F339206

General Info

Members Datasets Scaffolds Average Seq Length
226 173 452 286

Family's Representative Sequence

Representative Sequence 3300046616|Ga0495668_0003694|Ga0495668_0003694_6112_7065
Length 317
Sequence MVLDVKNNHLEGSFFVIIFDIKIVSFQIIIFMEKIIRPPSGWFMLIISLALLGYCGYVLAAMHTPLGVITGVAALLVFFIIIAGFIAVEPNSSRVLILFGKYCGTAKNSGFIWVNPFFTKRKISLRANNLDTKPVKVNDKQGNPIIIGAVVVWRVENTYKAAFDVDNYASFVVTQIESAIRKLAGHYNYDHFGEDTEEITLRSSADEVSELLEKEVSERLSLAGIHVIEARISHLAYAEEIAHAMLQRQQATAVVAARSKIVEGAVGMVEMALAELSKKSIVTLDEERKAQMVSNLMVVLCGDKTVQPVVNTGTIYQ

Samples

Sample ID Description Type Environment
1 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
5 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
9 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
10 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
11 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
12 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
13 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
14 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
37 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
38 3300009984 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_127 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
41 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
42 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
46 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
47 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
48 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
49 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
50 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
51 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
52 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
55 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
59 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027424 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
81 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
82 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
83 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
84 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
85 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
86 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
87 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
88 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
89 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
90 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
91 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
94 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
95 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
96 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
97 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
98 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
99 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
100 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
101 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
102 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
103 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
104 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
105 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
106 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
107 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
108 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
109 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
110 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
113 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
114 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
115 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
116 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
