F339012

General Info

Members Datasets Scaffolds Average Seq Length
226 184 452 507

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10004094|Ga0316576_100040946
Length 534
Sequence VSAGVNATVPGTDVASVPLPMRAENITKVFPGTTALEDVTFDVHPGKVNVLVGENGAGKSTLMKILAGVEQPTRGRVLMDGEPVQLPSVTAAAAHGVGIIFQELNLCPNLSVLDNLFLAQEIVRGGTIDRKAQRQRALELLDRLEQDIDPDEIVSNLRIGQQQIVEIAKALTRDVRVLIMDEPTSALSQTEVEGLFRIIDDLKARGVSIVYISHKLDELLQVGDHITVLRDGRVVAHAVATDVDVPWIIEQMVGRTPASLFTRSEHEQGEVLLRVEDVTLPRLGGGYLLDHVHLEVHAGEILGLYGLMGAGRTELMEVLAGVRPEASGKIWLDGKELGHSGVADRIDSGVVLVPEDRKTDGLVDALSVAHNMVLASLKRYLNRFYLSAARERSAVDQMISDLSVRVSDRAQPITSLSGGNQQKVVVAKGLLTEPRVLMLDEPTRGIDVGAKSEIFQIMSRLAGEGFGILFVSSELKEVLAMSDRILVLSKGAITAEYSRDEASEEKLVAASAVGHGPAATHHKETQAMTGGVQA

