F339200

General Info

Members Datasets Scaffolds Average Seq Length
226 170 215 750

Family's Representative Sequence

Representative Sequence 3300046539|Ga0495621_0000271|Ga0495621_0000271_8461_10854
Length 781
Sequence LTCINATWHSRHDHAGNHWEKTVMSNTRKLWLGLAALLIASFAVLLWAGGEIFRAAPPVPERVVSESGQVVYTRTDIEKGRQVWQSMGGMQLGSIWGHGGYVAPDWSADWLHREAVGLLDLWARADGGMATYAQLPAEQQAALRGRLKEVMRTNSYDAATGTITLPNDRVVALSNVAAHYESLFGNDPATASLREAYAMKNDTVPDATHRRALTAFFWWTAWAAGTERPREPGDALVPNQSGVVDKQVTYTNNWPSEPLIDNTPPAPLWLWSAFSVLFLLAGIGLLGWHHARTHERGEHPHTIPASDPMAALRITPSMRATAKYFWVVLALFLVQILLGAMTAHYQVEGQQAYGFMLSDVLPYSITRTWHTQLAVLWIAVAWLGTGLYIAPALSGHEPKFQRFGVNFLFVCLLLIVVGSFAGQWLAVMQKLGLDLNFWWGHQGWEYADMGRFWQWFLFIGLLPKTDTKSIVALLFLSTVCIGLFFGAALMWGEHTHISEVEYWRWWLVHLWVEGFFEVFATAVMALIFTRLGLVEAKTATSAVLFATIVFMTGGVLGTLHHLYFVGTPTAVVALGASFSALEVVPLAYIGFEAYHTWKLGQSTPWMARYRWPILFFIAVSFWNLVGAGLFGFLINPPLSLYYMQGLNLTPLHGHTALFGVYGMLGIALVLFCMRGLRGQMVWDTRPLKVAFWAFNIGLAMMALLTLLPLGTMQLLATIEHGYAYARSAEFMQRPIVDMLVWMRVPGDTIFSVGALALCWFVFRLWVAPRTAPAEGVGEAEG

