F338346

General Info

Members Datasets Scaffolds Average Seq Length
225 132 450 173

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2885080285|2885082054
Length 197
Sequence RACRPERHGPQVMGSCVRVAILGAESSGKSTLAAALAERYGTVWVPEYLREFVETQGRVPVAADQYGIARTQVEREAAAAAQARHFLFCDTTPLMTVVYSRHYFDGADARLAALADATHYDVTLVTAPDSPWVADGLQRESEAVRQLIYRLLLEELDARGIVYHVLHDSLEARLAQAAPLLRQALDAAPAFSSLRNT

Samples

Sample ID Description Type Environment
1 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
2 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
3 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
7 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
8 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
9 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
10 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
11 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
12 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
13 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
14 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
15 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
18 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
19 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
20 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
21 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
22 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
23 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
24 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
25 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
26 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
27 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
28 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
29 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
30 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
31 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
33 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
34 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
35 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
37 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
39 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
40 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
44 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
45 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
46 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
47 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
48 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
49 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
50 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
51 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
52 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
53 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
54 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
55 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
56 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
57 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
58 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
59 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
60 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
61 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
62 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
63 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
64 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
65 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
66 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
67 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
68 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
69 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
70 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
71 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
72 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
73 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
74 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
75 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
76 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
77 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
78 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
79 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
80 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
81 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
82 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
83 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
84 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
