F339057

General Info

Members Datasets Scaffolds Average Seq Length
226 162 452 455

Family's Representative Sequence

Representative Sequence 3300037312|Ga0395899_0044708|Ga0395899_0044708_586_1998
Length 470
Sequence VITQELAAYGYLISAICFIMALRGLSSPVTARGGNLYGIVGMIVAIGVTVSTPGIVSPWLIVVGLLIGGTVGTVVALRIQMTALPQLVAAFHSLVGLAAVFVAGAAFVSPEAFGIGTPGHIYTHSLVEMGLGTIIGAITFTGSIVAFAKLQGLVSGAPLVFRGQHPLNALIGIVLLLLLIWFTAAGHAVTFILLIVLSLAVGFLLILPIGGADMPVVVSMLNSYSGWAAAGIGFTLGNTALIVTGALVGSSGAILSYIMCKGMNRSIFNVILGGFGTDSSAAGGAAAVKHDRPVKAGSAEDAAFLMQNASSVIIVPGYGMAVAQAQHALREMADILKKGGVDVRYAIHPVAGRMPGHMNVLLAEANVPYDEVFELDDINRDFASTDVAFVIGANDVTNPAAKTDPKSPIYGMPILDVEKAQTVLFVKRGMSSGYAGVENELFFRDNTMMLFADAKVMCESIVKALEGSAH

