F338642

General Info

Members Datasets Scaffolds Average Seq Length
226 133 224 1096

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100000261|Ga0070698_10000026122
Length 1139
Sequence MKSATLRQASRSHRDDANCSRLKRTLNGASQHKLNSSTKAWYIIITITILLPLSFFSCNEKENDGPSLFEALDSKTTGIDFVNKLTPTAQFNMFNYMDFNNDGLVDIFFSSNQGENKLYLNAGGMKFKDVTVETRIPQDGGWSTGVSVVDINNDGLLDIYVCRVGNYEVLKSHNQFLICKGKDANGVPYYEDEAAKMGLDFSGFSTQAAFFDYDLDGDLDFFLMNHSLRFNGTFNERSSYINTYDTLAADYLFRNESSSRGGKGEVKFVDVSANSGINRSIIGYGLGLSIADINLDGYPDVYIGNDFHENDYLYINQKNGTFKDELGTSMMHTSHFSMGTDVADITNDGFPEVISMDMMPEDPYILKRSLGEDEYNIFHFKIRNGYYPQFARNVLQLNRRNGLFSDIGFYSNVFATDWSWAALWTDFDNDGWKDLFISNGIPKRLNDMDYINYVSNDELREKIRTNHVEESDIALLEKFPQIKLANKFYLNKGKAKFEDIGFNIKNNPKTYSNGAAYADFDNDGDMDIVVNNIDEPALIFKNLSNDSTIKKSFLELKLQGSSTNLNALGAKAIVFAKNAQGTLFGEIRTYEKFPVRGFQGSMEVPMHIGLDKTNVDSVLLIWPDNSYEKLPPVKDSIINIAYKQGLPQFNYKSITERVTNTSKKAEDITNESGLLLLHEENPFNEFDREPLIPFMTSREGPALAVGDINGDKMEDVFVGSSKFKKSSLFIQQSNGKFIRSNQKAIDADSTYEEVDAVIVDLNNDSFNDLVIASGGNEYYGSSEYLLPRVYINDGKGNLSTLNDAFDKSILLTASCVVPYDFSGDGEVDLFIGGRAVPNEYGTIPQSYLLKNDGKGKFTDVTDQYSKDLSKVGFVKHSVWSDLDKDGDNDLVISLEWDGIVAFINEKGKFEKKYLTDKKGWWNFTLPVAGNLGLNNRLKASEQYPVRLYYYDFDGNGKKEQILTYYLEKKEIPFATKDELVKQIPELKKKYLYAGDFAKASLSEIFGKSNLNKSDLLSANYFSNVILINNGNWNFTLKELPWEAQLAPYRDAAIIDANYDNRPDILLSGNFYHSSIQLGEYDADYGTLLINKGSGNFTCSSLNGLAIKGEVRHVRKISLADKEAFILARNNDSLKIISFH