85 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
86 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
87 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
88 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
89 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
90 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
91 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
92 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
93 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
94 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
95 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
96 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
97 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
98 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
99 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
100 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
101 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
102 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
103 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
104 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
105 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
106 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
107 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
108 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
109 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
110 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
111 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
112 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
113 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
114 2643221638 Duganella sp. Root336D2 Isolate Unclassified
115 2643221645 Massilia sp. Root351 Isolate Unclassified
116 2643221664 Massilia sp. Root418 Isolate Unclassified
117 2738541280 Massilia sp. GV090 Isolate Unclassified
118 2738541297 Duganella sp. GV083 Isolate Unclassified
119 2738541300 Massilia sp. GV016 Isolate Unclassified
120 2738541357 Duganella sp. GV053 Isolate Unclassified
121 2738543003 Duganella sp. GV066 Isolate Unclassified
122 2738543018 Massilia sp. GV045 Isolate Unclassified
123 2738543026 Duganella sp. GV089 Isolate Unclassified
124 2738543029 Duganella sp. GV039 Isolate Unclassified
125 2738543030 Massilia sp. GV097 Isolate Unclassified
126 2821131069 Duganella sp. 1224 Isolate Unclassified
127 2842711865 Duganella sp. R-73148 Isolate Unclassified
128 2857553236 Duganella sp. R-74557 Isolate Unclassified
129 2857558681 Duganella sp. R-74565 Isolate Unclassified
130 2857564685 Duganella sp. R-74599 Isolate Unclassified
131 2904424332 Duganella sp. 1411 Isolate Rhizosphere
132 2919476304 Duganella sp. 3397 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.67
Metatranscriptomes 0
Isolates 9.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25.33
Nodule 0.44
Rhizoplane 1.33
Rhizosphere 56.44
Stem 0
Stem Tuber 0
Unclassified 0.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1019280 3300002773 Bacteria 1243
2 JGI25150J39212_1001913 3300002774 Bacteria 5470
3 JGI25159J45721_1000578 3300002987 Bacteria 16474
4 rootL2_10017748 3300003322 Bacteria 5466
5 rootL2_10042846 3300003322 Bacteria 2762
6 JGI25160J50197_1007092 3300003354 Bacteria 4428
7 JGI25161J50226_1000941 3300003374 Bacteria 10416
8 Ga0055529_1000392 3300003763 Bacteria 46822
9 Ga0055526_1000180 3300003771 Bacteria 55895
10 Ga0055526_1007711 3300003771 Bacteria 5527
11 Ga0055526_1014170 3300003771 Bacteria 3303
12 Ga0055537_1008711 3300003773 Bacteria 2313
13 Ga0055537_1010660 3300003773 Bacteria 1923
14 Ga0055537_1017577 3300003773 Bacteria 1171
15 Ga0055524_1001759 3300003775 Bacteria 11961
16 Ga0055534_1007678 3300003784 Bacteria 2535
17 Ga0055528_1003011 3300003790 Bacteria 8703
18 Ga0055530_10000516 3300003791 Bacteria 33586
19 Ga0055530_10004710 3300003791 Bacteria 6901
20 Ga0055530_10013068 3300003791 Bacteria 2855
21 Ga0055531_10004741 3300003794 Bacteria 8135
22 Ga0055531_10020260 3300003794 Bacteria 2641
23 Ga0055543_1000442 3300004625 Bacteria 25466
24 Ga0065165_1009718 3300005262 Bacteria 4262
25 Ga0075363_100065904 3300006048 Bacteria 1959
26 Ga0075362_10014343 3300006177 Bacteria 3196
27 Ga0079104_1002200 3300006946 Bacteria 10986
28 Ga0105244_10001306 3300009036 Bacteria 20398
29 Ga0105244_10001737 3300009036 Bacteria 17153
30 Ga0157371_10003342 3300013102 Bacteria 14624
31 Ga0163162_10039580 3300013306 Bacteria 4712
32 Ga0182008_10011403 3300014497 Bacteria 4729
33 Ga0182006_1000026 3300015261 Bacteria 253543
34 Ga0182006_1040355 3300015261 Bacteria 1838