Samples

Sample ID Description Type Environment
1 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
22 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
23 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
34 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
35 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
36 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
39 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
40 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
56 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
57 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
58 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
59 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
60 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
61 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
62 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
63 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
64 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
65 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
66 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
67 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
68 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
69 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
70 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
71 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
72 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
73 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
79 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
82 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
83 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
84 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
85 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
86 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
87 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
88 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
89 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
90 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
91 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
92 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
93 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
94 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
95 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
96 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
99 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
100 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
101 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
102 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
114 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
115 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
116 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
117 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
118 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
119 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
120 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
121 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
122 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
123 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
128 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
129 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
130 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
131 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
132 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
133 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
134 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
135 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
136 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
137 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
138 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
139 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
140 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
143 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
144 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
145 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
146 2671180139 Chelativorans sp. A52C2 Isolate Unclassified
147 2738541276 Cellvibrio sp. YR554 Isolate Unclassified
148 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
149 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
150 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
151 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
152 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
153 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
154 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
155 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
156 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
157 8016530956 Bradyrhizobium sp. LM6.11 Isolate Nodule
158 8016539877 Bradyrhizobium sp. LM6.10 Isolate Nodule
159 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
160 8016575299 Bradyrhizobium sp. LM2.9 Isolate Nodule
161 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
162 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.38
Metatranscriptomes 0
Isolates 10.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.41
Nodule 4.87
Rhizoplane 2.21
Rhizosphere 69.91
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395899_0044708 3300037312 Bacteria 3299
2 JGI25153J46596_10000081 3300003215 Bacteria 113081
3 Ga0065712_10078322 3300005290 Bacteria 3364
4 Ga0070658_10022409 3300005327 Bacteria 5068
5 Ga0070709_10027309 3300005434 Bacteria 3392
6 Ga0070705_100034750 3300005440 Bacteria 2820
7 Ga0070708_100032559 3300005445 Bacteria 4523
8 Ga0070663_100064872 3300005455 Bacteria 2641
9 Ga0070698_100000425 3300005471 Bacteria 45081
10 Ga0070698_100145201 3300005471 Bacteria 2322
11 Ga0070699_100091596 3300005518 Bacteria 2658
12 Ga0070684_100097981 3300005535 Bacteria 2616
13 Ga0070665_100006494 3300005548 Bacteria 11896
14 Ga0070665_100142440 3300005548 Bacteria 2400
15 Ga0068855_100020984 3300005563 Bacteria 7834
16 Ga0068856_100030232 3300005614 Bacteria 5295
17 Ga0068856_100046485 3300005614 Bacteria 4275
18 Ga0068856_100094978 3300005614 Bacteria 2969
19 Ga0068860_100012256 3300005843 Bacteria 8448
20 Ga0068862_100012535 3300005844 Bacteria 7018
21 Ga0081538_10017692 3300005981 Bacteria 5395
22 Ga0081538_10023910 3300005981 Bacteria 4373
23 Ga0081540_1063586 3300005983 Bacteria 1746
24 Ga0081539_10010112 3300005985 Bacteria 7740
25 Ga0070717_10037142 3300006028 Bacteria 3954
26 Ga0070717_10098201 3300006028 Bacteria 2482
27 Ga0070712_100042818 3300006175 Bacteria 3114
28 Ga0075362_10025851 3300006177 Bacteria 2503
29 Ga0075369_10000580 3300006186 Bacteria 11582
30 Ga0075431_100009080 3300006847 Bacteria 9967
31 Ga0075431_100106601 3300006847 Bacteria 2891
32 Ga0075434_100075139 3300006871 Bacteria 3373
33 Ga0075429_100055660 3300006880 Bacteria 3442
34 Ga0075435_100023372 3300007076 Bacteria 4780
35 Ga0105240_10073761 3300009093 Bacteria 4213
36 Ga0114129_10005469 3300009147 Bacteria 17954
37 Ga0114129_10204727 3300009147 Bacteria 2670
38 Ga0105238_10009596 3300009551 Bacteria 9685
39 Ga0099796_10001332 3300010159 Bacteria 4898
40 Ga0099796_10018730 3300010159 Bacteria 2085
41 Ga0105239_10286220 3300010375 Bacteria 1856
42 Ga0213872_10000577 3300021361 Bacteria 28396
43 Ga0213872_10031987 3300021361 Bacteria 2412
44 Ga0213875_10000098 3300021388 Bacteria 98684
45 Ga0213875_10001381 3300021388 Bacteria 15926
46 Ga0213875_10015636 3300021388 Bacteria 3691
47 Ga0213871_10001354 3300021441 Bacteria 4060
48 Ga0209148_1001385 3300025254 Bacteria 12545
49 Ga0209455_1000541 3300025272 Bacteria 26163
50 Ga0209675_1001609 3300025291 Bacteria 12726
51 Ga0209675_1008853 3300025291 Bacteria 3634
52 Ga0209758_1000061 3300025297 Bacteria 320172
53 Ga0209050_1008633 3300025298 Bacteria 5391
54 Ga0209257_1000368 3300025304 Bacteria 91038
55 Ga0207699_10054407 3300025906 Bacteria 2377
56 Ga0207707_10023652 3300025912 Bacteria 5373
57 Ga0207695_10143901 3300025913 Bacteria 2330
58 Ga0207693_10074537 3300025915 Bacteria 2658
59 Ga0207663_10092951 3300025916 Bacteria 2006
60 Ga0207660_10225997 3300025917 Bacteria 1470
61 Ga0207700_10029594 3300025928 Bacteria 3866
62 Ga0207661_10143584 3300025944 Bacteria 2056
63 Ga0207667_10090004 3300025949 Bacteria 3171
64 Ga0207678_10093815 3300026067 Bacteria 2564