117 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
118 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
119 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
120 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
121 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
122 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
123 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
124 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
125 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
126 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
127 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
128 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
129 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
130 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
131 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
132 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
133 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
134 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
135 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
136 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
137 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
138 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
139 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
140 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
141 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
142 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
143 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
144 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
145 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
146 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
147 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
148 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
149 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
152 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
157 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
158 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
159 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
160 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
161 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
162 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
163 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
164 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
165 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
166 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
167 2643221695 Lysobacter sp. Root494 Isolate Unclassified
168 2739367700 Dyella sp. YR388 Isolate Unclassified
169 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
170 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
171 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
172 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
173 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.13
Metatranscriptomes 0
Isolates 4.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.57
Nodule 0
Rhizoplane 3.1
Rhizosphere 61.5
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495668_0003694 3300046616 Bacteria 11295
2 JGI25162J39368_1000558 3300002737 Bacteria 27440
3 JGI25152J39213_1000146 3300002773 Bacteria 48401
4 JGI25150J39212_1000120 3300002774 Bacteria 44029
5 JGI25151J46595_10000107 3300003187 Bacteria 113288
6 JGI25151J46595_10033127 3300003187 Bacteria 1994
7 JGI25153J46596_10000078 3300003215 Bacteria 113288
8 rootH1_10007253 3300003323 Bacteria 8226
9 Ga0055526_1018357 3300003771 Bacteria 2613
10 Ga0055524_1004874 3300003775 Bacteria 6099
11 Ga0055524_1016538 3300003775 Bacteria 2641
12 Ga0055536_1003913 3300003781 Bacteria 7813
13 Ga0055536_1007708 3300003781 Bacteria 4767
