F338347

General Info

Members Datasets Scaffolds Average Seq Length
225 176 450 469

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2886848708|2886849119
Length 514
Sequence NAVTGTIRATDAADAADAKDISDSPIATPDPKSSNAAPRTLYRKLVDSHTVATLDAQNVLLFCDLHLMNEYTSPQAFTGLREQGRGVPMPGQQVAVVSHIIPTHAVPSALRVIADPPSALQASNLKANCDRHGIRLFDTTDALQGIEHVVAPEHGMIRPGMVVICGDSHTTTYGALGALGFGIGTTEVEHVLATQTLVYRVARDMRIRVDGALPAGTTAKDLVLAIIGRIGAQGARGYVVEFCGTTIDALSVEARFTLCNMAVEAGARGALIAPDATAINYVLARCPDLAGEWREPALARWRTLRSDPGARFDAEHRFDAADIAPQVTWGTSPDQVAPIDGHAPDPARMAVGPARDSAERALRYTRLEAGAALAGTPIQHVFIGSCTNGRIEDLRAAAAVLRGSRVAPGVRAMVVPGSGAVRAMAEAEGLDRVFLDAGFEWRQPGCSMCLAMNDDVLADGIRCASTTNRNFEGRQGRGAITHLMSPAMAAAAAVTGRLTDVRRLPPVLGEESPR