Samples

Sample ID Description Type Environment
1 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
27 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
66 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
67 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
68 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
90 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
94 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
95 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
96 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
97 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
98 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
99 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
100 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
101 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
102 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
103 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
104 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
105 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
106 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
107 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
108 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
109 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
110 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
111 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
112 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
113 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
116 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
117 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
118 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
119 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
120 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
124 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
125 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
126 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
127 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
128 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
136 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
137 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
145 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
149 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
152 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
153 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
154 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
155 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
156 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
157 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
158 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
159 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
160 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
161 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
162 2643221558 Rhizobium sp. Root149 Isolate Unclassified
163 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
164 2643221719 Rhizobium sp. Root274 Isolate Unclassified
165 2738541278 Niastella sp. CF465 Isolate Unclassified
166 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
167 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
168 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
169 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
170 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
171 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
172 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
173 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
174 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
175 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
176 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
177 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
178 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
179 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
180 2919679072 Pseudotabrizicola sp. 4114 Isolate Unclassified
181 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
182 3000405567 Rhodobacteraceae bacterium LNNU 3342 Isolate Rhizosphere
183 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
184 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.5
Metatranscriptomes 0
Isolates 11.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.96
Nodule 2.21
Rhizoplane 2.65
Rhizosphere 71.24
Stem 0
Stem Tuber 0
Unclassified 1.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316576_10004094 3300031727 Bacteria 8691
2 rootH1_10067642 3300003323 Bacteria 6630
3 Ga0065707_10002552 3300005295 Bacteria 7814
4 Ga0070658_10027027 3300005327 Bacteria 4607
5 Ga0070676_10032315 3300005328 Bacteria 2998
6 Ga0070683_100103507 3300005329 Unclassified 2683
7 Ga0070670_100106832 3300005331 Bacteria 2412
8 Ga0068869_100057442 3300005334 Bacteria 2841
9 Ga0070666_10009600 3300005335 Bacteria 6040
10 Ga0068868_100056196 3300005338 Bacteria 3107
11 Ga0070660_100010899 3300005339 Bacteria 6435