14 Ga0055530_10000975 3300003791 Bacteria 23186
15 Ga0055530_10004428 3300003791 Bacteria 7225
16 Ga0055531_10005760 3300003794 Bacteria 7176
17 Ga0055531_10018235 3300003794 Bacteria 2909
18 Ga0065704_10104183 3300005289 Bacteria 2149
19 Ga0065707_10082263 3300005295 Bacteria 18028
20 Ga0070658_10129765 3300005327 Bacteria 2100
21 Ga0070670_100001053 3300005331 Bacteria 21912
22 Ga0070666_10021461 3300005335 Bacteria 4187
23 Ga0070668_100000056 3300005347 Bacteria 70052
24 Ga0070669_100162189 3300005353 Bacteria 1738
25 Ga0070671_100000601 3300005355 Bacteria 25698
26 Ga0070671_100225134 3300005355 Bacteria 1591
27 Ga0070673_100437485 3300005364 Bacteria 1175
28 Ga0070667_100000215 3300005367 Bacteria 67317
29 Ga0070667_100238188 3300005367 Bacteria 1624
30 Ga0070663_100101427 3300005455 Bacteria 2148
31 Ga0070662_100144953 3300005457 Bacteria 1844
32 Ga0070664_100082982 3300005564 Bacteria 2764
33 Ga0068857_100012754 3300005577 Bacteria 7326
34 Ga0068852_100293381 3300005616 Bacteria 1572
35 Ga0068864_100002862 3300005618 Bacteria 14259
36 Ga0068864_100006135 3300005618 Bacteria 9859
37 Ga0068870_10025669 3300005840 Bacteria 2927
38 Ga0068863_100007196 3300005841 Bacteria 10916
39 Ga0068863_100251886 3300005841 Bacteria 1706
40 Ga0068858_100066505 3300005842 Bacteria 3337
41 Ga0068860_100000049 3300005843 Bacteria 208782
42 Ga0068862_100003039 3300005844 Bacteria 14609
43 Ga0111539_10716645 3300009094 Bacteria 1165
44 Ga0111539_10930493 3300009094 Bacteria 1011
45 Ga0105249_10240703 3300009553 Bacteria 1789
46 Ga0105148_101494 3300009978 Bacteria 1637
47 Ga0105032_100183 3300009979 Bacteria 6475
48 Ga0105029_103997 3300009984 Bacteria 1004
49 Ga0105246_10274781 3300011119 Bacteria 1349
50 Ga0157314_1001037 3300012500 Bacteria 2165
51 Ga0157373_10129838 3300013100 Bacteria 1772
52 Ga0157371_10003069 3300013102 Bacteria 15491
53 Ga0157370_10072456 3300013104 Bacteria 3250
54 Ga0157378_10116299 3300013297 Bacteria 2459
55 Ga0182008_10000880 3300014497 Bacteria 20870
56 Ga0157379_10402800 3300014968 Bacteria 1258
57 Ga0182007_10000099 3300015262 Bacteria 60975
58 Ga0182005_1000334 3300015265 Bacteria 27479
59 Ga0163161_10001792 3300017792 Bacteria 15674
60 Ga0207425_1000028 3300025245 Bacteria 286333
61 Ga0209129_1000065 3300025258 Bacteria 232568
62 Ga0209565_1000209 3300025263 Bacteria 68237
63 Ga0209673_1017941 3300025273 Bacteria 2592
64 Ga0209130_1006676 3300025284 Bacteria 3701
65 Ga0209676_1000034 3300025292 Bacteria 460125
66 Ga0209676_1000540 3300025292 Bacteria 58505
67 Ga0209676_1002244 3300025292 Bacteria 14280
68 Ga0209676_1002785 3300025292 Bacteria 11606
69 Ga0209676_1003295 3300025292 Bacteria 10118
70 Ga0209676_1004586 3300025292 Bacteria 7632
71 Ga0209676_1004740 3300025292 Bacteria 7435
72 Ga0209025_1000002 3300025294 Bacteria 1393142
73 Ga0209025_1006700 3300025294 Bacteria 8842
74 Ga0209025_1043550 3300025294 Bacteria 1889
75 Ga0209564_1001949 3300025295 Bacteria 18260
76 Ga0209564_1006086 3300025295 Bacteria 6637
77 Ga0209758_1000003 3300025297 Bacteria 1398533
78 Ga0209758_1015592 3300025297 Bacteria 3922
79 Ga0209050_1000001 3300025298 Bacteria 3563507
80 Ga0209050_1000707 3300025298 Bacteria 49453
81 Ga0209050_1000998 3300025298 Bacteria 35642
82 Ga0209050_1005281 3300025298 Bacteria 8218
83 Ga0209050_1005756 3300025298 Bacteria 7644
84 Ga0209256_1003748 3300025299 Bacteria 10273
85 Ga0209256_1008258 3300025299 Bacteria 4873
86 Ga0209256_1015084 3300025299 Bacteria 2727
87 Ga0209051_1000357 3300025303 Bacteria 67596
88 Ga0209257_1000133 3300025304 Bacteria 208808
89 Ga0209257_1000500 3300025304 Bacteria 70060
90 Ga0209257_1004990 3300025304 Bacteria 9685
91 Ga0209257_1005537 3300025304 Bacteria 8802
92 Ga0207643_10104469 3300025908 Bacteria 1664
93 Ga0207705_10367414 3300025909 Bacteria 1110