Samples

Sample ID Description Type Environment
1 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
6 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
7 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
8 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
9 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
30 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
31 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
32 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
37 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
38 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
39 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
40 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
41 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
42 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
43 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
45 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
67 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
68 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
69 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
71 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
72 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
73 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
74 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
77 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
78 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
79 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
80 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
81 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
88 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
89 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
90 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
91 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
92 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
93 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
94 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
95 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
96 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
97 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
98 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
99 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
100 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
101 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
102 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
103 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
104 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
105 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
106 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
107 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
108 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
109 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
110 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
111 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
112 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
113 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
114 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
115 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
116 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
117 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
118 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
121 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
122 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
123 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
124 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
125 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
126 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
127 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
128 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
129 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
130 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
131 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
140 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
141 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
146 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
147 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
148 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
149 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
150 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
151 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
152 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
153 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
154 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
155 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
156 2643221609 Acidovorax sp. Root217 Isolate Unclassified
157 2671180115 Cedecea sp. NFIX57 Isolate Rhizoplane
158 2738543012 Acidovorax sp. CF301 Isolate Unclassified
159 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
160 2816332133 Acidovorax radicis 2721A Isolate Unclassified
161 2831864461 Roseateles noduli HZ7 Isolate Nodule
162 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
163 2855730933 Achromobacter sp. HZ28 Isolate Nodule
164 2855767633 Achromobacter sp. HZ34 Isolate Nodule
165 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
166 2858950400 Achromobacter sp. K91 Isolate Unclassified
