F339194

General Info

Members Datasets Scaffolds Average Seq Length
226 160 192 464

Family's Representative Sequence

Representative Sequence 3300046529|Ga0495652_0024786|Ga0495652_0024786_3495_5102
Length 513
Sequence MSFSAIRKPFAKARARPDVSRFGTVADHHGHGIPAAQLTLSRHPPRELIGSMPTTDQDALTSLSTQAARNLATTTKTVPQMQGISSRWLLRKLPWVNVSSGTYRVNRRLSLAVGRGRVAFEQNGADDIRIIPGTLRELPILRGFADEELLGELAAGFRPREFRAGDVLAGQGDPIAEVFIIAHGRVELIGNLRYGTSGVVRVVADGHSLGDELTAQDGEPVWAHTLKATTSGTLMALPRATFQRLYDESPALRQQLADFQANAQRPTDKKGQASIDLSAGHAGEPVLPGTFVDYDLTPREYELSLTQTVLRVHTRVADLYNNPMNQTEEQLRLTVEAIREREEWELLNNREFGLLHNADYDQRINTHSGPPTPDDMDNLLSMRRSTKMFLAHPKTIAAFFRECNKRGLYVDAVNIDDHRIPAWRGVPIYPCGKIPISDTHTSSVLALRTGEDNQGVVGLHQTGIPDEYSPSLNVRFMGVDEKAILSYLVTAYYSTAILVPDAIGVLENAEIAS

