F338159

General Info

Members Datasets Scaffolds Average Seq Length
225 109 450 394

Family's Representative Sequence

Representative Sequence 3300048906|Ga0496103_0005694|Ga0496103_0005694_3253_4494
Length 413
Sequence MRAHPSPVSSIARRRPGSGGFSLVELMVSVVIGLLALVFATRLVVSGEQNKDAAVGGSDSMQNGMLALFSLSGDAADAGWGLNDTMLAGCDTVFSDNNGYQLATDQRGGANITPLAPVVIQSNGVNSDVVSFQSGSSQTAVGSTKLVTNYVPGESTLTVDSRNPYDFNVGDVLVVAPITPGARRCTLFQLSGFGIGVNGNQLQVASGADFPFNPQLGLTTAYPLNVSYIYNLGSARRLHFHTWSVQNGILRLRATDMPGSAQQGASVIDNVVSLKAQYGFDNRALADYDPNTPGNGAAQASTASGMRIGVWSSTMIDADNDGVVGGAGDYQRIGSVRLAVVARSKTAEKPDSSGQCRATTVQPTVFAGAAPATVAAAPVQVNVAVLGDTVDWKCYRYRVFETIVPIRNAQWRP

Samples

Sample ID Description Type Environment
1 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
4 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
5 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
6 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
7 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
8 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
9 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
10 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
11 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
12 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
13 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
14 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
15 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
16 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
17 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
18 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
19 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
20 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
21 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
22 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
23 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
24 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
26 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
27 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
28 3300044669 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2E Metagenome Unclassified
29 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
30 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
31 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
32 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
33 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
34 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
35 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
36 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
37 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
38 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
39 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
40 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
41 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
42 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
43 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
44 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
45 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
46 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
47 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
48 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
49 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
50 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
51 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
52 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
53 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
54 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
55 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
56 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