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2738541278 Niastella sp. CF465 Isolate Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
67 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
68 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
104 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
105 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
106 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
107 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
112 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
113 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
114 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
115 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
116 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
117 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
118 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
119 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
120 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
121 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
122 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
123 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
125 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
126 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
129 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
130 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
131 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
132 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
133 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.12
Metatranscriptomes 0
Isolates 0.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.1
Nodule 0
Rhizoplane 0
Rhizosphere 90.71
Stem 0
Stem Tuber 0
Unclassified 6.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10005551 3300003320 Bacteria 22814
2 rootH2_10040150 3300003320 Bacteria 24669
3 rootL2_10235039 3300003322 Bacteria 4121
4 Ga0065712_10067935 3300005290 Bacteria 20313
5 Ga0070658_10008072 3300005327 Bacteria 8467
6 Ga0070690_100006171 3300005330 Bacteria 6792
7 Ga0070670_100007817 3300005331 Bacteria 9099
8 Ga0070670_100044863 3300005331 Unclassified 3800
9 Ga0068869_100002416 3300005334 Bacteria 11259
10 Ga0068869_100002529 3300005334 Bacteria 11035
11 Ga0070666_10014388 3300005335 Bacteria 5037
12 Ga0070680_100000446 3300005336 Bacteria 28154
13 Ga0070682_100001602 3300005337 Bacteria 12609
14 Ga0068868_100001484 3300005338 Bacteria 16188
15 Ga0068868_100004826 3300005338 Bacteria 9462
16 Ga0068868_100008977 3300005338 Bacteria 7174
17 Ga0070660_100037477 3300005339 Bacteria 3676
18 Ga0070691_10000840 3300005341 Bacteria 12385
19 Ga0070661_100003534 3300005344 Bacteria 10766
20 Ga0070674_100006107 3300005356 Bacteria 7002
21 Ga0070673_100001541 3300005364 Bacteria 13572
22 Ga0070673_100035299 3300005364 Unclassified 3790
23 Ga0070659_100007830 3300005366 Bacteria 7775
24 Ga0070659_100019503 3300005366 Bacteria 5140
25 Ga0070667_100015819 3300005367 Bacteria 6242
26 Ga0070678_100014773 3300005456 Bacteria 4938
27 Ga0070681_10001202 3300005458 Bacteria 22492
28 Ga0070685_10001135 3300005466 Bacteria 14232
29 Ga0070698_100000261 3300005471 Bacteria 53090
30 Ga0070679_100000138 3300005530 Bacteria 59330
31 Ga0070679_100001530 3300005530 Bacteria 20612
32 Ga0070679_100003631 3300005530 Bacteria 14106
33 Ga0070684_100008873 3300005535 Bacteria 7885
34 Ga0070684_100009916 3300005535 Bacteria 7528
35 Ga0068853_100001198 3300005539 Bacteria 18488
36 Ga0068853_100014921 3300005539 Bacteria 6382
37 Ga0070672_100011278 3300005543 Bacteria 6232
38 Ga0070665_100000001 3300005548 Bacteria 1083363
39 Ga0068855_100000469 3300005563 Bacteria 49537
40 Ga0068855_100001364 3300005563 Bacteria 30276
41 Ga0068855_100002288 3300005563 Bacteria 23656
42 Ga0068855_100055474 3300005563 Unclassified 4654
43 Ga0068855_100058688 3300005563 Bacteria 4505
44 Ga0068856_100006076 3300005614 Bacteria 11862
45 Ga0068852_100001096 3300005616 Bacteria 17867
46 Ga0068852_100015686 3300005616 Bacteria 5886
47 Ga0068859_100001923 3300005617 Bacteria 21185
48 Ga0068859_100011064 3300005617 Bacteria 9075
49 Ga0068864_100004587 3300005618 Bacteria 11333
50 Ga0068861_100000913 3300005719 Bacteria 17906