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
3 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
4 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
5 2643221577 Rhodanobacter sp. Root627 Isolate Unclassified
6 2643221586 Lysobacter sp. Root667 Isolate Unclassified
7 2643221685 Rhodanobacter sp. Root480 Isolate Unclassified
8 2895395659 Rhodanobacter sp. T12-5 Isolate Unclassified
9 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
10 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
11 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
12 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
13 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
14 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
15 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
16 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
17 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
18 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
19 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
20 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
21 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
22 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
23 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
24 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
25 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
26 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
27 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
28 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
29 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
30 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
31 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
32 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
33 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
34 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
35 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
36 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
37 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
38 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
39 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
66 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
68 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
96 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
98 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
99 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
100 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
101 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
102 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
103 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
104 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
105 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
106 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
107 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
108 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
109 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
110 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
111 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
112 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
113 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
114 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
115 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
116 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
117 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
118 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
119 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
120 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
121 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
122 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
123 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
124 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
125 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
128 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
129 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
130 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
131 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
134 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
135 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
136 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
137 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
140 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
141 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
148 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
149 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
150 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
151 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
152 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
153 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
154 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
155 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
156 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
157 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
161 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
169 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
170 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.13
Metatranscriptomes 0
Isolates 4.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.29
Nodule 0
Rhizoplane 2.65
Rhizosphere 83.19
Stem 0
Stem Tuber 0
Unclassified 4.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1279702 2162886007 Bacteria 4778
2 JGI25153J46596_10001693 3300003215 Bacteria 13079
3 rootH2_10041440 3300003320 Bacteria 6183
4 Ga0055536_1000568 3300003781 Bacteria 25223
5 Ga0055530_10002071 3300003791 Bacteria 13463
6 Ga0065704_10000637 3300005289 Bacteria 14704
7 Ga0065704_10004750 3300005289 Bacteria 4921
8 Ga0065715_10089826 3300005293 Bacteria 8401
9 Ga0070676_10002938 3300005328 Bacteria 8796
10 Ga0070677_10003845 3300005333 Bacteria 4864
11 Ga0068869_100011222 3300005334 Bacteria 5869
12 Ga0068869_100041100 3300005334 Bacteria 3310
13 Ga0070660_100022431 3300005339 Bacteria 4668
14 Ga0070689_100004364 3300005340 Bacteria 9548
15 Ga0070687_100014418 3300005343 Bacteria 3549
16 Ga0070661_100004130 3300005344 Bacteria 10012
17 Ga0070668_100039098 3300005347 Bacteria 3629
18 Ga0070669_100016197 3300005353 Bacteria 5318
19 Ga0070675_100001062 3300005354 Bacteria 19801
20 Ga0070675_100005112 3300005354 Bacteria 10006
21 Ga0070675_100055037 3300005354 Bacteria 3274
22 Ga0070674_100044721 3300005356 Bacteria 3021
23 Ga0070673_100010498 3300005364 Bacteria 6272
24 Ga0070688_100006781 3300005365 Bacteria 6141
25 Ga0070667_100030593 3300005367 Bacteria 4490
26 Ga0070667_100066992 3300005367 Bacteria 3052
27 Ga0070701_10014751 3300005438 Bacteria 3590
28 Ga0070678_100038320 3300005456 Bacteria 3373
29 Ga0070662_100012419 3300005457 Bacteria 5649
30 Ga0068867_100046290 3300005459 Bacteria 3195
31 Ga0070672_100002084 3300005543 Bacteria 12600
32 Ga0070686_100015199 3300005544 Bacteria 4452
33 Ga0070693_100001324 3300005547 Bacteria 11151
34 Ga0070665_100002087 3300005548 Bacteria 22404
35 Ga0070665_100052207 3300005548 Bacteria 4102
36 Ga0068861_100000583 3300005719 Bacteria 21637
37 Ga0068861_100005096 3300005719 Bacteria 8859
38 Ga0068861_100008983 3300005719 Bacteria 6887
39 Ga0068861_100009780 3300005719 Bacteria 6630
40 Ga0068861_100017364 3300005719 Bacteria 5107
41 Ga0068861_100037580 3300005719 Bacteria 3600
42 Ga0068863_100003493 3300005841 Bacteria 15509
43 Ga0068863_100006768 3300005841 Bacteria 11239
44 Ga0068862_100001251 3300005844 Bacteria 23877
45 Ga0068862_100002071 3300005844 Bacteria 18100
46 Ga0081455_10001789 3300005937 Bacteria 25970
47 Ga0081455_10005324 3300005937 Bacteria 14131
48 Ga0075364_10048164 3300006051 Bacteria 2777
49 Ga0075366_10008312 3300006195 Bacteria 5765
50 Ga0097621_100041398 3300006237 Bacteria 3708
51 Ga0068871_100051716 3300006358 Bacteria 3327
52 Ga0075428_100003988 3300006844 Bacteria 16194
53 Ga0075428_100038625 3300006844 Bacteria 5254
54 Ga0075433_10006654 3300006852 Bacteria 9152
55 Ga0075434_100002664 3300006871 Bacteria 15768
56 Ga0075429_100010833 3300006880 Bacteria 7884
57 Ga0111539_10014911 3300009094 Bacteria 9688
58 Ga0111539_10015438 3300009094 Bacteria 9501
59 Ga0114129_10034658 3300009147 Bacteria 7130
60 Ga0105242_10014263 3300009176 Bacteria 6155
61 Ga0105248_10003969 3300009177 Bacteria 16355
62 Ga0105238_10008767 3300009551 Bacteria 10117
63 Ga0105249_10033299 3300009553 Bacteria 4665
64 Ga0105030_100040 3300009987 Bacteria 9242
65 Ga0157374_10112679 3300013296 Bacteria 2618
66 Ga0157372_10014108 3300013307 Bacteria 8533
67 Ga0157375_10001308 3300013308 Bacteria 21462
68 Ga0163163_10004087 3300014325 Bacteria 12445
69 Ga0157380_10002387 3300014326 Bacteria 12628
70 Ga0157380_10012239 3300014326 Bacteria 6216
71 Ga0207425_1009805 3300025245 Bacteria 2363
72 Ga0209676_1000196 3300025292 Bacteria 135726
73 Ga0209676_1001918 3300025292 Bacteria 16835
74 Ga0209676_1003241 3300025292 Bacteria 10260
75 Ga0209758_1000126 3300025297 Bacteria 189761
76 Ga0209050_1000829 3300025298 Bacteria 42838
77 Ga0209256_1000178 3300025299 Bacteria 125165
78 Ga0209256_1001556 3300025299 Bacteria 22754
79 Ga0209256_1002926 3300025299 Bacteria 12829
80 Ga0209257_1000013 3300025304 Bacteria 1047305
81 Ga0209257_1000065 3300025304 Bacteria 353604
82 Ga0209257_1000498 3300025304 Bacteria 70112
83 Ga0209257_1005061 3300025304 Bacteria 9572
84 Ga0207682_10002317 3300025893 Bacteria 8583
85 Ga0207682_10014243 3300025893 Bacteria 3098
86 Ga0207645_10005881 3300025907 Bacteria 8836
87 Ga0207643_10015455 3300025908 Bacteria 4155
88 Ga0207663_10043473 3300025916 Bacteria 2751
89 Ga0207649_10010889 3300025920 Bacteria 5001
90 Ga0207681_10003447 3300025923 Bacteria 9863
91 Ga0207659_10009303 3300025926 Bacteria 6136
92 Ga0207644_10066032 3300025931 Bacteria 2633
93 Ga0207706_10033315 3300025933 Bacteria 4587
94 Ga0207670_10012999 3300025936 Bacteria 4894
95 Ga0207691_10006611 3300025940 Bacteria 11193
96 Ga0207691_10010610 3300025940 Bacteria 8838
97 Ga0207711_10027794 3300025941 Bacteria 4754
98 Ga0207689_10010654 3300025942 Bacteria 7913
99 Ga0207689_10013259 3300025942 Bacteria 7031
100 Ga0207689_10013653 3300025942 Bacteria 6925
101 Ga0207679_10027738 3300025945 Bacteria 3920
102 Ga0207651_10020119 3300025960 Bacteria 4020
103 Ga0207668_10006634 3300025972 Bacteria 6845
104 Ga0207708_10027361 3300026075 Bacteria 4316
105 Ga0207641_10010652 3300026088 Bacteria 7543