57 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
58 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
59 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
60 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
61 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
62 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
63 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
64 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
65 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
66 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
67 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
68 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
69 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
70 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
71 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
72 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
73 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
74 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
75 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
76 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
77 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
78 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
79 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
80 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
81 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
82 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
83 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
84 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
85 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
86 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
87 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
88 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
89 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
90 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
91 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
92 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
93 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
94 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
95 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
96 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
97 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
98 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
99 2738541297 Duganella sp. GV083 Isolate Unclassified
100 2738541357 Duganella sp. GV053 Isolate Unclassified
101 2738543003 Duganella sp. GV066 Isolate Unclassified
102 2738543026 Duganella sp. GV089 Isolate Unclassified
103 2738543029 Duganella sp. GV039 Isolate Unclassified
104 2821131069 Duganella sp. 1224 Isolate Unclassified
105 2842711865 Duganella sp. R-73148 Isolate Unclassified
106 2857553236 Duganella sp. R-74557 Isolate Unclassified
107 2857564685 Duganella sp. R-74599 Isolate Unclassified
108 2904424332 Duganella sp. 1411 Isolate Rhizosphere
109 2919476304 Duganella sp. 3397 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.11
Metatranscriptomes 0
Isolates 4.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.56
Nodule 1.33
Rhizoplane 1.78
Rhizosphere 76
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496103_0005694 3300048906 Bacteria 7447
2 rootL2_10256924 3300003322 Bacteria 2439
3 Ga0055526_1000320 3300003771 Bacteria 39805
4 Ga0055526_1000430 3300003771 Bacteria 33723
5 Ga0055526_1002009 3300003771 Bacteria 14004
6 Ga0055537_1000291 3300003773 Bacteria 35541
7 Ga0055524_1000003 3300003775 Bacteria 399748
8 Ga0055524_1007374 3300003775 Bacteria 4677
9 Ga0055534_1000582 3300003784 Bacteria 19190
10 Ga0055528_1000218 3300003790 Bacteria 48330
11 Ga0065165_1001934 3300005262 Bacteria 19743