Samples

Sample ID Description Type Environment
1 2558860280 Kutzneria sp. 744 Isolate Unclassified
2 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
3 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
4 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
5 2643221647 Streptomyces sp. Root369 Isolate Unclassified
6 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
7 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
8 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
9 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
10 2808606448 Streptomyces sp. 193411 Isolate Unclassified
11 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
12 2862574272 Streptomyces sp. AcE210 Isolate Nodule
13 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
14 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
15 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
16 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
17 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
18 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
19 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
20 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
21 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
22 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
23 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
24 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
25 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
26 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
28 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
29 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
30 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
31 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
47 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
48 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
49 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
50 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
52 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
60 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
61 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
62 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
63 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
64 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
65 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
66 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
67 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
68 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
69 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
70 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
71 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
72 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
73 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
74 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
75 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
76 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
77 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
78 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
79 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
80 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
81 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
82 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
83 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
84 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
85 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
86 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
87 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
88 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
89 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
90 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
91 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
92 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
93 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
94 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
95 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
96 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
97 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
98 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
99 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
100 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
101 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
102 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
103 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
104 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
105 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
106 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
107 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
108 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
109 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
110 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
111 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
112 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
113 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
114 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
117 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
118 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
119 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
120 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
121 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
122 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
123 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
124 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
125 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
126 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
127 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
128 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
131 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
132 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
133 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
134 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
135 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
136 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
137 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
138 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
139 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
140 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
152 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
153 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
154 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
155 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
156 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
157 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
158 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
159 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere
160 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.07
Metatranscriptomes 0.88
Isolates 15.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.65
Nodule 1.33
Rhizoplane 0.44
Rhizosphere 77.43
Stem 0
Stem Tuber 0
Unclassified 18.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10003468 3300003203 Bacteria 7413
2 rootH1_10000057 3300003316 Bacteria 5133
3 rootH1_10004151 3300003316 Bacteria 24173
4 rootL2_10027534 3300003322 Bacteria 4237
5 JGI25160J50197_1008633 3300003354 Bacteria 3865
6 Ga0006562J51391_1066242 3300003578 Bacteria 3210
7 Ga0070663_100063486 3300005455 Bacteria 2667
8 Ga0068853_100010625 3300005539 Bacteria 7448
9 Ga0070665_100028855 3300005548 Bacteria 5586
10 Ga0068855_100001720 3300005563 Bacteria 27360
11 Ga0068852_100163852 3300005616 Bacteria 2078
12 Ga0081455_10036976 3300005937 Bacteria 4340
13 Ga0081539_10000257 3300005985 Bacteria 122507
14 Ga0075365_10049431 3300006038 Bacteria 2771
15 Ga0105240_10011261 3300009093 Bacteria 12469
16 Ga0105241_10005415 3300009174 Bacteria 9434
17 Ga0105237_10097548 3300009545 Bacteria 2929
18 Ga0105238_10021383 3300009551 Bacteria 6591
19 Ga0105238_10029764 3300009551 Bacteria 5562
20 Ga0105246_10186831 3300011119 Bacteria 1600
21 Ga0157369_10036770 3300013105 Bacteria 5363
22 Ga0157374_10068509 3300013296 Bacteria 3339
23 Ga0182008_10001515 3300014497 Bacteria 15517
24 Ga0182007_10000291 3300015262 Bacteria 32565
25 Ga0182005_1008033 3300015265 Bacteria 3130
26 Ga0213875_10026834 3300021388 Bacteria 2739
27 Ga0224712_10026936 3300022467 Bacteria 2039
28 Ga0207426_1000716 3300025302 Bacteria 38582
29 Ga0207426_1004760 3300025302 Bacteria 6459
30 Ga0207647_10054165 3300025904 Bacteria 2468
31 Ga0207654_10025355 3300025911 Bacteria 3198
32 Ga0207695_10003000 3300025913 Bacteria 24258
33 Ga0207671_10000631 3300025914 Bacteria 46289
34 Ga0207694_10020906 3300025924 Bacteria 4955
35 Ga0207694_10044514 3300025924 Bacteria 3427
36 Ga0207667_10105405 3300025949 Bacteria 2908
37 Ga0207678_10023767 3300026067 Bacteria 5360
38 Ga0307517_10006976 3300028786 Bacteria 16599
39 Ga0307515_10000995 3300028794 Bacteria 64758
40 Ga0307511_10000145 3300030521 Bacteria 66808
41 Ga0307511_10002051 3300030521 Bacteria 21091
42 Ga0307511_10012524 3300030521 Bacteria 8319
43 Ga0307512_10028452 3300030522 Bacteria 4900
44 Ga0307509_10004141 3300031507 Bacteria 21188
45 Ga0307509_10019414 3300031507 Bacteria 7753
46 Ga0307508_10057487 3300031616 Bacteria 3442
47 Ga0307514_10057441 3300031649 Bacteria 2981
48 Ga0307516_10009394 3300031730 Bacteria 10908
49 Ga0307518_10061542 3300031838 Bacteria 2726
50 Ga0307410_10070387 3300031852 Bacteria 2423
51 Ga0307507_10018632 3300033179 Bacteria 7876
52 Ga0307510_10002773 3300033180 Bacteria 20078
53 Ga0307510_10010384 3300033180 Bacteria 11060
54 Ga0395900_0104243 3300037418 Bacteria 2914
55 Ga0395898_0010345 3300037466 Bacteria 9758
56 Ga0395898_0039959 3300037466 Bacteria 4641
57 Ga0436364_0850801 3300037853 Bacteria 4080
58 Ga0451837_0845674 3300041494 Bacteria 2221
59 Ga0451853_2674783 3300041512 Bacteria 2367
60 Ga0451853_2707819 3300041512 Bacteria 7620
61 Ga0439458_0017807 3300042157 Bacteria 1624
62 Ga0466969_0001384 3300044656 Bacteria 13079
63 Ga0466969_0002786 3300044656 Bacteria 9337
64 Ga0466969_0012277 3300044656 Bacteria 4522
65 Ga0466969_0081605 3300044656 Bacteria 1542
66 Ga0466966_0001245 3300044684 Bacteria 16320
67 Ga0466966_0004371 3300044684 Bacteria 9325
68 Ga0466966_0019881 3300044684 Bacteria 4416
69 Ga0466966_0061564 3300044684 Bacteria 2367
70 Ga0466966_0122138 3300044684 Bacteria 1599
71 Ga0466961_0018409 3300044693 Bacteria 4492
72 Ga0466961_0025944 3300044693 Bacteria 3767
73 Ga0466961_0044707 3300044693 Bacteria 2834
74 Ga0466961_0046603 3300044693 Bacteria 2772
75 Ga0466961_0052682 3300044693 Bacteria 2597
76 Ga0466961_0104992 3300044693 Bacteria 1779
77 Ga0466971_0002894 3300044719 Bacteria 7279