51 Ga0068860_100000137 3300005843 Bacteria 119626
52 Ga0068860_100004899 3300005843 Bacteria 13642
53 Ga0068860_100011313 3300005843 Bacteria 8794
54 Ga0081539_10002233 3300005985 Bacteria 28209
55 Ga0075366_10016584 3300006195 Bacteria 4237
56 Ga0097621_100001252 3300006237 Bacteria 17553
57 Ga0097621_100001279 3300006237 Bacteria 17302
58 Ga0097621_100019809 3300006237 Bacteria 5173
59 Ga0097621_100023232 3300006237 Bacteria 4823
60 Ga0097621_100042710 3300006237 Bacteria 3653
61 Ga0068871_100036306 3300006358 Bacteria 3923
62 Ga0075430_100028179 3300006846 Bacteria 4771
63 Ga0075431_100003300 3300006847 Bacteria 15627
64 Ga0097620_100001923 3300006931 Bacteria 21185
65 Ga0097620_100011065 3300006931 Bacteria 9075
66 Ga0105240_10000205 3300009093 Bacteria 120767
67 Ga0105240_10000208 3300009093 Bacteria 118950
68 Ga0105240_10000225 3300009093 Bacteria 112806
69 Ga0105240_10001189 3300009093 Bacteria 45474
70 Ga0105240_10001268 3300009093 Bacteria 43714
71 Ga0105240_10010939 3300009093 Bacteria 12711
72 Ga0105240_10030416 3300009093 Bacteria 7019
73 Ga0105240_10041495 3300009093 Bacteria 5872
74 Ga0114129_10012429 3300009147 Bacteria 12121
75 Ga0105241_10000291 3300009174 Bacteria 37396
76 Ga0105241_10001079 3300009174 Bacteria 20776
77 Ga0105242_10004417 3300009176 Bacteria 10932
78 Ga0105242_10013397 3300009176 Bacteria 6335
79 Ga0105237_10007072 3300009545 Bacteria 12340
80 Ga0105237_10007267 3300009545 Bacteria 12153
81 Ga0105237_10019185 3300009545 Bacteria 7065
82 Ga0105237_10020470 3300009545 Bacteria 6817
83 Ga0105238_10000960 3300009551 Bacteria 29505
84 Ga0105249_10001054 3300009553 Bacteria 24439
85 Ga0105249_10001163 3300009553 Bacteria 23270
86 Ga0105239_10000169 3300010375 Bacteria 93659
87 Ga0105239_10005508 3300010375 Bacteria 14831
88 Ga0105239_10006293 3300010375 Bacteria 13802
89 Ga0105239_10008677 3300010375 Bacteria 11512
90 Ga0105239_10014510 3300010375 Bacteria 8740
91 Ga0105239_10017844 3300010375 Bacteria 7849
92 Ga0105246_10003377 3300011119 Bacteria 9671
93 Ga0157373_10010171 3300013100 Bacteria 6931
94 Ga0157373_10021070 3300013100 Bacteria 4732
95 Ga0157371_10003615 3300013102 Bacteria 13920
96 Ga0157371_10007573 3300013102 Bacteria 8764
97 Ga0157370_10000419 3300013104 Bacteria 53608
98 Ga0157370_10014777 3300013104 Bacteria 7968
99 Ga0157370_10060690 3300013104 Bacteria 3589
100 Ga0157369_10003424 3300013105 Bacteria 18822
101 Ga0157369_10005750 3300013105 Bacteria 14414
102 Ga0157374_10001515 3300013296 Bacteria 19575
103 Ga0157374_10028034 3300013296 Bacteria 5086
104 Ga0163162_10000253 3300013306 Bacteria 48450
105 Ga0163162_10008944 3300013306 Bacteria 9736
106 Ga0157372_10001522 3300013307 Bacteria 25205
107 Ga0157372_10001915 3300013307 Bacteria 22582
108 Ga0157372_10003748 3300013307 Bacteria 16318
109 Ga0157372_10007273 3300013307 Bacteria 11790
110 Ga0157372_10020053 3300013307 Bacteria 7209
111 Ga0157372_10027816 3300013307 Bacteria 6163
112 Ga0157375_10014620 3300013308 Bacteria 7010
113 Ga0163163_10000385 3300014325 Bacteria 41966
114 Ga0163163_10002060 3300014325 Bacteria 16981
115 Ga0157380_10003322 3300014326 Bacteria 11036
116 Ga0157379_10006188 3300014968 Bacteria 10309
117 Ga0157379_10050966 3300014968 Bacteria 3696
118 Ga0157376_10004412 3300014969 Bacteria 9796
119 Ga0157376_10024987 3300014969 Bacteria 4699
120 Ga0163161_10001294 3300017792 Bacteria 18667
121 Ga0213876_10003052 3300021384 Bacteria 9686
122 Ga0213876_10003892 3300021384 Bacteria 8438
123 Ga0209646_1000861 3300025246 Bacteria 10136
124 Ga0207426_1000211 3300025302 Bacteria 137322
125 Ga0207656_10004759 3300025321 Unclassified 4762
126 Ga0207647_10000321 3300025904 Bacteria 39699
127 Ga0207647_10009133 3300025904 Bacteria 7054
128 Ga0207645_10002941 3300025907 Bacteria 13168
129 Ga0207645_10005084 3300025907 Bacteria 9629
130 Ga0207705_10005644 3300025909 Bacteria 9343
131 Ga0207654_10002410 3300025911 Bacteria 9552
132 Ga0207707_10000620 3300025912 Bacteria 35314
133 Ga0207695_10000232 3300025913 Bacteria 147559
134 Ga0207695_10000257 3300025913 Bacteria 134853
135 Ga0207695_10001231 3300025913 Bacteria 43824
136 Ga0207695_10001367 3300025913 Bacteria 41365
137 Ga0207695_10005129 3300025913 Bacteria 17540