167 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
168 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
169 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
170 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
171 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
172 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
173 2941479691
174 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
175 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere
176 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.44
Metatranscriptomes 0
Isolates 11.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.67
Nodule 4.89
Rhizoplane 2.22
Rhizosphere 51.11
Stem 0
Stem Tuber 0.44
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10011110 3300002459 Bacteria 1856
2 JGI25162J39368_1005544 3300002737 Bacteria 2429
3 JGI25151J46595_10000857 3300003187 Bacteria 24191
4 JGI25151J46595_10028050 3300003187 Bacteria 2247
5 rootL2_10001457 3300003322 Bacteria 117785
6 Ga0055526_1002634 3300003771 Bacteria 11990
7 Ga0055524_1000310 3300003775 Bacteria 46341
8 Ga0055524_1021610 3300003775 Bacteria 2126
9 Ga0055534_1000457 3300003784 Bacteria 23650
10 Ga0055531_10004193 3300003794 Bacteria 8890
11 Ga0055531_10016562 3300003794 Bacteria 3171
12 Ga0065165_1000170 3300005262 Bacteria 115389
13 Ga0065165_1000562 3300005262 Bacteria 55318
14 Ga0070683_100054414 3300005329 Bacteria 3711
15 Ga0070670_100006334 3300005331 Bacteria 10017
16 Ga0070677_10007596 3300005333 Bacteria 3625
17 Ga0070682_100072227 3300005337 Bacteria 2211
18 Ga0070675_100125412 3300005354 Bacteria 2184
19 Ga0070709_10006691 3300005434 Bacteria 6293
20 Ga0070713_100001594 3300005436 Bacteria 14532
21 Ga0070711_100004649 3300005439 Bacteria 8126
22 Ga0070681_10052839 3300005458 Bacteria 4052
23 Ga0068853_100001980 3300005539 Bacteria 15101
24 Ga0068855_100028595 3300005563 Bacteria 6669
25 Ga0068855_100164846 3300005563 Bacteria 2513
26 Ga0068857_100167077 3300005577 Bacteria 1999
27 Ga0068856_100012510 3300005614 Bacteria 8216
28 Ga0081455_10004576 3300005937 Bacteria 15448
29 Ga0081540_1021507 3300005983 Bacteria 3837
30 Ga0075364_10002831 3300006051 Bacteria 9764
31 Ga0075364_10019655 3300006051 Bacteria 4240
32 Ga0075364_10033727 3300006051 Bacteria 3298
33 Ga0075366_10015095 3300006195 Bacteria 4419
34 Ga0075366_10027013 3300006195 Bacteria 3366
35 Ga0075366_10062288 3300006195 Bacteria 2217
36 Ga0075370_10044928 3300006353 Bacteria 2497
37 Ga0075429_100004508 3300006880 Bacteria 11984
38 Ga0099823_1000176 3300006944 Bacteria 35142
39 Ga0079104_1000150 3300006946 Bacteria 97808
40 Ga0099826_10000021 3300006948 Bacteria 173580
41 Ga0105251_10022704 3300009011 Bacteria 3251
42 Ga0105240_10000250 3300009093 Bacteria 107111
43 Ga0105237_10092195 3300009545 Bacteria 3020
44 Ga0105238_10041948 3300009551 Bacteria 4634
45 Ga0157319_1000003 3300012497 Bacteria 397199
46 Ga0213872_10002251 3300021361 Bacteria 11524
47 Ga0207427_100551 3300025231 Bacteria 19055
48 Ga0209437_100272 3300025233 Bacteria 77336
49 Ga0209673_1020859 3300025273 Bacteria 2307
50 Ga0209130_1001008 3300025284 Bacteria 21864
51 Ga0209675_1000557 3300025291 Bacteria 27014
52 Ga0209675_1001151 3300025291 Bacteria 16117
53 Ga0209676_1003002 3300025292 Bacteria 10969
54 Ga0209025_1000003 3300025294 Bacteria 1366495
55 Ga0209025_1000371 3300025294 Bacteria 94612
56 Ga0209025_1000447 3300025294 Bacteria 80906
57 Ga0209564_1000003 3300025295 Bacteria 1585848
58 Ga0209050_1002848 3300025298 Bacteria 13718
59 Ga0209050_1008757 3300025298 Bacteria 5324
60 Ga0209256_1000150 3300025299 Bacteria 146086
61 Ga0209256_1000326 3300025299 Bacteria 81240
62 Ga0209256_1000344 3300025299 Bacteria 75635
63 Ga0209051_1000386 3300025303 Bacteria 62211
64 Ga0209051_1007084 3300025303 Bacteria 6199
65 Ga0209051_1013659 3300025303 Bacteria 3847
66 Ga0209257_1000318 3300025304 Bacteria 101186
67 Ga0209257_1000399 3300025304 Bacteria 85231
68 Ga0209257_1017235 3300025304 Bacteria 2860
69 Ga0207682_10005514 3300025893 Bacteria 5154
70 Ga0207707_10046024 3300025912 Bacteria 3800
71 Ga0207695_10000615 3300025913 Bacteria 71501
72 Ga0207671_10019633 3300025914 Bacteria 5164
73 Ga0207663_10008063 3300025916 Bacteria 5488
74 Ga0207657_10017121 3300025919 Bacteria 6965
75 Ga0207681_10120675 3300025923 Bacteria 1922
76 Ga0207694_10020719 3300025924 Bacteria 4978
77 Ga0207700_10034939 3300025928 Bacteria 3615
78 Ga0207664_10212585 3300025929 Bacteria 1674
79 Ga0207691_10044304 3300025940 Bacteria 4096
80 Ga0207667_10095916 3300025949 Bacteria 3061
81 Ga0207639_10009334 3300026041 Bacteria 6765
82 Ga0207702_10027490 3300026078 Bacteria 4724
83 Ga0207702_10075161 3300026078 Bacteria 2918
84 Ga0207674_10046805 3300026116 Bacteria 4439
85 Ga0207698_10001442 3300026142 Bacteria 13816
86 Ga0209281_1000050 3300027111 Bacteria 320102
87 Ga0209389_1022566 3300027296 Bacteria 5572
88 Ga0209282_1000019 3300027666 Bacteria 184034
89 Ga0209974_10005937 3300027876 Bacteria 4279
90 Ga0307517_10144767 3300028786 Bacteria 1653
91 Ga0307515_10005239 3300028794 Bacteria 26356
92 Ga0307515_10006245 3300028794 Bacteria 23915
93 Ga0307515_10006818 3300028794 Bacteria 22718
94 Ga0307515_10134723 3300028794 Bacteria 2694
95 Ga0265327_10002563 3300031251 Bacteria 18838
96 Ga0307513_10040435 3300031456 Bacteria 5156
97 Ga0307509_10012267 3300031507 Bacteria 10274
98 Ga0307408_100049863 3300031548 Bacteria 3008
