0002896 3300046524 Bacteria 15432
158 Ga0495633_0005822 3300046558 Bacteria 7430
159 Ga0495668_0000643 3300046616 Bacteria 42003
160 Ga0495611_0000595 3300046648 Bacteria 20863
161 Ga0495625_0000048 3300046660 Bacteria 198976
162 Ga0495625_0001376 3300046660 Bacteria 29917
163 Ga0495625_0008419 3300046660 Bacteria 8807
164 Ga0495661_0006014 3300046665 Bacteria 8563
165 Ga0495661_0018833 3300046665 Bacteria 4533
166 Ga0495649_0000059 3300046694 Bacteria 98956
167 Ga0495660_0012319 3300046810 Bacteria 4961
168 Ga0495687_001023 3300047443 Bacteria 27860
169 Ga0495686_0000402 3300047472 Bacteria 68501
170 Ga0496116_0001239 3300048919 Bacteria 29627
171 Ga0496116_0017319 3300048919 Bacteria 5595
172 Ga0496117_0002226 3300048920 Bacteria 25072
173 Ga0496117_0012833 3300048920 Bacteria 7348
174 Ga0496118_0010445 3300048921 Bacteria 9196
175 Ga0496118_0011872 3300048921 Bacteria 8440
176 Ga0496119_0018295 3300048922 Bacteria 5227
177 Ga0496121_0000028 3300048924 Bacteria 439193
178 Ga0496124_0141284 3300048927 Bacteria 1900
179 Ga0496125_0000029 3300048928 Bacteria 382675
180 Ga0496126_0039977 3300048929 Bacteria 4349
181 Ga0496126_0152498 3300048929 Bacteria 1980
182 Ga0495678_004209 3300049459 Bacteria 8456
183 nmdc:mga0k408_439_c1 3300050493 Bacteria 12343
184 Ga0500562_010583 3300053108 Bacteria 2340
185 Ga0500608_000586 3300053122 Bacteria 13374
186 Ga0500618_000023 3300053125 Bacteria 152444
187 Ga0500658_0008376 3300053134 Bacteria 3822
188 Ga0500577_0000863 3300053142 Bacteria 7834
189 Ga0500604_0021425 3300053151 Bacteria 1827
190 Ga0500616_0005489 3300053153 Bacteria 8604
191 Ga0500622_0000409 3300053156 Bacteria 40793
192 Ga0500622_0000731 3300053156 Bacteria 28694
193 Ga0500622_0008401 3300053156 Bacteria 5778
194 2508676840 2508501039 Bacteria 9978592
195 2517759525 2517572101 Bacteria 6884336
196 2599478948 2599185184 Bacteria 6430550
197 2676201822 2675902999 Bacteria 9438463
198 2689960762 2687453737 Bacteria 11203906
199 2722729958 2721755487 Bacteria 6357185
200 2738856686 2738541302 Bacteria 5944758
201 2774846398 2773857921 Bacteria 9435764
202 2819546140 2818991437 Bacteria 5805520
203 2819562798 2818991440 Bacteria 4774720
204 2819577406 2818991442 Bacteria 8318214
205 2821139679 2821136567 Bacteria 8080116
206 2842724987 2842722452 Bacteria 6263924
207 2842903779 2842903701 Bacteria 6986368
208 2842914151 2842909656 Bacteria 6185908
209 2904446423 2904445276 Bacteria 5310396
210 2904463408 2904463128 Bacteria 4775606
211 2904473569 2904467357 Bacteria 8057758
212 2904783042 2904780799 Bacteria 5840761
213 2911141997 2911138879 Bacteria 5811561
214 2919179784 2919177583 Bacteria 5641607
215 2919443150 2919437846 Bacteria 6199444
216 2928082735 2928078545 Bacteria 6534839
217 2928153042 2928147474 Bacteria 6512076
218 2929245599 2929239360 Bacteria 7745570
219 2929927789 2929921140 Bacteria 8649150
220 2932086102 2932082852 Bacteria 6563563
221 2945999822 2945997725 Bacteria 6404843
222 2954016820 2954016120 Bacteria 6446024
223 8002777240 8002775197 Bacteria 10728764
224 8002789425 8002784119 Bacteria 9788632
225 8003151647 8003151029 Bacteria 8187759
226 Ga0070666_10023097
227 SwRhRL2b_contig_1178953
228 JGI24740J21852_10000520
229 JGI24735J21928_10000016
230 JGI25162J39368_1000056
231 JGI25162J39368_1001137
232 JGI25157J39369_1002845
233 JGI25165J46597_1000669
234 JGI25153J46596_10008689
235 rootH1_10009206
236 rootH2_10003831
237 rootH2_10011870
238 rootH2_10018581
239 rootH2_10057371
240 rootH2_10229935
241 rootL2_10013689
242 rootL2_10036829
243 rootL2_10042845
244 rootL2_10072237
245 rootH1_10002072
246 rootH1_10005159
247 JGI25160J50197_1000800
248 JGI25160J50197_1004107
249 Ga0055542_1001954
250 Ga0055526_1008571
251 Ga0055536_1000009
252 Ga0055528_1001292
253 Ga0055530_10007155
254 Ga0055531_10000141
255 Ga0065165_1000493
256 Ga0065165_1008650
257 Ga0065714_10002216
258 Ga0065714_10008237
259 Ga0065704_10000356
260 Ga0070659_100018809
261 Ga0068853_100011032
262 Ga0070665_100000041