106 Ga0207641_10037275 3300026088 Bacteria 4059
107 Ga0207648_10020280 3300026089 Bacteria 5989
108 Ga0207676_10003279 3300026095 Bacteria 11503
109 Ga0207675_100000276 3300026118 Bacteria 49005
110 Ga0207675_100004058 3300026118 Bacteria 14181
111 Ga0207675_100010023 3300026118 Bacteria 8880
112 Ga0207675_100020439 3300026118 Bacteria 6171
113 Ga0207675_100061943 3300026118 Bacteria 3493
114 Ga0207683_10011482 3300026121 Bacteria 7559
115 Ga0209998_10002340 3300027717 Bacteria 4376
116 Ga0209974_10001953 3300027876 Bacteria 7527
117 Ga0207428_10023968 3300027907 Bacteria 5125
118 Ga0268265_10001654 3300028380 Bacteria 18246
119 Ga0268265_10062813 3300028380 Bacteria 2855
120 Ga0307515_10000089 3300028794 Bacteria 215736
121 Ga0307515_10001273 3300028794 Bacteria 57314
122 Ga0307512_10054295 3300030522 Bacteria 3175
123 Ga0307408_100004210 3300031548 Bacteria 9798
124 Ga0307408_100016367 3300031548 Bacteria 4949
125 Ga0307516_10039593 3300031730 Bacteria 4697
126 Ga0307405_10017186 3300031731 Bacteria 3963
127 Ga0307413_10020645 3300031824 Bacteria 3509
128 Ga0307410_10015145 3300031852 Bacteria 4565
129 Ga0307410_10027388 3300031852 Bacteria 3602
130 Ga0307406_10017194 3300031901 Bacteria 4210
131 Ga0307412_10012237 3300031911 Bacteria 4993
132 Ga0307409_100000287 3300031995 Bacteria 20454
133 Ga0307414_10002119 3300032004 Bacteria 10347
134 Ga0307414_10002843 3300032004 Bacteria 9133
135 Ga0307414_10004712 3300032004 Bacteria 7443
136 Ga0307414_10008431 3300032004 Bacteria 5845
137 Ga0307414_10011087 3300032004 Bacteria 5272
138 Ga0307414_10015632 3300032004 Bacteria 4586
139 Ga0307414_10024808 3300032004 Bacteria 3829
140 Ga0307411_10005845 3300032005 Bacteria 6100
141 Ga0307411_10011977 3300032005 Bacteria 4708
142 Ga0307411_10040295 3300032005 Bacteria 2962
143 Ga0307415_100017576 3300032126 Bacteria 4292
144 Ga0395901_0001304 3300038443 Bacteria 26281
145 Ga0439436_0003484 3300041404 Bacteria 4783
146 Ga0439465_0001784 3300041413 Bacteria 7045
147 Ga0451807_2151993 3300041486 Bacteria 3473
148 Ga0451837_1010921 3300041494 Bacteria 3378
149 Ga0439433_0000792 3300041999 Bacteria 6252
150 Ga0439432_002868 3300042006 Bacteria 6426
151 Ga0439449_0013208 3300042007 Bacteria 3106
152 Ga0439452_007267 3300042010 Bacteria 3403
153 Ga0450920_002075 3300042122 Bacteria 3383
154 Ga0450906_006926 3300042145 Bacteria 2262
155 Ga0439446_0005672 3300042156 Bacteria 3219
156 Ga0439434_0003419 3300042435 Bacteria 4638
157 Ga0439435_0000148 3300042436 Bacteria 9467
158 Ga0439444_0000013 3300042437 Bacteria 14340
159 Ga0451577_0013015 3300042876 Bacteria 7804
160 Ga0451577_0015721 3300042876 Bacteria 7028
161 Ga0451577_0040588 3300042876 Bacteria 4179
162 Ga0451577_0060679 3300042876 Bacteria 3371
163 Ga0451576_0080999 3300045051 Bacteria 3377
164 Ga0495638_0001970 3300046460 Bacteria 17599
165 Ga0495632_0007998 3300046519 Bacteria 6563
166 Ga0495663_0003196 3300046525 Bacteria 4775
167 Ga0495598_0013132 3300046537 Bacteria 2047
168 Ga0495621_0000271 3300046539 Bacteria 12420
169 Ga0495625_0040924 3300046660 Bacteria 3376
170 Ga0495671_0011912 3300046692 Bacteria 4765
171 Ga0495687_010611 3300047443 Bacteria 5039
172 Ga0496102_0087305 3300048905 Bacteria 2882
173 Ga0496106_0023797 3300048909 Bacteria 4553
174 Ga0496108_0065943 3300048911 Bacteria 3052
175 Ga0496109_0099917 3300048912 Bacteria 2691
176 Ga0496114_0029961 3300048917 Bacteria 4475
177 Ga0496124_0080601 3300048927 Bacteria 2678
178 Ga0501031_0000353 3300049568 Bacteria 26725
179 Ga0501033_0005310 3300049570 Bacteria 10212
180 Ga0501034_0000275 3300049571 Bacteria 92805
181 Ga0501034_0000544 3300049571 Bacteria 59969
182 Ga0501034_0000882 3300049571 Bacteria 44066
183 Ga0501034_0052371 3300049571 Bacteria 4112
184 Ga0501037_0007372 3300049573 Bacteria 8048
185 Ga0501039_0012146 3300049575 Bacteria 6566
186 Ga0501047_0048448 3300049581 Bacteria 4103
187 Ga0501067_0012236 3300049583 Bacteria 4755
188 Ga0501067_0025912 3300049583 Bacteria 3249
189 Ga0501068_0002877 3300049584 Bacteria 9164
190 Ga0501070_0023944 3300049586 Bacteria 5118
191 Ga0501071_0043021 3300049587 Bacteria 3237
192 Ga0501071_0050274 3300049587 Bacteria 3003
193 Ga0501073_0001449 3300049589 Bacteria 17548
194 Ga0501073_0001686 3300049589 Bacteria 16379
195 Ga0501074_0000768 3300049590 Bacteria 20209
196 Ga0501075_0002522 3300049591 Bacteria 12209
197 Ga0501076_0082665 3300049592 Bacteria 2578
198 Ga0501077_0003186 3300049593 Bacteria 9886
199 Ga0501079_0000385 3300049741 Bacteria 28427
200 Ga0501080_0000663 3300049742 Bacteria 27344
201 Ga0501035_0026198 3300049822 Bacteria 5336
202 Ga0501044_0000240 3300049823 Bacteria 69453
203 nmdc:mga00v17_861_c1 3300050491 Bacteria 16388
204 nmdc:mga0yw44_9781_c1 3300050492 Bacteria 4871
205 nmdc:mga05p37_17943_c1 3300050507 Bacteria 8544
206 nmdc:mga09592_40168_c1 3300050508 Bacteria 3930
207 nmdc:mga0qj67_6759_c1 3300050509 Bacteria 8433
208 nmdc:mga06r32_11142_c1 3300050510 Bacteria 8097
209 nmdc:mga08y16_45285_c1 3300050511 Bacteria 4610
210 nmdc:mga0n895_80436_c1 3300050512 Bacteria 3247
211 Ga0500622_0005619 3300053156 Bacteria 7470
212 Ga0501084_0001297 3300054114 Bacteria 19660
213 Ga0501082_0000065 3300060353 Bacteria 76028
214 Ga0501082_0001756 3300060353 Bacteria 19083
215 Ga0501082_0028136 3300060353 Bacteria 4844