12 Ga0065165_1014478 3300005262 Bacteria 3060
13 Ga0079104_1015849 3300006946 Bacteria 2220
14 Ga0099826_10000002 3300006948 Bacteria 1125830
15 Ga0105244_10001942 3300009036 Bacteria 16057
16 Ga0105244_10014059 3300009036 Bacteria 4646
17 Ga0182006_1000029 3300015261 Bacteria 247579
18 Ga0182005_1000037 3300015265 Bacteria 166102
19 Ga0213872_10000001 3300021361 Bacteria 662532
20 Ga0213872_10001662 3300021361 Bacteria 14019
21 Ga0213872_10002143 3300021361 Bacteria 11835
22 Ga0213872_10003046 3300021361 Bacteria 9454
23 Ga0207425_1000245 3300025245 Bacteria 41275
24 Ga0209646_1000051 3300025246 Bacteria 296525
25 Ga0209565_1000408 3300025263 Bacteria 35839
26 Ga0209565_1005067 3300025263 Bacteria 3888
27 Ga0209673_1000007 3300025273 Bacteria 634477
28 Ga0209675_1000009 3300025291 Bacteria 562872
29 Ga0209025_1002964 3300025294 Bacteria 16864
30 Ga0209564_1000011 3300025295 Bacteria 822327
31 Ga0209564_1000055 3300025295 Bacteria 343782
32 Ga0209564_1000089 3300025295 Bacteria 249694
33 Ga0209758_1002686 3300025297 Bacteria 17535
34 Ga0209256_1000007 3300025299 Bacteria 1136599
35 Ga0209256_1000849 3300025299 Bacteria 38168
36 Ga0207655_1022355 3300025728 Bacteria 3173
37 Ga0209282_1000001 3300027666 Bacteria 2450367
38 Ga0316181_1169042 3300030744 Bacteria 3469
39 Ga0436361_0119405 3300039447 Bacteria 20242
40 Ga0436361_0225876 3300039447 Bacteria 30906
41 Ga0436361_0333766 3300039447 Bacteria 15231
42 Ga0436361_0485085 3300039447 Bacteria 3179
43 Ga0436361_0609365 3300039447 Bacteria 10700
44 Ga0466981_0059530 3300044669 Bacteria 2749
45 Ga0466970_0020512 3300044765 Bacteria 3435
46 Ga0495617_000003 3300046452 Bacteria 541914
47 Ga0495617_004173 3300046452 Bacteria 5292
48 Ga0495627_000026 3300046453 Bacteria 238494
49 Ga0495627_000059 3300046453 Bacteria 142466
50 Ga0495603_0008097 3300046455 Bacteria 6350
51 Ga0495590_0000002 3300046457 Bacteria 485720
52 Ga0495591_023050 3300046458 Bacteria 2002
53 Ga0495629_0019819 3300046459 Bacteria 4800
54 Ga0495638_0001490 3300046460 Bacteria 21133
55 Ga0495638_0031305 3300046460 Bacteria 3420
56 Ga0495653_0000080 3300046463 Bacteria 80818
57 Ga0495650_0000019 3300046471 Bacteria 533849
58 Ga0495650_0000521 3300046471 Bacteria 56415
59 Ga0495650_0000618 3300046471 Bacteria 48166
60 Ga0495650_0000933 3300046471 Bacteria 33909
61 Ga0495650_0003036 3300046471 Bacteria 12670
62 Ga0495650_0007497 3300046471 Bacteria 6543
63 Ga0495650_0008412 3300046471 Bacteria 6025
64 Ga0495650_0009710 3300046471 Bacteria 5453
65 Ga0495605_0000028 3300046474 Bacteria 218471
66 Ga0495605_0004056 3300046474 Bacteria 8644
67 Ga0495605_0043642 3300046474 Bacteria 2221
68 Ga0495639_0037012 3300046475 Bacteria 2187
69 Ga0495584_0000133 3300046491 Bacteria 51161
70 Ga0495584_0003505 3300046491 Bacteria 8621
71 Ga0495585_0003339 3300046492 Bacteria 10889
72 Ga0495585_0011940 3300046492 Bacteria 5129
73 Ga0495585_0022719 3300046492 Bacteria 3600
74 Ga0495594_0136385 3300046499 Bacteria 1391
75 Ga0495607_0002450 3300046501 Bacteria 15091
76 Ga0495607_0002633 3300046501 Bacteria 14408
77 Ga0495607_0006093 3300046501 Bacteria 8529
78 Ga0495607_0097919 3300046501 Bacteria 1576
79 Ga0495583_0001748 3300046506 Bacteria 20746
80 Ga0495583_0004404 3300046506 Bacteria 10102
81 Ga0495583_0035039 3300046506 Bacteria 2400
82 Ga0495606_0000001 3300046507 Bacteria 592123
83 Ga0495606_0000601 3300046507 Bacteria 57004
84 Ga0495606_0003006 3300046507 Bacteria 18479
85 Ga0495606_0003203 3300046507 Bacteria 17645
86 Ga0495606_0003465 3300046507 Bacteria 16733
87 Ga0495606_0005903 3300046507 Bacteria 11513
88 Ga0495606_0006214 3300046507 Bacteria 11103
89 Ga0495606_0147911 3300046507 Bacteria 1381
90 Ga0495610_0000106 3300046512 Bacteria 97582