78 Ga0466968_0083947 3300044735 Bacteria 1404
79 Ga0466970_0002519 3300044765 Bacteria 8835
80 Ga0466970_0017326 3300044765 Bacteria 3722
81 Ga0466959_0009075 3300045049 Bacteria 7057
82 Ga0466959_0021740 3300045049 Bacteria 4735
83 Ga0466958_0023455 3300045836 Bacteria 3623
84 Ga0466958_0061612 3300045836 Bacteria 2286
85 Ga0466967_0072154 3300045976 Bacteria 3093
86 Ga0466967_0256715 3300045976 Bacteria 1671
87 Ga0495617_014775 3300046452 Bacteria 2652
88 Ga0495592_0020921 3300046454 Bacteria 4976
89 Ga0495603_0016500 3300046455 Bacteria 4468
90 Ga0495629_0025061 3300046459 Bacteria 4242
91 Ga0495629_0060440 3300046459 Bacteria 2649
92 Ga0495651_0001529 3300046462 Bacteria 17891
93 Ga0495651_0006989 3300046462 Bacteria 8630
94 Ga0495651_0025531 3300046462 Bacteria 4599
95 Ga0495653_0039067 3300046463 Bacteria 3720
96 Ga0495605_0012460 3300046474 Bacteria 4717
97 Ga0495662_0005457 3300046476 Bacteria 6365
98 Ga0495664_0012536 3300046477 Bacteria 4803
99 Ga0495664_0033008 3300046477 Bacteria 3041
100 Ga0495664_0131875 3300046477 Bacteria 1513
101 Ga0495594_0006626 3300046499 Bacteria 5958
102 Ga0495606_0025116 3300046507 Bacteria 4275
103 Ga0495608_0009045 3300046511 Bacteria 6969
104 Ga0495616_0014238 3300046513 Bacteria 4460
105 Ga0495618_0036620 3300046514 Bacteria 3079
106 Ga0495620_0016029 3300046515 Bacteria 3771
107 Ga0495620_0073887 3300046515 Bacteria 1389
108 Ga0495628_0005371 3300046516 Bacteria 11235
109 Ga0495631_0003045 3300046518 Bacteria 9261
110 Ga0495643_0006221 3300046522 Bacteria 7919
111 Ga0495666_0002672 3300046526 Bacteria 8892
112 Ga0495666_0008864 3300046526 Bacteria 5039
113 Ga0495652_0024786 3300046529 Bacteria 5309
114 Ga0495652_0092302 3300046529 Bacteria 2473
115 Ga0495665_0013746 3300046531 Bacteria 4371
116 Ga0495640_0038827 3300046533 Bacteria 3346
117 Ga0495586_0003310 3300046535 Bacteria 8644
118 Ga0495645_0019112 3300046543 Bacteria 4931
119 Ga0495645_0034092 3300046543 Bacteria 3715
120 Ga0495645_0114413 3300046543 Bacteria 1906
121 Ga0495622_0001516 3300046557 Bacteria 11601
122 Ga0495667_0005230 3300046559 Bacteria 8773
123 Ga0495668_0034018 3300046616 Bacteria 2861
124 Ga0495634_0070017 3300046642 Bacteria 2313
125 Ga0495611_0067523 3300046648 Bacteria 1631
126 Ga0495625_0032028 3300046660 Bacteria 3905
127 Ga0495625_0055197 3300046660 Bacteria 2833
128 Ga0495625_0078925 3300046660 Bacteria 2297
129 Ga0495635_0006515 3300046663 Bacteria 8145
130 Ga0495661_0058048 3300046665 Bacteria 2308
131 Ga0495588_0006659 3300046674 Bacteria 5217
132 Ga0495657_0014050 3300046675 Bacteria 5881
133 Ga0495657_0024601 3300046675 Bacteria 4286
134 Ga0495623_0037157 3300046679 Bacteria 3118
135 Ga0495623_0060254 3300046679 Bacteria 2381
136 Ga0495646_0007998 3300046680 Bacteria 6718
137 Ga0495646_0009263 3300046680 Bacteria 6247
138 Ga0495613_0003382 3300046689 Bacteria 11921
139 Ga0495671_0004298 3300046692 Bacteria 8561
140 Ga0495671_0019594 3300046692 Bacteria 3574
141 Ga0495589_0020675 3300046794 Bacteria 3365
142 Ga0495589_0027669 3300046794 Bacteria 2866
143 Ga0495600_0017952 3300046809 Bacteria 4503
144 Ga0495600_0100505 3300046809 Bacteria 1885
145 Ga0495600_0124596 3300046809 Bacteria 1676
146 Ga0495660_0043770 3300046810 Bacteria 2466
147 Ga0495581_0007787 3300047315 Bacteria 6202
148 Ga0495604_0003816 3300047317 Bacteria 11996
149 Ga0495674_0086850 3300047319 Bacteria 2677
150 Ga0495676_0030050 3300047321 Bacteria 4618
151 Ga0495676_0075237 3300047321 Bacteria 2583
152 Ga0495687_001141 3300047443 Bacteria 25731
153 Ga0495687_022238 3300047443 Bacteria 3048
154 Ga0495687_040516 3300047443 Bacteria 2051
155 Ga0495675_0080790 3300047444 Bacteria 2047
156 Ga0495681_0004315 3300047470 Bacteria 9726
157 Ga0495593_0072412 3300047673 Bacteria 1789
158 Ga0495602_0053702 3300048088 Bacteria 3565
159 Ga0495614_0058203 3300048089 Bacteria 1659
160 Ga0495626_0042226 3300048091 Bacteria 2143
161 Ga0496106_0144614 3300048909 Bacteria 1872
162 Ga0495678_008953 3300049459 Bacteria 5003
163 Ga0501031_0024918 3300049568 Bacteria 3902
164 Ga0501033_0005759 3300049570 Bacteria 9756
165 Ga0501034_0014990 3300049571 Bacteria 7973
166 Ga0501034_0015003 3300049571 Bacteria 7969
167 Ga0501036_0008789 3300049572 Bacteria 8293
168 Ga0501038_0113129 3300049574 Bacteria 2246
169 Ga0501043_0002864 3300049579 Bacteria 14405
170 Ga0501043_0020141 3300049579 Bacteria 5236
171 Ga0501043_0042789 3300049579 Bacteria 3559
172 Ga0501046_0139091 3300049580 Bacteria 1839
173 Ga0501047_0031184 3300049581 Bacteria 5141
174 Ga0501047_0041310 3300049581 Bacteria 4456
175 Ga0501047_0067946 3300049581 Bacteria 3433
176 Ga0501047_0168909 3300049581 Bacteria 2057
177 Ga0501035_0050839 3300049822 Bacteria 3713
178 Ga0501044_0006941 3300049823 Bacteria 12464
179 Ga0501044_0015917 3300049823 Bacteria 8093
180 Ga0501044_0031794 3300049823 Bacteria 5550
181 Ga0501044_0062871 3300049823 Bacteria 3793
182 Ga0501044_0241218 3300049823 Bacteria 1751
183 Ga0501045_0133878 3300049824 Bacteria 1843
184 Ga0495601_0003849 3300053077 Bacteria 8637
185 Ga0495612_0007790 3300053078 Bacteria 4370
186 Ga0495619_0038534 3300053085 Bacteria 3118
187 Ga0500560_002760 3300053107 Bacteria 3429
188 Ga0500559_0007924 3300053136 Bacteria 4684
189 Ga0466962_0000980 3300061719 Bacteria 12990
190 Ga0466962_0001016 3300061719 Bacteria 12815
191 Ga0466962_0029857 3300061719 Bacteria 2610
192 Ga0466962_0059783 3300061719 Bacteria 1819