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046537 Ga0495598_0013132 Ga0495598_0013132_20_1963 630
2 3300050492 nmdc:mga0yw44_9781_c1 nmdc:mga0yw44_9781_c1_1841_4096 682
3 3300046519 Ga0495632_0007998 Ga0495632_0007998_3990_6248 689
4 3300047443 Ga0495687_010611 Ga0495687_010611_2529_4811 697
5 3300003215 JGI25153J46596_10001693 JGI25153J46596_100016939 699
6 3300005841 Ga0068863_100006768 Ga0068863_10000676812 699
7 3300025297 Ga0209758_1000126 Ga0209758_100012637 699
8 3300026088 Ga0207641_10010652 Ga0207641_100106526 699
9 3300030522 Ga0307512_10054295 Ga0307512_100542952 702
10 3300042876 Ga0451577_0060679 Ga0451577_0060679_764_3046 702
11 3300028794 Ga0307515_10000089 Ga0307515_10000089111 703
12 3300028794 Ga0307515_10001273 Ga0307515_1000127326 703
13 3300006195 Ga0075366_10008312 Ga0075366_100083123 706
14 3300048912 Ga0496109_0099917 Ga0496109_0099917_14_2197 707
15 3300014326 Ga0157380_10002387 Ga0157380_100023874 708
16 3300032126 Ga0307415_100017576 Ga0307415_1000175762 708
17 3300042876 Ga0451577_0040588 Ga0451577_0040588_1263_3560 708
18 3300042876 Ga0451577_0013015 Ga0451577_0013015_5437_7725 712
19 3300042145 Ga0450906_006926 Ga0450906_006926_33_2207 713
20 3300006358 Ga0068871_100051716 Ga0068871_1000517162 718
21 3300060353 Ga0501082_0000065 Ga0501082_0000065_9143_11497 719
22 3300003320 rootH2_10041440 rootH2_100414402 729
23 3300032005 Ga0307411_10040295 Ga0307411_100402952 733
24 3300013307 Ga0157372_10014108 Ga0157372_100141084 734
25 3300049571 Ga0501034_0052371 Ga0501034_0052371_273_2525 734
26 3300049581 Ga0501047_0048448 Ga0501047_0048448_1686_3938 734
27 3300006844 Ga0075428_100003988 Ga0075428_1000039887 737
28 3300006880 Ga0075429_100010833 Ga0075429_1000108335 737
29 3300009147 Ga0114129_10034658 Ga0114129_100346584 737
30 3300041486 Ga0451807_2151993 Ga0451807_2151993_1219_3435 737
31 3300046692 Ga0495671_0011912 Ga0495671_0011912_1279_3558 737
32 3300050508 nmdc:mga09592_40168_c1 nmdc:mga09592_40168_c1_1630_3906 737
33 3300050509 nmdc:mga0qj67_6759_c1 nmdc:mga0qj67_6759_c1_3559_5835 737
34 3300050510 nmdc:mga06r32_11142_c1 nmdc:mga06r32_11142_c1_5083_7359 737
35 3300031852 Ga0307410_10027388 Ga0307410_100273882 738
36 3300031995 Ga0307409_100000287 Ga0307409_10000028715 738
37 3300005340 Ga0070689_100004364 Ga0070689_1000043644 739
38 3300005719 Ga0068861_100009780 Ga0068861_1000097806 739
39 3300026118 Ga0207675_100004058 Ga0207675_10000405815 739
40 3300028380 Ga0268265_10062813 Ga0268265_100628132 739
41 3300042122 Ga0450920_002075 Ga0450920_002075_690_2972 739
42 3300003791 Ga0055530_10002071 Ga0055530_100020715 740
43 3300025245 Ga0207425_1009805 Ga0207425_10098051 740
44 3300025292 Ga0209676_1001918 Ga0209676_10019182 740
45 3300025298 Ga0209050_1000829 Ga0209050_100082939 740
46 3300025299 Ga0209256_1000178 Ga0209256_10001788 740
47 3300025304 Ga0209257_1000065 Ga0209257_100006580 740
48 3300005328 Ga0070676_10002938 Ga0070676_100029381 741
49 3300005719 Ga0068861_100005096 Ga0068861_1000050962 741
50 3300014326 Ga0157380_10012239 Ga0157380_100122394 741
51 3300025304 Ga0209257_1000013 Ga0209257_1000013182 741
52 3300025907 Ga0207645_10005881 Ga0207645_100058811 741
53 3300025908 Ga0207643_10015455 Ga0207643_100154555 741
54 3300025933 Ga0207706_10033315 Ga0207706_100333155 741
55 3300026118 Ga0207675_100010023 Ga0207675_1000100232 741
56 3300027717 Ga0209998_10002340 Ga0209998_100023402 741
57 3300027876 Ga0209974_10001953 Ga0209974_100019538 741
58 3300049592 Ga0501076_0082665 Ga0501076_0082665_256_2535 742
59 3300006237 Ga0097621_100041398 Ga0097621_1000413981 743
60 3300006852 Ga0075433_10006654 Ga0075433_100066544 743
61 3300006871 Ga0075434_100002664 Ga0075434_1000026648 743
62 3300048927 Ga0496124_0080601 Ga0496124_0080601_218_2509 743
63 3300050512 nmdc:mga0n895_80436_c1 nmdc:mga0n895_80436_c1_813_3092 743
64 3300032004 Ga0307414_10002119 Ga0307414_100021194 745
65 3300041413 Ga0439465_0001784 Ga0439465_0001784_74_2380 745
66 3300003781 Ga0055536_1000568 Ga0055536_10005689 746
67 3300006051 Ga0075364_10048164 Ga0075364_100481641 746
68 3300025292 Ga0209676_1000196 Ga0209676_100019659 746
69 3300025299 Ga0209256_1001556 Ga0209256_100155619 746
70 3300025299 Ga0209256_1002926 Ga0209256_10029268 746
71 3300025304 Ga0209257_1000498 Ga0209257_100049852 746
72 3300025304 Ga0209257_1005061 Ga0209257_10050618 746
73 3300048905 Ga0496102_0087305 Ga0496102_0087305_221_2521 746
74 3300048911 Ga0496108_0065943 Ga0496108_0065943_685_2985 746
75 3300048917 Ga0496114_0029961 Ga0496114_0029961_545_2845 746