65 Ga0268266_10002661 3300028379 Bacteria 18798
66 Ga0268265_10005222 3300028380 Bacteria 8895
67 Ga0268264_10019470 3300028381 Bacteria 5545
68 Ga0265337_1029760 3300028556 Bacteria 1631
69 Ga0265338_10004650 3300028800 Bacteria 18441
70 Ga0265338_10059294 3300028800 Bacteria 3372
71 Ga0265331_10014521 3300031250 Bacteria 4190
72 Ga0265316_10029488 3300031344 Bacteria 4510
73 Ga0307513_10089062 3300031456 Bacteria 3152
74 Ga0307408_100000005 3300031548 Bacteria 529098
75 Ga0307408_100000493 3300031548 Bacteria 34421
76 Ga0265313_10007489 3300031595 Bacteria 7445
77 Ga0265313_10010500 3300031595 Bacteria 5845
78 Ga0307508_10082084 3300031616 Bacteria 2805
79 Ga0265342_10018043 3300031712 Bacteria 4579
80 Ga0307406_10000214 3300031901 Bacteria 34819
81 Ga0307406_10017568 3300031901 Bacteria 4167
82 Ga0316583_10012938 3300032133 Bacteria 3009
83 Ga0307510_10080769 3300033180 Bacteria 3159
84 Ga0373923_0032856 3300035111 Bacteria 2098
85 Ga0373953_0011601 3300035117 Bacteria 3098
86 Ga0373954_0003425 3300035118 Bacteria 6724
87 Ga0373956_0027136 3300035119 Bacteria 2485
88 Ga0373955_0008745 3300035172 Bacteria 4715
89 Ga0373931_0007689 3300035691 Bacteria 5088
90 Ga0373931_0050250 3300035691 Bacteria 2218
91 Ga0373935_0094695 3300035692 Bacteria 1960
92 Ga0373937_0003444 3300036401 Bacteria 13281
93 Ga0373937_0024333 3300036401 Bacteria 5460
94 Ga0373925_0027847 3300037068 Bacteria 4137
95 Ga0395899_0002148 3300037312 Bacteria 16194
96 Ga0395900_0019561 3300037418 Bacteria 6903
97 Ga0395900_0023307 3300037418 Bacteria 6336
98 Ga0395900_0028234 3300037418 Bacteria 5747
99 Ga0395900_0154752 3300037418 Bacteria 2342
100 Ga0395898_0011185 3300037466 Bacteria 9343
101 Ga0395898_0011956 3300037466 Bacteria 8986
102 Ga0395905_0172465 3300037471 Bacteria 2032
103 Ga0436364_0102834 3300037853 Bacteria 1596
104 Ga0436364_0287258 3300037853 Bacteria 2997
105 Ga0436364_0409206 3300037853 Bacteria 1302
106 Ga0436364_0616684 3300037853 Bacteria 34041
107 Ga0436364_1390920 3300037853 Bacteria 113944
108 Ga0395901_0045666 3300038443 Bacteria 4547
109 Ga0395901_0062955 3300038443 Bacteria 3861
110 Ga0395901_0146149 3300038443 Bacteria 2485
111 Ga0395901_0192375 3300038443 Bacteria 2139
112 Ga0400485_22349 3300038735 Bacteria 174815
113 Ga0400488_40707 3300038741 Bacteria 11570
114 Ga0400486_19188 3300038742 Bacteria 196185
115 Ga0400487_19710 3300039110 Bacteria 103852
116 Ga0436365_0081268 3300039437 Bacteria 2248
117 Ga0436365_0447477 3300039437 Bacteria 4802
118 Ga0436365_1524629 3300039437 Bacteria 3791
119 Ga0436360_0713874 3300039438 Bacteria 2622
120 Ga0436360_0849384 3300039438 Bacteria 4153
121 Ga0436361_0148937 3300039447 Bacteria 3484
122 Ga0436361_0375914 3300039447 Bacteria 18209
123 Ga0436363_1592937 3300039450 Bacteria 2417
124 Ga0436362_0925319 3300039453 Bacteria 2876
125 Ga0439434_0020930 3300042435 Bacteria 1965
126 Ga0453684_0007990 3300044712 Bacteria 19168
127 Ga0466967_0020510 3300045976 Bacteria 5345
128 Ga0495580_0041722 3300046472 Bacteria 3271
129 Ga0495586_0057435 3300046535 Bacteria 2112
130 Ga0495667_0015722 3300046559 Bacteria 5116
131 Ga0496102_0080336 3300048905 Bacteria 3004
132 Ga0496104_0093823 3300048907 Bacteria 2871
133 Ga0496110_0286999 3300048913 Bacteria 1499
134 Ga0496112_0037432 3300048915 Bacteria 4736
135 Ga0496112_0257487 3300048915 Bacteria 1695
136 Ga0496122_0040618 3300048925 Bacteria 3693
137 Ga0496126_0031320 3300048929 Bacteria 5028
138 Ga0496126_0098710 3300048929 Bacteria 2559
139 Ga0501032_0000002 3300049569 Bacteria 335417
140 Ga0501032_0022383 3300049569 Bacteria 4381
141 Ga0501033_0003325 3300049570 Bacteria 13280
142 Ga0501033_0248691 3300049570 Bacteria 1261
143 Ga0501034_0000001 3300049571 Bacteria 2184493
144 Ga0501034_0083623 3300049571 Bacteria 3193
145 Ga0501034_0151173 3300049571 Bacteria 2297
146 Ga0501034_0182479 3300049571 Bacteria 2063
147 Ga0501036_0013449 3300049572 Bacteria 6802
148 Ga0501038_0008838 3300049574 Bacteria 9241
149 Ga0501039_0000006 3300049575 Bacteria 278135
150 Ga0501039_0030747 3300049575 Bacteria 4140
151 Ga0501040_0012392 3300049576 Bacteria 5586
152 Ga0501043_0028304 3300049579 Bacteria 4399