91 Ga0495610_0002283 3300046512 Bacteria 16194
92 Ga0495610_0002657 3300046512 Bacteria 14759
93 Ga0495610_0006161 3300046512 Bacteria 8341
94 Ga0495610_0006367 3300046512 Bacteria 8146
95 Ga0495610_0016216 3300046512 Bacteria 4299
96 Ga0495616_0000529 3300046513 Bacteria 28851
97 Ga0495616_0004919 3300046513 Bacteria 8346
98 Ga0495616_0005128 3300046513 Bacteria 8134
99 Ga0495616_0032110 3300046513 Bacteria 2745
100 Ga0495631_0001481 3300046518 Bacteria 14236
101 Ga0495631_0012628 3300046518 Bacteria 4120
102 Ga0495632_0000024 3300046519 Bacteria 179517
103 Ga0495632_0000913 3300046519 Bacteria 25920
104 Ga0495637_0000722 3300046520 Bacteria 22597
105 Ga0495637_0025976 3300046520 Bacteria 2635
106 Ga0495637_0030240 3300046520 Bacteria 2403
107 Ga0495643_0000244 3300046522 Bacteria 80746
108 Ga0495643_0000444 3300046522 Bacteria 53441
109 Ga0495643_0001965 3300046522 Bacteria 17240
110 Ga0495643_0147190 3300046522 Bacteria 1169
111 Ga0495644_0004962 3300046523 Bacteria 5216
112 Ga0495648_0001719 3300046524 Bacteria 21134
113 Ga0495648_0004060 3300046524 Bacteria 12633
114 Ga0495648_0042652 3300046524 Bacteria 2852
115 Ga0495648_0061127 3300046524 Bacteria 2239
116 Ga0495642_0000041 3300046528 Bacteria 76279
117 Ga0495642_0010949 3300046528 Bacteria 3476
118 Ga0495642_0030935 3300046528 Bacteria 2144
119 Ga0495642_0063289 3300046528 Bacteria 1537
120 Ga0495654_0000015 3300046530 Bacteria 307873
121 Ga0495654_0014408 3300046530 Bacteria 4208
122 Ga0495654_0049865 3300046530 Bacteria 2048
123 Ga0495665_0010063 3300046531 Bacteria 5124
124 Ga0495609_0000474 3300046538 Bacteria 32477
125 Ga0495609_0000555 3300046538 Bacteria 29466
126 Ga0495609_0001958 3300046538 Bacteria 13073
127 Ga0495609_0041195 3300046538 Bacteria 2076
128 Ga0495609_0069548 3300046538 Bacteria 1547
129 Ga0495597_0000070 3300046542 Bacteria 89649
130 Ga0495597_0001571 3300046542 Bacteria 16089
131 Ga0495597_0001823 3300046542 Bacteria 14576
132 Ga0495622_0000787 3300046557 Bacteria 17663
133 Ga0495622_0001840 3300046557 Bacteria 10471
134 Ga0495633_0001212 3300046558 Bacteria 20769
135 Ga0495633_0001627 3300046558 Bacteria 16959
136 Ga0495633_0004518 3300046558 Bacteria 8801
137 Ga0495633_0014031 3300046558 Bacteria 4201
138 Ga0495656_0005855 3300046615 Bacteria 4275
139 Ga0495668_0000036 3300046616 Bacteria 235057
140 Ga0495668_0000241 3300046616 Bacteria 78040
141 Ga0495668_0002077 3300046616 Bacteria 17353
142 Ga0495668_0002124 3300046616 Bacteria 17095
143 Ga0495668_0008981 3300046616 Bacteria 6171
144 Ga0495668_0010580 3300046616 Bacteria 5575
145 Ga0495611_0006676 3300046648 Bacteria 4908
146 Ga0495625_0002732 3300046660 Bacteria 18701
147 Ga0495625_0002965 3300046660 Bacteria 17642
148 Ga0495625_0008617 3300046660 Bacteria 8680
149 Ga0495625_0013517 3300046660 Bacteria 6553
150 Ga0495625_0016908 3300046660 Bacteria 5725
151 Ga0495625_0016909 3300046660 Bacteria 5725
152 Ga0495625_0019370 3300046660 Bacteria 5280
153 Ga0495661_0001861 3300046665 Bacteria 16864
154 Ga0495661_0008608 3300046665 Bacteria 7053
155 Ga0495661_0030162 3300046665 Bacteria 3455
156 Ga0495661_0033594 3300046665 Bacteria 3234
157 Ga0495588_0001090 3300046674 Bacteria 11743
158 Ga0495588_0003583 3300046674 Bacteria 6786
159 Ga0495588_0010861 3300046674 Bacteria 4254
160 Ga0495588_0020762 3300046674 Bacteria 3231
161 Ga0495669_0000055 3300046684 Bacteria 78120
162 Ga0495669_0002376 3300046684 Bacteria 7722
163 Ga0495669_0056229 3300046684 Bacteria 1773
164 Ga0495624_0005980 3300046690 Bacteria 8685
165 Ga0495670_0002743 3300046691 Bacteria 8701
166 Ga0495670_0022376 3300046691 Bacteria 3121
167 Ga0495671_0000006 3300046692 Bacteria 500471
168 Ga0495671_0018644 3300046692 Bacteria 3680
169 Ga0495649_0010445 3300046694 Bacteria 5476