12 Ga0070660_100066361 3300005339 Bacteria 2809
13 Ga0070661_100027756 3300005344 Bacteria 4078
14 Ga0070669_100005941 3300005353 Bacteria 8808
15 Ga0070674_100014222 3300005356 Bacteria 4943
16 Ga0070688_100020124 3300005365 Bacteria 3875
17 Ga0070709_10068409 3300005434 Bacteria 2284
18 Ga0070714_100131057 3300005435 Bacteria 2241
19 Ga0070708_100132838 3300005445 Bacteria 2304
20 Ga0070663_100010683 3300005455 Bacteria 5729
21 Ga0070678_100010000 3300005456 Bacteria 5771
22 Ga0070678_100012445 3300005456 Bacteria 5290
23 Ga0070681_10089641 3300005458 Bacteria 3027
24 Ga0070665_100039808 3300005548 Bacteria 4725
25 Ga0070665_100060952 3300005548 Bacteria 3782
26 Ga0068855_100052844 3300005563 Bacteria 4782
27 Ga0068852_100016706 3300005616 Bacteria 5733
28 Ga0068859_100016675 3300005617 Bacteria 7376
29 Ga0068859_100048580 3300005617 Bacteria 4262
30 Ga0068851_10037413 3300005834 Bacteria 2433
31 Ga0068870_10024164 3300005840 Bacteria 3005
32 Ga0068860_100003144 3300005843 Bacteria 17057
33 Ga0068862_100005424 3300005844 Bacteria 10651
34 Ga0068862_100019521 3300005844 Bacteria 5659
35 Ga0081455_10038961 3300005937 Bacteria 4204
36 Ga0081540_1019376 3300005983 Bacteria 4138
37 Ga0070717_10000962 3300006028 Bacteria 19214
38 Ga0075364_10000076 3300006051 Bacteria 38765
39 Ga0075364_10011926 3300006051 Bacteria 5296
40 Ga0075367_10001979 3300006178 Bacteria 9118
41 Ga0075366_10002957 3300006195 Bacteria 8849
42 Ga0097621_100002026 3300006237 Bacteria 13858
43 Ga0097621_100179269 3300006237 Bacteria 1830
44 Ga0068871_100004891 3300006358 Bacteria 9357
45 Ga0068871_100019187 3300006358 Bacteria 5218
46 Ga0075428_100001093 3300006844 Bacteria 28859
47 Ga0075430_100005023 3300006846 Bacteria 11136
48 Ga0075430_100074980 3300006846 Bacteria 2837
49 Ga0075431_100003708 3300006847 Bacteria 14843
50 Ga0068865_100077678 3300006881 Bacteria 2373
51 Ga0068865_100194691 3300006881 Bacteria 1570
52 Ga0097620_100016675 3300006931 Bacteria 7376
53 Ga0097620_100048579 3300006931 Bacteria 4262
54 Ga0079104_1000123 3300006946 Bacteria 111052
55 Ga0105240_10061396 3300009093 Bacteria 4684
56 Ga0111539_10013557 3300009094 Bacteria 10190
57 Ga0111539_10023250 3300009094 Bacteria 7614
58 Ga0105247_10018707 3300009101 Bacteria 4158
59 Ga0114129_10001777 3300009147 Bacteria 29359
60 Ga0105243_10105271 3300009148 Bacteria 2350
61 Ga0105241_10008643 3300009174 Bacteria 7486
62 Ga0105242_10038163 3300009176 Bacteria 3862
63 Ga0105248_10019633 3300009177 Bacteria 7480
64 Ga0105248_10181666 3300009177 Bacteria 2370
65 Ga0105238_10026486 3300009551 Bacteria 5912
66 Ga0105033_100436 3300009986 Bacteria 3262
67 Ga0105239_10007813 3300010375 Bacteria 12234
68 Ga0105239_10198991 3300010375 Bacteria 2244
69 Ga0157370_10028638 3300013104 Bacteria 5477
70 Ga0157369_10019525 3300013105 Bacteria 7584
71 Ga0157369_10030340 3300013105 Bacteria 5963
72 Ga0157374_10005908 3300013296 Bacteria 10339
73 Ga0157374_10096624 3300013296 Bacteria 2825
74 Ga0157378_10000086 3300013297 Bacteria 86864
75 Ga0157378_10088301 3300013297 Bacteria 2813
76 Ga0163162_10010674 3300013306 Bacteria 8933
77 Ga0163162_10074731 3300013306 Bacteria 3448
78 Ga0157372_10170885 3300013307 Unclassified 2515
79 Ga0157375_10017390 3300013308 Bacteria 6487
80 Ga0157377_10002310 3300014745 Bacteria 8387
81 Ga0157379_10003094 3300014968 Bacteria 14072
82 Ga0157376_10002855 3300014969 Bacteria 11829
83 Ga0209130_1000880 3300025284 Bacteria 24560
84 Ga0209025_1000429 3300025294 Bacteria 83306
85 Ga0209758_1001704 3300025297 Bacteria 24679
86 Ga0207426_1000085 3300025302 Bacteria 293171
87 Ga0207680_10035083 3300025903 Bacteria 2876
88 Ga0207695_10047844 3300025913 Bacteria 4521
89 Ga0207693_10103397 3300025915 Bacteria 2234
90 Ga0207657_10012165 3300025919 Bacteria 8503
91 Ga0207681_10017834 3300025923 Bacteria 4463
92 Ga0207650_10142055 3300025925 Bacteria 1888
93 Ga0207664_10068109 3300025929 Bacteria 2858
94 Ga0207706_10029363 3300025933 Bacteria 4908
95 Ga0207709_10055381 3300025935 Bacteria 2449
96 Ga0207669_10014949 3300025937 Bacteria 3903
97 Ga0207711_10036545 3300025941 Bacteria 4168
98 Ga0207689_10043892 3300025942 Bacteria 3696
99 Ga0207667_10071989 3300025949 Bacteria 3593
100 Ga0207658_10023248 3300025986 Bacteria 4325
101 Ga0207639_10124676 3300026041 Bacteria 2122
102 Ga0207702_10048813 3300026078 Bacteria 3570
103 Ga0207702_10213636 3300026078 Unclassified 1794
104 Ga0207674_10000449 3300026116 Bacteria 53656
105 Ga0207674_10014932 3300026116 Bacteria 8558
106 Ga0207674_10024595 3300026116 Bacteria 6432
107 Ga0207675_100000139 3300026118 Bacteria 62161
108 Ga0207683_10010755 3300026121 Bacteria 7801
109 Ga0207683_10013940 3300026121 Bacteria 6854
110 Ga0207698_10031199 3300026142 Bacteria 3843
111 Ga0209281_1000251 3300027111 Bacteria 106988
112 Ga0207428_10009556 3300027907 Bacteria 8689
113 Ga0268266_10067078 3300028379 Bacteria 3105
114 Ga0268265_10007260 3300028380 Bacteria 7490
115 Ga0307517_10000005 3300028786 Bacteria 260207
116 Ga0316176_1139212 3300030732 Bacteria 7209
117 Ga0316181_1068791 3300030744 Bacteria 41630