138 Ga0207671_10003254 3300025914 Bacteria 16338
139 Ga0207660_10008234 3300025917 Bacteria 6747
140 Ga0207657_10006814 3300025919 Bacteria 11793
141 Ga0207652_10000112 3300025921 Bacteria 88360
142 Ga0207652_10000115 3300025921 Bacteria 87927
143 Ga0207652_10000903 3300025921 Bacteria 28045
144 Ga0207652_10004317 3300025921 Bacteria 11590
145 Ga0207650_10039736 3300025925 Bacteria 3439
146 Ga0207706_10001941 3300025933 Bacteria 20308
147 Ga0207706_10003905 3300025933 Bacteria 14146
148 Ga0207706_10014940 3300025933 Bacteria 7031
149 Ga0207686_10004371 3300025934 Bacteria 7575
150 Ga0207686_10006017 3300025934 Bacteria 6513
151 Ga0207670_10002779 3300025936 Bacteria 9217
152 Ga0207670_10005024 3300025936 Bacteria 7211
153 Ga0207669_10009920 3300025937 Bacteria 4561
154 Ga0207691_10002441 3300025940 Bacteria 18177
155 Ga0207689_10001929 3300025942 Bacteria 19626
156 Ga0207689_10007585 3300025942 Bacteria 9504
157 Ga0207689_10028884 3300025942 Bacteria 4637
158 Ga0207689_10033268 3300025942 Unclassified 4284
159 Ga0207661_10008164 3300025944 Bacteria 7472
160 Ga0207679_10002551 3300025945 Bacteria 11231
161 Ga0207667_10000111 3300025949 Bacteria 131758
162 Ga0207667_10001142 3300025949 Bacteria 33351
163 Ga0207667_10005371 3300025949 Bacteria 15622
164 Ga0207667_10013677 3300025949 Bacteria 9276
165 Ga0207667_10017094 3300025949 Bacteria 8178
166 Ga0207667_10048144 3300025949 Unclassified 4509
167 Ga0207712_10000728 3300025961 Bacteria 25095
168 Ga0207668_10005042 3300025972 Bacteria 7772
169 Ga0207677_10024399 3300026023 Bacteria 3756
170 Ga0207639_10005935 3300026041 Bacteria 8283
171 Ga0207639_10009878 3300026041 Bacteria 6592
172 Ga0207641_10000191 3300026088 Bacteria 84147
173 Ga0207648_10000215 3300026089 Bacteria 62218
174 Ga0207648_10012745 3300026089 Bacteria 7856
175 Ga0207676_10016328 3300026095 Bacteria 5376
176 Ga0207676_10023572 3300026095 Bacteria 4543
177 Ga0207676_10039396 3300026095 Unclassified 3614
178 Ga0207674_10007199 3300026116 Bacteria 12984
179 Ga0207675_100000809 3300026118 Bacteria 31123
180 Ga0207675_100001899 3300026118 Bacteria 20842
181 Ga0207675_100024478 3300026118 Bacteria 5613
182 Ga0207683_10013008 3300026121 Bacteria 7104
183 Ga0207698_10001099 3300026142 Bacteria 15749
184 Ga0207698_10011965 3300026142 Bacteria 5654
185 Ga0268266_10000102 3300028379 Bacteria 179754
186 Ga0268264_10000189 3300028381 Bacteria 128203
187 Ga0268264_10003803 3300028381 Bacteria 12951
188 Ga0307515_10000001 3300028794 Bacteria 4259510
189 Ga0307515_10000107 3300028794 Bacteria 197046
190 Ga0307511_10000476 3300030521 Bacteria 43435
191 Ga0265327_10000316 3300031251 Bacteria 92271
192 Ga0307508_10000485 3300031616 Bacteria 47975
193 Ga0395899_0023445 3300037312 Bacteria 4673
194 Ga0395898_0003574 3300037466 Bacteria 17330
195 Ga0395901_0002326 3300038443 Bacteria 19369
196 Ga0395901_0017155 3300038443 Bacteria 7385
197 Ga0436365_0269270 3300039437 Bacteria 47222
198 Ga0436365_1157296 3300039437 Bacteria 13413
199 Ga0436365_1443559 3300039437 Bacteria 3482
200 Ga0439449_0003609 3300042007 Bacteria 6007
201 Ga0439449_0013696 3300042007 Bacteria 3052
202 Ga0439457_000529 3300042014 Bacteria 11089
203 Ga0466969_0000190 3300044656 Bacteria 33133
204 Ga0466972_0000337 3300044658 Bacteria 25976
205 Ga0453684_0049257 3300044712 Bacteria 5559
206 Ga0466957_0001583 3300044842 Bacteria 11952
207 Ga0466959_0000003 3300045049 Bacteria 285164
208 Ga0495630_0018022 3300046517 Bacteria 5181
209 Ga0495630_0040740 3300046517 Bacteria 3471
210 Ga0495648_0011387 3300046524 Bacteria 6703
211 Ga0495611_0000544 3300046648 Bacteria 22113
212 Ga0495658_0007193 3300046683 Bacteria 5498
213 Ga0495687_000001 3300047443 Bacteria 1215582
214 Ga0501038_0009302 3300049574 Bacteria 9014
215 Ga0501067_0009090 3300049583 Bacteria 5503
216 Ga0501225_0003781 3300049705 Bacteria 4548
217 Ga0501044_0035454 3300049823 Bacteria 5225
218 nmdc:mga05p37_482_c1 3300050507 Bacteria 43621
219 nmdc:mga06r32_10660_c1 3300050510 Bacteria 8290
220 Ga0500578_0001290 3300053086 Bacteria 25877
221 Ga0500583_0000019 3300053092 Bacteria 130534
222 Ga0500568_0013487 3300053139 Unclassified 3724
223 Ga0500622_0006043 3300053156 Bacteria 7113
224 Ga0500611_000001 3300053727 Bacteria 385744