170 Ga0495649_0033001 3300046694 Bacteria 2850
171 Ga0495589_0005322 3300046794 Bacteria 6796
172 Ga0495660_0001725 3300046810 Bacteria 14608
173 Ga0495660_0001884 3300046810 Bacteria 13776
174 Ga0495660_0002220 3300046810 Bacteria 12501
175 Ga0495660_0003962 3300046810 Bacteria 9045
176 Ga0495636_0001499 3300047318 Bacteria 8850
177 Ga0495636_0004416 3300047318 Bacteria 5505
178 Ga0495636_0010262 3300047318 Bacteria 3695
179 Ga0495674_0011827 3300047319 Bacteria 8228
180 Ga0495672_0002311 3300047320 Bacteria 17684
181 Ga0495683_0003388 3300047323 Bacteria 9311
182 Ga0495677_0001288 3300047445 Bacteria 10014
183 Ga0495677_0016664 3300047445 Bacteria 2667
184 Ga0495679_005732 3300047446 Bacteria 5472
185 Ga0495673_0000003 3300047469 Bacteria 1491337
186 Ga0495673_0000285 3300047469 Bacteria 68361
187 Ga0495673_0000351 3300047469 Bacteria 57305
188 Ga0495681_0004385 3300047470 Bacteria 9641
189 Ga0495681_0006778 3300047470 Bacteria 7453
190 Ga0495686_0015339 3300047472 Bacteria 5237
191 Ga0495615_0000330 3300048090 Bacteria 7903
192 Ga0495626_0001508 3300048091 Bacteria 18371
193 Ga0495626_0008679 3300048091 Bacteria 5548
194 Ga0495626_0068331 3300048091 Bacteria 1602
195 Ga0496102_0000033 3300048905 Bacteria 213952
196 Ga0496102_0007101 3300048905 Bacteria 9561
197 Ga0496103_0002777 3300048906 Bacteria 10895
198 Ga0496116_0037481 3300048919 Bacteria 3380
199 Ga0496116_0057725 3300048919 Bacteria 2536
200 Ga0496121_0020746 3300048924 Bacteria 6479
201 Ga0496122_0021809 3300048925 Bacteria 5717
202 Ga0496123_0008028 3300048926 Bacteria 9775
203 Ga0496124_0029025 3300048927 Bacteria 4936
204 Ga0496124_0041483 3300048927 Bacteria 3971
205 Ga0496126_0009957 3300048929 Bacteria 10038
206 Ga0495678_000030 3300049459 Bacteria 217986
207 Ga0495678_001616 3300049459 Bacteria 17222
208 Ga0495678_035051 3300049459 Bacteria 2060
209 Ga0495682_0011965 3300049460 Bacteria 3335
210 Ga0501238_001373 3300049671 Bacteria 2813
211 Ga0500594_0004240 3300053118 Bacteria 3162
212 Ga0500618_000265 3300053125 Bacteria 40554
213 Ga0500586_000076 3300053145 Bacteria 16957
214 Ga0500586_001484 3300053145 Bacteria 4964
215 2738830146 2738541297 Bacteria 6549566
216 2739153942 2738541357 Bacteria 6549408
217 2739195862 2738543003 Bacteria 6549560
218 2739322338 2738543026 Bacteria 6549408
219 2739340579 2738543029 Bacteria 6549249
220 2821132069 2821131069 Bacteria 6108407
221 2842712689 2842711865 Bacteria 7155354
222 2857557689 2857553236 Bacteria 6166726
223 2857568500 2857564685 Bacteria 6290584
224 2904425495 2904424332 Bacteria 7633521
225 2919477260 2919476304 Bacteria 5888696
226 Ga0496103_0005694
227 rootL2_10256924
228 Ga0055526_1000320
229 Ga0055526_1000430
230 Ga0055526_1002009
231 Ga0055537_1000291
232 Ga0055524_1000003
233 Ga0055524_1007374
234 Ga0055534_1000582
235 Ga0055528_1000218
236 Ga0065165_1001934
237 Ga0065165_1014478
238 Ga0079104_1015849
239 Ga0099826_10000002
240 Ga0105244_10001942
241 Ga0105244_10014059
242 Ga0182006_1000029
243 Ga0182005_1000037
244 Ga0213872_10000001
245 Ga0213872_10001662
246 Ga0213872_10002143
247 Ga0213872_10003046
248 Ga0207425_1000245
249 Ga0209646_1000051
250 Ga0209565_1000408
251 Ga0209565_1005067
252 Ga0209673_1000007
253 Ga0209675_1000009
254 Ga0209025_1002964
255 Ga0209564_1000011
256 Ga0209564_1000055
257 Ga0209564_1000089
258 Ga0209758_1002686
259 Ga0209256_1000007
260 Ga0209256_1000849
261 Ga0207655_1022355
262 Ga0209282_1000001
263 Ga0316181_1169042
264 Ga0436361_0119405
265 Ga0436361_0225876
266 Ga0436361_0333766
267 Ga0436361_0485085
268 Ga0436361_0609365
269 Ga0466981_0059530
270 Ga0466970_0020512
271 Ga0495617_000003
272 Ga0495617_004173
273 Ga0495627_000026
274 Ga0495627_000059
275 Ga0495603_0008097
276 Ga0495590_0000002
277 Ga0495591_023050