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2558860280 2559427289 382
2 3300053107 Ga0500560_002760 Ga0500560_002760_44_1351 395
3 3300046543 Ga0495645_0034092 Ga0495645_0034092_2278_3660 411
4 3300047444 Ga0495675_0080790 Ga0495675_0080790_608_1990 411
5 3300045049 Ga0466959_0009075 Ga0466959_0009075_2894_4315 414
6 3300046474 Ga0495605_0012460 Ga0495605_0012460_3419_4693 414
7 3300046648 Ga0495611_0067523 Ga0495611_0067523_341_1615 414
8 3300049459 Ga0495678_008953 Ga0495678_008953_3718_4992 414
9 3300061719 Ga0466962_0000980 Ga0466962_0000980_8272_9693 414
10 3300046455 Ga0495603_0016500 Ga0495603_0016500_1204_2511 425
11 3300046459 Ga0495629_0060440 Ga0495629_0060440_342_1649 425
12 3300046477 Ga0495664_0131875 Ga0495664_0131875_17_1318 425
13 3300046499 Ga0495594_0006626 Ga0495594_0006626_1204_2511 425
14 3300046507 Ga0495606_0025116 Ga0495606_0025116_1650_2957 425
15 3300046513 Ga0495616_0014238 Ga0495616_0014238_289_1596 425
16 3300046515 Ga0495620_0016029 Ga0495620_0016029_814_2121 425
17 3300046515 Ga0495620_0073887 Ga0495620_0073887_19_1326 425
18 3300046518 Ga0495631_0003045 Ga0495631_0003045_3660_4967 425
19 3300046522 Ga0495643_0006221 Ga0495643_0006221_1557_2864 425
20 3300046526 Ga0495666_0008864 Ga0495666_0008864_1160_2467 425
21 3300046557 Ga0495622_0001516 Ga0495622_0001516_7549_8856 425
22 3300046616 Ga0495668_0034018 Ga0495668_0034018_74_1381 425
23 3300046642 Ga0495634_0070017 Ga0495634_0070017_740_2047 425
24 3300046660 Ga0495625_0055197 Ga0495625_0055197_1453_2760 425
25 3300046665 Ga0495661_0058048 Ga0495661_0058048_41_1348 425
26 3300046675 Ga0495657_0014050 Ga0495657_0014050_3859_5166 425
27 3300046794 Ga0495589_0020675 Ga0495589_0020675_120_1427 425
28 3300046794 Ga0495589_0027669 Ga0495589_0027669_1169_2476 425
29 3300046810 Ga0495660_0043770 Ga0495660_0043770_1086_2393 425
30 3300047321 Ga0495676_0030050 Ga0495676_0030050_2135_3442 425
31 3300047321 Ga0495676_0075237 Ga0495676_0075237_523_1830 425
32 3300047443 Ga0495687_022238 Ga0495687_022238_411_1718 425
33 3300048089 Ga0495614_0058203 Ga0495614_0058203_92_1399 425
34 3300048091 Ga0495626_0042226 Ga0495626_0042226_807_2114 425
35 3300049571 Ga0501034_0014990 Ga0501034_0014990_154_1461 425
36 3300049579 Ga0501043_0042789 Ga0501043_0042789_2206_3507 425
37 3300049581 Ga0501047_0031184 Ga0501047_0031184_75_1376 425
38 3300049581 Ga0501047_0041310 Ga0501047_0041310_75_1376 425
39 3300049822 Ga0501035_0050839 Ga0501035_0050839_2337_3638 425
40 3300049823 Ga0501044_0241218 Ga0501044_0241218_425_1726 425
41 3300005539 Ga0068853_100010625 Ga0068853_1000106251 430
42 3300025924 Ga0207694_10020906 Ga0207694_100209064 430
43 3300028786 Ga0307517_10006976 Ga0307517_100069764 431
44 3300028794 Ga0307515_10000995 Ga0307515_1000099541 431
45 3300031616 Ga0307508_10057487 Ga0307508_100574872 431
46 3300033179 Ga0307507_10018632 Ga0307507_100186323 431
47 3300046459 Ga0495629_0025061 Ga0495629_0025061_2796_4217 431
48 3300046660 Ga0495625_0078925 Ga0495625_0078925_337_1758 431
49 3300046674 Ga0495588_0006659 Ga0495588_0006659_2813_4234 431
50 3300046692 Ga0495671_0004298 Ga0495671_0004298_7116_8537 431
51 3300047470 Ga0495681_0004315 Ga0495681_0004315_5848_7269 431
52 3300044684 Ga0466966_0019881 Ga0466966_0019881_2390_3805 433
53 3300044719 Ga0466971_0002894 Ga0466971_0002894_4534_5949 433
54 3300045836 Ga0466958_0023455 Ga0466958_0023455_1182_2597 433
55 3300061719 Ga0466962_0001016 Ga0466962_0001016_7834_9249 433
56 3300031838 Ga0307518_10061542 Ga0307518_100615422 434
57 3300033180 Ga0307510_10002773 Ga0307510_1000277315 434
58 3300009551 Ga0105238_10021383 Ga0105238_100213832 435
59 3300044684 Ga0466966_0061564 Ga0466966_0061564_117_1505 442
60 3300044693 Ga0466961_0046603 Ga0466961_0046603_533_1921 442
61 3300061719 Ga0466962_0029857 Ga0466962_0029857_176_1564 442
62 3300031507 Ga0307509_10019414 Ga0307509_100194142 443
63 3300046462 Ga0495651_0001529 Ga0495651_0001529_2683_4071 443
64 3300031852 Ga0307410_10070387 Ga0307410_100703872 447
65 iso_pu_bacteria 2884693830 2884695354 447
66 iso_pu_bacteria 2895442618 2895445938 447
67 3300048909 Ga0496106_0144614 Ga0496106_0144614_160_1566 448
68 iso_pu_bacteria 2643221601 2644016211 448
69 iso_pu_bacteria 2643221631 2644179695 448
70 iso_pu_bacteria 2675903060 2676490461 448
71 3300022467 Ga0224712_10026936 Ga0224712_100269361 449
72 3300044735 Ga0466968_0083947 Ga0466968_0083947_12_1385 449
73 3300046462 Ga0495651_0025531 Ga0495651_0025531_1670_3106 449
74 3300046809 Ga0495600_0100505 Ga0495600_0100505_107_1543 449