35 Ga0182007_10027072 3300015262 Bacteria 1981
36 Ga0182005_1000007 3300015265 Bacteria 490994
37 Ga0163161_10076963 3300017792 Bacteria 2450
38 Ga0209436_100340 3300025208 Bacteria 21107
39 Ga0209436_103447 3300025208 Bacteria 4210
40 Ga0207425_1000059 3300025245 Bacteria 146258
41 Ga0207425_1000862 3300025245 Bacteria 14847
42 Ga0209565_1002001 3300025263 Bacteria 7918
43 Ga0209565_1003629 3300025263 Bacteria 4921
44 Ga0209565_1016762 3300025263 Bacteria 1622
45 Ga0209455_1000037 3300025272 Bacteria 464097
46 Ga0209673_1009892 3300025273 Bacteria 4080
47 Ga0209130_1000421 3300025284 Bacteria 45634
48 Ga0209130_1004050 3300025284 Bacteria 5804
49 Ga0209675_1008581 3300025291 Bacteria 3733
50 Ga0209564_1000009 3300025295 Bacteria 950196
51 Ga0209564_1000456 3300025295 Bacteria 69075
52 Ga0209564_1003740 3300025295 Bacteria 9941
53 Ga0209564_1011666 3300025295 Bacteria 3911
54 Ga0209564_1014259 3300025295 Bacteria 3318
55 Ga0209758_1000227 3300025297 Bacteria 120073
56 Ga0209050_1000046 3300025298 Bacteria 386466
57 Ga0209050_1000655 3300025298 Bacteria 53550
58 Ga0209050_1002478 3300025298 Bacteria 15691
59 Ga0209050_1002679 3300025298 Bacteria 14517
60 Ga0209256_1000145 3300025299 Bacteria 150609
61 Ga0209256_1002734 3300025299 Bacteria 13640
62 Ga0209256_1004542 3300025299 Bacteria 8638
63 Ga0207426_1002807 3300025302 Bacteria 10436
64 Ga0209051_1026393 3300025303 Bacteria 2342
65 Ga0209257_1000068 3300025304 Bacteria 341291
66 Ga0209257_1006716 3300025304 Bacteria 7274
67 Ga0207655_1002794 3300025728 Bacteria 13559
68 Ga0207655_1003554 3300025728 Bacteria 11543
69 Ga0307515_10389976 3300028794 Unclassified 1022
70 Ga0316177_1074125 3300030731 Bacteria 2644
71 Ga0316178_1059880 3300030735 Bacteria 1434
72 Ga0316180_1144376 3300030736 Bacteria 1583
73 Ga0316182_1305659 3300030745 Bacteria 2335
74 Ga0307408_100000336 3300031548 Bacteria 44613
75 Ga0307408_100005331 3300031548 Bacteria 8613
76 Ga0450904_000648 3300042139 Bacteria 6319
77 Ga0466965_0020574 3300044683 Bacteria 3173
78 Ga0495617_000037 3300046452 Bacteria 134553
79 Ga0495617_009908 3300046452 Bacteria 3267
80 Ga0495627_000007 3300046453 Bacteria 575915
81 Ga0495627_055250 3300046453 Bacteria 1185
82 Ga0495638_0172442 3300046460 Bacteria 1240
83 Ga0495638_0222595 3300046460 Bacteria 1054
84 Ga0495653_0000002 3300046463 Bacteria 507262
85 Ga0495653_0248418 3300046463 Bacteria 1182
86 Ga0495650_0000166 3300046471 Bacteria 146047
87 Ga0495650_0002595 3300046471 Bacteria 14207
88 Ga0495650_0009838 3300046471 Bacteria 5397
89 Ga0495650_0016006 3300046471 Bacteria 3820
90 Ga0495605_0000059 3300046474 Bacteria 146371
91 Ga0495605_0403553 3300046474 Bacteria 568
92 Ga0495584_0004819 3300046491 Bacteria 7209
93 Ga0495585_0006889 3300046492 Bacteria 7004
94 Ga0495585_0012417 3300046492 Bacteria 5018
95 Ga0495594_0022199 3300046499 Bacteria 3393
96 Ga0495607_0095027 3300046501 Bacteria 1607
97 Ga0495606_0000064 3300046507 Bacteria 183631
98 Ga0495606_0000156 3300046507 Bacteria 118821
99 Ga0495606_0000500 3300046507 Bacteria 63908
100 Ga0495606_0014697 3300046507 Bacteria 6087
101 Ga0495606_0030779 3300046507 Bacteria 3742
102 Ga0495606_0097321 3300046507 Bacteria 1798
103 Ga0495610_0000003 3300046512 Bacteria 1203910
104 Ga0495610_0001810 3300046512 Bacteria 18577
105 Ga0495610_0004685 3300046512 Bacteria 9995
106 Ga0495610_0011728 3300046512 Bacteria 5327
107 Ga0495610_0019667 3300046512 Bacteria 3770
108 Ga0495610_0082104 3300046512 Bacteria 1478
109 Ga0495631_0020105 3300046518 Bacteria 3124
110 Ga0495637_0000426 3300046520 Bacteria 30770
111 Ga0495637_0002639 3300046520 Bacteria 9810
112 Ga0495643_0000282 3300046522 Bacteria 72496
113 Ga0495648_0005475 3300046524 Bacteria 10540
114 Ga0495648_0012961 3300046524 Bacteria 6188
115 Ga0495648_0015425 3300046524 Bacteria 5550
116 Ga0495648_0052329 3300046524 Bacteria 2480
117 Ga0495648_0097107 3300046524 Bacteria 1635
118 Ga0495666_0006986 3300046526 Bacteria 5670
119 Ga0495642_0006346 3300046528 Bacteria 4532
120 Ga0495654_0000028 3300046530 Bacteria 223384
121 Ga0495654_0013995 3300046530 Bacteria 4279
122 Ga0495654_0018211 3300046530 Bacteria 3684
123 Ga0495609_0046105 3300046538 Bacteria 1952
124 Ga0495597_0001222 3300046542 Bacteria 19122
125 Ga0495597_0001331 3300046542 Bacteria 18015
126 Ga0495597_0005586 3300046542 Bacteria 6635
127 Ga0495597_0033326 3300046542 Bacteria 2333
128 Ga0495597_0126307 3300046542 Bacteria 1063
129 Ga0495597_0137774 3300046542 Bacteria 1008
130 Ga0495633_0008980 3300046558 Bacteria 5565
131 Ga0495633_0016296 3300046558 Bacteria 3835
132 Ga0495633_0035166 3300046558 Bacteria 2406