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025925 Ga0207650_10039736 Ga0207650_100397362 942
2 3300042007 Ga0439449_0013696 Ga0439449_0013696_80_3034 943
3 3300025942 Ga0207689_10028884 Ga0207689_100288841 977
4 3300046517 Ga0495630_0040740 Ga0495630_0040740_402_3422 978
5 3300047443 Ga0495687_000001 Ga0495687_000001_820842_823880 988
6 3300013104 Ga0157370_10060690 Ga0157370_100606901 991
7 3300013104 Ga0157370_10014777 Ga0157370_100147773 992
8 3300014969 Ga0157376_10004412 Ga0157376_100044125 1009
9 3300039437 Ga0436365_1443559 Ga0436365_1443559_179_3337 1023
10 3300053092 Ga0500583_0000019 Ga0500583_0000019_51136_54312 1027
11 3300044712 Ga0453684_0049257 Ga0453684_0049257_1433_4615 1032
12 3300053139 Ga0500568_0013487 Ga0500568_0013487_45_3203 1037
13 3300042007 Ga0439449_0003609 Ga0439449_0003609_661_3945 1044
14 3300042014 Ga0439457_000529 Ga0439457_000529_998_4282 1044
15 3300013100 Ga0157373_10021070 Ga0157373_100210703 1055
16 3300014968 Ga0157379_10050966 Ga0157379_100509662 1058
17 3300021384 Ga0213876_10003052 Ga0213876_100030522 1060
18 3300046524 Ga0495648_0011387 Ga0495648_0011387_3418_6651 1061
19 3300005617 Ga0068859_100011064 Ga0068859_1000110643 1064
20 3300005719 Ga0068861_100000913 Ga0068861_1000009135 1064
21 3300006237 Ga0097621_100019809 Ga0097621_1000198092 1064
22 3300006931 Ga0097620_100011065 Ga0097620_1000110653 1064
23 3300013306 Ga0163162_10008944 Ga0163162_100089442 1064
24 3300026118 Ga0207675_100001899 Ga0207675_1000018997 1064
25 3300028794 Ga0307515_10000107 Ga0307515_1000010782 1064
26 3300013296 Ga0157374_10001515 Ga0157374_100015151 1066
27 3300026095 Ga0207676_10016328 Ga0207676_100163283 1066
28 3300049574 Ga0501038_0009302 Ga0501038_0009302_3548_6892 1066
29 3300005339 Ga0070660_100037477 Ga0070660_1000374772 1068
30 3300005366 Ga0070659_100007830 Ga0070659_1000078302 1068
31 3300005617 Ga0068859_100001923 Ga0068859_1000019238 1068
32 3300006931 Ga0097620_100001923 Ga0097620_1000019238 1068
33 3300025904 Ga0207647_10000321 Ga0207647_100003212 1068
34 3300025949 Ga0207667_10013677 Ga0207667_100136774 1068
35 3300006237 Ga0097621_100001252 Ga0097621_1000012527 1069
36 3300013306 Ga0163162_10000253 Ga0163162_1000025319 1070
37 3300005290 Ga0065712_10067935 Ga0065712_100679353 1071
38 3300005466 Ga0070685_10001135 Ga0070685_100011352 1071
39 3300009553 Ga0105249_10001163 Ga0105249_100011634 1071
40 3300013308 Ga0157375_10014620 Ga0157375_100146202 1071
41 3300014326 Ga0157380_10003322 Ga0157380_100033224 1071
42 3300017792 Ga0163161_10001294 Ga0163161_100012946 1071
43 3300025936 Ga0207670_10002779 Ga0207670_100027794 1071
44 3300025961 Ga0207712_10000728 Ga0207712_1000072811 1071
45 3300014968 Ga0157379_10006188 Ga0157379_100061883 1073
46 3300005327 Ga0070658_10008072 Ga0070658_100080728 1074
47 3300005458 Ga0070681_10001202 Ga0070681_1000120215 1074
48 3300005563 Ga0068855_100002288 Ga0068855_1000022885 1074
49 3300013102 Ga0157371_10007573 Ga0157371_100075736 1074
50 3300013105 Ga0157369_10003424 Ga0157369_1000342412 1074
51 3300025909 Ga0207705_10005644 Ga0207705_100056441 1074
52 3300025917 Ga0207660_10008234 Ga0207660_100082341 1074
53 3300025921 Ga0207652_10000115 Ga0207652_1000011514 1074
54 3300025949 Ga0207667_10001142 Ga0207667_1000114215 1074
55 3300026088 Ga0207641_10000191 Ga0207641_100001919 1074
56 3300037312 Ga0395899_0023445 Ga0395899_0023445_1041_4400 1074
57 3300038443 Ga0395901_0017155 Ga0395901_0017155_2011_5370 1074
58 3300006237 Ga0097621_100001279 Ga0097621_1000012793 1076
59 3300009093 Ga0105240_10010939 Ga0105240_100109393 1076
60 3300025913 Ga0207695_10005129 Ga0207695_100051296 1076
61 3300025934 Ga0207686_10006017 Ga0207686_100060172 1076
62 3300026095 Ga0207676_10023572 Ga0207676_100235722 1076
63 3300031251 Ga0265327_10000316 Ga0265327_1000031658 1076
64 3300049583 Ga0501067_0009090 Ga0501067_0009090_1815_5120 1076
65 3300049823 Ga0501044_0035454 Ga0501044_0035454_1207_4512 1076
66 3300005335 Ga0070666_10014388 Ga0070666_100143882 1077
67 3300005471 Ga0070698_100000261 Ga0070698_10000026122 1077
68 3300009093 Ga0105240_10000225 Ga0105240_1000022575 1077
69 3300009176 Ga0105242_10004417 Ga0105242_100044173 1077
70 3300021384 Ga0213876_10003892 Ga0213876_100038922 1077
71 3300025919 Ga0207657_10006814 Ga0207657_100068143 1077
72 3300025933 Ga0207706_10003905 Ga0207706_100039054 1077
73 3300025934 Ga0207686_10004371 Ga0207686_100043712 1077
74 3300039437 Ga0436365_0269270 Ga0436365_0269270_41965_45306 1077
75 3300005563 Ga0068855_100001364 Ga0068855_10000136424 1078