118 Ga0265316_10006611 3300031344 Bacteria 11043
119 Ga0265316_10014791 3300031344 Bacteria 6850
120 Ga0307508_10000105 3300031616 Bacteria 99107
121 Ga0307508_10000575 3300031616 Bacteria 43685
122 Ga0307508_10093848 3300031616 Bacteria 2591
123 Ga0316575_10022984 3300031665 Bacteria 2408
124 Ga0316579_10000324 3300031691 Bacteria 14881
125 Ga0316576_10015368 3300031727 Bacteria 5136
126 Ga0316578_10008211 3300031728 Bacteria 5295
127 Ga0316577_10021405 3300031733 Bacteria 3587
128 Ga0316577_10026653 3300031733 Bacteria 3219
129 Ga0307415_100140568 3300032126 Bacteria 1843
130 Ga0307510_10114323 3300033180 Bacteria 2428
131 Ga0316574_0121008 3300035398 Bacteria 1681
132 Ga0316582_0010634 3300036647 Bacteria 5048
133 Ga0316582_0031266 3300036647 Bacteria 3252
134 Ga0316584_0002769 3300036712 Bacteria 11214
135 Ga0316584_0082978 3300036712 Bacteria 2400
136 Ga0316581_0000014 3300037588 Bacteria 16672
137 Ga0400483_083752 3300039062 Bacteria 12459
138 Ga0400483_206290 3300039062 Bacteria 11764
139 Ga0400483_279754 3300039062 Bacteria 139594
140 Ga0436361_1139888 3300039447 Bacteria 2858
141 Ga0451577_0210419 3300042876 Bacteria 1756
142 Ga0466966_0028965 3300044684 Bacteria 3605
143 Ga0453684_0076224 3300044712 Bacteria 4211
144 Ga0453684_0265821 3300044712 Bacteria 1963
145 Ga0466959_0006622 3300045049 Bacteria 8044
146 Ga0451576_0035587 3300045051 Bacteria 5281
147 Ga0451576_0069527 3300045051 Bacteria 3664
148 Ga0451576_0160173 3300045051 Bacteria 2348
149 Ga0495583_0000248 3300046506 Bacteria 89173
150 Ga0495606_0005546 3300046507 Bacteria 12036
151 Ga0495670_0005860 3300046691 Bacteria 6024
152 Ga0495686_0000566 3300047472 Bacteria 52625
153 Ga0495686_0007964 3300047472 Bacteria 7861
154 Ga0495686_0017898 3300047472 Bacteria 4764
155 Ga0496102_0000657 3300048905 Bacteria 34602
156 Ga0496103_0048307 3300048906 Bacteria 2630
157 Ga0496104_0156566 3300048907 Bacteria 2186
158 Ga0496110_0068135 3300048913 Bacteria 3149
159 Ga0496111_0014127 3300048914 Bacteria 5447
160 Ga0496119_0057124 3300048922 Bacteria 2360
161 Ga0496120_0002229 3300048923 Bacteria 20320
162 Ga0496121_0000112 3300048924 Bacteria 183480
163 Ga0496121_0000875 3300048924 Bacteria 54487
164 Ga0496121_0005746 3300048924 Bacteria 15753
165 Ga0496121_0006954 3300048924 Bacteria 13774
166 Ga0496121_0009795 3300048924 Bacteria 10947
167 Ga0496125_0000034 3300048928 Bacteria 348231
168 Ga0501033_0000230 3300049570 Bacteria 53911
169 Ga0501034_0181365 3300049571 Bacteria 2070
170 Ga0501036_0133962 3300049572 Bacteria 2091
171 Ga0501037_0000168 3300049573 Bacteria 61484
172 Ga0501040_0099646 3300049576 Bacteria 2026
173 Ga0501043_0000005 3300049579 Bacteria 254466
174 Ga0501047_0017705 3300049581 Bacteria 6824
175 Ga0501047_0072894 3300049581 Bacteria 3306
176 Ga0501069_0000011 3300049585 Bacteria 153214
177 Ga0501070_0000055 3300049586 Bacteria 99156
178 Ga0501073_0072766 3300049589 Bacteria 2394
179 Ga0501074_0000039 3300049590 Bacteria 60866
180 Ga0501076_0062740 3300049592 Bacteria 2960
181 Ga0501080_0003073 3300049742 Bacteria 14742
182 Ga0501083_0000180 3300049744 Bacteria 40737
183 Ga0501035_0000938 3300049822 Bacteria 30768
184 Ga0501044_0001322 3300049823 Bacteria 29176
185 nmdc:mga00v17_63_c1 3300050491 Bacteria 66457
186 nmdc:mga06z11_4675_c1 3300050494 Bacteria 5404
187 nmdc:mga05p37_1378_c1 3300050507 Bacteria 28265
188 nmdc:mga09592_239577_c1 3300050508 Bacteria 1572
189 nmdc:mga0qj67_1835_c1 3300050509 Bacteria 15047
190 nmdc:mga06r32_17742_c1 3300050510 Bacteria 6504
191 nmdc:mga06r32_208621_c1 3300050510 Bacteria 1941
192 nmdc:mga08y16_22614_c1 3300050511 Bacteria 6638
193 Ga0500578_0000541 3300053086 Bacteria 45881
194 Ga0500583_0000010 3300053092 Bacteria 160546
195 Ga0500555_000127 3300053103 Bacteria 36304
196 Ga0500562_000047 3300053108 Bacteria 62430
197 Ga0500594_0002237 3300053118 Bacteria 4192
198 Ga0500618_001597 3300053125 Bacteria 9849
199 Ga0500588_0010460 3300053146 Bacteria 2242
200 Ga0500622_0000823 3300053156 Bacteria 26546
201 2510843381 2510461069 Bacteria 5505000
202 2523466732 2523231067 Bacteria 5230452
203 2599720699 2599185236 Bacteria 6875203
204 2643813915 2643221558 Bacteria 5460675
205 2644297565 2643221653 Bacteria 4569637
206 2644655818 2643221719 Bacteria 4568197
207 2738728951 2738541278 Bacteria 9755573
208 2739351076 2738543031 Bacteria 5769731
209 2753765607 2751185897 Bacteria 5322941
210 2776267346 2775506902 Bacteria 6208009
211 2776281474 2775506904 Bacteria 5954060
212 2819683646 2818991461 Bacteria 7026071
213 2821127087 2821123053 Bacteria 7836056
214 2821449678 2821443989 Bacteria 7658172
215 2838740769 2838736955 Bacteria 5760694
216 2840768713 2840764183 Bacteria 6358399
217 2841844610 2841840854 Bacteria 5761912
218 2842144321 2842140634 Bacteria 5759631
219 2842905665 2842903701 Bacteria 6986368
220 2844539901 2844533157 Bacteria 7517899
221 2857534926 2857531043 Bacteria 6754041
222 2919680547 2919679072 Bacteria 4629602
223 2929142673 2929138655 Bacteria 5810547
224 3000406053 3000405567 Bacteria 3779330