75 3300030521 Ga0307511_10000145 Ga0307511_1000014535 450
76 3300037466 Ga0395898_0010345 Ga0395898_0010345_3254_4690 450
77 3300042157 Ga0439458_0017807 Ga0439458_0017807_19_1461 450
78 3300044656 Ga0466969_0081605 Ga0466969_0081605_67_1455 450
79 3300046454 Ga0495592_0020921 Ga0495592_0020921_577_1959 450
80 3300046462 Ga0495651_0006989 Ga0495651_0006989_7044_8426 450
81 3300046463 Ga0495653_0039067 Ga0495653_0039067_787_2169 450
82 3300046476 Ga0495662_0005457 Ga0495662_0005457_2007_3389 450
83 3300046477 Ga0495664_0012536 Ga0495664_0012536_1676_3058 450
84 3300046511 Ga0495608_0009045 Ga0495608_0009045_4033_5415 450
85 3300046514 Ga0495618_0036620 Ga0495618_0036620_224_1606 450
86 3300046526 Ga0495666_0002672 Ga0495666_0002672_1758_3140 450
87 3300046529 Ga0495652_0092302 Ga0495652_0092302_787_2169 450
88 3300046531 Ga0495665_0013746 Ga0495665_0013746_1306_2688 450
89 3300046533 Ga0495640_0038827 Ga0495640_0038827_1520_2902 450
90 3300046535 Ga0495586_0003310 Ga0495586_0003310_2949_4331 450
91 3300046543 Ga0495645_0019112 Ga0495645_0019112_1497_2879 450
92 3300046559 Ga0495667_0005230 Ga0495667_0005230_7044_8426 450
93 3300046675 Ga0495657_0024601 Ga0495657_0024601_1431_2813 450
94 3300046679 Ga0495623_0037157 Ga0495623_0037157_93_1475 450
95 3300046680 Ga0495646_0007998 Ga0495646_0007998_93_1475 450
96 3300046689 Ga0495613_0003382 Ga0495613_0003382_7044_8426 450
97 3300047315 Ga0495581_0007787 Ga0495581_0007787_3256_4638 450
98 3300047317 Ga0495604_0003816 Ga0495604_0003816_6632_8014 450
99 3300047319 Ga0495674_0086850 Ga0495674_0086850_787_2169 450
100 3300047673 Ga0495593_0072412 Ga0495593_0072412_183_1565 450
101 3300048088 Ga0495602_0053702 Ga0495602_0053702_1864_3246 450
102 3300053085 Ga0495619_0038534 Ga0495619_0038534_1685_3067 450
103 3300053136 Ga0500559_0007924 Ga0500559_0007924_3192_4586 450
104 3300003354 JGI25160J50197_1008633 JGI25160J50197_10086333 453
105 3300025302 Ga0207426_1000716 Ga0207426_100071618 453
106 iso_pu_bacteria 2675903060 2676490365 454
107 3300003316 rootH1_10000057 rootH1_100000576 455
108 3300003322 rootL2_10027534 rootL2_100275344 455
109 3300044656 Ga0466969_0001384 Ga0466969_0001384_10108_11532 455
110 3300044656 Ga0466969_0012277 Ga0466969_0012277_2556_3959 455
111 3300044684 Ga0466966_0001245 Ga0466966_0001245_7760_9184 455
112 3300044693 Ga0466961_0018409 Ga0466961_0018409_1653_3056 455
113 3300044693 Ga0466961_0025944 Ga0466961_0025944_517_1941 455
114 3300061719 Ga0466962_0059783 Ga0466962_0059783_291_1694 455
115 iso_pu_bacteria 2995463766 2995465917 455
116 iso_pu_bacteria 2995463766 2995466771 455
117 iso_pu_bacteria 8057568493 8057571210 455
118 3300044684 Ga0466966_0122138 Ga0466966_0122138_131_1537 456
119 3300046809 Ga0495600_0124596 Ga0495600_0124596_176_1627 456
120 3300049568 Ga0501031_0024918 Ga0501031_0024918_225_1712 456
121 3300049572 Ga0501036_0008789 Ga0501036_0008789_41_1528 456
122 3300049579 Ga0501043_0002864 Ga0501043_0002864_5526_7013 456
123 3300049580 Ga0501046_0139091 Ga0501046_0139091_53_1540 456
124 3300049823 Ga0501044_0015917 Ga0501044_0015917_430_1917 456
125 3300049824 Ga0501045_0133878 Ga0501045_0133878_64_1551 456
126 iso_pu_bacteria 2808606448 2809233969 456
127 iso_pu_bacteria 2862382967 2862386851 456
128 iso_pu_bacteria 2884693830 2884704016 456
129 iso_pu_bacteria 2895442618 2895448628 456
130 iso_pu_bacteria 2990059506 2990060136 456
131 iso_pu_bacteria 8008558824 8008560680 456
132 iso_pu_bacteria 2995463766 2995469471 457
133 iso_pu_bacteria 2643221647 2644265116 458
134 iso_pu_bacteria 2784746768 2785366215 458
135 iso_pu_bacteria 2877676314 2877684298 458
136 iso_pu_bacteria 2954691527 2954700477 458
137 iso_pu_bacteria 2954701450 2954701751 458
138 iso_pu_bacteria 2954711539 2954719151 458
139 iso_pu_bacteria 2954721474 2954729122 458
140 iso_pu_bacteria 2954740390 2954748022 458
141 iso_pu_bacteria 2954749733 2954751567 458
142 iso_pu_bacteria 2954759201 2954767147 458
143 3300003316 rootH1_10004151 rootH1_1000415119 459
144 3300013105 Ga0157369_10036770 Ga0157369_100367702 459
145 3300021388 Ga0213875_10026834 Ga0213875_100268342 459
146 3300037853 Ga0436364_0850801 Ga0436364_0850801_466_1887 459
147 3300049574 Ga0501038_0113129 Ga0501038_0113129_801_2222 459
148 3300049581 Ga0501047_0168909 Ga0501047_0168909_117_1538 459
149 3300006038 Ga0075365_10049431 Ga0075365_100494312 460
150 3300030522 Ga0307512_10028452 Ga0307512_100284522 460
151 3300041494 Ga0451837_0845674 Ga0451837_0845674_460_1890 460