76 3300005356 Ga0070674_100006107 Ga0070674_1000061073 1079
77 3300010375 Ga0105239_10006293 Ga0105239_100062935 1079
78 3300025937 Ga0207669_10009920 Ga0207669_100099203 1079
79 3300026089 Ga0207648_10012745 Ga0207648_100127453 1080
80 3300005338 Ga0068868_100001484 Ga0068868_1000014848 1081
81 3300005364 Ga0070673_100001541 Ga0070673_1000015416 1081
82 3300005843 Ga0068860_100004899 Ga0068860_1000048992 1081
83 3300009093 Ga0105240_10000205 Ga0105240_1000020548 1081
84 3300009093 Ga0105240_10041495 Ga0105240_100414952 1081
85 3300009174 Ga0105241_10000291 Ga0105241_100002916 1081
86 3300009545 Ga0105237_10007072 Ga0105237_100070724 1081
87 3300009551 Ga0105238_10000960 Ga0105238_1000096014 1081
88 3300010375 Ga0105239_10014510 Ga0105239_100145104 1081
89 3300014325 Ga0163163_10002060 Ga0163163_100020607 1081
90 3300025321 Ga0207656_10004759 Ga0207656_100047592 1081
91 3300025907 Ga0207645_10002941 Ga0207645_100029412 1081
92 3300025911 Ga0207654_10002410 Ga0207654_100024103 1081
93 3300025913 Ga0207695_10001367 Ga0207695_1000136722 1081
94 3300025914 Ga0207671_10003254 Ga0207671_100032548 1081
95 3300025972 Ga0207668_10005042 Ga0207668_100050421 1081
96 3300026023 Ga0207677_10024399 Ga0207677_100243992 1081
97 3300026095 Ga0207676_10039396 Ga0207676_100393962 1081
98 3300026118 Ga0207675_100024478 Ga0207675_1000244782 1081
99 3300028381 Ga0268264_10003803 Ga0268264_100038035 1081
100 3300005530 Ga0070679_100001530 Ga0070679_10000153010 1083
101 3300005616 Ga0068852_100015686 Ga0068852_1000156861 1083
102 3300011119 Ga0105246_10003377 Ga0105246_100033772 1083
103 3300025921 Ga0207652_10004317 Ga0207652_100043173 1083
104 3300026142 Ga0207698_10001099 Ga0207698_100010992 1083
105 3300039437 Ga0436365_1157296 Ga0436365_1157296_2541_5864 1083
106 3300044842 Ga0466957_0001583 Ga0466957_0001583_5834_9160 1083
107 3300046648 Ga0495611_0000544 Ga0495611_0000544_8532_11945 1083
108 3300006846 Ga0075430_100028179 Ga0075430_1000281793 1084
109 3300006847 Ga0075431_100003300 Ga0075431_1000033002 1084
110 3300009545 Ga0105237_10007267 Ga0105237_100072674 1084
111 3300010375 Ga0105239_10008677 Ga0105239_100086774 1084
112 3300050510 nmdc:mga06r32_10660_c1 nmdc:mga06r32_10660_c1_3518_6844 1084
113 3300009147 Ga0114129_10012429 Ga0114129_100124293 1086
114 3300013105 Ga0157369_10005750 Ga0157369_100057504 1086
115 3300013307 Ga0157372_10027816 Ga0157372_100278162 1086
116 3300050507 nmdc:mga05p37_482_c1 nmdc:mga05p37_482_c1_4741_8118 1086
117 3300005330 Ga0070690_100006171 Ga0070690_1000061712 1087
118 3300005338 Ga0068868_100004826 Ga0068868_1000048262 1087
119 3300005338 Ga0068868_100008977 Ga0068868_1000089772 1087
120 3300005456 Ga0070678_100014773 Ga0070678_1000147732 1087
121 3300005616 Ga0068852_100001096 Ga0068852_10000109610 1087
122 3300009093 Ga0105240_10030416 Ga0105240_100304162 1087
123 3300013296 Ga0157374_10028034 Ga0157374_100280343 1087
124 3300013307 Ga0157372_10001915 Ga0157372_1000191511 1087
125 3300013307 Ga0157372_10007273 Ga0157372_100072734 1087
126 3300025302 Ga0207426_1000211 Ga0207426_100021186 1087
127 3300025933 Ga0207706_10001941 Ga0207706_100019416 1087
128 3300025942 Ga0207689_10007585 Ga0207689_100075855 1087
129 3300025949 Ga0207667_10005371 Ga0207667_100053712 1087
130 3300026116 Ga0207674_10007199 Ga0207674_100071992 1087
131 3300026121 Ga0207683_10013008 Ga0207683_100130082 1087
132 3300026142 Ga0207698_10011965 Ga0207698_100119652 1087
133 3300005331 Ga0070670_100007817 Ga0070670_1000078172 1088
134 3300005334 Ga0068869_100002416 Ga0068869_1000024163 1088
135 3300005367 Ga0070667_100015819 Ga0070667_1000158192 1088
136 3300005535 Ga0070684_100009916 Ga0070684_1000099164 1088
137 3300005563 Ga0068855_100000469 Ga0068855_10000046917 1088
138 3300006237 Ga0097621_100023232 Ga0097621_1000232322 1088
139 3300006358 Ga0068871_100036306 Ga0068871_1000363062 1088
140 3300009093 Ga0105240_10001268 Ga0105240_100012686 1088
141 3300009553 Ga0105249_10001054 Ga0105249_100010545 1088
142 3300010375 Ga0105239_10017844 Ga0105239_100178442 1088
143 3300025913 Ga0207695_10000232 Ga0207695_1000023270 1088
144 3300025933 Ga0207706_10014940 Ga0207706_100149402 1088
145 3300025949 Ga0207667_10000111 Ga0207667_1000011171 1088
146 3300049705 Ga0501225_0003781 Ga0501225_0003781_1122_4514 1088
147 3300013102 Ga0157371_10003615 Ga0157371_100036158 1089
148 3300013307 Ga0157372_10020053 Ga0157372_100200533 1089
149 3300025940 Ga0207691_10002441 Ga0207691_100024414 1089
150 3300046517 Ga0495630_0018022 Ga0495630_0018022_130_3474 1089
151 3300046683 Ga0495658_0007193 Ga0495658_0007193_1594_4938 1089