278 Ga0495629_0019819
279 Ga0495638_0001490
280 Ga0495638_0031305
281 Ga0495653_0000080
282 Ga0495650_0000019
283 Ga0495650_0000521
284 Ga0495650_0000618
285 Ga0495650_0000933
286 Ga0495650_0003036
287 Ga0495650_0007497
288 Ga0495650_0008412
289 Ga0495650_0009710
290 Ga0495605_0000028
291 Ga0495605_0004056
292 Ga0495605_0043642
293 Ga0495639_0037012
294 Ga0495584_0000133
295 Ga0495584_0003505
296 Ga0495585_0003339
297 Ga0495585_0011940
298 Ga0495585_0022719
299 Ga0495594_0136385
300 Ga0495607_0002450
301 Ga0495607_0002633
302 Ga0495607_0006093
303 Ga0495607_0097919
304 Ga0495583_0001748
305 Ga0495583_0004404
306 Ga0495583_0035039
307 Ga0495606_0000001
308 Ga0495606_0000601
309 Ga0495606_0003006
310 Ga0495606_0003203
311 Ga0495606_0003465
312 Ga0495606_0005903
313 Ga0495606_0006214
314 Ga0495606_0147911
315 Ga0495610_0000106
316 Ga0495610_0002283
317 Ga0495610_0002657
318 Ga0495610_0006161
319 Ga0495610_0006367
320 Ga0495610_0016216
321 Ga0495616_0000529
322 Ga0495616_0004919
323 Ga0495616_0005128
324 Ga0495616_0032110
325 Ga0495631_0001481
326 Ga0495631_0012628
327 Ga0495632_0000024
328 Ga0495632_0000913
329 Ga0495637_0000722
330 Ga0495637_0025976
331 Ga0495637_0030240
332 Ga0495643_0000244
333 Ga0495643_0000444
334 Ga0495643_0001965
335 Ga0495643_0147190
336 Ga0495644_0004962
337 Ga0495648_0001719
338 Ga0495648_0004060
339 Ga0495648_0042652
340 Ga0495648_0061127
341 Ga0495642_0000041
342 Ga0495642_0010949
343 Ga0495642_0030935
344 Ga0495642_0063289
345 Ga0495654_0000015
346 Ga0495654_0014408
347 Ga0495654_0049865
348 Ga0495665_0010063
349 Ga0495609_0000474
350 Ga0495609_0000555
351 Ga0495609_0001958
352 Ga0495609_0041195
353 Ga0495609_0069548
354 Ga0495597_0000070
355 Ga0495597_0001571
356 Ga0495597_0001823
357 Ga0495622_0000787
358 Ga0495622_0001840
359 Ga0495633_0001212
360 Ga0495633_0001627
361 Ga0495633_0004518
362 Ga0495633_0014031
363 Ga0495656_0005855
364 Ga0495668_0000036
365 Ga0495668_0000241
366 Ga0495668_0002077
367 Ga0495668_0002124
368 Ga0495668_0008981
369 Ga0495668_0010580
370 Ga0495611_0006676
371 Ga0495625_0002732
372 Ga0495625_0002965
373 Ga0495625_0008617
374 Ga0495625_0013517
375 Ga0495625_0016908
376 Ga0495625_0016909
377 Ga0495625_0019370
378 Ga0495661_0001861
379 Ga0495661_0008608
380 Ga0495661_0030162
381 Ga0495661_0033594
382 Ga0495588_0001090
383 Ga0495588_0003583
384 Ga0495588_0010861
385 Ga0495588_0020762
386 Ga0495669_0000055
387 Ga0495669_0002376
388 Ga0495669_0056229
389 Ga0495624_0005980
390 Ga0495670_0002743
391 Ga0495670_0022376
392 Ga0495671_0000006
393 Ga0495671_0018644
394 Ga0495649_0010445
395 Ga0495649_0033001
396 Ga0495589_0005322
397 Ga0495660_0001725
398 Ga0495660_0001884
399 Ga0495660_0002220
400 Ga0495660_0003962
401 Ga0495636_0001499
402 Ga0495636_0004416
403 Ga0495636_0010262
404 Ga0495674_0011827
405 Ga0495672_0002311
406 Ga0495683_0003388
407 Ga0495677_0001288
408 Ga0495677_0016664
409 Ga0495679_005732
410 Ga0495673_0000003
411 Ga0495673_0000285
412 Ga0495673_0000351
413 Ga0495681_0004385
414 Ga0495681_0006778
415 Ga0495686_0015339
416 Ga0495615_0000330
417 Ga0495626_0001508
418 Ga0495626_0008679
419 Ga0495626_0068331
420 Ga0496102_0000033
421 Ga0496102_0007101
422 Ga0496103_0002777
423 Ga0496116_0037481
424 Ga0496116_0057725
425 Ga0496121_0020746
426 Ga0496122_0021809
427 Ga0496123_0008028
428 Ga0496124_0029025
429 Ga0496124_0041483
430 Ga0496126_0009957
431 Ga0495678_000030
432 Ga0495678_001616
433 Ga0495678_035051
434 Ga0495682_0011965
435 Ga0501238_001373
436 Ga0500594_0004240
437 Ga0500618_000265
438 Ga0500586_000076
439 Ga0500586_001484
440 2738830146
441 2739153942
442 2739195862
443 2739322338
444 2739340579
445 2821132069
446 2842712689
447 2857557689
448 2857568500
449 2904425495
450 2919477260