99 Ga0307508_10000278 3300031616 Bacteria 62985
100 Ga0307514_10001051 3300031649 Bacteria 39603
101 Ga0307514_10003111 3300031649 Bacteria 16325
102 Ga0307514_10043042 3300031649 Bacteria 3548
103 Ga0307412_10000106 3300031911 Bacteria 67067
104 Ga0373933_0027255 3300035724 Bacteria 3289
105 Ga0373947_0007972 3300035725 Bacteria 6108
106 Ga0373937_0052715 3300036401 Bacteria 3731
107 Ga0373925_0036845 3300037068 Bacteria 3609
108 Ga0395899_0000598 3300037312 Bacteria 37911
109 Ga0395899_0013949 3300037312 Bacteria 6137
110 Ga0395899_0030628 3300037312 Bacteria 4045
111 Ga0395900_0165968 3300037418 Bacteria 2250
112 Ga0395898_0221299 3300037466 Bacteria 1805
113 Ga0395905_0000174 3300037471 Bacteria 104301
114 Ga0395905_0009460 3300037471 Bacteria 9520
115 Ga0395905_0009894 3300037471 Bacteria 9293
116 Ga0436361_0453075 3300039447 Bacteria 45859
117 Ga0451849_0487363 3300041505 Bacteria 4898
118 Ga0451853_0541487 3300041512 Bacteria 7715
119 Ga0450911_001085 3300042115 Bacteria 6833
120 Ga0439459_0000524 3300042438 Bacteria 5062
121 Ga0466969_0013333 3300044656 Bacteria 4326
122 Ga0466965_0009210 3300044683 Bacteria 4586
123 Ga0466966_0004556 3300044684 Bacteria 9132
124 Ga0453684_0120529 3300044712 Bacteria 3168
125 Ga0495596_0000064 3300046500 Bacteria 77744
126 Ga0495583_0001067 3300046506 Bacteria 30637
127 Ga0495583_0005837 3300046506 Bacteria 8217
128 Ga0495610_0000545 3300046512 Bacteria 37663
129 Ga0495616_0000974 3300046513 Bacteria 20508
130 Ga0495616_0001545 3300046513 Bacteria 15878
131 Ga0495620_0050249 3300046515 Bacteria 1780
132 Ga0495632_0033371 3300046519 Bacteria 2643
133 Ga0495637_0009838 3300046520 Bacteria 4649
134 Ga0495643_0000259 3300046522 Bacteria 77609
135 Ga0495663_0005745 3300046525 Bacteria 3435
136 Ga0495654_0005131 3300046530 Bacteria 7650
137 Ga0495609_0000244 3300046538 Bacteria 51384
138 Ga0495621_0001901 3300046539 Bacteria 5486
139 Ga0495597_0000083 3300046542 Bacteria 83574
140 Ga0495656_0004103 3300046615 Bacteria 4962
141 Ga0495625_0000337 3300046660 Bacteria 71532
142 Ga0495625_0012981 3300046660 Bacteria 6721
143 Ga0495661_0033984 3300046665 Bacteria 3212
144 Ga0495670_0013272 3300046691 Bacteria 4052
145 Ga0495671_0003940 3300046692 Bacteria 9003
146 Ga0495649_0001856 3300046694 Bacteria 15480
147 Ga0495636_0003556 3300047318 Bacteria 6040
148 Ga0495687_020476 3300047443 Bacteria 3221
149 Ga0495687_020477 3300047443 Bacteria 3221
150 Ga0495684_0051210 3300047471 Bacteria 3152
151 Ga0495626_0001196 3300048091 Bacteria 21538
152 Ga0496110_0170639 3300048913 Bacteria 1974
153 Ga0496114_0004013 3300048917 Bacteria 11374
154 Ga0496116_0000661 3300048919 Bacteria 44909
155 Ga0496116_0023049 3300048919 Bacteria 4646
156 Ga0496117_0023160 3300048920 Bacteria 4959
157 Ga0496118_0021313 3300048921 Bacteria 5709
158 Ga0496118_0022188 3300048921 Bacteria 5561
159 Ga0496119_0012894 3300048922 Bacteria 6733
160 Ga0496120_0003516 3300048923 Bacteria 14198
161 Ga0496121_0000165 3300048924 Bacteria 145052
162 Ga0496121_0010069 3300048924 Bacteria 10730
163 Ga0496121_0012566 3300048924 Bacteria 9210
164 Ga0496121_0030833 3300048924 Bacteria 4916
165 Ga0496122_0000408 3300048925 Bacteria 91323
166 Ga0496122_0002323 3300048925 Bacteria 27448
167 Ga0496122_0073864 3300048925 Bacteria 2415
168 Ga0496123_0000188 3300048926 Bacteria 125135
169 Ga0496123_0010511 3300048926 Bacteria 8164
170 Ga0496124_0010449 3300048927 Bacteria 9396
171 Ga0496124_0032654 3300048927 Bacteria 4592
172 Ga0496125_0000121 3300048928 Bacteria 174971
173 Ga0496125_0000939 3300048928 Bacteria 45810
174 Ga0496125_0015215 3300048928 Bacteria 7450
175 Ga0496125_0028457 3300048928 Bacteria 5047
176 Ga0496125_0029924 3300048928 Bacteria 4882
177 Ga0496126_0079794 3300048929 Bacteria 2897
178 Ga0501034_0000447 3300049571 Bacteria 68166
179 Ga0501041_0026723 3300049577 Bacteria 3474
180 Ga0501042_0190737 3300049578 Bacteria 1478
181 Ga0501043_0003259 3300049579 Bacteria 13379
182 Ga0501046_0042087 3300049580 Bacteria 3642
183 Ga0501047_0001261 3300049581 Bacteria 25055
184 Ga0501074_0094159 3300049590 Bacteria 2145
185 Ga0501249_000099 3300049679 Bacteria 27431
186 Ga0501079_0149248 3300049741 Bacteria 1822
187 Ga0501081_0235758 3300049743 Bacteria 1333
188 Ga0501035_0002321 3300049822 Bacteria 18753
189 Ga0501035_0135977 3300049822 Bacteria 2140
190 Ga0501044_0068893 3300049823 Bacteria 3603
191 Ga0501045_0008154 3300049824 Bacteria 7297
192 nmdc:mga0k408_5063_c1 3300050493 Bacteria 6982
193 nmdc:mga09592_1310_c1 3300050508 Bacteria 19982
194 nmdc:mga0qj67_196171_c1 3300050509 Bacteria 1641
195 Ga0500562_003901 3300053108 Bacteria 3760
196 Ga0501084_0255441 3300054114 Bacteria 1479
197 Ga0501084_0308981 3300054114 Bacteria 1335
198 Ga0501082_0001444 3300060353 Bacteria 20878
199 Ga0501082_0074691 3300060353 Bacteria 2920
200 2886849119 2886848708 Bacteria 5632523
201 2513952461 2513237150 Bacteria 6553639
202 2538425579 2537561728 Bacteria 5149301
203 2599904317 2599185292 Bacteria 6290804
204 2644029192 2643221603 Bacteria 6147767
205 2644063171 2643221609 Bacteria 6756331
206 2671585960 2671180115 Bacteria 5353919
207 2739246295 2738543012 Bacteria 7115078
208 2739791879 2739367756 Bacteria 4553612
209 2816475541 2816332133 Bacteria 7249298
210 2831865098 2831864461 Bacteria 6502356
211 2834643549 2834641062 Bacteria 5559922
212 2855734116 2855730933 Bacteria 7047938
213 2855769706 2855767633 Bacteria 7049357