152 3300003322 rootL2_10235039 rootL2_102350391 1090
153 3300006195 Ga0075366_10016584 Ga0075366_100165841 1090
154 3300006237 Ga0097621_100042710 Ga0097621_1000427102 1090
155 3300025246 Ga0209646_1000861 Ga0209646_10008612 1090
156 3300026118 Ga0207675_100000809 Ga0207675_1000008091 1090
157 3300005331 Ga0070670_100044863 Ga0070670_1000448632 1091
158 3300005364 Ga0070673_100035299 Ga0070673_1000352992 1091
159 3300009093 Ga0105240_10000208 Ga0105240_100002083 1091
160 3300025913 Ga0207695_10000257 Ga0207695_1000025782 1091
161 3300005366 Ga0070659_100019503 Ga0070659_1000195033 1092
162 3300005530 Ga0070679_100000138 Ga0070679_10000013845 1092
163 3300005563 Ga0068855_100055474 Ga0068855_1000554742 1092
164 3300013100 Ga0157373_10010171 Ga0157373_100101715 1092
165 3300025913 Ga0207695_10001231 Ga0207695_1000123117 1092
166 3300025921 Ga0207652_10000112 Ga0207652_100001127 1092
167 3300025949 Ga0207667_10017094 Ga0207667_100170942 1092
168 3300037466 Ga0395898_0003574 Ga0395898_0003574_7220_10570 1092
169 3300038443 Ga0395901_0002326 Ga0395901_0002326_14550_17900 1092
170 3300003320 rootH2_10040150 rootH2_100401502 1093
171 3300005614 Ga0068856_100006076 Ga0068856_1000060762 1093
172 3300005843 Ga0068860_100000137 Ga0068860_10000013714 1093
173 3300028381 Ga0268264_10000189 Ga0268264_1000018975 1093
174 3300044658 Ga0466972_0000337 Ga0466972_0000337_11796_15143 1093
175 3300053086 Ga0500578_0001290 Ga0500578_0001290_12571_15918 1093
176 3300005334 Ga0068869_100002529 Ga0068869_1000025292 1095
177 3300005543 Ga0070672_100011278 Ga0070672_1000112782 1095
178 3300005548 Ga0070665_100000001 Ga0070665_100000001339 1095
179 3300005618 Ga0068864_100004587 Ga0068864_1000045872 1095
180 3300009176 Ga0105242_10013397 Ga0105242_100133973 1095
181 3300013307 Ga0157372_10003748 Ga0157372_100037482 1095
182 3300014325 Ga0163163_10000385 Ga0163163_1000038530 1095
183 3300025904 Ga0207647_10009133 Ga0207647_100091332 1095
184 3300025907 Ga0207645_10005084 Ga0207645_100050848 1095
185 3300025936 Ga0207670_10005024 Ga0207670_100050242 1095
186 3300025942 Ga0207689_10001929 Ga0207689_100019298 1095
187 3300025942 Ga0207689_10033268 Ga0207689_100332682 1095
188 3300025945 Ga0207679_10002551 Ga0207679_100025512 1095
189 3300026089 Ga0207648_10000215 Ga0207648_1000021532 1095
190 3300028379 Ga0268266_10000102 Ga0268266_1000010227 1095
191 3300014969 Ga0157376_10024987 Ga0157376_100249872 1096
192 3300053727 Ga0500611_000001 Ga0500611_000001_215868_219200 1096
193 3300030521 Ga0307511_10000476 Ga0307511_1000047610 1097
194 3300053156 Ga0500622_0006043 Ga0500622_0006043_1599_4946 1097
195 iso_pu_bacteria 2522125168 2522547858 1097
196 3300005344 Ga0070661_100003534 Ga0070661_1000035343 1098
197 3300005535 Ga0070684_100008873 Ga0070684_1000088732 1098
198 3300025944 Ga0207661_10008164 Ga0207661_100081644 1098
199 3300028794 Ga0307515_10000001 Ga0307515_100000011489 1098
200 3300009545 Ga0105237_10019185 Ga0105237_100191852 1099
201 3300010375 Ga0105239_10005508 Ga0105239_100055087 1099
202 3300044656 Ga0466969_0000190 Ga0466969_0000190_27697_31044 1099
203 3300045049 Ga0466959_0000003 Ga0466959_0000003_155565_158912 1099
204 iso_pu_bacteria 2738541278 2738725054 1099
205 3300005843 Ga0068860_100011313 Ga0068860_1000113132 1100
206 3300005985 Ga0081539_10002233 Ga0081539_100022339 1100
207 3300031616 Ga0307508_10000485 Ga0307508_1000048521 1100
208 3300005336 Ga0070680_100000446 Ga0070680_1000004469 1101
209 3300005337 Ga0070682_100001602 Ga0070682_1000016024 1101
210 3300005341 Ga0070691_10000840 Ga0070691_100008404 1101
211 3300005530 Ga0070679_100003631 Ga0070679_1000036312 1101
212 3300005539 Ga0068853_100001198 Ga0068853_1000011982 1101
213 3300005563 Ga0068855_100058688 Ga0068855_1000586882 1101
214 3300009093 Ga0105240_10001189 Ga0105240_1000118925 1101
215 3300009174 Ga0105241_10001079 Ga0105241_100010794 1101
216 3300013104 Ga0157370_10000419 Ga0157370_100004193 1101
217 3300025912 Ga0207707_10000620 Ga0207707_1000062024 1101
218 3300025921 Ga0207652_10000903 Ga0207652_1000090310 1101
219 3300025949 Ga0207667_10048144 Ga0207667_100481442 1101
220 3300026041 Ga0207639_10009878 Ga0207639_100098782 1101
221 3300005539 Ga0068853_100014921 Ga0068853_1000149212 1102
222 3300026041 Ga0207639_10005935 Ga0207639_100059354 1102
223 3300009545 Ga0105237_10020470 Ga0105237_100204702 1103
224 3300010375 Ga0105239_10000169 Ga0105239_100001695 1103
225 3300013307 Ga0157372_10001522 Ga0157372_1000152214 1103
226 3300003320 rootH2_10005551 rootH2_100055512 1106