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07963

N_methyl

Prokaryotic N-terminal methylation motif

15

41

0.89

PF16074

PilW

Type IV Pilus-assembly protein W

242

408

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ret-assembly1.cif.gz_D the crystal structure of a binary complex of two pseudopilins: epsi and epsj from the type 2 secretion system of vibrio vulnificus 0.6651 224 315
3nje-assembly1.cif.gz_A structure of the minor pseudopilin xcpw from the pseudomonas aeruginosa type ii secretion system 0.6195 225 315
6xby-assembly1.cif.gz_F cryo-em structure of v-atpase from bovine brain, state 2 0.606 128 221
7uzi-assembly1.cif.gz_F rat kidney v-atpase lacking subunit h, with sidk and ncoa7b, state 2 0.6052 130 221
6utu-assembly1.cif.gz_B crystal structure of minor pseudopilin ternary complex of xcpvwx from the type 2 secretion system of pseudomonas aeruginosa in the p3 space group 0.5989 224 315
ID Description Score Start End Superfamily
af_Q2G2I9_16_116_3.30.700.10 Alpha Beta;2-Layer Sandwich;Glycoprotein, Type 4 Pilin;Glycoprotein, Type 4 Pilin 0.7143 227 263 3.30.700.10
af_O96252_32_131_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.5763 129 218 2.40.30.20
af_Q4DRS8_153_366_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.5026 133 218 3.40.50.2000
af_P08371_29_187_3.30.700.10 Alpha Beta;2-Layer Sandwich;Glycoprotein, Type 4 Pilin;Glycoprotein, Type 4 Pilin 0.4922 32 318 3.30.700.10
af_O96252_32_131_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.4533 129 218 2.40.30.20
ID Description Score Start End GO Terms
AF-A0A7Y6QSR1-F1-model_v4 PilW family protein 0.9688 1 389 GO:0016020
GO:0043683
AF-A0A7Y6QSR1-F1-model_v4 PilW family protein 0.9663 1 389 GO:0016020
GO:0043683
AF-A0A1H7P1H5-F1-model_v4 Type IV pilus assembly protein PilW 0.9453 1 389 GO:0016020
GO:0043683
AF-A0A1H7P1H5-F1-model_v4 Type IV pilus assembly protein PilW 0.9429 1 389 GO:0016020
GO:0043683
AF-A0A353HQH0-F1-model_v4 Pilus assembly protein PilW 0.9232 5 217 GO:0016020

Map