153 Ga0501046_0004964 3300049580 Bacteria 11940
154 Ga0501046_0046768 3300049580 Bacteria 3433
155 Ga0501046_0149438 3300049580 Bacteria 1763
156 Ga0501047_0012017 3300049581 Bacteria 8193
157 Ga0501047_0040548 3300049581 Bacteria 4503
158 Ga0501048_0095593 3300049582 Bacteria 2095
159 Ga0501048_0184211 3300049582 Bacteria 1480
160 Ga0501068_0103124 3300049584 Bacteria 1769
161 Ga0501068_0117746 3300049584 Bacteria 1655
162 Ga0501069_0002061 3300049585 Bacteria 10103
163 Ga0501070_0000382 3300049586 Bacteria 40489
164 Ga0501073_0000489 3300049589 Bacteria 27601
165 Ga0501073_0028967 3300049589 Bacteria 3956
166 Ga0501073_0038324 3300049589 Bacteria 3400
167 Ga0501074_0004900 3300049590 Bacteria 9598
168 Ga0501074_0011512 3300049590 Bacteria 6431
169 Ga0501075_0064526 3300049591 Bacteria 2762
170 Ga0501076_0006903 3300049592 Bacteria 8250
171 Ga0501079_0040241 3300049741 Bacteria 3605
172 Ga0501080_0015394 3300049742 Bacteria 7050
173 Ga0501080_0046306 3300049742 Bacteria 4049
174 Ga0501083_0002162 3300049744 Bacteria 13479
175 Ga0501083_0013531 3300049744 Bacteria 5704
176 Ga0501035_0030929 3300049822 Bacteria 4876
177 Ga0501044_0002719 3300049823 Bacteria 20109
178 Ga0501044_0010798 3300049823 Bacteria 9907
179 Ga0501044_0136973 3300049823 Bacteria 2439
180 Ga0501045_0018390 3300049824 Bacteria 4971
181 nmdc:mga05p37_12963_c1 3300050507 Bacteria 9972
182 nmdc:mga09592_113386_c1 3300050508 Bacteria 2326
183 nmdc:mga0qj67_2226_c1 3300050509 Bacteria 13783
184 nmdc:mga06r32_152261_c1 3300050510 Bacteria 2292
185 nmdc:mga06r32_71376_c1 3300050510 Bacteria 3360
186 nmdc:mga0n895_123608_c1 3300050512 Bacteria 2610
187 nmdc:mga0rr50_47575_c1 3300050513 Bacteria 3165
188 nmdc:mga08x19_39165_c1 3300050514 Bacteria 3013
189 nmdc:mga0sz30_756_c1 3300050516 Bacteria 11815
190 Ga0495601_0015541 3300053077 Bacteria 4600
191 Ga0500651_0092858 3300053093 Bacteria 1856
192 Ga0500641_0001507 3300053096 Bacteria 8327
193 Ga0500641_0003725 3300053096 Bacteria 5385
194 Ga0500642_0000290 3300053130 Bacteria 18342
195 Ga0500642_0041560 3300053130 Bacteria 1989
196 Ga0500588_0002880 3300053146 Bacteria 3571
197 Ga0500616_0000844 3300053153 Bacteria 34369
198 Ga0500609_000069 3300053731 Bacteria 13450
199 Ga0501084_0012983 3300054114 Bacteria 6894
200 Ga0501084_0013489 3300054114 Bacteria 6763
201 Ga0501082_0004860 3300060353 Bacteria 11721
202 Ga0530510_0008547 3300061734 Bacteria 7146
203 2512036155 2511231221 Bacteria 6846400
204 2512038266 2511231221 Bacteria 6846400
205 2599101288 2597490356 Bacteria 7030811
206 2599101594 2597490356 Bacteria 7030811
207 2671691826 2671180139 Bacteria 4196045
208 2738714597 2738541276 Bacteria 4690596
209 2821451220 2821443989 Bacteria 7658172
210 2842336059 2842333319 Bacteria 8899485
211 2846953681 2846952575 Bacteria 6587527
212 2846953990 2846952575 Bacteria 6587527
213 2848859836 2848858292 Bacteria 7391279
214 2848860135 2848858292 Bacteria 7391279
215 2935770430 2935769743 Bacteria 7878163
216 2935786517 2935785616 Bacteria 7962367
217 2935794572 2935793552 Bacteria 8012592
218 643597989 643348564 Bacteria 8839022
219 8016524559 8016522445 Bacteria 8156687
220 8016538121 8016530956 Bacteria 8155261
221 8016542398 8016539877 Bacteria 8155419
222 8016559290 8016557553 Bacteria 8154380
223 8016580477 8016575299 Bacteria 8154085
224 8016597238 8016595262 Bacteria 8149947
225 8054002445 8054002106 Bacteria 7987183
226 8054008548 8054002106 Bacteria 7987183
227 Ga0395899_0044708
228 JGI25153J46596_10000081
229 Ga0065712_10078322
230 Ga0070658_10022409
231 Ga0070709_10027309
232 Ga0070705_100034750
233 Ga0070708_100032559
234 Ga0070663_100064872
235 Ga0070698_100000425
236 Ga0070698_100145201
237 Ga0070699_100091596
238 Ga0070684_100097981
239 Ga0070665_100006494
240 Ga0070665_100142440
241 Ga0068855_100020984
242 Ga0068856_100030232
243 Ga0068856_100046485
244 Ga0068856_100094978
245 Ga0068860_100012256
246 Ga0068862_100012535
247 Ga0081538_10017692
248 Ga0081538_10023910
249 Ga0081540_1063586
250 Ga0081539_10010112
251 Ga0070717_10037142
252 Ga0070717_10098201
253 Ga0070712_100042818
254 Ga0075362_10025851
255 Ga0075369_10000580
256 Ga0075431_100009080
257 Ga0075431_100106601
258 Ga0075434_100075139