76 3300049571 Ga0501034_0000275 Ga0501034_0000275_63217_65523 746
77 3300049571 Ga0501034_0000882 Ga0501034_0000882_26063_28339 746
78 3300050491 nmdc:mga00v17_861_c1 nmdc:mga00v17_861_c1_9461_11758 746
79 3300031548 Ga0307408_100004210 Ga0307408_1000042107 748
80 3300031731 Ga0307405_10017186 Ga0307405_100171862 748
81 3300031824 Ga0307413_10020645 Ga0307413_100206452 748
82 3300031911 Ga0307412_10012237 Ga0307412_100122373 748
83 3300032004 Ga0307414_10011087 Ga0307414_100110873 748
84 3300032005 Ga0307411_10011977 Ga0307411_100119774 748
85 3300042435 Ga0439434_0003419 Ga0439434_0003419_806_3085 748
86 3300042436 Ga0439435_0000148 Ga0439435_0000148_4020_6299 748
87 3300042437 Ga0439444_0000013 Ga0439444_0000013_7678_9957 748
88 3300005937 Ga0081455_10001789 Ga0081455_1000178914 749
89 3300049573 Ga0501037_0007372 Ga0501037_0007372_2994_5273 749
90 3300049575 Ga0501039_0012146 Ga0501039_0012146_3273_5552 749
91 3300049591 Ga0501075_0002522 Ga0501075_0002522_9131_11410 749
92 3300005289 Ga0065704_10004750 Ga0065704_100047503 750
93 3300038443 Ga0395901_0001304 Ga0395901_0001304_9480_11753 752
94 3300049822 Ga0501035_0026198 Ga0501035_0026198_3004_5313 752
95 iso_pu_bacteria 2524614729 2525557178 752
96 iso_pu_bacteria 2627854209 2630648774 752
97 3300009094 Ga0111539_10014911 Ga0111539_100149113 753
98 3300009551 Ga0105238_10008767 Ga0105238_100087674 753
99 3300025940 Ga0207691_10010610 Ga0207691_100106102 753
100 3300046525 Ga0495663_0003196 Ga0495663_0003196_2044_4353 753
101 3300049568 Ga0501031_0000353 Ga0501031_0000353_11136_13439 753
102 3300049570 Ga0501033_0005310 Ga0501033_0005310_6936_9239 753
103 3300049823 Ga0501044_0000240 Ga0501044_0000240_58404_60707 753
104 3300050511 nmdc:mga08y16_45285_c1 nmdc:mga08y16_45285_c1_223_2490 753
105 iso_pu_bacteria 2895498888 2895499787 753
106 iso_pu_bacteria 2895511927 2895512763 753
107 iso_pu_bacteria 2895522137 2895522778 753
108 iso_pu_bacteria 2895525241 2895525448 753
109 3300005334 Ga0068869_100041100 Ga0068869_1000411001 754
110 3300005343 Ga0070687_100014418 Ga0070687_1000144182 754
111 3300005548 Ga0070665_100002087 Ga0070665_10000208720 754
112 3300005719 Ga0068861_100008983 Ga0068861_1000089838 754
113 3300005719 Ga0068861_100017364 Ga0068861_1000173642 754
114 3300013308 Ga0157375_10001308 Ga0157375_1000130816 754
115 3300025942 Ga0207689_10013653 Ga0207689_100136535 754
116 3300026075 Ga0207708_10027361 Ga0207708_100273612 754
117 3300026118 Ga0207675_100020439 Ga0207675_1000204395 754
118 3300031852 Ga0307410_10015145 Ga0307410_100151452 754
119 3300031901 Ga0307406_10017194 Ga0307406_100171944 754
120 3300032005 Ga0307411_10005845 Ga0307411_100058452 754
121 3300046460 Ga0495638_0001970 Ga0495638_0001970_3270_5540 754
122 3300046660 Ga0495625_0040924 Ga0495625_0040924_310_2583 754
123 iso_pu_bacteria 2643221577 2643894475 754
124 iso_pu_bacteria 2643221685 2644476652 754
125 iso_pu_bacteria 2895395659 2895396256 754
126 3300005293 Ga0065715_10089826 Ga0065715_100898266 755
127 3300005333 Ga0070677_10003845 Ga0070677_100038453 755
128 3300005344 Ga0070661_100004130 Ga0070661_1000041308 755
129 3300005347 Ga0070668_100039098 Ga0070668_1000390982 755
130 3300005353 Ga0070669_100016197 Ga0070669_1000161973 755
131 3300005354 Ga0070675_100001062 Ga0070675_1000010627 755
132 3300005354 Ga0070675_100005112 Ga0070675_1000051123 755
133 3300005354 Ga0070675_100055037 Ga0070675_1000550372 755
134 3300005356 Ga0070674_100044721 Ga0070674_1000447212 755
135 3300005364 Ga0070673_100010498 Ga0070673_1000104984 755
136 3300005365 Ga0070688_100006781 Ga0070688_1000067814 755
137 3300005367 Ga0070667_100030593 Ga0070667_1000305931 755
138 3300005438 Ga0070701_10014751 Ga0070701_100147512 755
139 3300005456 Ga0070678_100038320 Ga0070678_1000383202 755
140 3300005457 Ga0070662_100012419 Ga0070662_1000124192 755
141 3300005459 Ga0068867_100046290 Ga0068867_1000462902 755
142 3300005544 Ga0070686_100015199 Ga0070686_1000151992 755
143 3300005547 Ga0070693_100001324 Ga0070693_1000013248 755
144 3300005548 Ga0070665_100052207 Ga0070665_1000522072 755
145 3300005719 Ga0068861_100000583 Ga0068861_1000005834 755
146 3300005719 Ga0068861_100037580 Ga0068861_1000375802 755
147 3300005841 Ga0068863_100003493 Ga0068863_1000034938 755
148 3300005844 Ga0068862_100001251 Ga0068862_10000125121 755
149 3300005844 Ga0068862_100002071 Ga0068862_10000207112 755
150 3300005937 Ga0081455_10005324 Ga0081455_1000532412 755
151 3300009177 Ga0105248_10003969 Ga0105248_100039698 755
152 3300009553 Ga0105249_10033299 Ga0105249_100332994 755