94 Ga0207649_10329772 3300025920 Bacteria 1124
95 Ga0207706_10214797 3300025933 Bacteria 1685
96 Ga0207691_10196218 3300025940 Bacteria 1759
97 Ga0207711_10214247 3300025941 Bacteria 1760
98 Ga0207661_10194313 3300025944 Bacteria 1781
99 Ga0207658_10040351 3300025986 Bacteria 3374
100 Ga0207639_10162015 3300026041 Bacteria 1886
101 Ga0207678_10095897 3300026067 Bacteria 2535
102 Ga0207641_10000545 3300026088 Bacteria 42249
103 Ga0207641_10234907 3300026088 Bacteria 1706
104 Ga0207676_10001939 3300026095 Bacteria 15104
105 Ga0207676_10260536 3300026095 Bacteria 1565
106 Ga0207674_10023722 3300026116 Bacteria 6566
107 Ga0207675_100127139 3300026118 Bacteria 2415
108 Ga0207698_10111943 3300026142 Bacteria 2290
109 Ga0209984_1004471 3300027424 Bacteria 1649
110 Ga0209983_1002676 3300027665 Bacteria 3865
111 Ga0209974_10006070 3300027876 Bacteria 4229
112 Ga0316182_1026813 3300030745 Bacteria 1783
113 Ga0307513_10015185 3300031456 Bacteria 9346
114 Ga0307408_100158465 3300031548 Bacteria 1795
115 Ga0307508_10012835 3300031616 Bacteria 7660
116 Ga0316575_10042008 3300031665 Bacteria 1810
117 Ga0316578_10015683 3300031728 Bacteria 4081
118 Ga0307405_10085197 3300031731 Bacteria 2077
119 Ga0316577_10022188 3300031733 Bacteria 3525
120 Ga0307413_10119926 3300031824 Bacteria 1779
121 Ga0307410_10242499 3300031852 Bacteria 1397
122 Ga0307406_10422946 3300031901 Bacteria 1062
123 Ga0307416_100708380 3300032002 Bacteria 1096
124 Ga0307414_10015704 3300032004 Bacteria 4578
125 Ga0307414_10030075 3300032004 Bacteria 3544
126 Ga0307414_10422682 3300032004 Bacteria 1162
127 Ga0307411_10001055 3300032005 Bacteria 10676
128 Ga0307411_10185273 3300032005 Bacteria 1584
129 Ga0307415_100062894 3300032126 Bacteria 2577
130 Ga0307415_100089188 3300032126 Bacteria 2227
131 Ga0316580_10024353 3300032139 Bacteria 1871
132 Ga0373938_0011445 3300034957 Bacteria 1650
133 Ga0316574_0024690 3300035398 Bacteria 3600
134 Ga0373931_0006743 3300035691 Bacteria 5389
135 Ga0373935_0200711 3300035692 Bacteria 1378
136 Ga0373927_0092306 3300035695 Bacteria 1967
137 Ga0373927_0134068 3300035695 Bacteria 1618
138 Ga0373925_0080927 3300037068 Bacteria 2469
139 Ga0237819_00475 3300038705 Bacteria 13629
140 Ga0237819_06057 3300038705 Bacteria 1846
141 Ga0439436_0010419 3300041404 Bacteria 2835
142 Ga0439439_0008809 3300041406 Bacteria 2388
143 Ga0439465_0001469 3300041413 Bacteria 7639
144 Ga0439465_0001903 3300041413 Bacteria 6836
145 Ga0439465_0008618 3300041413 Bacteria 3217
146 Ga0451843_1385746 3300041509 Bacteria 1391
147 Ga0439449_0004025 3300042007 Bacteria 5688
148 Ga0439449_0007900 3300042007 Bacteria 4039
149 Ga0439462_0005719 3300042015 Bacteria 3073
150 Ga0439440_0007928 3300042993 Bacteria 2169
151 Ga0451576_0032091 3300045051 Bacteria 5597
152 Ga0495627_000425 3300046453 Bacteria 36660
153 Ga0495638_0000065 3300046460 Bacteria 170849
154 Ga0495638_0002252 3300046460 Bacteria 15992
155 Ga0495650_0000652 3300046471 Bacteria 45732
156 Ga0495662_0000337 3300046476 Bacteria 20513
157 Ga0495594_0295424 3300046499 Bacteria 923
158 Ga0495610_0000033 3300046512 Bacteria 204151
159 Ga0495620_0005864 3300046515 Bacteria 6817
160 Ga0495630_0000008 3300046517 Bacteria 337046
161 Ga0495663_0001598 3300046525 Bacteria 7087
162 Ga0495666_0055439 3300046526 Bacteria 1899
163 Ga0495665_0094074 3300046531 Bacteria 1575
164 Ga0495586_0087727 3300046535 Bacteria 1715
165 Ga0495621_0097016 3300046539 Bacteria 1117
166 Ga0495656_0002467 3300046615 Bacteria 6152
167 Ga0495647_0045360 3300046681 Bacteria 1688
168 Ga0495658_0094637 3300046683 Bacteria 1774
169 Ga0495670_0166605 3300046691 Bacteria 1159
170 Ga0495636_0096685 3300047318 Bacteria 1287
171 Ga0495676_0171678 3300047321 Bacteria 1526
172 Ga0495681_0000041 3300047470 Bacteria 119251