214 2857546129 2857542790 Bacteria 5326616
215 2858954262 2858950400 Bacteria 6783797
216 2871285982 2871282230 Bacteria 4917173
217 2881414045 2881412998 Bacteria 6492157
218 2884816094 2884811622 Bacteria 5552861
219 2884839427 2884836552 Bacteria 5219991
220 2884856763 2884852848 Bacteria 5221161
221 2896158109 2896154374 Bacteria 5221518
222 2941484211
223 2990712896 2990710928 Bacteria 5002431
224 8003405287 8003400568 Bacteria 5535898
225 8055227189 8055225921 Bacteria 3341787
226 JGI24751J29686_10011110
227 JGI25162J39368_1005544
228 JGI25151J46595_10000857
229 JGI25151J46595_10028050
230 rootL2_10001457
231 Ga0055526_1002634
232 Ga0055524_1000310
233 Ga0055524_1021610
234 Ga0055534_1000457
235 Ga0055531_10004193
236 Ga0055531_10016562
237 Ga0065165_1000170
238 Ga0065165_1000562
239 Ga0070683_100054414
240 Ga0070670_100006334
241 Ga0070677_10007596
242 Ga0070682_100072227
243 Ga0070675_100125412
244 Ga0070709_10006691
245 Ga0070713_100001594
246 Ga0070711_100004649
247 Ga0070681_10052839
248 Ga0068853_100001980
249 Ga0068855_100028595
250 Ga0068855_100164846
251 Ga0068857_100167077
252 Ga0068856_100012510
253 Ga0081455_10004576
254 Ga0081540_1021507
255 Ga0075364_10002831
256 Ga0075364_10019655
257 Ga0075364_10033727
258 Ga0075366_10015095
259 Ga0075366_10027013
260 Ga0075366_10062288
261 Ga0075370_10044928
262 Ga0075429_100004508
263 Ga0099823_1000176
264 Ga0079104_1000150
265 Ga0099826_10000021
266 Ga0105251_10022704
267 Ga0105240_10000250
268 Ga0105237_10092195
269 Ga0105238_10041948
270 Ga0157319_1000003
271 Ga0213872_10002251
272 Ga0207427_100551
273 Ga0209437_100272
274 Ga0209673_1020859
275 Ga0209130_1001008
276 Ga0209675_1000557
277 Ga0209675_1001151
278 Ga0209676_1003002
279 Ga0209025_1000003
280 Ga0209025_1000371
281 Ga0209025_1000447
282 Ga0209564_1000003
283 Ga0209050_1002848
284 Ga0209050_1008757
285 Ga0209256_1000150
286 Ga0209256_1000326
287 Ga0209256_1000344
288 Ga0209051_1000386
289 Ga0209051_1007084
290 Ga0209051_1013659
291 Ga0209257_1000318
292 Ga0209257_1000399
293 Ga0209257_1017235
294 Ga0207682_10005514
295 Ga0207707_10046024
296 Ga0207695_10000615
297 Ga0207671_10019633
298 Ga0207663_10008063
299 Ga0207657_10017121
300 Ga0207681_10120675
301 Ga0207694_10020719
302 Ga0207700_10034939
303 Ga0207664_10212585
304 Ga0207691_10044304
305 Ga0207667_10095916
306 Ga0207639_10009334
307 Ga0207702_10027490
308 Ga0207702_10075161
309 Ga0207674_10046805
310 Ga0207698_10001442
311 Ga0209281_1000050
312 Ga0209389_1022566
313 Ga0209282_1000019
314 Ga0209974_10005937
315 Ga0307517_10144767
316 Ga0307515_10005239
317 Ga0307515_10006245
318 Ga0307515_10006818
319 Ga0307515_10134723
320 Ga0265327_10002563
321 Ga0307513_10040435
322 Ga0307509_10012267
323 Ga0307408_100049863
324 Ga0307508_10000278
325 Ga0307514_10001051
326 Ga0307514_10003111
327 Ga0307514_10043042
328 Ga0307412_10000106
329 Ga0373933_0027255
330 Ga0373947_0007972
331 Ga0373937_0052715
332 Ga0373925_0036845
333 Ga0395899_0000598
334 Ga0395899_0013949
335 Ga0395899_0030628
336 Ga0395900_0165968
337 Ga0395898_0221299
338 Ga0395905_0000174
339 Ga0395905_0009460
340 Ga0395905_0009894
341 Ga0436361_0453075
342 Ga0451849_0487363
343 Ga0451853_0541487
344 Ga0450911_001085
345 Ga0439459_0000524
346 Ga0466969_0013333
347 Ga0466965_0009210
348 Ga0466966_0004556
349 Ga0453684_0120529
350 Ga0495596_0000064
351 Ga0495583_0001067
352 Ga0495583_0005837
353 Ga0495610_0000545
354 Ga0495616_0000974
355 Ga0495616_0001545
356 Ga0495620_0050249
357 Ga0495632_0033371
358 Ga0495637_0009838
359 Ga0495643_0000259
360 Ga0495663_0005745
361 Ga0495654_0005131
362 Ga0495609_0000244
363 Ga0495621_0001901
364 Ga0495597_0000083
365 Ga0495656_0004103
366 Ga0495625_0000337
367 Ga0495625_0012981
368 Ga0495661_0033984
369 Ga0495670_0013272
370 Ga0495671_0003940
371 Ga0495649_0001856
372 Ga0495636_0003556
373 Ga0495687_020476
374 Ga0495687_020477
375 Ga0495684_0051210
376 Ga0495626_0001196
377 Ga0496110_0170639
378 Ga0496114_0004013
379 Ga0496116_0000661
380 Ga0496116_0023049
381 Ga0496117_0023160
382 Ga0496118_0021313
383 Ga0496118_0022188
384 Ga0496119_0012894
385 Ga0496120_0003516
386 Ga0496121_0000165
387 Ga0496121_0010069
388 Ga0496121_0012566
389 Ga0496121_0030833
390 Ga0496122_0000408
391 Ga0496122_0002323
392 Ga0496122_0073864
393 Ga0496123_0000188
394 Ga0496123_0010511
395 Ga0496124_0010449
396 Ga0496124_0032654
397 Ga0496125_0000121
398 Ga0496125_0000939
399 Ga0496125_0015215
400 Ga0496125_0028457
401 Ga0496125_0029924
402 Ga0496126_0079794
403 Ga0501034_0000447
404 Ga0501041_0026723
405 Ga0501042_0190737
406 Ga0501043_0003259
407 Ga0501046_0042087
408 Ga0501047_0001261
409 Ga0501074_0094159
410 Ga0501249_000099
411 Ga0501079_0149248
412 Ga0501081_0235758
413 Ga0501035_0002321
414 Ga0501035_0135977
415 Ga0501044_0068893
416 Ga0501045_0008154
417 nmdc:mga0k408_5063_c1
418 nmdc:mga09592_1310_c1
419 nmdc:mga0qj67_196171_c1
420 Ga0500562_003901
421 Ga0501084_0255441
422 Ga0501084_0308981
423 Ga0501082_0001444
424 Ga0501082_0074691
425 2886849119
426 2513952461
427 2538425579
428 2599904317
429 2644029192
430 2644063171
431 2671585960
432 2739246295
433 2739791879
434 2816475541
435 2831865098
436 2834643549
437 2855734116
438 2855769706
439 2857546129
440 2858954262
441 2871285982
442 2881414045
443 2884816094
444 2884839427
445 2884856763
446 2896158109
447 2941484211
448 2990712896
449 8003405287
450 8055227189