133 Ga0495633_0147448 3300046558 Bacteria 1087
134 Ga0495668_0000185 3300046616 Bacteria 92731
135 Ga0495668_0000363 3300046616 Bacteria 60009
136 Ga0495668_0008846 3300046616 Bacteria 6239
137 Ga0495611_0011808 3300046648 Bacteria 3706
138 Ga0495625_0003194 3300046660 Bacteria 16645
139 Ga0495625_0010970 3300046660 Bacteria 7438
140 Ga0495625_0017118 3300046660 Bacteria 5681
141 Ga0495625_0025950 3300046660 Bacteria 4434
142 Ga0495625_0629491 3300046660 Bacteria 641
143 Ga0495659_0000021 3300046664 Bacteria 73067
144 Ga0495659_0009108 3300046664 Bacteria 3165
145 Ga0495588_0051813 3300046674 Bacteria 2114
146 Ga0495588_0337226 3300046674 Bacteria 793
147 Ga0495623_0487350 3300046679 Bacteria 652
148 Ga0495670_0027882 3300046691 Bacteria 2799
149 Ga0495670_0124458 3300046691 Bacteria 1341
150 Ga0495671_0000001 3300046692 Bacteria 1169494
151 Ga0495671_0000102 3300046692 Bacteria 77849
152 Ga0495671_0010378 3300046692 Bacteria 5163
153 Ga0495671_0270520 3300046692 Bacteria 819
154 Ga0495649_0005633 3300046694 Bacteria 7914
155 Ga0495589_0228903 3300046794 Bacteria 872
156 Ga0495660_0001139 3300046810 Bacteria 18912
157 Ga0495660_0001223 3300046810 Bacteria 17911
158 Ga0495660_0007050 3300046810 Bacteria 6624
159 Ga0495660_0015206 3300046810 Bacteria 4447
160 Ga0495660_0182816 3300046810 Bacteria 1013
161 Ga0495581_0016761 3300047315 Bacteria 4258
162 Ga0495636_0166306 3300047318 Bacteria 995
163 Ga0495674_0044752 3300047319 Bacteria 3934
164 Ga0495672_0000187 3300047320 Bacteria 89789
165 Ga0495672_0000259 3300047320 Bacteria 73356
166 Ga0495676_0055855 3300047321 Bacteria 3127
167 Ga0495683_0011428 3300047323 Bacteria 4672
168 Ga0495683_0312227 3300047323 Bacteria 672
169 Ga0495677_0059663 3300047445 Bacteria 1413
170 Ga0495679_025372 3300047446 Bacteria 1982
171 Ga0495685_045334 3300047447 Bacteria 1498
172 Ga0495673_0000003 3300047469 Bacteria 1491337
173 Ga0495673_0000097 3300047469 Bacteria 182247
174 Ga0495673_0000100 3300047469 Bacteria 173962
175 Ga0495681_0028867 3300047470 Bacteria 2848
176 Ga0495686_0000675 3300047472 Bacteria 46177
177 Ga0495686_0017608 3300047472 Bacteria 4807
178 Ga0495686_0234801 3300047472 Bacteria 1037
179 Ga0495686_0396320 3300047472 Bacteria 742
180 Ga0496103_0063200 3300048906 Bacteria 2305
181 Ga0496114_0091666 3300048917 Bacteria 2581
182 Ga0496115_0323476 3300048918 Bacteria 1261
183 Ga0496116_0067654 3300048919 Bacteria 2280
184 Ga0496116_0133537 3300048919 Bacteria 1410
185 Ga0496116_0329555 3300048919 Bacteria 710
186 Ga0496121_0005726 3300048924 Bacteria 15777
187 Ga0496121_0174838 3300048924 Unclassified 1556
188 Ga0496122_0002622 3300048925 Bacteria 25187
189 Ga0496122_0058865 3300048925 Bacteria 2840
190 Ga0496122_0061785 3300048925 Bacteria 2747
191 Ga0496123_0055215 3300048926 Bacteria 2607
192 Ga0496124_0063659 3300048927 Bacteria 3080
193 Ga0496124_0116116 3300048927 Bacteria 2146
194 Ga0496125_0022759 3300048928 Bacteria 5808
195 Ga0496126_0008661 3300048929 Bacteria 10929
196 Ga0496126_0311314 3300048929 Bacteria 1296
197 Ga0496126_0405201 3300048929 Bacteria 1105
198 Ga0495678_000004 3300049459 Bacteria 532920
199 Ga0495678_000226 3300049459 Bacteria 65083
200 Ga0501269_000023 3300049766 Bacteria 53029
201 nmdc:mga03683_45750_c1 3300050489 Bacteria 1812
202 nmdc:mga03n38_66970_c1 3300050490 Bacteria 1651
203 Ga0500618_000108 3300053125 Bacteria 67640
204 Ga0500586_002024 3300053145 Bacteria 4459
205 2885082054 2885080285 Bacteria 6355622
206 2644026280 2643221603 Bacteria 6147767
207 2644215803 2643221638 Bacteria 6579467
208 2644254287 2643221645 Bacteria 7207331
209 2644358045 2643221664 Bacteria 7272945
210 2738741106 2738541280 Bacteria 6630198
211 2738829345 2738541297 Bacteria 6549566
212 2738845565 2738541300 Bacteria 6675882
213 2739153141 2738541357 Bacteria 6549408
214 2739195061 2738543003 Bacteria 6549560
215 2739276621 2738543018 Bacteria 6718814
216 2739321537 2738543026 Bacteria 6549408
217 2739339907 2738543029 Bacteria 6549249
218 2739345665 2738543030 Bacteria 6719714
219 2821131473 2821131069 Bacteria 6108407
220 2842714173 2842711865 Bacteria 7155354
221 2857554362 2857553236 Bacteria 6166726
222 2857559965 2857558681 Bacteria 6617694
223 2857564867 2857564685 Bacteria 6290584
224 2904426150 2904424332 Bacteria 7633521
225 2919478531 2919476304 Bacteria 5888696
226 JGI25152J39213_1019280
227 JGI25150J39212_1001913
228 JGI25159J45721_1000578
229 rootL2_10017748
230 rootL2_10042846
231 JGI25160J50197_1007092
232 JGI25161J50226_1000941
233 Ga0055529_1000392
234 Ga0055526_1000180
235 Ga0055526_1007711
236 Ga0055526_1014170