173 Ga0495686_0000262 3300047472 Bacteria 94462
174 Ga0495686_0013408 3300047472 Bacteria 5685
175 Ga0495615_0019122 3300048090 Bacteria 1517
176 Ga0496101_0152231 3300048904 Bacteria 1770
177 Ga0496103_0211563 3300048906 Bacteria 1247
178 Ga0496108_0264595 3300048911 Bacteria 1496
179 Ga0496109_0024261 3300048912 Bacteria 5390
180 Ga0496111_0315748 3300048914 Bacteria 1157
181 Ga0496114_0008248 3300048917 Bacteria 8256
182 Ga0496115_0016397 3300048918 Bacteria 5642
183 Ga0496117_0003906 3300048920 Bacteria 16886
184 Ga0496118_0002535 3300048921 Bacteria 24467
185 Ga0496119_0000979 3300048922 Bacteria 36683
186 Ga0496120_0001049 3300048923 Bacteria 36674
187 Ga0496121_0000335 3300048924 Bacteria 98310
188 Ga0496121_0009191 3300048924 Bacteria 11425
189 Ga0496122_0001370 3300048925 Bacteria 39655
190 Ga0496122_0019562 3300048925 Bacteria 6176
191 Ga0496123_0001175 3300048926 Bacteria 38651
192 Ga0496123_0006027 3300048926 Bacteria 11926
193 Ga0496124_0002618 3300048927 Bacteria 23190
194 Ga0496124_0011000 3300048927 Bacteria 9089
195 Ga0496124_0013431 3300048927 Bacteria 7991
196 Ga0496125_0012964 3300048928 Bacteria 8229
197 Ga0496125_0015734 3300048928 Bacteria 7294
198 Ga0496125_0023202 3300048928 Bacteria 5734
199 Ga0496125_0031349 3300048928 Bacteria 4739
200 Ga0496126_0007275 3300048929 Bacteria 12168
201 Ga0501300_006206 3300049523 Bacteria 1763
202 Ga0501031_0064486 3300049568 Bacteria 2386
203 Ga0501033_0124014 3300049570 Bacteria 1873
204 Ga0501034_0000853 3300049571 Bacteria 45135
205 Ga0501034_0013190 3300049571 Bacteria 8511
206 Ga0501034_0038782 3300049571 Bacteria 4825
207 Ga0501043_0000628 3300049579 Bacteria 31174
208 Ga0501275_000514 3300049772 Bacteria 4344
209 Ga0501044_0062431 3300049823 Bacteria 3808
210 Ga0501044_0094100 3300049823 Bacteria 3021
211 nmdc:mga0k408_247537_c1 3300050493 Bacteria 1064
212 nmdc:mga08y16_815085_c1 3300050511 Bacteria 925
213 Ga0500566_0005221 3300053094 Bacteria 7733
214 Ga0500595_006368 3300053119 Bacteria 5015
215 Ga0500616_0001805 3300053153 Bacteria 19482
216 2572256285 2571042365 Bacteria 3289345
217 2578459182 2576861471 Bacteria 4648976
218 2643908950 2643221579 Bacteria 4443405
219 2643915509 2643221581 Bacteria 3893603
220 2644528608 2643221695 Bacteria 3441323
221 2739730401 2739367700 Bacteria 4747630
222 2765578134 2765235840 Bacteria 4663337
223 2791912935 2791354901 Bacteria 8322202
224 2852651540 2852649853 Bacteria 4036942
225 2939625093 2939622612 Bacteria 4698046
226 8003016424 8003014200 Bacteria 4059994
227 Ga0495668_0003694
228 JGI25162J39368_1000558
229 JGI25152J39213_1000146
230 JGI25150J39212_1000120
231 JGI25151J46595_10000107
232 JGI25151J46595_10033127
233 JGI25153J46596_10000078
234 rootH1_10007253
235 Ga0055526_1018357
236 Ga0055524_1004874
237 Ga0055524_1016538
238 Ga0055536_1003913
239 Ga0055536_1007708
240 Ga0055530_10000975
241 Ga0055530_10004428
242 Ga0055531_10005760
243 Ga0055531_10018235
244 Ga0065704_10104183
245 Ga0065707_10082263
246 Ga0070658_10129765
247 Ga0070670_100001053
248 Ga0070666_10021461
249 Ga0070668_100000056
250 Ga0070669_100162189
251 Ga0070671_100000601
252 Ga0070671_100225134
253 Ga0070673_100437485
254 Ga0070667_100000215
255 Ga0070667_100238188
256 Ga0070663_100101427
257 Ga0070662_100144953
258 Ga0070664_100082982
259 Ga0068857_100012754
260 Ga0068852_100293381
261 Ga0068864_100002862
262 Ga0068864_100006135
263 Ga0068870_10025669
264 Ga0068863_100007196
265 Ga0068863_100251886
266 Ga0068858_100066505
267 Ga0068860_100000049
268 Ga0068862_100003039
269 Ga0111539_10716645
270 Ga0111539_10930493
271 Ga0105249_10240703
272 Ga0105148_101494
273 Ga0105032_100183
274 Ga0105029_103997
275 Ga0105246_10274781
276 Ga0157314_1001037
277 Ga0157373_10129838
278 Ga0157371_10003069
279 Ga0157370_10072456
280 Ga0157378_10116299