153 3300014325 Ga0163163_10004087 Ga0163163_100040879 755
154 3300025893 Ga0207682_10002317 Ga0207682_100023175 755
155 3300025920 Ga0207649_10010889 Ga0207649_100108892 755
156 3300025923 Ga0207681_10003447 Ga0207681_100034472 755
157 3300025926 Ga0207659_10009303 Ga0207659_100093033 755
158 3300025936 Ga0207670_10012999 Ga0207670_100129993 755
159 3300025941 Ga0207711_10027794 Ga0207711_100277944 755
160 3300025942 Ga0207689_10013259 Ga0207689_100132592 755
161 3300025945 Ga0207679_10027738 Ga0207679_100277382 755
162 3300025972 Ga0207668_10006634 Ga0207668_100066344 755
163 3300026088 Ga0207641_10037275 Ga0207641_100372752 755
164 3300026089 Ga0207648_10020280 Ga0207648_100202802 755
165 3300026095 Ga0207676_10003279 Ga0207676_100032799 755
166 3300026118 Ga0207675_100000276 Ga0207675_10000027642 755
167 3300026118 Ga0207675_100061943 Ga0207675_1000619432 755
168 3300026121 Ga0207683_10011482 Ga0207683_100114824 755
169 3300028380 Ga0268265_10001654 Ga0268265_1000165416 755
170 3300032004 Ga0307414_10015632 Ga0307414_100156322 755
171 3300045051 Ga0451576_0080999 Ga0451576_0080999_951_3224 755
172 3300048909 Ga0496106_0023797 Ga0496106_0023797_27_2300 755
173 3300049583 Ga0501067_0012236 Ga0501067_0012236_1141_3417 755
174 3300049584 Ga0501068_0002877 Ga0501068_0002877_5476_7752 755
175 3300049586 Ga0501070_0023944 Ga0501070_0023944_2003_4279 755
176 3300049587 Ga0501071_0043021 Ga0501071_0043021_837_3113 755
177 3300049589 Ga0501073_0001686 Ga0501073_0001686_13435_15711 755
178 3300049590 Ga0501074_0000768 Ga0501074_0000768_16502_18778 755
179 3300049593 Ga0501077_0003186 Ga0501077_0003186_941_3217 755
180 3300049741 Ga0501079_0000385 Ga0501079_0000385_23551_25827 755
181 3300049742 Ga0501080_0000663 Ga0501080_0000663_4742_7018 755
182 3300054114 Ga0501084_0001297 Ga0501084_0001297_14655_16931 755
183 3300060353 Ga0501082_0028136 Ga0501082_0028136_1543_3819 755
184 3300005334 Ga0068869_100011222 Ga0068869_1000112222 756
185 3300005367 Ga0070667_100066992 Ga0070667_1000669921 756
186 3300006844 Ga0075428_100038625 Ga0075428_1000386253 756
187 3300009094 Ga0111539_10015438 Ga0111539_100154387 756
188 3300009176 Ga0105242_10014263 Ga0105242_100142633 756
189 3300013296 Ga0157374_10112679 Ga0157374_101126792 756
190 3300025292 Ga0209676_1003241 Ga0209676_10032414 756
191 3300025893 Ga0207682_10014243 Ga0207682_100142431 756
192 3300025942 Ga0207689_10010654 Ga0207689_100106544 756
193 3300025960 Ga0207651_10020119 Ga0207651_100201193 756
194 3300027907 Ga0207428_10023968 Ga0207428_100239683 756
195 3300032004 Ga0307414_10002843 Ga0307414_100028434 756
196 3300032004 Ga0307414_10004712 Ga0307414_100047124 756
197 3300050507 nmdc:mga05p37_17943_c1 nmdc:mga05p37_17943_c1_1756_4032 756
198 3300053156 Ga0500622_0005619 Ga0500622_0005619_1470_3746 756
199 3300031548 Ga0307408_100016367 Ga0307408_1000163672 757
200 3300042876 Ga0451577_0015721 Ga0451577_0015721_2865_5168 757
201 3300046539 Ga0495621_0000271 Ga0495621_0000271_8461_10854 757
202 3300025916 Ga0207663_10043473 Ga0207663_100434732 758
203 3300041494 Ga0451837_1010921 Ga0451837_1010921_680_3004 758
204 3300005339 Ga0070660_100022431 Ga0070660_1000224312 759
205 3300009987 Ga0105030_100040 Ga0105030_1000404 759
206 3300032004 Ga0307414_10024808 Ga0307414_100248082 759
207 3300049571 Ga0501034_0000544 Ga0501034_0000544_51800_54130 759
208 3300049583 Ga0501067_0025912 Ga0501067_0025912_893_3172 759
209 3300049589 Ga0501073_0001449 Ga0501073_0001449_13511_15790 759
210 3300060353 Ga0501082_0001756 Ga0501082_0001756_15857_18136 759
211 3300032004 Ga0307414_10008431 Ga0307414_100084312 760
212 3300041404 Ga0439436_0003484 Ga0439436_0003484_197_2527 760
213 3300041999 Ga0439433_0000792 Ga0439433_0000792_874_3204 760
214 3300042006 Ga0439432_002868 Ga0439432_002868_3233_5563 760
215 3300042007 Ga0439449_0013208 Ga0439449_0013208_742_3072 760
216 3300042010 Ga0439452_007267 Ga0439452_007267_402_2732 760
217 3300042156 Ga0439446_0005672 Ga0439446_0005672_374_2704 760
218 3300049587 Ga0501071_0050274 Ga0501071_0050274_478_2766 760
219 3300031730 Ga0307516_10039593 Ga0307516_100395933 762
220 3300005543 Ga0070672_100002084 Ga0070672_1000020845 767
221 3300025940 Ga0207691_10006611 Ga0207691_100066118 767
222 iso_pu_bacteria 2571042365 2572253637 767
223 iso_pu_bacteria 2643221586 2643941250 767
224 3300025931 Ga0207644_10066032 Ga0207644_100660321 774
225 2162886007 SwRhRL2b_contig_1279702 SwRhRL2b_0759.00004660 776
226 3300005289 Ga0065704_10000637 Ga0065704_100006372 776