237 Ga0055537_1008711
238 Ga0055537_1010660
239 Ga0055537_1017577
240 Ga0055524_1001759
241 Ga0055534_1007678
242 Ga0055528_1003011
243 Ga0055530_10000516
244 Ga0055530_10004710
245 Ga0055530_10013068
246 Ga0055531_10004741
247 Ga0055531_10020260
248 Ga0055543_1000442
249 Ga0065165_1009718
250 Ga0075363_100065904
251 Ga0075362_10014343
252 Ga0079104_1002200
253 Ga0105244_10001306
254 Ga0105244_10001737
255 Ga0157371_10003342
256 Ga0163162_10039580
257 Ga0182008_10011403
258 Ga0182006_1000026
259 Ga0182006_1040355
260 Ga0182007_10027072
261 Ga0182005_1000007
262 Ga0163161_10076963
263 Ga0209436_100340
264 Ga0209436_103447
265 Ga0207425_1000059
266 Ga0207425_1000862
267 Ga0209565_1002001
268 Ga0209565_1003629
269 Ga0209565_1016762
270 Ga0209455_1000037
271 Ga0209673_1009892
272 Ga0209130_1000421
273 Ga0209130_1004050
274 Ga0209675_1008581
275 Ga0209564_1000009
276 Ga0209564_1000456
277 Ga0209564_1003740
278 Ga0209564_1011666
279 Ga0209564_1014259
280 Ga0209758_1000227
281 Ga0209050_1000046
282 Ga0209050_1000655
283 Ga0209050_1002478
284 Ga0209050_1002679
285 Ga0209256_1000145
286 Ga0209256_1002734
287 Ga0209256_1004542
288 Ga0207426_1002807
289 Ga0209051_1026393
290 Ga0209257_1000068
291 Ga0209257_1006716
292 Ga0207655_1002794
293 Ga0207655_1003554
294 Ga0307515_10389976
295 Ga0316177_1074125
296 Ga0316178_1059880
297 Ga0316180_1144376
298 Ga0316182_1305659
299 Ga0307408_100000336
300 Ga0307408_100005331
301 Ga0450904_000648
302 Ga0466965_0020574
303 Ga0495617_000037
304 Ga0495617_009908
305 Ga0495627_000007
306 Ga0495627_055250
307 Ga0495638_0172442
308 Ga0495638_0222595
309 Ga0495653_0000002
310 Ga0495653_0248418
311 Ga0495650_0000166
312 Ga0495650_0002595
313 Ga0495650_0009838
314 Ga0495650_0016006
315 Ga0495605_0000059
316 Ga0495605_0403553
317 Ga0495584_0004819
318 Ga0495585_0006889
319 Ga0495585_0012417
320 Ga0495594_0022199
321 Ga0495607_0095027
322 Ga0495606_0000064
323 Ga0495606_0000156
324 Ga0495606_0000500
325 Ga0495606_0014697
326 Ga0495606_0030779
327 Ga0495606_0097321
328 Ga0495610_0000003
329 Ga0495610_0001810
330 Ga0495610_0004685
331 Ga0495610_0011728
332 Ga0495610_0019667
333 Ga0495610_0082104
334 Ga0495631_0020105
335 Ga0495637_0000426
336 Ga0495637_0002639
337 Ga0495643_0000282
338 Ga0495648_0005475
339 Ga0495648_0012961
340 Ga0495648_0015425
341 Ga0495648_0052329
342 Ga0495648_0097107
343 Ga0495666_0006986
344 Ga0495642_0006346
345 Ga0495654_0000028
346 Ga0495654_0013995
347 Ga0495654_0018211
348 Ga0495609_0046105
349 Ga0495597_0001222
350 Ga0495597_0001331
351 Ga0495597_0005586
352 Ga0495597_0033326
353 Ga0495597_0126307
354 Ga0495597_0137774
355 Ga0495633_0008980
356 Ga0495633_0016296
357 Ga0495633_0035166
358 Ga0495633_0147448
359 Ga0495668_0000185
360 Ga0495668_0000363
361 Ga0495668_0008846
362 Ga0495611_0011808
363 Ga0495625_0003194
364 Ga0495625_0010970
365 Ga0495625_0017118
366 Ga0495625_0025950
367 Ga0495625_0629491
368 Ga0495659_0000021
369 Ga0495659_0009108
370 Ga0495588_0051813
371 Ga0495588_0337226
372 Ga0495623_0487350
373 Ga0495670_0027882
374 Ga0495670_0124458
375 Ga0495671_0000001
376 Ga0495671_0000102
377 Ga0495671_0010378
378 Ga0495671_0270520
379 Ga0495649_0005633
380 Ga0495589_0228903
381 Ga0495660_0001139
382 Ga0495660_0001223
383 Ga0495660_0007050
384 Ga0495660_0015206
385 Ga0495660_0182816
386 Ga0495581_0016761
387 Ga0495636_0166306
388 Ga0495674_0044752
389 Ga0495672_0000187
390 Ga0495672_0000259
391 Ga0495676_0055855
392 Ga0495683_0011428
393 Ga0495683_0312227
394 Ga0495677_0059663
395 Ga0495679_025372
396 Ga0495685_045334
397 Ga0495673_0000003
398 Ga0495673_0000097
399 Ga0495673_0000100
400 Ga0495681_0028867
401 Ga0495686_0000675
402 Ga0495686_0017608
403 Ga0495686_0234801
404 Ga0495686_0396320
405 Ga0496103_0063200
406 Ga0496114_0091666
407 Ga0496115_0323476
408 Ga0496116_0067654
409 Ga0496116_0133537
410 Ga0496116_0329555
411 Ga0496121_0005726
412 Ga0496121_0174838
413 Ga0496122_0002622
414 Ga0496122_0058865
415 Ga0496122_0061785
416 Ga0496123_0055215
417 Ga0496124_0063659
418 Ga0496124_0116116
419 Ga0496125_0022759
420 Ga0496126_0008661
421 Ga0496126_0311314
422 Ga0496126_0405201
423 Ga0495678_000004
424 Ga0495678_000226
425 Ga0501269_000023
426 nmdc:mga03683_45750_c1
427 nmdc:mga03n38_66970_c1
428 Ga0500618_000108
429 Ga0500586_002024
430 2885082054
431 2644026280
432 2644215803
433 2644254287
434 2644358045
435 2738741106
436 2738829345
437 2738845565
438 2739153141
439 2739195061
440 2739276621
441 2739321537
442 2739339907
443 2739345665
444 2821131473
445 2842714173
446 2857554362
447 2857559965
448 2857564867
449 2904426150
450 2919478531