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00330

Aconitase

Aconitase family (aconitate hydratase)

43

496

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kp2-assembly1.cif.gz_B-2 crystal structure of homoaconitase large subunit from methanococcus jannaschii (mj1003) 0.9292 4 458
4kp2-assembly1.cif.gz_B-2 crystal structure of homoaconitase large subunit from methanococcus jannaschii (mj1003) 0.9206 4 458
4kp1-assembly1.cif.gz_A crystal structure of ipm isomerase large subunit from methanococcus jannaschii (mj0499) 0.8833 4 463
4kp1-assembly1.cif.gz_A crystal structure of ipm isomerase large subunit from methanococcus jannaschii (mj0499) 0.8772 4 463
4nqy-assembly1.cif.gz_A the reduced form of mj0499 0.8664 4 462
ID Description Score Start End Superfamily
af_O14289_10_298_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9867 4 284 3.30.499.10
af_P07264_338_508_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9784 323 458 3.30.499.10
af_P0A6A6_327_466_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9776 326 462 3.30.499.10
af_O14289_312_505_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9758 299 462 3.30.499.10
4kp2B02 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9701 332 458 3.30.499.10
ID Description Score Start End GO Terms
AF-A0A6A8MP59-F1-model_v4 deleted 0.9968 1 393
AF-A0A355QJY8-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9966 37 354 GO:0003861
GO:0009098
GO:0046872
GO:0047456
GO:0051539
AF-A0A2U1EQJ0-F1-model_v4 deleted 0.9944 1 463
AF-A0A2D9H0R4-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9944 1 238 GO:0003861
GO:0009098
GO:0016853
GO:0046872
GO:0051539
AF-A0A349LP43-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9944 23 237 GO:0003861
GO:0009098
GO:0046872
GO:0051539

Map