263 Ga0068855_100061042
264 Ga0068857_100124534
265 Ga0068856_100075603
266 Ga0068860_100000137
267 Ga0075366_10007195
268 Ga0105240_10000044
269 Ga0105240_10000054
270 Ga0105240_10000424
271 Ga0105240_10009778
272 Ga0105240_10015558
273 Ga0105240_10049392
274 Ga0105243_10000074
275 Ga0105241_10006411
276 Ga0105241_10098883
277 Ga0105248_10000085
278 Ga0105237_10000059
279 Ga0105237_10000065
280 Ga0105237_10001742
281 Ga0105237_10003233
282 Ga0105237_10012099
283 Ga0105238_10022176
284 Ga0105238_10047283
285 Ga0105239_10000049
286 Ga0105239_10000146
287 Ga0105239_10000355
288 Ga0105239_10008549
289 Ga0105239_10055436
290 Ga0157373_10000312
291 Ga0157373_10004838
292 Ga0157373_10016110
293 Ga0157371_10000051
294 Ga0157371_10002647
295 Ga0157371_10003746
296 Ga0157370_10018671
297 Ga0157370_10035928
298 Ga0157370_10144881
299 Ga0157369_10000002
300 Ga0157374_10000004
301 Ga0157378_10038171
302 Ga0163162_10006018
303 Ga0163162_10022463
304 Ga0157372_10001731
305 Ga0157372_10005184
306 Ga0182008_10000012
307 Ga0182008_10000491
308 Ga0157376_10000690
309 Ga0157376_10004888
310 Ga0182006_1000159
311 Ga0182007_10000001
312 Ga0182005_1001901
313 Ga0163161_10002105
314 Ga0163161_10044754
315 Ga0163161_10072101
316 Ga0207427_100060
317 Ga0209437_100021
318 Ga0209437_100124
319 Ga0209258_100303
320 Ga0209646_1000005
321 Ga0209026_1000371
322 Ga0209148_1000329
323 Ga0209233_1000035
324 Ga0209233_1002317
325 Ga0209673_1000517
326 Ga0209676_1000001
327 Ga0209564_1001840
328 Ga0209758_1002123
329 Ga0209758_1008288
330 Ga0209050_1000018
331 Ga0209050_1001531
332 Ga0207426_1000002
333 Ga0207426_1000150
334 Ga0207426_1007371
335 Ga0209257_1000064
336 Ga0209257_1002201
337 Ga0209257_1015200
338 Ga0207680_10018299
339 Ga0207647_10000249
340 Ga0207654_10012424
341 Ga0207654_10064154
342 Ga0207695_10000013
343 Ga0207695_10000043
344 Ga0207695_10000394
345 Ga0207695_10000546
346 Ga0207671_10000064
347 Ga0207671_10000378
348 Ga0207671_10006998
349 Ga0207671_10010960
350 Ga0207671_10012951
351 Ga0207709_10000033
352 Ga0207711_10000563
353 Ga0207667_10026512
354 Ga0207702_10049111
355 Ga0268266_10000014
356 Ga0268264_10000189
357 Ga0307517_10007805
358 Ga0307515_10001172
359 Ga0307515_10002462
360 Ga0316183_1212383
361 Ga0316181_1002348
362 Ga0307405_10000003
363 Ga0307407_10000008
364 Ga0307412_10000049
365 Ga0307416_100000009
366 Ga0307414_10002659
367 Ga0307414_10003841
368 Ga0307510_10007695
369 Ga0451807_0194039
370 Ga0466972_0000027
371 Ga0466972_0003236
372 Ga0466970_0000097
373 Ga0451576_0000043
374 Ga0495650_0000277
375 Ga0495585_0000088
376 Ga0495585_0004492
377 Ga0495606_0000033
378 Ga0495606_0005248
379 Ga0495606_0021445
380 Ga0495610_0003991
381 Ga0495616_0004096
382 Ga0495648_0002896
383 Ga0495633_0005822
384 Ga0495668_0000643
385 Ga0495611_0000595
386 Ga0495625_0000048
387 Ga0495625_0001376
388 Ga0495625_0008419
389 Ga0495661_0006014
390 Ga0495661_0018833
391 Ga0495649_0000059
392 Ga0495660_0012319
393 Ga0495687_001023
394 Ga0495686_0000402
395 Ga0496116_0001239
396 Ga0496116_0017319
397 Ga0496117_0002226
398 Ga0496117_0012833
399 Ga0496118_0010445
400 Ga0496118_0011872
401 Ga0496119_0018295
402 Ga0496121_0000028
403 Ga0496124_0141284
404 Ga0496125_0000029
405 Ga0496126_0039977
406 Ga0496126_0152498
407 Ga0495678_004209
408 nmdc:mga0k408_439_c1
409 Ga0500562_010583
410 Ga0500608_000586
411 Ga0500618_000023
412 Ga0500658_0008376
413 Ga0500577_0000863
414 Ga0500604_0021425
415 Ga0500616_0005489
416 Ga0500622_0000409
417 Ga0500622_0000731
418 Ga0500622_0008401
419 2508676840
420 2517759525
421 2599478948
422 2676201822
423 2689960762
424 2722729958
425 2738856686
426 2774846398
427 2819546140
428 2819562798
429 2819577406
430 2821139679
431 2842724987
432 2842903779
433 2842914151
434 2904446423
435 2904463408
436 2904473569
437 2904783042
438 2911141997
439 2919179784
440 2919443150
441 2928082735
442 2928153042
443 2929245599
444 2929927789
445 2932086102
446 2945999822
447 2954016820
448 8002777240
449 8002789425
450 8003151647