281 Ga0182008_10000880
282 Ga0157379_10402800
283 Ga0182007_10000099
284 Ga0182005_1000334
285 Ga0163161_10001792
286 Ga0207425_1000028
287 Ga0209129_1000065
288 Ga0209565_1000209
289 Ga0209673_1017941
290 Ga0209130_1006676
291 Ga0209676_1000034
292 Ga0209676_1000540
293 Ga0209676_1002244
294 Ga0209676_1002785
295 Ga0209676_1003295
296 Ga0209676_1004586
297 Ga0209676_1004740
298 Ga0209025_1000002
299 Ga0209025_1006700
300 Ga0209025_1043550
301 Ga0209564_1001949
302 Ga0209564_1006086
303 Ga0209758_1000003
304 Ga0209758_1015592
305 Ga0209050_1000001
306 Ga0209050_1000707
307 Ga0209050_1000998
308 Ga0209050_1005281
309 Ga0209050_1005756
310 Ga0209256_1003748
311 Ga0209256_1008258
312 Ga0209256_1015084
313 Ga0209051_1000357
314 Ga0209257_1000133
315 Ga0209257_1000500
316 Ga0209257_1004990
317 Ga0209257_1005537
318 Ga0207643_10104469
319 Ga0207705_10367414
320 Ga0207649_10329772
321 Ga0207706_10214797
322 Ga0207691_10196218
323 Ga0207711_10214247
324 Ga0207661_10194313
325 Ga0207658_10040351
326 Ga0207639_10162015
327 Ga0207678_10095897
328 Ga0207641_10000545
329 Ga0207641_10234907
330 Ga0207676_10001939
331 Ga0207676_10260536
332 Ga0207674_10023722
333 Ga0207675_100127139
334 Ga0207698_10111943
335 Ga0209984_1004471
336 Ga0209983_1002676
337 Ga0209974_10006070
338 Ga0316182_1026813
339 Ga0307513_10015185
340 Ga0307408_100158465
341 Ga0307508_10012835
342 Ga0316575_10042008
343 Ga0316578_10015683
344 Ga0307405_10085197
345 Ga0316577_10022188
346 Ga0307413_10119926
347 Ga0307410_10242499
348 Ga0307406_10422946
349 Ga0307416_100708380
350 Ga0307414_10015704
351 Ga0307414_10030075
352 Ga0307414_10422682
353 Ga0307411_10001055
354 Ga0307411_10185273
355 Ga0307415_100062894
356 Ga0307415_100089188
357 Ga0316580_10024353
358 Ga0373938_0011445
359 Ga0316574_0024690
360 Ga0373931_0006743
361 Ga0373935_0200711
362 Ga0373927_0092306
363 Ga0373927_0134068
364 Ga0373925_0080927
365 Ga0237819_00475
366 Ga0237819_06057
367 Ga0439436_0010419
368 Ga0439439_0008809
369 Ga0439465_0001469
370 Ga0439465_0001903
371 Ga0439465_0008618
372 Ga0451843_1385746
373 Ga0439449_0004025
374 Ga0439449_0007900
375 Ga0439462_0005719
376 Ga0439440_0007928
377 Ga0451576_0032091
378 Ga0495627_000425
379 Ga0495638_0000065
380 Ga0495638_0002252
381 Ga0495650_0000652
382 Ga0495662_0000337
383 Ga0495594_0295424
384 Ga0495610_0000033
385 Ga0495620_0005864
386 Ga0495630_0000008
387 Ga0495663_0001598
388 Ga0495666_0055439
389 Ga0495665_0094074
390 Ga0495586_0087727
391 Ga0495621_0097016
392 Ga0495656_0002467
393 Ga0495647_0045360
394 Ga0495658_0094637
395 Ga0495670_0166605
396 Ga0495636_0096685
397 Ga0495676_0171678
398 Ga0495681_0000041
399 Ga0495686_0000262
400 Ga0495686_0013408
401 Ga0495615_0019122
402 Ga0496101_0152231
403 Ga0496103_0211563
404 Ga0496108_0264595
405 Ga0496109_0024261
406 Ga0496111_0315748
407 Ga0496114_0008248
408 Ga0496115_0016397
409 Ga0496117_0003906
410 Ga0496118_0002535
411 Ga0496119_0000979
412 Ga0496120_0001049
413 Ga0496121_0000335
414 Ga0496121_0009191
415 Ga0496122_0001370
416 Ga0496122_0019562
417 Ga0496123_0001175
418 Ga0496123_0006027
419 Ga0496124_0002618
420 Ga0496124_0011000
421 Ga0496124_0013431
422 Ga0496125_0012964
423 Ga0496125_0015734
424 Ga0496125_0023202
425 Ga0496125_0031349
426 Ga0496126_0007275
427 Ga0501300_006206
428 Ga0501031_0064486
429 Ga0501033_0124014
430 Ga0501034_0000853
431 Ga0501034_0013190
432 Ga0501034_0038782
433 Ga0501043_0000628
434 Ga0501275_000514
435 Ga0501044_0062431
436 Ga0501044_0094100
437 nmdc:mga0k408_247537_c1
438 nmdc:mga08y16_815085_c1
439 Ga0500566_0005221
440 Ga0500595_006368
441 Ga0500616_0001805
442 2572256285
443 2578459182
444 2643908950
445 2643915509
446 2644528608
447 2739730401
448 2765578134
449 2791912935
450 2852651540
451 2939625093
452 8003016424