225 8018154400 8018150411 Bacteria 5549903
226 8054568698 8054563764 Bacteria 5592885
227 Ga0316576_10004094
228 rootH1_10067642
229 Ga0065707_10002552
230 Ga0070658_10027027
231 Ga0070676_10032315
232 Ga0070683_100103507
233 Ga0070670_100106832
234 Ga0068869_100057442
235 Ga0070666_10009600
236 Ga0068868_100056196
237 Ga0070660_100010899
238 Ga0070660_100066361
239 Ga0070661_100027756
240 Ga0070669_100005941
241 Ga0070674_100014222
242 Ga0070688_100020124
243 Ga0070709_10068409
244 Ga0070714_100131057
245 Ga0070708_100132838
246 Ga0070663_100010683
247 Ga0070678_100010000
248 Ga0070678_100012445
249 Ga0070681_10089641
250 Ga0070665_100039808
251 Ga0070665_100060952
252 Ga0068855_100052844
253 Ga0068852_100016706
254 Ga0068859_100016675
255 Ga0068859_100048580
256 Ga0068851_10037413
257 Ga0068870_10024164
258 Ga0068860_100003144
259 Ga0068862_100005424
260 Ga0068862_100019521
261 Ga0081455_10038961
262 Ga0081540_1019376
263 Ga0070717_10000962
264 Ga0075364_10000076
265 Ga0075364_10011926
266 Ga0075367_10001979
267 Ga0075366_10002957
268 Ga0097621_100002026
269 Ga0097621_100179269
270 Ga0068871_100004891
271 Ga0068871_100019187
272 Ga0075428_100001093
273 Ga0075430_100005023
274 Ga0075430_100074980
275 Ga0075431_100003708
276 Ga0068865_100077678
277 Ga0068865_100194691
278 Ga0097620_100016675
279 Ga0097620_100048579
280 Ga0079104_1000123
281 Ga0105240_10061396
282 Ga0111539_10013557
283 Ga0111539_10023250
284 Ga0105247_10018707
285 Ga0114129_10001777
286 Ga0105243_10105271
287 Ga0105241_10008643
288 Ga0105242_10038163
289 Ga0105248_10019633
290 Ga0105248_10181666
291 Ga0105238_10026486
292 Ga0105033_100436
293 Ga0105239_10007813
294 Ga0105239_10198991
295 Ga0157370_10028638
296 Ga0157369_10019525
297 Ga0157369_10030340
298 Ga0157374_10005908
299 Ga0157374_10096624
300 Ga0157378_10000086
301 Ga0157378_10088301
302 Ga0163162_10010674
303 Ga0163162_10074731
304 Ga0157372_10170885
305 Ga0157375_10017390
306 Ga0157377_10002310
307 Ga0157379_10003094
308 Ga0157376_10002855
309 Ga0209130_1000880
310 Ga0209025_1000429
311 Ga0209758_1001704
312 Ga0207426_1000085
313 Ga0207680_10035083
314 Ga0207695_10047844
315 Ga0207693_10103397
316 Ga0207657_10012165
317 Ga0207681_10017834
318 Ga0207650_10142055
319 Ga0207664_10068109
320 Ga0207706_10029363
321 Ga0207709_10055381
322 Ga0207669_10014949
323 Ga0207711_10036545
324 Ga0207689_10043892
325 Ga0207667_10071989
326 Ga0207658_10023248
327 Ga0207639_10124676
328 Ga0207702_10048813
329 Ga0207702_10213636
330 Ga0207674_10000449
331 Ga0207674_10014932
332 Ga0207674_10024595
333 Ga0207675_100000139
334 Ga0207683_10010755
335 Ga0207683_10013940
336 Ga0207698_10031199
337 Ga0209281_1000251
338 Ga0207428_10009556
339 Ga0268266_10067078
340 Ga0268265_10007260
341 Ga0307517_10000005
342 Ga0316176_1139212
343 Ga0316181_1068791
344 Ga0265316_10006611
345 Ga0265316_10014791
346 Ga0307508_10000105
347 Ga0307508_10000575
348 Ga0307508_10093848
349 Ga0316575_10022984
350 Ga0316579_10000324
351 Ga0316576_10015368
352 Ga0316578_10008211
353 Ga0316577_10021405
354 Ga0316577_10026653
355 Ga0307415_100140568
356 Ga0307510_10114323
357 Ga0316574_0121008
358 Ga0316582_0010634
359 Ga0316582_0031266
360 Ga0316584_0002769
361 Ga0316584_0082978
362 Ga0316581_0000014
363 Ga0400483_083752
364 Ga0400483_206290
365 Ga0400483_279754
366 Ga0436361_1139888
367 Ga0451577_0210419
368 Ga0466966_0028965
369 Ga0453684_0076224
370 Ga0453684_0265821
371 Ga0466959_0006622
372 Ga0451576_0035587
373 Ga0451576_0069527
374 Ga0451576_0160173
375 Ga0495583_0000248
376 Ga0495606_0005546
377 Ga0495670_0005860
378 Ga0495686_0000566
379 Ga0495686_0007964
380 Ga0495686_0017898
381 Ga0496102_0000657
382 Ga0496103_0048307
383 Ga0496104_0156566
384 Ga0496110_0068135
385 Ga0496111_0014127
386 Ga0496119_0057124
387 Ga0496120_0002229
388 Ga0496121_0000112
389 Ga0496121_0000875
390 Ga0496121_0005746
391 Ga0496121_0006954
392 Ga0496121_0009795
393 Ga0496125_0000034
394 Ga0501033_0000230
395 Ga0501034_0181365
396 Ga0501036_0133962
397 Ga0501037_0000168
398 Ga0501040_0099646
399 Ga0501043_0000005
400 Ga0501047_0017705
401 Ga0501047_0072894
402 Ga0501069_0000011
403 Ga0501070_0000055
404 Ga0501073_0072766
405 Ga0501074_0000039
406 Ga0501076_0062740
407 Ga0501080_0003073
408 Ga0501083_0000180
409 Ga0501035_0000938
410 Ga0501044_0001322
411 nmdc:mga00v17_63_c1
412 nmdc:mga06z11_4675_c1
413 nmdc:mga05p37_1378_c1
414 nmdc:mga09592_239577_c1
415 nmdc:mga0qj67_1835_c1
416 nmdc:mga06r32_17742_c1
417 nmdc:mga06r32_208621_c1
418 nmdc:mga08y16_22614_c1
419 Ga0500578_0000541
420 Ga0500583_0000010
421 Ga0500555_000127
422 Ga0500562_000047
423 Ga0500594_0002237
424 Ga0500618_001597
425 Ga0500588_0010460
426 Ga0500622_0000823
427 2510843381
428 2523466732
429 2599720699
430 2643813915
431 2644297565
432 2644655818
433 2738728951
434 2739351076
435 2753765607
436 2776267346
437 2776281474
438 2819683646
439 2821127087
440 2821449678
441 2838740769
442 2840768713
443 2841844610
444 2842144321
445 2842905665
446 2844539901
447 2857534926
448 2919680547
449 2929142673
450 3000406053
451 8018154400
452 8054568698