152 3300041512 Ga0451853_2674783 Ga0451853_2674783_240_1667 460
153 3300044765 Ga0466970_0002519 Ga0466970_0002519_7357_8763 460
154 3300046660 Ga0495625_0032028 Ga0495625_0032028_90_1517 460
155 iso_pu_bacteria 2582581314 2585316430 460
156 iso_pu_bacteria 2643221678 2644441796 460
157 iso_pu_bacteria 2808606359 2808846815 460
158 iso_pu_bacteria 2862574272 2862574518 460
159 iso_pu_bacteria 2919468124 2919473838 460
160 iso_pu_bacteria 8054160619 8054163781 460
161 3300044656 Ga0466969_0002786 Ga0466969_0002786_6099_7520 461
162 3300044684 Ga0466966_0004371 Ga0466966_0004371_3333_4754 461
163 3300044693 Ga0466961_0052682 Ga0466961_0052682_659_2080 461
164 3300045049 Ga0466959_0021740 Ga0466959_0021740_225_1646 461
165 3300045976 Ga0466967_0256715 Ga0466967_0256715_171_1583 461
166 iso_pu_bacteria 8056829672 8056834974 461
167 3300005455 Ga0070663_100063486 Ga0070663_1000634861 462
168 3300005548 Ga0070665_100028855 Ga0070665_1000288555 462
169 3300005563 Ga0068855_100001720 Ga0068855_10000172030 462
170 3300005616 Ga0068852_100163852 Ga0068852_1001638522 462
171 3300014497 Ga0182008_10001515 Ga0182008_1000151515 462
172 3300015262 Ga0182007_10000291 Ga0182007_1000029119 462
173 3300015265 Ga0182005_1008033 Ga0182005_10080333 462
174 3300025904 Ga0207647_10054165 Ga0207647_100541651 462
175 3300025911 Ga0207654_10025355 Ga0207654_100253553 462
176 3300025913 Ga0207695_10003000 Ga0207695_1000300017 462
177 3300025914 Ga0207671_10000631 Ga0207671_1000063127 462
178 3300025924 Ga0207694_10044514 Ga0207694_100445142 462
179 3300025949 Ga0207667_10105405 Ga0207667_101054052 462
180 3300026067 Ga0207678_10023767 Ga0207678_100237672 462
181 3300044693 Ga0466961_0044707 Ga0466961_0044707_1147_2583 462
182 3300003578 Ga0006562J51391_1066242 Ga0006562J51391_10662423 464
183 3300005937 Ga0081455_10036976 Ga0081455_100369763 464
184 3300011119 Ga0105246_10186831 Ga0105246_101868312 464
185 3300025302 Ga0207426_1004760 Ga0207426_10047602 464
186 3300030521 Ga0307511_10002051 Ga0307511_100020517 464
187 3300030521 Ga0307511_10012524 Ga0307511_100125245 464
188 3300031507 Ga0307509_10004141 Ga0307509_1000414118 464
189 3300031649 Ga0307514_10057441 Ga0307514_100574413 464
190 3300031730 Ga0307516_10009394 Ga0307516_100093948 464
191 3300033180 Ga0307510_10010384 Ga0307510_100103847 464
192 3300037418 Ga0395900_0104243 Ga0395900_0104243_744_2186 464
193 3300037466 Ga0395898_0039959 Ga0395898_0039959_2072_3514 464
194 3300041512 Ga0451853_2707819 Ga0451853_2707819_1091_2533 464
195 3300045836 Ga0466958_0061612 Ga0466958_0061612_429_1871 464
196 3300045976 Ga0466967_0072154 Ga0466967_0072154_481_1923 464
197 3300046452 Ga0495617_014775 Ga0495617_014775_992_2434 464
198 3300046692 Ga0495671_0019594 Ga0495671_0019594_37_1479 464
199 3300046809 Ga0495600_0017952 Ga0495600_0017952_2595_4202 464
200 3300047443 Ga0495687_001141 Ga0495687_001141_22401_23843 464
201 3300047443 Ga0495687_040516 Ga0495687_040516_339_1781 464
202 3300049570 Ga0501033_0005759 Ga0501033_0005759_6967_8409 464
203 3300049571 Ga0501034_0015003 Ga0501034_0015003_16_1458 464
204 3300049579 Ga0501043_0020141 Ga0501043_0020141_1850_3292 464
205 3300049581 Ga0501047_0067946 Ga0501047_0067946_1155_2597 464
206 3300049823 Ga0501044_0006941 Ga0501044_0006941_5926_7368 464
207 3300049823 Ga0501044_0031794 Ga0501044_0031794_2719_4161 464
208 3300049823 Ga0501044_0062871 Ga0501044_0062871_704_2146 464
209 3300053078 Ga0495612_0007790 Ga0495612_0007790_1659_3266 464
210 3300046516 Ga0495628_0005371 Ga0495628_0005371_8397_10004 465
211 3300009093 Ga0105240_10011261 Ga0105240_100112611 466
212 3300009174 Ga0105241_10005415 Ga0105241_100054153 466
213 3300009545 Ga0105237_10097548 Ga0105237_100975481 466
214 3300009551 Ga0105238_10029764 Ga0105238_100297642 466
215 3300013296 Ga0157374_10068509 Ga0157374_100685093 466
216 3300044765 Ga0466970_0017326 Ga0466970_0017326_2085_3710 466
217 3300046477 Ga0495664_0033008 Ga0495664_0033008_556_2163 466
218 3300046529 Ga0495652_0024786 Ga0495652_0024786_3495_5102 466
219 3300046543 Ga0495645_0114413 Ga0495645_0114413_60_1667 466
220 3300046663 Ga0495635_0006515 Ga0495635_0006515_1083_2690 466
221 3300046679 Ga0495623_0060254 Ga0495623_0060254_388_1995 466
222 3300046680 Ga0495646_0009263 Ga0495646_0009263_2985_4592 466
223 3300053077 Ga0495601_0003849 Ga0495601_0003849_6676_8283 466
224 3300044693 Ga0466961_0104992 Ga0466961_0104992_222_1745 468
225 3300003203 JGI25406J46586_10003468 JGI25406J46586_100034683 469
226 3300005985 Ga0081539_10000257 Ga0081539_1000025769 469