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13521

AAA_28

AAA domain

18

173

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6gzo-assembly1.cif.gz_A crystal structure of nadr protein in complex with nad and amp-pnp 0.8334 4 168
1lw7-assembly1.cif.gz_A nadr protein from haemophilus influenzae 0.8242 4 169
6gye-assembly1.cif.gz_A crystal structure of nadr protein in complex with nr 0.824 4 171
6gyf-assembly1.cif.gz_A crystal structure of nadr protein in complex with nr 0.8163 4 171
6gye-assembly2.cif.gz_B crystal structure of nadr protein in complex with nr 0.8142 4 171
ID Description Score Start End Superfamily
af_P96394_152_310_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9404 5 163 3.40.50.300
af_P96394_152_310_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9235 5 163 3.40.50.300
af_Q55C83_3_170_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.921 5 164 3.40.50.300
af_Q55C83_3_170_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8739 5 164 3.40.50.300
1lw7A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8168 5 165 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A411WVI4-F1-model_v4 deleted 0.9842 2 171
AF-A0A1M7HBV7-F1-model_v4 Nicotinamide-nucleotide adenylyltransferase, NadR type 0.9755 2 169 GO:0016779
GO:0016887
AF-A0A3S5HM78-F1-model_v4 Nicotinamide-nucleotide adenylyltransferase 0.966 2 169 GO:0016779
AF-A0A212T0Z6-F1-model_v4 Nicotinamide riboside kinase 0.9603 1 169 GO:0016301
AF-A0A7X3G312-F1-model_v4 AAA family ATPase 0.9601 1 170

Map