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22085

NorB_cytochrome_c-like

Nitric oxide reductase subunit B, cytochrome c-like domain

60

256

0.94

PF00115

COX1

Cytochrome C and Quinol oxidase polypeptide I

319

749

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6qq6-assembly1.cif.gz_B cryo-em structure of dimeric quinol dependent nitric oxide reductase (qnor) val495ala mutant from alcaligenes xylosoxidans 0.9676 1 753
6qq6-assembly1.cif.gz_B cryo-em structure of dimeric quinol dependent nitric oxide reductase (qnor) val495ala mutant from alcaligenes xylosoxidans 0.9612 1 753
6l3h-assembly1.cif.gz_B cryo-em structure of dimeric quinol dependent nitric oxide reductase (qnor) from the pathogen neisseria meninigitidis 0.9611 5 755
8bgw-assembly1.cif.gz_B cryoem structure of quinol-dependent nitric oxide reductase (qnor) from alcaligenes xylosoxidans at 2.2 a resolution 0.9581 1 759
6qq5-assembly1.cif.gz_B cryo-em structure of dimeric quinol dependent nitric oxide reductase (qnor) from alcaligenes xylosoxidans 0.9565 1 753
ID Description Score Start End Superfamily
3aygA01 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9189 243 769 1.20.210.10
4xydA00 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9045 295 764 1.20.210.10
4xydA00 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.8948 295 764 1.20.210.10
3aygA01 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.8592 243 769 1.20.210.10
5djqA00 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.7664 293 754 1.20.210.10
ID Description Score Start End GO Terms
AF-A0A4U9KJ36-F1-model_v4 deleted 1.001 655 755
AF-A0A644ZSP1-F1-model_v4 Nitric oxide reductase subunit B 0.9977 655 755 GO:0016020
AF-A0A3D0WNX8-F1-model_v4 Nitric oxide reductase large subunit 0.9951 640 755 GO:0004129
GO:0009060
GO:0016020
GO:0020037
AF-A0A2T0LA85-F1-model_v4 PepSY-associated transmembrane protein 0.9833 661 755 GO:0016020
AF-A0A5E6NQG4-F1-model_v4 Nitric-oxide reductase (EC, quinol-dependent) (EC 1.7.99.7) 0.9759 286 523 GO:0004129
GO:0009060
GO:0016020
GO:0020037

Feature Viewer

pLDDT pTM Quality
87.73 0.88 High
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Predicted Structure (AlphaFold2)

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