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF19307

SrpI-like

Type 2A encapsulin shell protein SrpI-like

260

513

0.99

PF00027

cNMP_binding

Cyclic nucleotide-binding domain

159

249

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6cjt-assembly1.cif.gz_A structure of the sthk cyclic nucleotide-gated potassium channel in complex with cgmp 0.8636 99 209
8bx7-assembly1.cif.gz_A structure of the rod cng channel bound to calmodulin 0.8562 97 212
7rhs-assembly1.cif.gz_D cryo-em structure of apo-state of human cnga3/cngb3 channel 0.8553 98 211
7rsh-assembly1.cif.gz_A sthk y26f closed state 0.8511 99 214
7rhj-assembly1.cif.gz_B cryo-em structure of human rod cnga1/b1 channel in l-cis-diltiazem-blocked open state 0.8407 97 214
ID Description Score Start End Superfamily
af_Q9U969_167_308_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8355 105 211 2.60.120.10
af_Q4DAR7_346_497_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8345 102 216 2.60.120.10
af_Q0DNE3_423_541_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8337 100 201 2.60.120.10
5j3uA01 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.832 102 198 2.60.120.10
af_Q8I719_160_276_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8312 100 200 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A7S1MWE9-F1-model_v4 Type 2A encapsulin shell protein SrpI-like domain-containing protein 0.9786 281 408
AF-A0A7S1MWE9-F1-model_v4 Type 2A encapsulin shell protein SrpI-like domain-containing protein 0.9636 281 408
AF-A0A1I2KA63-F1-model_v4 Cyclic nucleotide-binding domain-containing protein 0.8746 82 183
AF-A0A5S9I641-F1-model_v4 Cyclic nucleotide-binding protein 0.86 250 467
AF-A0A5S9I641-F1-model_v4 Cyclic nucleotide-binding protein 0.8522 250 467

Feature Viewer

pLDDT pTM Quality
68.38 0.51 Medium
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Predicted Structure (AlphaFold2)

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