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01145

Band_7

SPFH domain / Band 7 family

86

265

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
8gn9-assembly1.cif.gz_A-2 spfh domain of pyrococcus horikoshii stomatin 0.8545 101 211
4fvj-assembly2.cif.gz_B spfh domain of the mouse stomatin (crystal form 2) 0.8535 98 212
8gn9-assembly1.cif.gz_A-2 spfh domain of pyrococcus horikoshii stomatin 0.8322 101 211
4fvj-assembly2.cif.gz_B spfh domain of the mouse stomatin (crystal form 2) 0.8066 98 212
2rpb-assembly1.cif.gz_A the solution structure of membrane protein 0.7564 98 206
ID Description Score Start End Superfamily
af_Q8T4B6_101_212_3.30.479.30 Alpha Beta;2-Layer Sandwich;Tetrahydropterin Synthase; Chain A;Band 7 domain 0.8698 98 206 3.30.479.30
af_Q9VGD7_116_226_3.30.479.30 Alpha Beta;2-Layer Sandwich;Tetrahydropterin Synthase; Chain A;Band 7 domain 0.8646 96 212 3.30.479.30
af_Q8K4G9_162_272_3.30.479.30 Alpha Beta;2-Layer Sandwich;Tetrahydropterin Synthase; Chain A;Band 7 domain 0.8563 98 206 3.30.479.30
af_F1Q9K0_120_233_3.30.479.30 Alpha Beta;2-Layer Sandwich;Tetrahydropterin Synthase; Chain A;Band 7 domain 0.852 96 206 3.30.479.30
af_F1R5A4_90_200_3.30.479.30 Alpha Beta;2-Layer Sandwich;Tetrahydropterin Synthase; Chain A;Band 7 domain 0.8512 98 212 3.30.479.30
ID Description Score Start End GO Terms
AF-A0A7Y3HBW7-F1-model_v4 SPFH domain-containing protein 0.9397 1 209 GO:0016020
AF-A0A3B8YS12-F1-model_v4 Band 7 protein 0.939 3 101 GO:0016020
AF-A0A7Y3HBW7-F1-model_v4 SPFH domain-containing protein 0.931 1 209 GO:0016020
AF-A0A496URU6-F1-model_v4 SPFH domain-containing protein 0.9124 2 121 GO:0016020
AF-A0A661DWU5-F1-model_v4 SPFH domain-containing protein 0.9061 14 219 GO:0016020

Map