259 Ga0075429_100055660
260 Ga0075435_100023372
261 Ga0105240_10073761
262 Ga0114129_10005469
263 Ga0114129_10204727
264 Ga0105238_10009596
265 Ga0099796_10001332
266 Ga0099796_10018730
267 Ga0105239_10286220
268 Ga0213872_10000577
269 Ga0213872_10031987
270 Ga0213875_10000098
271 Ga0213875_10001381
272 Ga0213875_10015636
273 Ga0213871_10001354
274 Ga0209148_1001385
275 Ga0209455_1000541
276 Ga0209675_1001609
277 Ga0209675_1008853
278 Ga0209758_1000061
279 Ga0209050_1008633
280 Ga0209257_1000368
281 Ga0207699_10054407
282 Ga0207707_10023652
283 Ga0207695_10143901
284 Ga0207693_10074537
285 Ga0207663_10092951
286 Ga0207660_10225997
287 Ga0207700_10029594
288 Ga0207661_10143584
289 Ga0207667_10090004
290 Ga0207678_10093815
291 Ga0268266_10002661
292 Ga0268265_10005222
293 Ga0268264_10019470
294 Ga0265337_1029760
295 Ga0265338_10004650
296 Ga0265338_10059294
297 Ga0265331_10014521
298 Ga0265316_10029488
299 Ga0307513_10089062
300 Ga0307408_100000005
301 Ga0307408_100000493
302 Ga0265313_10007489
303 Ga0265313_10010500
304 Ga0307508_10082084
305 Ga0265342_10018043
306 Ga0307406_10000214
307 Ga0307406_10017568
308 Ga0316583_10012938
309 Ga0307510_10080769
310 Ga0373923_0032856
311 Ga0373953_0011601
312 Ga0373954_0003425
313 Ga0373956_0027136
314 Ga0373955_0008745
315 Ga0373931_0007689
316 Ga0373931_0050250
317 Ga0373935_0094695
318 Ga0373937_0003444
319 Ga0373937_0024333
320 Ga0373925_0027847
321 Ga0395899_0002148
322 Ga0395900_0019561
323 Ga0395900_0023307
324 Ga0395900_0028234
325 Ga0395900_0154752
326 Ga0395898_0011185
327 Ga0395898_0011956
328 Ga0395905_0172465
329 Ga0436364_0102834
330 Ga0436364_0287258
331 Ga0436364_0409206
332 Ga0436364_0616684
333 Ga0436364_1390920
334 Ga0395901_0045666
335 Ga0395901_0062955
336 Ga0395901_0146149
337 Ga0395901_0192375
338 Ga0400485_22349
339 Ga0400488_40707
340 Ga0400486_19188
341 Ga0400487_19710
342 Ga0436365_0081268
343 Ga0436365_0447477
344 Ga0436365_1524629
345 Ga0436360_0713874
346 Ga0436360_0849384
347 Ga0436361_0148937
348 Ga0436361_0375914
349 Ga0436363_1592937
350 Ga0436362_0925319
351 Ga0439434_0020930
352 Ga0453684_0007990
353 Ga0466967_0020510
354 Ga0495580_0041722
355 Ga0495586_0057435
356 Ga0495667_0015722
357 Ga0496102_0080336
358 Ga0496104_0093823
359 Ga0496110_0286999
360 Ga0496112_0037432
361 Ga0496112_0257487
362 Ga0496122_0040618
363 Ga0496126_0031320
364 Ga0496126_0098710
365 Ga0501032_0000002
366 Ga0501032_0022383
367 Ga0501033_0003325
368 Ga0501033_0248691
369 Ga0501034_0000001
370 Ga0501034_0083623
371 Ga0501034_0151173
372 Ga0501034_0182479
373 Ga0501036_0013449
374 Ga0501038_0008838
375 Ga0501039_0000006
376 Ga0501039_0030747
377 Ga0501040_0012392
378 Ga0501043_0028304
379 Ga0501046_0004964
380 Ga0501046_0046768
381 Ga0501046_0149438
382 Ga0501047_0012017
383 Ga0501047_0040548
384 Ga0501048_0095593
385 Ga0501048_0184211
386 Ga0501068_0103124
387 Ga0501068_0117746
388 Ga0501069_0002061
389 Ga0501070_0000382
390 Ga0501073_0000489
391 Ga0501073_0028967
392 Ga0501073_0038324
393 Ga0501074_0004900
394 Ga0501074_0011512
395 Ga0501075_0064526
396 Ga0501076_0006903
397 Ga0501079_0040241
398 Ga0501080_0015394
399 Ga0501080_0046306
400 Ga0501083_0002162
401 Ga0501083_0013531
402 Ga0501035_0030929
403 Ga0501044_0002719
404 Ga0501044_0010798
405 Ga0501044_0136973
406 Ga0501045_0018390
407 nmdc:mga05p37_12963_c1
408 nmdc:mga09592_113386_c1
409 nmdc:mga0qj67_2226_c1
410 nmdc:mga06r32_152261_c1
411 nmdc:mga06r32_71376_c1
412 nmdc:mga0n895_123608_c1
413 nmdc:mga0rr50_47575_c1
414 nmdc:mga08x19_39165_c1
415 nmdc:mga0sz30_756_c1
416 Ga0495601_0015541
417 Ga0500651_0092858
418 Ga0500641_0001507
419 Ga0500641_0003725
420 Ga0500642_0000290
421 Ga0500642_0041560
422 Ga0500588_0002880
423 Ga0500616_0000844
424 Ga0500609_000069
425 Ga0501084_0012983
426 Ga0501084_0013489
427 Ga0501082_0004860
428 Ga0530510_0008547
429 2512036155
430 2512038266
431 2599101288
432 2599101594
433 2671691826
434 2738714597
435 2821451220
436 2842336059
437 2846953681
438 2846953990
439 2848859836
440 2848860135
441 2935770430
442 2935786517
443 2935794572
444 643597989
445 8016524559
446 8016538121
447 8016542398
448 8016559290
449 8016580477
450 8016597238
451 8054002445
452 8054008548