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02837

Glyco_hydro_2_N

Glycosyl hydrolases family 2, sugar binding domain

141

259

0.9

PF22666

Glyco_hydro_2_N2

Glycosyl hydrolase 2 galactose-binding domain-like

137

254

0.88

PF02836

Glyco_hydro_2_C

Glycosyl hydrolases family 2, TIM barrel domain

388

521

0.81

PF00703

Glyco_hydro_2

Glycosyl hydrolases family 2

267

355

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
7sf2-assembly2.cif.gz_C crystal structure of beta-galactosidase from bacteroides cellulosilyticus 0.8824 26 602
7sf2-assembly2.cif.gz_C crystal structure of beta-galactosidase from bacteroides cellulosilyticus 0.8692 26 602
7xyr-assembly1.cif.gz_A cystal structure of beta-glucuronidase from bacteroides thetaiotaomicron 0.8362 48 599
7xyr-assembly1.cif.gz_A cystal structure of beta-glucuronidase from bacteroides thetaiotaomicron 0.8261 48 599
6jz4-assembly1.cif.gz_B b-glucuronidase from ruminococcus gnavus in complex with d-glucaro-d-lactam 0.7985 57 595
ID Description Score Start End Superfamily
3t0dA02 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8434 220 312 2.60.40.10
af_A1ZBG9_237_349_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8357 220 312 2.60.40.10
af_A0A1D6NGI9_1_90_2.60.120.260 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.8319 117 186 2.60.120.260
3ob8A02 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8312 220 312 2.60.40.10
5uj6B01 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.8121 62 218 2.60.120.260
ID Description Score Start End GO Terms
AF-A0A0J8SMP3-F1-model_v4 beta-galactosidase (EC 3.2.1.23) 0.9872 117 185 GO:0004565
GO:0005990
GO:0009341
AF-A0A191TPU3-F1-model_v4 Beta-glycosidase 0.9639 158 605 GO:0004553
GO:0005975
AF-A0A561HJ37-F1-model_v4 deleted 0.955 24 602
AF-A0A191TPU3-F1-model_v4 Beta-glycosidase 0.9473 158 605 GO:0004553
GO:0005975
AF-A0A7Y6M049-F1-model_v4 deleted 0.9365 475 602

Map