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

36

185

0.95

PF00005

ABC_tran

ABC transporter

289

444

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gaj-assembly1.cif.gz_A crystal structure of a nucleotide-free atp-binding cassette from an abc transporter 0.9067 1 221
2it1-assembly1.cif.gz_B structure of ph0203 protein from pyrococcus horikoshii 0.8988 2 224
6z67-assembly3.cif.gz_E ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.8984 2 222
6b89-assembly1.cif.gz_A e. coli lptb in complex with adp and novobiocin 0.8913 2 233
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.8879 1 221
ID Description Score Start End Superfamily
af_P37388_2_240_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9849 2 236 3.40.50.300
af_Q6BEX0_1_254_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9703 2 240 3.40.50.300
af_P04983_1_243_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9652 2 238 3.40.50.300
af_P37388_2_240_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9645 2 236 3.40.50.300
af_P77509_7_245_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9586 2 234 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A353RC70-F1-model_v4 Ribose/galactose/methyl galactoside import ATP-binding protein (EC 7.5.2.11) 0.9831 2 236 GO:0005524
GO:0005886
GO:0016887
GO:0043211
AF-A0A1W2CIV3-F1-model_v4 Monosaccharide ABC transporter ATP-binding protein, CUT2 family 0.9809 2 234 GO:0005524
GO:0016887
AF-A0A419Z768-F1-model_v4 deleted 0.9807 2 234
AF-A0A1Y4EFB5-F1-model_v4 Sugar ABC transporter ATP-binding protein 0.9689 378 478 GO:0005524
GO:0016887
AF-A0A540W282-F1-model_v4 Sugar ABC transporter ATP-binding protein 0.9678 2 241 GO:0005524
GO:0016887

Map