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02233

PNTB

NAD(P) transhydrogenase beta subunit

7

464

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nm5-assembly1.cif.gz_C r. rubrum transhydrogenase (di.q132n)2(diii)1 asymmetric complex 0.9656 283 456
2fsv-assembly1.cif.gz_C structure of transhydrogenase (di.d135n.nad+)2(diii.e155w.nadp+)1 asymmetric complex 0.963 283 456
1nm5-assembly1.cif.gz_C r. rubrum transhydrogenase (di.q132n)2(diii)1 asymmetric complex 0.9602 283 456
2fsv-assembly1.cif.gz_C structure of transhydrogenase (di.d135n.nad+)2(diii.e155w.nadp+)1 asymmetric complex 0.9576 283 456
1d4o-assembly1.cif.gz_A crystal structure of transhydrogenase domain iii at 1.2 angstroms resolution 0.9536 284 455
ID Description Score Start End Superfamily
2bruC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9021 290 454 3.40.50.1220
2bruC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.887 290 454 3.40.50.1220
1e3tA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.8607 282 456 3.40.50.1220
1e3tA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.8563 282 456 3.40.50.1220
af_Q9LF46_203_356_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.6997 289 453 3.40.50.1220
ID Description Score Start End GO Terms
AF-A0A7C1YC62-F1-model_v4 proton-translocating NAD(P)(+) transhydrogenase (EC 7.1.1.1) 0.9945 370 456 GO:0008750
GO:0016020
GO:0016491
AF-A0A828A5S1-F1-model_v4 deleted 0.994 362 454
AF-A0A1Q4C1X0-F1-model_v4 proton-translocating NAD(P)(+) transhydrogenase (EC 7.1.1.1) 0.9933 348 453 GO:0008750
GO:0016020
AF-A0A6G3V3N8-F1-model_v4 deleted 0.9928 363 455
AF-A0A2U1XI63-F1-model_v4 proton-translocating NAD(P)(+) transhydrogenase (EC 7.1.1.1) 0.9926 348 455 GO:0008750
GO:0016020

Map