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13517

FG-GAP_3

FG-GAP-like repeat

292

355

0.91

PF13517

FG-GAP_3

FG-GAP-like repeat

98

161

0.9

PF13517

FG-GAP_3

FG-GAP-like repeat

707

771

0.87

PF07593

UnbV_ASPIC

ASPIC and UnbV

567

636

0.86

PF13517

FG-GAP_3

FG-GAP-like repeat

820

892

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bzj-assembly1.cif.gz_F the structure of the copii coat assembled on membranes 0.7438 711 1101
5y31-assembly2.cif.gz_D crystal structure of human lgi1-adam22 complex 0.7276 631 1102
5y2z-assembly5.cif.gz_J crystal structure of human lgi1 eptp-adam22 complex 0.717 632 1102
8hq2-assembly2.cif.gz_E crystal structure of human adam22 in complex with human lgi1 mutant 0.7148 631 1102
5y2z-assembly5.cif.gz_J crystal structure of human lgi1 eptp-adam22 complex 0.7076 632 1102
ID Description Score Start End Superfamily
af_I1LFD7_6_84_3.50.70.10 Alpha Beta;3-Layer(bba) Sandwich;Chalcone isomerase; 0.7704 187 278 3.50.70.10
af_P42935_536_786_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7106 671 870 2.130.10.10
af_B6TSA2_226_370_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7096 766 895 2.130.10.10
af_A1XF92_202_447_2.130.10.130 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;Integrin alpha, N-terminal 0.7066 58 294 2.130.10.130
af_Q54J98_246_425_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7022 656 868 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A258LBS9-F1-model_v4 ASPIC/UnbV domain-containing protein 0.985 626 1105
AF-A0A832BN72-F1-model_v4 ASPIC/UnbV domain-containing protein 0.9771 39 1105
AF-A0A258LBS9-F1-model_v4 ASPIC/UnbV domain-containing protein 0.971 626 1105
AF-A0A832BN72-F1-model_v4 ASPIC/UnbV domain-containing protein 0.9699 39 1105
AF-A0A7J5WN81-F1-model_v4 Fg-gap repeat 0.9676 310 1105

Feature Viewer

pLDDT pTM Quality
86.77 0.86 High
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Predicted Structure (AlphaFold2)

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